Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0109590 | Msa1167260 | 0.802613 | 5.162148e-49 | -8.615850e-47 |
| Msa0715410 | Msa1167260 | 0.802420 | 5.658954e-49 | -8.615850e-47 |
| Msa0771580 | Msa1167260 | 0.801157 | 1.027994e-48 | -8.615850e-47 |
| Msa0482180 | Msa1167260 | 0.804043 | 2.610930e-49 | -8.615850e-47 |
| Msa0244140 | Msa1167260 | 0.807852 | 4.127753e-50 | -8.615850e-47 |
| Msa0340690 | Msa1167260 | 0.801442 | 8.985273e-49 | -8.615850e-47 |
| Msa0340710 | Msa1167260 | 0.800949 | 1.133512e-48 | -8.615850e-47 |
| Msa1167260 | Msa1258370 | 0.811554 | 6.605977e-51 | -8.615850e-47 |
| Msa1167260 | Msa1270660 | 0.806496 | 7.996177e-50 | -8.615850e-47 |
| Msa1167260 | Msa1355890 | 0.816644 | 4.973185e-52 | -8.615850e-47 |
| Msa0587190 | Msa1167260 | 0.803423 | 3.510968e-49 | -8.615850e-47 |
| Msa0932100 | Msa1167260 | 0.803709 | 3.063050e-49 | -8.615850e-47 |
| Msa0970230 | Msa1167260 | 0.806041 | 9.970591e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 9 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGGTCCATTACAGTCTT+TGG | 0.234787 | 7_4:+59631536 | None:intergenic |
| TGGAAAATTGATGAAGTTAT+AGG | 0.338172 | 7_4:-59631207 | Msa1167260:CDS |
| ACAAGAACACGTGGTCGTTC+TGG | 0.372331 | 7_4:+59631519 | None:intergenic |
| TCGTAAACTTGATCGATTCA+AGG | 0.493360 | 7_4:+59631560 | None:intergenic |
| AAACCAATTAAGTTAAACCT+TGG | 0.519147 | 7_4:-59631264 | Msa1167260:intron |
| AGTGATCGATGCTTTCGCTA+TGG | 0.552138 | 7_4:-59631232 | Msa1167260:CDS |
| TTACGAGCCAAAGACTGTAA+TGG | 0.558304 | 7_4:-59631543 | Msa1167260:CDS |
| TCGATGCTTTCGCTATGGAA+TGG | 0.589535 | 7_4:-59631227 | Msa1167260:CDS |
| CGATCACTAATTCATTACCA+AGG | 0.607879 | 7_4:+59631247 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTAAAATATATT+TGG | - | chr7_4:59631560-59631579 | Msa1167260:CDS | 0.0% |
| !!! | ATTTTTTTTTAAAATATATT+TGG | - | chr7_4:59631560-59631579 | Msa1167260:CDS | 0.0% |
| !!! | TATATATTTTTTTTACTTCA+TGG | - | chr7_4:59631251-59631270 | Msa1167260:CDS | 10.0% |
| !!! | TTTTTTAAAATATATTTGGT+TGG | - | chr7_4:59631564-59631583 | Msa1167260:CDS | 10.0% |
| !! | TATAAATATAAACAATCATA+AGG | + | chr7_4:59631661-59631680 | None:intergenic | 10.0% |
| !!! | TATATATTTTTTTTACTTCA+TGG | - | chr7_4:59631251-59631270 | Msa1167260:CDS | 10.0% |
| !!! | TTTTTTAAAATATATTTGGT+TGG | - | chr7_4:59631564-59631583 | Msa1167260:CDS | 10.0% |
| !! | TATAAATATAAACAATCATA+AGG | + | chr7_4:59631661-59631680 | None:intergenic | 10.0% |
| !! | TGTTTCTTATTATAATTCTT+TGG | - | chr7_4:59631295-59631314 | Msa1167260:intron | 15.0% |
| !!! | TTTCTTTTTTTTAAGAAGAA+AGG | - | chr7_4:59631348-59631367 | Msa1167260:intron | 15.0% |
| !! | TTAAGTGAAAAAGAAAATTA+TGG | - | chr7_4:59631767-59631786 | Msa1167260:intron | 15.0% |
| !!! | TTTCTCATAAATAACTTTTT+TGG | - | chr7_4:59632337-59632356 | Msa1167260:intron | 15.0% |
| !! | TGTTTCTTATTATAATTCTT+TGG | - | chr7_4:59631295-59631314 | Msa1167260:intron | 15.0% |
| !!! | TTTCTTTTTTTTAAGAAGAA+AGG | - | chr7_4:59631348-59631367 | Msa1167260:intron | 15.0% |
| !! | TTAAGTGAAAAAGAAAATTA+TGG | - | chr7_4:59631767-59631786 | Msa1167260:intron | 15.0% |
| !!! | TTTCTCATAAATAACTTTTT+TGG | - | chr7_4:59632337-59632356 | Msa1167260:intron | 15.0% |
| !! | AATACTAAGAGAAATTATAC+AGG | - | chr7_4:59631457-59631476 | Msa1167260:intron | 20.0% |
| !! | AGAAAAATTATAGCTTAACA+AGG | + | chr7_4:59631727-59631746 | None:intergenic | 20.0% |
| !!! | TAATATTTTTATTGGAGTGA+TGG | + | chr7_4:59631918-59631937 | None:intergenic | 20.0% |
| !! | ATTTACCATATGTATAAACA+AGG | + | chr7_4:59632399-59632418 | None:intergenic | 20.0% |
| !! | TGTTTATACATATGGTAAAT+TGG | - | chr7_4:59632399-59632418 | Msa1167260:intron | 20.0% |
| !! | GTTTATACATCTAAATGATA+TGG | + | chr7_4:59632523-59632542 | None:intergenic | 20.0% |
| !!! | CACAATAATTTGAGTTATAT+TGG | - | chr7_4:59632797-59632816 | Msa1167260:intron | 20.0% |
| !! | AATACTAAGAGAAATTATAC+AGG | - | chr7_4:59631457-59631476 | Msa1167260:intron | 20.0% |
| !! | AGAAAAATTATAGCTTAACA+AGG | + | chr7_4:59631727-59631746 | None:intergenic | 20.0% |
| !!! | TAATATTTTTATTGGAGTGA+TGG | + | chr7_4:59631918-59631937 | None:intergenic | 20.0% |
| !! | ATTTACCATATGTATAAACA+AGG | + | chr7_4:59632399-59632418 | None:intergenic | 20.0% |
| !! | TGTTTATACATATGGTAAAT+TGG | - | chr7_4:59632399-59632418 | Msa1167260:intron | 20.0% |
| !! | GTTTATACATCTAAATGATA+TGG | + | chr7_4:59632523-59632542 | None:intergenic | 20.0% |
| !!! | CACAATAATTTGAGTTATAT+TGG | - | chr7_4:59632797-59632816 | Msa1167260:intron | 20.0% |
| !! | TTTTTACTTCATGGTCTTTT+TGG | - | chr7_4:59631260-59631279 | Msa1167260:intron | 25.0% |
| !!! | TTTTTTTTAAGAAGAAAGGC+TGG | - | chr7_4:59631352-59631371 | Msa1167260:intron | 25.0% |
| !! | AATAAGAAAGAGTATAGTTC+TGG | + | chr7_4:59631391-59631410 | None:intergenic | 25.0% |
| ! | TTCAATCATAAATATTGAGC+AGG | - | chr7_4:59631615-59631634 | Msa1167260:intron | 25.0% |
| ! | GTATATGTGCTTATAGAAAA+GGG | - | chr7_4:59631789-59631808 | Msa1167260:intron | 25.0% |
| ! | TATATGTGCTTATAGAAAAG+GGG | - | chr7_4:59631790-59631809 | Msa1167260:intron | 25.0% |
| ! | TCAATGTAACAGAAATTCTA+TGG | + | chr7_4:59632206-59632225 | None:intergenic | 25.0% |
| ! | TAGAATTTCTGTTACATTGA+CGG | - | chr7_4:59632206-59632225 | Msa1167260:intron | 25.0% |
| ! | TGATTGTCTGTAAAAATACT+AGG | - | chr7_4:59632248-59632267 | Msa1167260:intron | 25.0% |
| !! | GATTACCTTGTTTATACATA+TGG | - | chr7_4:59632391-59632410 | Msa1167260:intron | 25.0% |
| ! | TTACAAGATATTCCGAAAAA+AGG | - | chr7_4:59632550-59632569 | Msa1167260:intron | 25.0% |
| ! | TACAAGATATTCCGAAAAAA+GGG | - | chr7_4:59632551-59632570 | Msa1167260:intron | 25.0% |
| !! | AGTTACTTTAATTAGAGCAA+AGG | - | chr7_4:59632589-59632608 | Msa1167260:intron | 25.0% |
| ! | AAACCAATTAAGTTAAACCT+TGG | - | chr7_4:59632976-59632995 | Msa1167260:intron | 25.0% |
| !! | TTACCAAGGTTTAACTTAAT+TGG | + | chr7_4:59632982-59633001 | None:intergenic | 25.0% |
| ! | TGGAAAATTGATGAAGTTAT+AGG | - | chr7_4:59633033-59633052 | Msa1167260:intron | 25.0% |
| !! | TTTTTACTTCATGGTCTTTT+TGG | - | chr7_4:59631260-59631279 | Msa1167260:intron | 25.0% |
| !!! | TTTTTTTTAAGAAGAAAGGC+TGG | - | chr7_4:59631352-59631371 | Msa1167260:intron | 25.0% |
| !! | AATAAGAAAGAGTATAGTTC+TGG | + | chr7_4:59631391-59631410 | None:intergenic | 25.0% |
| ! | TTCAATCATAAATATTGAGC+AGG | - | chr7_4:59631615-59631634 | Msa1167260:intron | 25.0% |
| ! | GTATATGTGCTTATAGAAAA+GGG | - | chr7_4:59631789-59631808 | Msa1167260:intron | 25.0% |
| ! | TATATGTGCTTATAGAAAAG+GGG | - | chr7_4:59631790-59631809 | Msa1167260:intron | 25.0% |
| ! | TCAATGTAACAGAAATTCTA+TGG | + | chr7_4:59632206-59632225 | None:intergenic | 25.0% |
| ! | TAGAATTTCTGTTACATTGA+CGG | - | chr7_4:59632206-59632225 | Msa1167260:intron | 25.0% |
| ! | TGATTGTCTGTAAAAATACT+AGG | - | chr7_4:59632248-59632267 | Msa1167260:intron | 25.0% |
| !! | GATTACCTTGTTTATACATA+TGG | - | chr7_4:59632391-59632410 | Msa1167260:intron | 25.0% |
| ! | TTACAAGATATTCCGAAAAA+AGG | - | chr7_4:59632550-59632569 | Msa1167260:intron | 25.0% |
| ! | TACAAGATATTCCGAAAAAA+GGG | - | chr7_4:59632551-59632570 | Msa1167260:intron | 25.0% |
| !! | AGTTACTTTAATTAGAGCAA+AGG | - | chr7_4:59632589-59632608 | Msa1167260:intron | 25.0% |
| ! | AAACCAATTAAGTTAAACCT+TGG | - | chr7_4:59632976-59632995 | Msa1167260:intron | 25.0% |
| !! | TTACCAAGGTTTAACTTAAT+TGG | + | chr7_4:59632982-59633001 | None:intergenic | 25.0% |
| ! | TGGAAAATTGATGAAGTTAT+AGG | - | chr7_4:59633033-59633052 | Msa1167260:intron | 25.0% |
| TAACAAGGACAAAACAACAT+TGG | + | chr7_4:59631712-59631731 | None:intergenic | 30.0% | |
| GGTATATGTGCTTATAGAAA+AGG | - | chr7_4:59631788-59631807 | Msa1167260:intron | 30.0% | |
| AATGCATCATATGACAACAA+TGG | - | chr7_4:59631862-59631881 | Msa1167260:intron | 30.0% | |
| !! | ATTTTTATTGGAGTGATGGA+TGG | + | chr7_4:59631914-59631933 | None:intergenic | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | - | chr7_4:59631999-59632018 | Msa1167260:intron | 30.0% | |
| TGTTACGCTTATAACAAGAT+AGG | - | chr7_4:59632023-59632042 | Msa1167260:intron | 30.0% | |
| ! | GATGAATTGATGATACTATG+AGG | - | chr7_4:59632079-59632098 | Msa1167260:intron | 30.0% |
| TCTATAGCAGAATCATATAG+TGG | - | chr7_4:59632467-59632486 | Msa1167260:intron | 30.0% | |
| ATATTCCGAAAAAAGGGTTA+AGG | - | chr7_4:59632557-59632576 | Msa1167260:intron | 30.0% | |
| TATTCCGAAAAAAGGGTTAA+GGG | - | chr7_4:59632558-59632577 | Msa1167260:intron | 30.0% | |
| TTGTTCTTATGTTCACATTC+AGG | - | chr7_4:59632625-59632644 | Msa1167260:intron | 30.0% | |
| TGTTCTTATGTTCACATTCA+GGG | - | chr7_4:59632626-59632645 | Msa1167260:intron | 30.0% | |
| ATTTATTCAACAAGAACACG+TGG | + | chr7_4:59632733-59632752 | None:intergenic | 30.0% | |
| AGGCAAATTGGAAATAGTAT+TGG | - | chr7_4:59632837-59632856 | Msa1167260:intron | 30.0% | |
| TAACAAGGACAAAACAACAT+TGG | + | chr7_4:59631712-59631731 | None:intergenic | 30.0% | |
| GGTATATGTGCTTATAGAAA+AGG | - | chr7_4:59631788-59631807 | Msa1167260:intron | 30.0% | |
| AATGCATCATATGACAACAA+TGG | - | chr7_4:59631862-59631881 | Msa1167260:intron | 30.0% | |
| !! | ATTTTTATTGGAGTGATGGA+TGG | + | chr7_4:59631914-59631933 | None:intergenic | 30.0% |
| TCTTAAGTGTTACACTTTGT+GGG | - | chr7_4:59631999-59632018 | Msa1167260:intron | 30.0% | |
| TGTTACGCTTATAACAAGAT+AGG | - | chr7_4:59632023-59632042 | Msa1167260:intron | 30.0% | |
| ! | GATGAATTGATGATACTATG+AGG | - | chr7_4:59632079-59632098 | Msa1167260:intron | 30.0% |
| TCTATAGCAGAATCATATAG+TGG | - | chr7_4:59632467-59632486 | Msa1167260:intron | 30.0% | |
| ATATTCCGAAAAAAGGGTTA+AGG | - | chr7_4:59632557-59632576 | Msa1167260:intron | 30.0% | |
| TATTCCGAAAAAAGGGTTAA+GGG | - | chr7_4:59632558-59632577 | Msa1167260:intron | 30.0% | |
| TTGTTCTTATGTTCACATTC+AGG | - | chr7_4:59632625-59632644 | Msa1167260:intron | 30.0% | |
| TGTTCTTATGTTCACATTCA+GGG | - | chr7_4:59632626-59632645 | Msa1167260:intron | 30.0% | |
| ATTTATTCAACAAGAACACG+TGG | + | chr7_4:59632733-59632752 | None:intergenic | 30.0% | |
| AGGCAAATTGGAAATAGTAT+TGG | - | chr7_4:59632837-59632856 | Msa1167260:intron | 30.0% | |
| !! | TTGTCTAGTGCTACTGTTTT+TGG | - | chr7_4:59631216-59631235 | Msa1167260:CDS | 35.0% |
| !! | AGAAAGAGTATAGTTCTGGA+CGG | + | chr7_4:59631387-59631406 | None:intergenic | 35.0% |
| AAAGGGGTTTATGAAGAAGT+CGG | - | chr7_4:59631806-59631825 | Msa1167260:intron | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | chr7_4:59631998-59632017 | Msa1167260:intron | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | chr7_4:59632000-59632019 | Msa1167260:intron | 35.0% | |
| TTACATTGACGGTTAGAAGT+TGG | - | chr7_4:59632217-59632236 | Msa1167260:intron | 35.0% | |
| ACTAGGATTTCTGTTATAGC+AGG | - | chr7_4:59632265-59632284 | Msa1167260:intron | 35.0% | |
| CTAGGATTTCTGTTATAGCA+GGG | - | chr7_4:59632266-59632285 | Msa1167260:intron | 35.0% | |
| ATTTCTGTTATAGCAGGGAT+TGG | - | chr7_4:59632271-59632290 | Msa1167260:intron | 35.0% | |
| ! | TCGTAAACTTGATCGATTCA+AGG | + | chr7_4:59632683-59632702 | None:intergenic | 35.0% |
| AGCGGGTGATTAGATTTAAA+AGG | + | chr7_4:59632756-59632775 | None:intergenic | 35.0% | |
| ATATCCAACAACAACAAAGC+GGG | + | chr7_4:59632773-59632792 | None:intergenic | 35.0% | |
| CATATCCAACAACAACAAAG+CGG | + | chr7_4:59632774-59632793 | None:intergenic | 35.0% | |
| ATTTCCAATTTGCCTGAACA+GGG | + | chr7_4:59632832-59632851 | None:intergenic | 35.0% | |
| TATTTCCAATTTGCCTGAAC+AGG | + | chr7_4:59632833-59632852 | None:intergenic | 35.0% | |
| ATGCAGACATTTCAAAGTGA+AGG | + | chr7_4:59632940-59632959 | None:intergenic | 35.0% | |
| CGATCACTAATTCATTACCA+AGG | + | chr7_4:59632996-59633015 | None:intergenic | 35.0% | |
| !! | TTGTCTAGTGCTACTGTTTT+TGG | - | chr7_4:59631216-59631235 | Msa1167260:CDS | 35.0% |
| !! | AGAAAGAGTATAGTTCTGGA+CGG | + | chr7_4:59631387-59631406 | None:intergenic | 35.0% |
| AAAGGGGTTTATGAAGAAGT+CGG | - | chr7_4:59631806-59631825 | Msa1167260:intron | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | - | chr7_4:59631998-59632017 | Msa1167260:intron | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | - | chr7_4:59632000-59632019 | Msa1167260:intron | 35.0% | |
| TTACATTGACGGTTAGAAGT+TGG | - | chr7_4:59632217-59632236 | Msa1167260:intron | 35.0% | |
| ACTAGGATTTCTGTTATAGC+AGG | - | chr7_4:59632265-59632284 | Msa1167260:intron | 35.0% | |
| CTAGGATTTCTGTTATAGCA+GGG | - | chr7_4:59632266-59632285 | Msa1167260:intron | 35.0% | |
| ATTTCTGTTATAGCAGGGAT+TGG | - | chr7_4:59632271-59632290 | Msa1167260:intron | 35.0% | |
| ! | TCGTAAACTTGATCGATTCA+AGG | + | chr7_4:59632683-59632702 | None:intergenic | 35.0% |
| AGCGGGTGATTAGATTTAAA+AGG | + | chr7_4:59632756-59632775 | None:intergenic | 35.0% | |
| ATATCCAACAACAACAAAGC+GGG | + | chr7_4:59632773-59632792 | None:intergenic | 35.0% | |
| CATATCCAACAACAACAAAG+CGG | + | chr7_4:59632774-59632793 | None:intergenic | 35.0% | |
| ATTTCCAATTTGCCTGAACA+GGG | + | chr7_4:59632832-59632851 | None:intergenic | 35.0% | |
| TATTTCCAATTTGCCTGAAC+AGG | + | chr7_4:59632833-59632852 | None:intergenic | 35.0% | |
| ATGCAGACATTTCAAAGTGA+AGG | + | chr7_4:59632940-59632959 | None:intergenic | 35.0% | |
| CGATCACTAATTCATTACCA+AGG | + | chr7_4:59632996-59633015 | None:intergenic | 35.0% | |
| AAGGGGTTTATGAAGAAGTC+GGG | - | chr7_4:59631807-59631826 | Msa1167260:intron | 40.0% | |
| !! | TTTATTGGAGTGATGGATGG+TGG | + | chr7_4:59631911-59631930 | None:intergenic | 40.0% |
| TGATGCCATTGTACAAACAG+TGG | - | chr7_4:59632112-59632131 | Msa1167260:intron | 40.0% | |
| GATGCCATTGTACAAACAGT+GGG | - | chr7_4:59632113-59632132 | Msa1167260:intron | 40.0% | |
| ATGCCATTGTACAAACAGTG+GGG | - | chr7_4:59632114-59632133 | Msa1167260:intron | 40.0% | |
| !!! | ACCACCCTTAACCCTTTTTT+CGG | + | chr7_4:59632565-59632584 | None:intergenic | 40.0% |
| TTACGAGCCAAAGACTGTAA+TGG | - | chr7_4:59632697-59632716 | Msa1167260:intron | 40.0% | |
| TTCTGGTCCATTACAGTCTT+TGG | + | chr7_4:59632707-59632726 | None:intergenic | 40.0% | |
| !! | CGCTTTGTTGTTGTTGGATA+TGG | - | chr7_4:59632772-59632791 | Msa1167260:intron | 40.0% |
| !! | TGATGTTGAAGTTGATGCTG+TGG | - | chr7_4:59632876-59632895 | Msa1167260:intron | 40.0% |
| !! | GATGTTGAAGTTGATGCTGT+GGG | - | chr7_4:59632877-59632896 | Msa1167260:intron | 40.0% |
| AAGGGGTTTATGAAGAAGTC+GGG | - | chr7_4:59631807-59631826 | Msa1167260:intron | 40.0% | |
| !! | TTTATTGGAGTGATGGATGG+TGG | + | chr7_4:59631911-59631930 | None:intergenic | 40.0% |
| TGATGCCATTGTACAAACAG+TGG | - | chr7_4:59632112-59632131 | Msa1167260:intron | 40.0% | |
| GATGCCATTGTACAAACAGT+GGG | - | chr7_4:59632113-59632132 | Msa1167260:intron | 40.0% | |
| ATGCCATTGTACAAACAGTG+GGG | - | chr7_4:59632114-59632133 | Msa1167260:intron | 40.0% | |
| !!! | ACCACCCTTAACCCTTTTTT+CGG | + | chr7_4:59632565-59632584 | None:intergenic | 40.0% |
| TTACGAGCCAAAGACTGTAA+TGG | - | chr7_4:59632697-59632716 | Msa1167260:intron | 40.0% | |
| TTCTGGTCCATTACAGTCTT+TGG | + | chr7_4:59632707-59632726 | None:intergenic | 40.0% | |
| !! | CGCTTTGTTGTTGTTGGATA+TGG | - | chr7_4:59632772-59632791 | Msa1167260:intron | 40.0% |
| !! | TGATGTTGAAGTTGATGCTG+TGG | - | chr7_4:59632876-59632895 | Msa1167260:intron | 40.0% |
| !! | GATGTTGAAGTTGATGCTGT+GGG | - | chr7_4:59632877-59632896 | Msa1167260:intron | 40.0% |
| AGGGGTTTATGAAGAAGTCG+GGG | - | chr7_4:59631808-59631827 | Msa1167260:intron | 45.0% | |
| !!! | AGTGATGGATGGTGGTTTTG+AGG | + | chr7_4:59631903-59631922 | None:intergenic | 45.0% |
| ACACCCCACTGTTTGTACAA+TGG | + | chr7_4:59632120-59632139 | None:intergenic | 45.0% | |
| TCCGAAAAAAGGGTTAAGGG+TGG | - | chr7_4:59632561-59632580 | Msa1167260:intron | 45.0% | |
| !! | ATCACCCGCTTTGTTGTTGT+TGG | - | chr7_4:59632766-59632785 | Msa1167260:intron | 45.0% |
| ATTGCCCTGTTCAGGCAAAT+TGG | - | chr7_4:59632825-59632844 | Msa1167260:intron | 45.0% | |
| AAGTCCATAGCGTGATTCTG+AGG | - | chr7_4:59632909-59632928 | Msa1167260:intron | 45.0% | |
| AGAACCTCAGAATCACGCTA+TGG | + | chr7_4:59632916-59632935 | None:intergenic | 45.0% | |
| AGTGATCGATGCTTTCGCTA+TGG | - | chr7_4:59633008-59633027 | Msa1167260:intron | 45.0% | |
| TCGATGCTTTCGCTATGGAA+TGG | - | chr7_4:59633013-59633032 | Msa1167260:intron | 45.0% | |
| AGGGGTTTATGAAGAAGTCG+GGG | - | chr7_4:59631808-59631827 | Msa1167260:intron | 45.0% | |
| !!! | AGTGATGGATGGTGGTTTTG+AGG | + | chr7_4:59631903-59631922 | None:intergenic | 45.0% |
| ACACCCCACTGTTTGTACAA+TGG | + | chr7_4:59632120-59632139 | None:intergenic | 45.0% | |
| TCCGAAAAAAGGGTTAAGGG+TGG | - | chr7_4:59632561-59632580 | Msa1167260:intron | 45.0% | |
| !! | ATCACCCGCTTTGTTGTTGT+TGG | - | chr7_4:59632766-59632785 | Msa1167260:intron | 45.0% |
| ATTGCCCTGTTCAGGCAAAT+TGG | - | chr7_4:59632825-59632844 | Msa1167260:intron | 45.0% | |
| AAGTCCATAGCGTGATTCTG+AGG | - | chr7_4:59632909-59632928 | Msa1167260:intron | 45.0% | |
| AGAACCTCAGAATCACGCTA+TGG | + | chr7_4:59632916-59632935 | None:intergenic | 45.0% | |
| AGTGATCGATGCTTTCGCTA+TGG | - | chr7_4:59633008-59633027 | Msa1167260:intron | 45.0% | |
| TCGATGCTTTCGCTATGGAA+TGG | - | chr7_4:59633013-59633032 | Msa1167260:intron | 45.0% | |
| !!! | TATTAGTTTTAATTTTATAT+TGG | - | chr7_4:59631407-59631426 | Msa1167260:intron | 5.0% |
| !!! | TTTGTTTAAAATTTAAAATA+TGG | - | chr7_4:59631683-59631702 | Msa1167260:intron | 5.0% |
| !!! | ATAGTATTTAATATTTTTAT+TGG | + | chr7_4:59631926-59631945 | None:intergenic | 5.0% |
| !!! | TATTAGTTTTAATTTTATAT+TGG | - | chr7_4:59631407-59631426 | Msa1167260:intron | 5.0% |
| !!! | TTTGTTTAAAATTTAAAATA+TGG | - | chr7_4:59631683-59631702 | Msa1167260:intron | 5.0% |
| !!! | ATAGTATTTAATATTTTTAT+TGG | + | chr7_4:59631926-59631945 | None:intergenic | 5.0% |
| ACAAGAACACGTGGTCGTTC+TGG | + | chr7_4:59632724-59632743 | None:intergenic | 50.0% | |
| TGGTCACAATTGCCCTGTTC+AGG | - | chr7_4:59632817-59632836 | Msa1167260:intron | 50.0% | |
| ACAAGAACACGTGGTCGTTC+TGG | + | chr7_4:59632724-59632743 | None:intergenic | 50.0% | |
| TGGTCACAATTGCCCTGTTC+AGG | - | chr7_4:59632817-59632836 | Msa1167260:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 59631188 | 59633074 | 59631188 | ID=Msa1167260;Name=Msa1167260 |
| chr7_4 | mRNA | 59631188 | 59633074 | 59631188 | ID=Msa1167260-mRNA-1;Parent=Msa1167260;Name=Msa1167260-mRNA-1;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.5|1|1|4|0|62 |
| chr7_4 | exon | 59633070 | 59633074 | 59633070 | ID=Msa1167260-mRNA-1:exon:18542;Parent=Msa1167260-mRNA-1 |
| chr7_4 | exon | 59632889 | 59632896 | 59632889 | ID=Msa1167260-mRNA-1:exon:18541;Parent=Msa1167260-mRNA-1 |
| chr7_4 | exon | 59631527 | 59631615 | 59631527 | ID=Msa1167260-mRNA-1:exon:18540;Parent=Msa1167260-mRNA-1 |
| chr7_4 | exon | 59631188 | 59631274 | 59631188 | ID=Msa1167260-mRNA-1:exon:18539;Parent=Msa1167260-mRNA-1 |
| chr7_4 | CDS | 59633070 | 59633074 | 59633070 | ID=Msa1167260-mRNA-1:cds;Parent=Msa1167260-mRNA-1 |
| chr7_4 | CDS | 59632889 | 59632896 | 59632889 | ID=Msa1167260-mRNA-1:cds;Parent=Msa1167260-mRNA-1 |
| chr7_4 | CDS | 59631527 | 59631615 | 59631527 | ID=Msa1167260-mRNA-1:cds;Parent=Msa1167260-mRNA-1 |
| chr7_4 | CDS | 59631188 | 59631274 | 59631188 | ID=Msa1167260-mRNA-1:cds;Parent=Msa1167260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
