AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0340710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340710 MtrunA17_Chr2g0323381 96.618 414 13 1 1 413 1 414 0.0 807
Msa0340710 MtrunA17_Chr4g0022871 81.687 415 73 2 1 413 1 414 0.0 688
Msa0340710 MtrunA17_Chr4g0022861 75.879 398 95 1 17 413 1 398 0.0 624
Msa0340710 MtrunA17_Chr2g0280991 68.873 408 124 3 7 411 14 421 0.0 566
Msa0340710 MtrunA17_Chr2g0280971 68.059 407 128 2 7 411 35 441 0.0 561
Msa0340710 MtrunA17_Chr4g0022801 72.222 396 81 1 47 413 10 405 0.0 556
Msa0340710 MtrunA17_Chr8g0335821 60.606 363 140 2 52 411 2 364 8.59e-143 411
Msa0340710 MtrunA17_Chr1g0184961 70.079 254 63 3 47 292 104 352 7.12e-118 347
Msa0340710 MtrunA17_Chr4g0020331 32.178 404 234 12 21 409 37 415 3.07e-50 174
Msa0340710 MtrunA17_Chr2g0280961 65.873 126 42 1 243 367 106 231 3.13e-49 166
Msa0340710 MtrunA17_Chr2g0280961 56.180 89 39 0 52 140 2 90 3.36e-26 105
Msa0340710 MtrunA17_Chr3g0103741 30.424 401 251 8 18 409 42 423 5.48e-42 153
Msa0340710 MtrunA17_Chr4g0063911 28.706 425 255 12 1 409 6 398 6.72e-39 144
Msa0340710 MtrunA17_Chr1g0184971 74.603 63 16 0 295 357 2 64 1.08e-27 105
Msa0340710 MtrunA17_Chr4g0022811 76.190 42 10 0 5 46 3 44 1.75e-15 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340710 AT4G05120.1 70.416 409 117 3 5 411 8 414 0.0 596
Msa0340710 AT4G05120.2 70.416 409 117 3 5 411 8 414 0.0 596
Msa0340710 AT4G05110.3 67.482 409 129 3 5 411 8 414 0.0 567
Msa0340710 AT4G05110.1 67.482 409 129 3 5 411 8 414 0.0 567
Msa0340710 AT4G05110.2 67.237 409 130 3 5 411 8 414 0.0 566
Msa0340710 AT4G05140.1 65.931 408 138 1 5 411 8 415 0.0 559
Msa0340710 AT4G05130.1 64.563 412 140 4 5 413 8 416 0.0 545
Msa0340710 AT3G09990.1 63.235 408 148 2 8 413 10 417 0.0 525
Msa0340710 AT1G61630.1 61.244 418 151 4 1 411 1 414 2.85e-177 501
Msa0340710 AT1G70330.1 31.477 413 238 9 16 409 64 450 3.21e-47 168
Msa0340710 AT1G02630.1 29.056 413 252 10 5 409 10 389 1.12e-45 162
Msa0340710 AT1G02630.2 27.751 209 147 4 5 211 10 216 2.95e-21 94.7

Find 114 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTTGAAATTCTTGAAAT+TGG 0.116609 2_4:+62107835 Msa0340710:CDS
GTGCATTAACCTCTGCTTTA+AGG 0.117350 2_4:+62106913 Msa0340710:CDS
TTTCTCCATGGTAGATTTAT+AGG 0.187275 2_4:+62108564 Msa0340710:three_prime_UTR
GACTCTTCCCTCTTCCTTCT+TGG 0.207482 2_4:+62104272 Msa0340710:five_prime_UTR
TTACTACATTTACTTGTTTC+CGG 0.228601 2_4:+62105333 Msa0340710:CDS
GAAAGAAATAGTACTTCTTT+AGG 0.270591 2_4:-62107336 None:intergenic
AGAGATATGATATGGTTAAA+TGG 0.271531 2_4:+62108463 Msa0340710:three_prime_UTR
ATTTCTATGTAATTTCAAAA+TGG 0.282630 2_4:+62108698 Msa0340710:three_prime_UTR
AGCAGCATTTGATAATTCTA+AGG 0.310431 2_4:+62106947 Msa0340710:CDS
GGGAAAATATGCTGCAATAT+TGG 0.315284 2_4:+62105249 Msa0340710:intron
GATAATGTTGACATCATTCT+TGG 0.317000 2_4:+62107952 Msa0340710:CDS
ATCTGCACCCAAAGGTTATA+AGG 0.323238 2_4:+62108012 Msa0340710:CDS
GTACTTCTTTAGGTATTGTT+TGG 0.329362 2_4:-62107326 None:intergenic
GGTTAAATGGCACAACAAAA+AGG 0.338949 2_4:+62108476 Msa0340710:three_prime_UTR
TAATTTCAAAATGGCTGTAT+TGG 0.343524 2_4:+62108707 Msa0340710:three_prime_UTR
CAAAAGTCAATACTAGATTA+AGG 0.350479 2_4:+62106114 Msa0340710:CDS
AGGTCTTACCTTATAACCTT+TGG 0.354635 2_4:-62108020 None:intergenic
GGTCTTACCTTATAACCTTT+GGG 0.357526 2_4:-62108019 None:intergenic
ATATTGGTATGCTTCCTTCT+TGG 0.358786 2_4:+62105265 Msa0340710:CDS
ACACAAAATGCATTGAAGTA+TGG 0.361696 2_4:+62108662 Msa0340710:three_prime_UTR
CTAGACTGGTTGTGGTTGAT+AGG 0.364036 2_4:+62108335 Msa0340710:CDS
ATAGTGTCAATGCATAAATT+AGG 0.364083 2_4:-62107522 None:intergenic
AAGCTCAAAGAATGTTGATA+TGG 0.364975 2_4:-62107184 None:intergenic
TACAATGTGTGGGATCTAAT+AGG 0.376699 2_4:+62107800 Msa0340710:CDS
TAGCTGACCTGAATGAATTC+TGG 0.378851 2_4:-62106403 None:intergenic
GATACCGGAGCACATAGTTT+AGG 0.399627 2_4:+62107571 Msa0340710:CDS
AAGATCAGCTGAAACCGTTT+TGG 0.400371 2_4:-62107289 None:intergenic
GTACGGTAGTATTTCACAAT+TGG 0.413573 2_4:-62107246 None:intergenic
ATAATGTTGACATCATTCTT+GGG 0.414131 2_4:+62107953 Msa0340710:CDS
GGGTCCAGAACAAAATGCTT+TGG 0.429540 2_4:+62108262 Msa0340710:intron
GTATGCTTCCTTCTTGGCAA+TGG 0.430207 2_4:+62105271 Msa0340710:CDS
TGGCAATTTAGAACTATAAT+CGG 0.430625 2_4:-62106428 None:intergenic
CATGTTCAAGGTGGAATGAT+TGG 0.433600 2_4:+62106361 Msa0340710:CDS
CATGAAGCCAGAATTCATTC+AGG 0.440760 2_4:+62106396 Msa0340710:CDS
GGTCCAGAACAAAATGCTTT+GGG 0.444913 2_4:+62108263 Msa0340710:CDS
ACTAGATTAAGGAACCTGTT+TGG 0.445916 2_4:+62106125 Msa0340710:CDS
TAGTTGGATTTAGCAACATC+TGG 0.446987 2_4:+62106271 Msa0340710:intron
TTGGTGTTGTTTCTACTTGG+AGG 0.450252 2_4:+62108293 Msa0340710:CDS
TGCTATATTGTCTTATAATG+AGG 0.452571 2_4:+62106091 Msa0340710:CDS
GTATCTTCAGACAGAAATCC+AGG 0.455042 2_4:-62107553 None:intergenic
TTGTTGGTGTTGTTTCTACT+TGG 0.466918 2_4:+62108290 Msa0340710:CDS
AAATGCTTTGGGAAACTTGT+TGG 0.472777 2_4:+62108274 Msa0340710:CDS
TCTAAGGATGGTCTTAGAAA+AGG 0.472918 2_4:+62106963 Msa0340710:CDS
TGTGCAATTAGTGGTGCCTT+TGG 0.477018 2_4:+62106325 Msa0340710:CDS
TGCAGAATTATCATCCCTCC+AGG 0.479683 2_4:+62106027 Msa0340710:intron
GCAAGTGTTCCAACTGCAAA+TGG 0.482568 2_4:-62106071 None:intergenic
GGGTTACACTAGACTGGTTG+TGG 0.484518 2_4:+62108327 Msa0340710:CDS
ACTGCAAAGTATGGTGATCA+AGG 0.485522 2_4:+62107923 Msa0340710:CDS
ATTGGTATATGTGCAATTAG+TGG 0.486598 2_4:+62106316 Msa0340710:CDS
TCTGCGCTTTAGTGGTTCAT+CGG 0.494479 2_4:+62108746 Msa0340710:three_prime_UTR
TCAGCTGATCTTGCAGCTGG+TGG 0.503591 2_4:+62107300 Msa0340710:CDS
AAAGACATCCATTGCCAAGA+AGG 0.509411 2_4:-62105279 None:intergenic
TCTCAATAAGCACAAACTAC+AGG 0.510107 2_4:+62108373 Msa0340710:three_prime_UTR
GTTTCAGCTGATCTTGCAGC+TGG 0.510600 2_4:+62107297 Msa0340710:CDS
GTGTTCCAACTGCAAATGGC+TGG 0.520973 2_4:-62106067 None:intergenic
TGTAATTAACCTTAAAGCAG+AGG 0.522589 2_4:-62106922 None:intergenic
TTGCAGGGGTTACACTAGAC+TGG 0.523837 2_4:+62108321 Msa0340710:CDS
GTGTTTAGATTAATATTCAA+AGG 0.528049 2_4:+62108803 Msa0340710:three_prime_UTR
ATTTCAAGAATTTCAAGAGT+GGG 0.530371 2_4:-62107832 None:intergenic
GATTTAGCAACATCTGGTAA+AGG 0.531613 2_4:+62106277 Msa0340710:CDS
CAAACATGAACACGCCAAGA+AGG 0.542626 2_4:-62104286 None:intergenic
ACATCTGGTAAAGGAGGACT+TGG 0.542893 2_4:+62106286 Msa0340710:CDS
ACAAACAGTGAGGTAACCAT+TGG 0.544603 2_4:-62107981 None:intergenic
TTTGCAGTGAAATAAAATGC+TGG 0.546823 2_4:-62107908 None:intergenic
TGTCTTTCTCAGCACTTCTG+TGG 0.546855 2_4:+62104307 Msa0340710:five_prime_UTR
GCATAAACCTCTAGACGTGT+TGG 0.547583 2_4:-62105135 None:intergenic
GGATTTCTGTCTGAAGATAC+CGG 0.548527 2_4:+62107556 Msa0340710:CDS
GTATAATAGAGATTAGTTCA+AGG 0.548918 2_4:-62104332 None:intergenic
GTTGCAGATGCTCATGTTCA+AGG 0.549362 2_4:+62106349 Msa0340710:CDS
TGTGGTTGATAGGCAAAGGT+TGG 0.549746 2_4:+62108345 Msa0340710:CDS
CAAAGTATGGTGATCAAGGT+TGG 0.550801 2_4:+62107927 Msa0340710:CDS
GCATTTGATAATTCTAAGGA+TGG 0.554074 2_4:+62106951 Msa0340710:CDS
TCATTCTTGGGGCTATCCAA+TGG 0.554884 2_4:+62107965 Msa0340710:CDS
TGCACACAAACAAGAGAGGA+AGG 0.556796 2_4:+62107450 Msa0340710:CDS
TACAGGAATAGTTGTGATTG+AGG 0.557006 2_4:+62108390 Msa0340710:three_prime_UTR
TGAACACGCCAAGAAGGAAG+AGG 0.564741 2_4:-62104280 None:intergenic
ACAAGAGAGGAAGGGAAACA+AGG 0.569413 2_4:+62107459 Msa0340710:CDS
TGTTCCTAAACTATGTGCTC+CGG 0.571762 2_4:-62107575 None:intergenic
GTATACCAGCCATTTGCAGT+TGG 0.574201 2_4:+62106062 Msa0340710:CDS
TAAACCTCTAGACGTGTTGG+AGG 0.581439 2_4:-62105132 None:intergenic
AGCATCAGAAGGATCCAAAA+CGG 0.581586 2_4:+62107275 Msa0340710:CDS
ATGTGTCATTTACACAAGGA+AGG 0.585751 2_4:+62108502 Msa0340710:three_prime_UTR
TGTGTCATTTACACAAGGAA+GGG 0.590923 2_4:+62108503 Msa0340710:three_prime_UTR
GTGTCATTTACACAAGGAAG+GGG 0.591185 2_4:+62108504 Msa0340710:three_prime_UTR
CTCCATGGTAGATTTATAGG+AGG 0.592906 2_4:+62108567 Msa0340710:three_prime_UTR
TAAAAGGGTCTGTTTCTCCA+TGG 0.596121 2_4:+62108552 Msa0340710:three_prime_UTR
TTTATTATTACGCTTGGACA+TGG 0.598221 2_4:-62108601 None:intergenic
TAATGTTGACATCATTCTTG+GGG 0.600627 2_4:+62107954 Msa0340710:CDS
AATGAATTCTGGCTTCATGT+AGG 0.600985 2_4:-62106392 None:intergenic
TGAGCCTCCAACACGTCTAG+AGG 0.604316 2_4:+62105128 Msa0340710:CDS
AATTTCAAGAATTTCAAGAG+TGG 0.605836 2_4:-62107833 None:intergenic
GAACACGCCAAGAAGGAAGA+GGG 0.611432 2_4:-62104279 None:intergenic
TTAGCAACATCTGGTAAAGG+AGG 0.617570 2_4:+62106280 Msa0340710:CDS
TAATTGCAATGTACAATGTG+TGG 0.621011 2_4:+62107789 Msa0340710:CDS
CGTACAAAAGCAGCATCAGA+AGG 0.622959 2_4:+62107264 Msa0340710:CDS
ATGAGCATCTGCAACTCCAA+AGG 0.623544 2_4:-62106341 None:intergenic
AATTGCAATGTACAATGTGT+GGG 0.632930 2_4:+62107790 Msa0340710:CDS
GTTATGACATCTGCACCCAA+AGG 0.634499 2_4:+62108004 Msa0340710:CDS
AATAATTCAAGGCAGAGCCA+TGG 0.635029 2_4:+62105098 Msa0340710:exon
TACCTCCTATAAATCTACCA+TGG 0.635378 2_4:-62108569 None:intergenic
TGGAGGCTCAACGTTGACCA+TGG 0.638186 2_4:-62105115 None:intergenic
AAATGCATTGAAGTATGGTG+AGG 0.655656 2_4:+62108667 Msa0340710:three_prime_UTR
ACAAGTGTAAGCACCCTGGA+GGG 0.662948 2_4:-62106041 None:intergenic
GTATACAAGTGTAAGCACCC+TGG 0.665189 2_4:-62106045 None:intergenic
TGGTTGTGGTTGATAGGCAA+AGG 0.669026 2_4:+62108341 Msa0340710:CDS
GCACACAAACAAGAGAGGAA+GGG 0.670991 2_4:+62107451 Msa0340710:CDS
ATCATGCACACAAACAAGAG+AGG 0.673529 2_4:+62107446 Msa0340710:CDS
GAGCACATAGTTTAGGAACA+TGG 0.674637 2_4:+62107578 Msa0340710:CDS
TACAAGTGTAAGCACCCTGG+AGG 0.676424 2_4:-62106042 None:intergenic
TATCTTCAGACAGAAATCCA+GGG 0.678514 2_4:-62107552 None:intergenic
GTGTATGTGTCATTTACACA+AGG 0.691380 2_4:+62108498 Msa0340710:three_prime_UTR
GCAGAATTATCATCCCTCCA+GGG 0.701785 2_4:+62106028 Msa0340710:intron
GCAGATGCTCATGTTCAAGG+TGG 0.722859 2_4:+62106352 Msa0340710:CDS
ATGTCATAACACAAACAGTG+AGG 0.743595 2_4:-62107991 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAATTATTAGCTTTTT+AGG - chr2_4:62106646-62106665 None:intergenic 10.0%
!!! TTTATGTTTTAATTTATTGT+AGG + chr2_4:62108241-62108260 Msa0340710:intron 10.0%
!!! TTATGTTTTAATTTATTGTA+GGG + chr2_4:62108242-62108261 Msa0340710:intron 10.0%
!!! CAATTTTTTTAACAAATAAA+AGG + chr2_4:62108536-62108555 Msa0340710:three_prime_UTR 10.0%
!! ATAACAATTAAATTACGTAA+AGG - chr2_4:62104404-62104423 None:intergenic 15.0%
!! TAATAGAAATTAAAACTTCT+GGG - chr2_4:62104553-62104572 None:intergenic 15.0%
!! TTAATAGAAATTAAAACTTC+TGG - chr2_4:62104554-62104573 None:intergenic 15.0%
!!! GAAGTTTTAATTTCTATTAA+TGG + chr2_4:62104554-62104573 Msa0340710:intron 15.0%
!! TATATGATATCAAAAAATTG+TGG - chr2_4:62104699-62104718 None:intergenic 15.0%
!! TACTTATAAATCAACAAAAA+TGG - chr2_4:62104748-62104767 None:intergenic 15.0%
!! TACATGCATTTATAATAATT+TGG - chr2_4:62104860-62104879 None:intergenic 15.0%
!!! TATATATATTCTAGTTATGT+TGG + chr2_4:62104994-62105013 Msa0340710:intron 15.0%
!!! TTCATTTTTTTTCTTGTTAT+TGG + chr2_4:62105218-62105237 Msa0340710:intron 15.0%
!! AATTTATAATTAAGATTGAG+AGG + chr2_4:62105461-62105480 Msa0340710:intron 15.0%
!! TATAAATATAAAACTGCATT+GGG - chr2_4:62105645-62105664 None:intergenic 15.0%
!! ATATAAATATAAAACTGCAT+TGG - chr2_4:62105646-62105665 None:intergenic 15.0%
!!! GCTAATAATTTTAATTTCTA+TGG + chr2_4:62106651-62106670 Msa0340710:intron 15.0%
!!! AATAATTTTAATTTCTATGG+TGG + chr2_4:62106654-62106673 Msa0340710:intron 15.0%
!!! ATTAGATGAAATTTTGATTA+TGG - chr2_4:62107030-62107049 None:intergenic 15.0%
!! AAAATTACCAAAGATTTAAA+AGG - chr2_4:62107622-62107641 None:intergenic 15.0%
!! TATTATAGTAGTGTTTAATT+TGG + chr2_4:62108051-62108070 Msa0340710:intron 15.0%
!! CATAAATATTAATGTGAATT+TGG - chr2_4:62108227-62108246 None:intergenic 15.0%
!! TAAAAACGAAAAATAGAAAT+TGG + chr2_4:62108422-62108441 Msa0340710:three_prime_UTR 15.0%
!!! TTTTTTTTTATTATTACGCT+TGG - chr2_4:62108610-62108629 None:intergenic 15.0%
!! AAGCGTAATAATAAAAAAAA+AGG + chr2_4:62108609-62108628 Msa0340710:three_prime_UTR 15.0%
!! ATTTCTATGTAATTTCAAAA+TGG + chr2_4:62108698-62108717 Msa0340710:three_prime_UTR 15.0%
!! GATAACTAGAAATATATAAC+TGG - chr2_4:62104921-62104940 None:intergenic 20.0%
!! AAGTATATAACCTCAATTTA+AGG - chr2_4:62105053-62105072 None:intergenic 20.0%
!! GATTGAAAAAGAATAATTCA+AGG + chr2_4:62105087-62105106 Msa0340710:five_prime_UTR 20.0%
!!! TACTTTTATTTGCTTAAGAA+TGG + chr2_4:62105175-62105194 Msa0340710:intron 20.0%
!!! AATTGCACAAATCTATTTTT+TGG + chr2_4:62105414-62105433 Msa0340710:intron 20.0%
!! AAAACGTAAAACAAATTGTA+GGG + chr2_4:62105603-62105622 Msa0340710:intron 20.0%
!! ATAAATATAAAACTGCATTG+GGG - chr2_4:62105644-62105663 None:intergenic 20.0%
!!! TTTATAATCTGGAATTCAAT+CGG - chr2_4:62105862-62105881 None:intergenic 20.0%
!!! TTTTTTCATAACCACTTTTT+TGG + chr2_4:62106157-62106176 Msa0340710:CDS 20.0%
!! ACAATTAGTTGAATAGATAA+AGG - chr2_4:62106197-62106216 None:intergenic 20.0%
!! TCCAATAAATTTAATGTAGT+TGG + chr2_4:62106255-62106274 Msa0340710:intron 20.0%
!! TCCAACTACATTAAATTTAT+TGG - chr2_4:62106259-62106278 None:intergenic 20.0%
!! ATCAAACATAAACGAAATTA+TGG - chr2_4:62106529-62106548 None:intergenic 20.0%
!! TTTATGTTTGATTCTATCTT+TGG + chr2_4:62106537-62106556 Msa0340710:intron 20.0%
!! AAACCAAACATAACAATTTA+TGG - chr2_4:62106584-62106603 None:intergenic 20.0%
!!! GATTTTTATCGATTTATGTT+AGG - chr2_4:62106735-62106754 None:intergenic 20.0%
!!! ATTTTACGTTCAATTAATTC+AGG + chr2_4:62106786-62106805 Msa0340710:intron 20.0%
!! CTAAATAGTATATAGAGTAA+TGG - chr2_4:62107123-62107142 None:intergenic 20.0%
!!! TATTTCACAATTGGTATTTT+AGG - chr2_4:62107240-62107259 None:intergenic 20.0%
!!! ATAATAATTTCCCTTTTTTC+AGG + chr2_4:62107417-62107436 Msa0340710:intron 20.0%
!!! AGTTGTGCTTATAATTTTTT+AGG + chr2_4:62107753-62107772 Msa0340710:intron 20.0%
!!! TATTTATGCTTTAAGGATAT+TGG - chr2_4:62108180-62108199 None:intergenic 20.0%
!! TTTGGATTTCATATAGTATA+GGG - chr2_4:62108209-62108228 None:intergenic 20.0%
!! ATTTGGATTTCATATAGTAT+AGG - chr2_4:62108210-62108229 None:intergenic 20.0%
!!! CTATTTTTAGAGATATGATA+TGG + chr2_4:62108455-62108474 Msa0340710:three_prime_UTR 20.0%
!! GTATAATAGAGATTAGTTCA+AGG - chr2_4:62104335-62104354 None:intergenic 25.0%
! AAGATAATTAGAGAAGAAGA+GGG - chr2_4:62104378-62104397 None:intergenic 25.0%
! AAAGATAATTAGAGAAGAAG+AGG - chr2_4:62104379-62104398 None:intergenic 25.0%
! CGTAATTTAATTGTTATGCT+TGG + chr2_4:62104407-62104426 Msa0340710:intron 25.0%
! CTTGGTATCTTTATTCATTT+AGG + chr2_4:62104425-62104444 Msa0340710:intron 25.0%
! CATAAAAGGAAGAAAGATAT+TGG + chr2_4:62104470-62104489 Msa0340710:intron 25.0%
! ACTTTGATTCAAAATCTTGA+TGG - chr2_4:62104662-62104681 None:intergenic 25.0%
! AACTGTGTACGTAAATTTAA+TGG + chr2_4:62104895-62104914 Msa0340710:intron 25.0%
! ATATACTTTCTTGTAGAACT+TGG + chr2_4:62105065-62105084 Msa0340710:intron 25.0%
! TATTTGCTTAAGAATGGAAA+TGG + chr2_4:62105181-62105200 Msa0340710:intron 25.0%
!!! TTCTTGTTATTGGTATTCAT+AGG + chr2_4:62105228-62105247 Msa0340710:intron 25.0%
!!! TCTTGTTATTGGTATTCATA+GGG + chr2_4:62105229-62105248 Msa0340710:intron 25.0%
! TTACTACATTTACTTGTTTC+CGG + chr2_4:62105333-62105352 Msa0340710:CDS 25.0%
! AAAGTACACAAATTACATAC+CGG - chr2_4:62105355-62105374 None:intergenic 25.0%
!!! CTACAATTTGTTTTACGTTT+TGG - chr2_4:62105604-62105623 None:intergenic 25.0%
! CAAAACGTAAAACAAATTGT+AGG + chr2_4:62105602-62105621 Msa0340710:intron 25.0%
!! TTATAATCTGGAATTCAATC+GGG - chr2_4:62105861-62105880 None:intergenic 25.0%
!! GAAAAGAGGTTTTTATAATC+TGG - chr2_4:62105873-62105892 None:intergenic 25.0%
! TTAAATTACACCAACATACA+AGG - chr2_4:62105949-62105968 None:intergenic 25.0%
! TGCTATATTGTCTTATAATG+AGG + chr2_4:62106091-62106110 Msa0340710:CDS 25.0%
! CAAAAGTCAATACTAGATTA+AGG + chr2_4:62106114-62106133 Msa0340710:CDS 25.0%
!! AAAAAAGAGTATATCCAAAC+AGG - chr2_4:62106142-62106161 None:intergenic 25.0%
! TACTATTAACACCAAAAAAG+TGG - chr2_4:62106171-62106190 None:intergenic 25.0%
! GAAAATCAAAATCATCCTAA+AGG - chr2_4:62106237-62106256 None:intergenic 25.0%
!! TGGCAATTTAGAACTATAAT+CGG - chr2_4:62106431-62106450 None:intergenic 25.0%
! AACACAATTGCAATTATGAA+TGG - chr2_4:62106451-62106470 None:intergenic 25.0%
! TGACCATAAATTGTTATGTT+TGG + chr2_4:62106578-62106597 Msa0340710:intron 25.0%
! ATCTATGATACTTACATCTA+TGG + chr2_4:62106847-62106866 Msa0340710:intron 25.0%
! CAATAGCAACAAATAAGAAT+TGG - chr2_4:62107077-62107096 None:intergenic 25.0%
! GAAAGAAATAGTACTTCTTT+AGG - chr2_4:62107339-62107358 None:intergenic 25.0%
! ATAGTGTCAATGCATAAATT+AGG - chr2_4:62107525-62107544 None:intergenic 25.0%
! ATTTCAAGAATTTCAAGAGT+GGG - chr2_4:62107835-62107854 None:intergenic 25.0%
! AATTTCAAGAATTTCAAGAG+TGG - chr2_4:62107836-62107855 None:intergenic 25.0%
! ACTCTTGAAATTCTTGAAAT+TGG + chr2_4:62107835-62107854 Msa0340710:CDS 25.0%
!!! TTTTATTTCACTGCAAAGTA+TGG + chr2_4:62107914-62107933 Msa0340710:CDS 25.0%
! ATAATGTTGACATCATTCTT+GGG + chr2_4:62107953-62107972 Msa0340710:CDS 25.0%
! ACTACTATAATATACTCTCA+AGG - chr2_4:62108043-62108062 None:intergenic 25.0%
! AGAGATATGATATGGTTAAA+TGG + chr2_4:62108463-62108482 Msa0340710:three_prime_UTR 25.0%
! TAATTTCAAAATGGCTGTAT+TGG + chr2_4:62108707-62108726 Msa0340710:three_prime_UTR 25.0%
! TCTATCTTCCTTTTTGTGTA+TGG + chr2_4:62104605-62104624 Msa0340710:intron 30.0%
TACATCTTGCAAATCAAGTA+TGG - chr2_4:62104638-62104657 None:intergenic 30.0%
TCTAGAGGTTTATGCTTAAT+TGG + chr2_4:62105143-62105162 Msa0340710:intron 30.0%
!!! TGTTTTACGTTTTGGTTTTG+TGG - chr2_4:62105596-62105615 None:intergenic 30.0%
!!! TTGTTAACCCATCGATTTTT+CGG - chr2_4:62105895-62105914 None:intergenic 30.0%
ACTTTGATTCCTTTACCTTT+AGG + chr2_4:62106219-62106238 Msa0340710:intron 30.0%
CAAAATCATCCTAAAGGTAA+AGG - chr2_4:62106231-62106250 None:intergenic 30.0%
ATTGGTATATGTGCAATTAG+TGG + chr2_4:62106316-62106335 Msa0340710:CDS 30.0%
! TTTTGTATCCATACATCTGT+CGG - chr2_4:62106692-62106711 None:intergenic 30.0%
TGTAATTAACCTTAAAGCAG+AGG - chr2_4:62106925-62106944 None:intergenic 30.0%
! AGCAGCATTTGATAATTCTA+AGG + chr2_4:62106947-62106966 Msa0340710:CDS 30.0%
! GCATTTGATAATTCTAAGGA+TGG + chr2_4:62106951-62106970 Msa0340710:CDS 30.0%
AAGCTCAAAGAATGTTGATA+TGG - chr2_4:62107187-62107206 None:intergenic 30.0%
! GTACTTCTTTAGGTATTGTT+TGG - chr2_4:62107329-62107348 None:intergenic 30.0%
TTACCAAAGATTTAAAAGGC+AGG - chr2_4:62107618-62107637 None:intergenic 30.0%
TTTATCTACAGCAATCCATT+AGG - chr2_4:62107698-62107717 None:intergenic 30.0%
TAATTGCAATGTACAATGTG+TGG + chr2_4:62107789-62107808 Msa0340710:CDS 30.0%
AATTGCAATGTACAATGTGT+GGG + chr2_4:62107790-62107809 Msa0340710:CDS 30.0%
TTTGCAGTGAAATAAAATGC+TGG - chr2_4:62107911-62107930 None:intergenic 30.0%
GATAATGTTGACATCATTCT+TGG + chr2_4:62107952-62107971 Msa0340710:CDS 30.0%
TAATGTTGACATCATTCTTG+GGG + chr2_4:62107954-62107973 Msa0340710:CDS 30.0%
!! AGTAGTGTTTAATTTGGAAC+CGG + chr2_4:62108057-62108076 Msa0340710:intron 30.0%
!! TTATGCTTTAAGGATATTGG+TGG - chr2_4:62108177-62108196 None:intergenic 30.0%
GATCTGGTATTTATGCTTTA+AGG - chr2_4:62108187-62108206 None:intergenic 30.0%
TTTCATATAGTATAGGGATC+TGG - chr2_4:62108203-62108222 None:intergenic 30.0%
TTTCTCCATGGTAGATTTAT+AGG + chr2_4:62108564-62108583 Msa0340710:three_prime_UTR 30.0%
TTTATTATTACGCTTGGACA+TGG - chr2_4:62108604-62108623 None:intergenic 30.0%
!!! GCATTTTGTGTTAATTTGCT+TGG - chr2_4:62108653-62108672 None:intergenic 30.0%
ACACAAAATGCATTGAAGTA+TGG + chr2_4:62108662-62108681 Msa0340710:three_prime_UTR 30.0%
GATAGAAGAGCAAAGACTTT+AGG - chr2_4:62104591-62104610 None:intergenic 35.0%
GTGATAGACCATACACAAAA+AGG - chr2_4:62104616-62104635 None:intergenic 35.0%
CAGATTGAAGCCTTAAATTG+AGG + chr2_4:62105040-62105059 Msa0340710:intron 35.0%
GGGAAAATATGCTGCAATAT+TGG + chr2_4:62105249-62105268 Msa0340710:intron 35.0%
ATATTGGTATGCTTCCTTCT+TGG + chr2_4:62105265-62105284 Msa0340710:CDS 35.0%
AAGAACCTGAGTTCAATTTC+TGG + chr2_4:62105803-62105822 Msa0340710:intron 35.0%
TTCTACCAGAAATTGAACTC+AGG - chr2_4:62105811-62105830 None:intergenic 35.0%
! CTCTTTTCCGAAAAATCGAT+GGG + chr2_4:62105885-62105904 Msa0340710:intron 35.0%
ACTAGATTAAGGAACCTGTT+TGG + chr2_4:62106125-62106144 Msa0340710:CDS 35.0%
TAGTTGGATTTAGCAACATC+TGG + chr2_4:62106271-62106290 Msa0340710:intron 35.0%
GATTTAGCAACATCTGGTAA+AGG + chr2_4:62106277-62106296 Msa0340710:CDS 35.0%
!! AATGAATTCTGGCTTCATGT+AGG - chr2_4:62106395-62106414 None:intergenic 35.0%
ATTCAATTCCGACAGATGTA+TGG + chr2_4:62106681-62106700 Msa0340710:intron 35.0%
TAAGCGTGAGTTTGATTATG+CGG - chr2_4:62106828-62106847 None:intergenic 35.0%
ATGTTACAGTCTTTCCTATG+TGG + chr2_4:62106876-62106895 Msa0340710:intron 35.0%
! TCTAAGGATGGTCTTAGAAA+AGG + chr2_4:62106963-62106982 Msa0340710:CDS 35.0%
GTACGGTAGTATTTCACAAT+TGG - chr2_4:62107249-62107268 None:intergenic 35.0%
! TGAGAAAGTTTGAGACACAT+TGG - chr2_4:62107376-62107395 None:intergenic 35.0%
!!! ATTTCCCTTTTTTCAGGATG+AGG + chr2_4:62107423-62107442 Msa0340710:intron 35.0%
TGATCCTCATCCTGAAAAAA+GGG - chr2_4:62107430-62107449 None:intergenic 35.0%
ATGATCCTCATCCTGAAAAA+AGG - chr2_4:62107431-62107450 None:intergenic 35.0%
! TTGACACTATCTATTTTCCC+TGG + chr2_4:62107535-62107554 Msa0340710:CDS 35.0%
TATCTTCAGACAGAAATCCA+GGG - chr2_4:62107555-62107574 None:intergenic 35.0%
! CTACCTGCCTTTTAAATCTT+TGG + chr2_4:62107612-62107631 Msa0340710:intron 35.0%
! TTTTACGAATCGAAACGACA+AGG + chr2_4:62107665-62107684 Msa0340710:intron 35.0%
TACAATGTGTGGGATCTAAT+AGG + chr2_4:62107800-62107819 Msa0340710:CDS 35.0%
ATGTCATAACACAAACAGTG+AGG - chr2_4:62107994-62108013 None:intergenic 35.0%
GGTCTTACCTTATAACCTTT+GGG - chr2_4:62108022-62108041 None:intergenic 35.0%
AGGTCTTACCTTATAACCTT+TGG - chr2_4:62108023-62108042 None:intergenic 35.0%
GATGGCTGTTTGATCAAAAT+CGG + chr2_4:62108119-62108138 Msa0340710:intron 35.0%
TTGATCAAAATCGGATAGTC+TGG + chr2_4:62108128-62108147 Msa0340710:intron 35.0%
!! TTTCCCAAAGCATTTTGTTC+TGG - chr2_4:62108269-62108288 None:intergenic 35.0%
!! AAATGCTTTGGGAAACTTGT+TGG + chr2_4:62108274-62108293 Msa0340710:CDS 35.0%
!! TTGTTGGTGTTGTTTCTACT+TGG + chr2_4:62108290-62108309 Msa0340710:CDS 35.0%
!!! TACTTGGAGGTATTTTTGCA+GGG + chr2_4:62108306-62108325 Msa0340710:CDS 35.0%
TCTCAATAAGCACAAACTAC+AGG + chr2_4:62108373-62108392 Msa0340710:three_prime_UTR 35.0%
TACAGGAATAGTTGTGATTG+AGG + chr2_4:62108390-62108409 Msa0340710:three_prime_UTR 35.0%
GGTTAAATGGCACAACAAAA+AGG + chr2_4:62108476-62108495 Msa0340710:three_prime_UTR 35.0%
!! GTGTATGTGTCATTTACACA+AGG + chr2_4:62108498-62108517 Msa0340710:three_prime_UTR 35.0%
!! ATGTGTCATTTACACAAGGA+AGG + chr2_4:62108502-62108521 Msa0340710:three_prime_UTR 35.0%
!! TGTGTCATTTACACAAGGAA+GGG + chr2_4:62108503-62108522 Msa0340710:three_prime_UTR 35.0%
TACCTCCTATAAATCTACCA+TGG - chr2_4:62108572-62108591 None:intergenic 35.0%
AAATGCATTGAAGTATGGTG+AGG + chr2_4:62108667-62108686 Msa0340710:three_prime_UTR 35.0%
! TTGAATTTTCTGCGCTTTAG+TGG + chr2_4:62108738-62108757 Msa0340710:three_prime_UTR 35.0%
GTACACTCGTGTGTCATAAA+AGG + chr2_4:62104456-62104475 Msa0340710:intron 40.0%
! GAAGAGCAAAGACTTTAGGA+AGG - chr2_4:62104587-62104606 None:intergenic 40.0%
AATAATTCAAGGCAGAGCCA+TGG + chr2_4:62105098-62105117 Msa0340710:exon 40.0%
AAAGACATCCATTGCCAAGA+AGG - chr2_4:62105282-62105301 None:intergenic 40.0%
! GCAATGGATGTCTTTTCTCT+TGG + chr2_4:62105287-62105306 Msa0340710:CDS 40.0%
TCGCTAAGCTCAATCTATGT+TGG - chr2_4:62105493-62105512 None:intergenic 40.0%
AACCAAGAAATTTCCCCAAG+TGG + chr2_4:62105753-62105772 Msa0340710:intron 40.0%
TCTCAGATCATTGACCACTT+GGG - chr2_4:62105770-62105789 None:intergenic 40.0%
TTCTCAGATCATTGACCACT+TGG - chr2_4:62105771-62105790 None:intergenic 40.0%
ATCGGGAAGTAAGTAAAGTC+TGG - chr2_4:62105844-62105863 None:intergenic 40.0%
!!! CCATCGATTTTTCGGAAAAG+AGG - chr2_4:62105887-62105906 None:intergenic 40.0%
! CCTCTTTTCCGAAAAATCGA+TGG + chr2_4:62105884-62105903 Msa0340710:intron 40.0%
ATGTGCTTCTCCTTGTATGT+TGG + chr2_4:62105936-62105955 Msa0340710:intron 40.0%
GGATGATAATTCTGCACATG+AGG - chr2_4:62106023-62106042 None:intergenic 40.0%
TTAGCAACATCTGGTAAAGG+AGG + chr2_4:62106280-62106299 Msa0340710:CDS 40.0%
! GGAGGACTTGGAACTTTTAT+TGG + chr2_4:62106298-62106317 Msa0340710:CDS 40.0%
CATGTTCAAGGTGGAATGAT+TGG + chr2_4:62106361-62106380 Msa0340710:CDS 40.0%
CATGAAGCCAGAATTCATTC+AGG + chr2_4:62106396-62106415 Msa0340710:CDS 40.0%
TAGCTGACCTGAATGAATTC+TGG - chr2_4:62106406-62106425 None:intergenic 40.0%
! CTGCATTTTACGCGATATCA+AGG + chr2_4:62106478-62106497 Msa0340710:intron 40.0%
ACAGTCTTTCCTATGTGGTT+TGG + chr2_4:62106881-62106900 Msa0340710:intron 40.0%
GTGCATTAACCTCTGCTTTA+AGG + chr2_4:62106913-62106932 Msa0340710:CDS 40.0%
!!! CTTCTGATGCTGCTTTTGTA+CGG - chr2_4:62107266-62107285 None:intergenic 40.0%
AGCATCAGAAGGATCCAAAA+CGG + chr2_4:62107275-62107294 Msa0340710:CDS 40.0%
! AAGATCAGCTGAAACCGTTT+TGG - chr2_4:62107292-62107311 None:intergenic 40.0%
ATCATGCACACAAACAAGAG+AGG + chr2_4:62107446-62107465 Msa0340710:CDS 40.0%
GTATCTTCAGACAGAAATCC+AGG - chr2_4:62107556-62107575 None:intergenic 40.0%
GGATTTCTGTCTGAAGATAC+CGG + chr2_4:62107556-62107575 Msa0340710:CDS 40.0%
TGTTCCTAAACTATGTGCTC+CGG - chr2_4:62107578-62107597 None:intergenic 40.0%
GAGCACATAGTTTAGGAACA+TGG + chr2_4:62107578-62107597 Msa0340710:CDS 40.0%
ACTGCAAAGTATGGTGATCA+AGG + chr2_4:62107923-62107942 Msa0340710:CDS 40.0%
CAAAGTATGGTGATCAAGGT+TGG + chr2_4:62107927-62107946 Msa0340710:CDS 40.0%
ACAAACAGTGAGGTAACCAT+TGG - chr2_4:62107984-62108003 None:intergenic 40.0%
ATCTGCACCCAAAGGTTATA+AGG + chr2_4:62108012-62108031 Msa0340710:CDS 40.0%
ATATCTCGAATGCGTGAATG+CGG - chr2_4:62108098-62108117 None:intergenic 40.0%
!!! ACCGTTCGGTTTTGATTGAA+CGG + chr2_4:62108151-62108170 Msa0340710:intron 40.0%
GGTCCAGAACAAAATGCTTT+GGG + chr2_4:62108263-62108282 Msa0340710:CDS 40.0%
!! TTGGTGTTGTTTCTACTTGG+AGG + chr2_4:62108293-62108312 Msa0340710:CDS 40.0%
!!! CTACTTGGAGGTATTTTTGC+AGG + chr2_4:62108305-62108324 Msa0340710:CDS 40.0%
!!! ACTTGGAGGTATTTTTGCAG+GGG + chr2_4:62108307-62108326 Msa0340710:CDS 40.0%
!! GTGTCATTTACACAAGGAAG+GGG + chr2_4:62108504-62108523 Msa0340710:three_prime_UTR 40.0%
! TAAAAGGGTCTGTTTCTCCA+TGG + chr2_4:62108552-62108571 Msa0340710:three_prime_UTR 40.0%
CTCCATGGTAGATTTATAGG+AGG + chr2_4:62108567-62108586 Msa0340710:three_prime_UTR 40.0%
CAAACATGAACACGCCAAGA+AGG - chr2_4:62104289-62104308 None:intergenic 45.0%
TGTCTTTCTCAGCACTTCTG+TGG + chr2_4:62104307-62104326 Msa0340710:five_prime_UTR 45.0%
TAAACCTCTAGACGTGTTGG+AGG - chr2_4:62105135-62105154 None:intergenic 45.0%
GCATAAACCTCTAGACGTGT+TGG - chr2_4:62105138-62105157 None:intergenic 45.0%
GTATGCTTCCTTCTTGGCAA+TGG + chr2_4:62105271-62105290 Msa0340710:CDS 45.0%
GACCACTTGGGGAAATTTCT+TGG - chr2_4:62105758-62105777 None:intergenic 45.0%
CTCAGATCATTGACCACTTG+GGG - chr2_4:62105769-62105788 None:intergenic 45.0%
TGCAGAATTATCATCCCTCC+AGG + chr2_4:62106027-62106046 Msa0340710:intron 45.0%
GCAGAATTATCATCCCTCCA+GGG + chr2_4:62106028-62106047 Msa0340710:intron 45.0%
GTATACAAGTGTAAGCACCC+TGG - chr2_4:62106048-62106067 None:intergenic 45.0%
GTATACCAGCCATTTGCAGT+TGG + chr2_4:62106062-62106081 Msa0340710:CDS 45.0%
GCAAGTGTTCCAACTGCAAA+TGG - chr2_4:62106074-62106093 None:intergenic 45.0%
ACATCTGGTAAAGGAGGACT+TGG + chr2_4:62106286-62106305 Msa0340710:CDS 45.0%
TGTGCAATTAGTGGTGCCTT+TGG + chr2_4:62106325-62106344 Msa0340710:CDS 45.0%
ATGAGCATCTGCAACTCCAA+AGG - chr2_4:62106344-62106363 None:intergenic 45.0%
GTTGCAGATGCTCATGTTCA+AGG + chr2_4:62106349-62106368 Msa0340710:CDS 45.0%
CGTACAAAAGCAGCATCAGA+AGG + chr2_4:62107264-62107283 Msa0340710:CDS 45.0%
TGCACACAAACAAGAGAGGA+AGG + chr2_4:62107450-62107469 Msa0340710:CDS 45.0%
GCACACAAACAAGAGAGGAA+GGG + chr2_4:62107451-62107470 Msa0340710:CDS 45.0%
ACAAGAGAGGAAGGGAAACA+AGG + chr2_4:62107459-62107478 Msa0340710:CDS 45.0%
GATACCGGAGCACATAGTTT+AGG + chr2_4:62107571-62107590 Msa0340710:CDS 45.0%
TACAGCAATCCATTAGGCGT+TGG - chr2_4:62107692-62107711 None:intergenic 45.0%
TCATTCTTGGGGCTATCCAA+TGG + chr2_4:62107965-62107984 Msa0340710:CDS 45.0%
GTTATGACATCTGCACCCAA+AGG + chr2_4:62108004-62108023 Msa0340710:CDS 45.0%
TATCTCGAATGCGTGAATGC+GGG - chr2_4:62108097-62108116 None:intergenic 45.0%
TCACGCATTCGAGATATCGA+TGG + chr2_4:62108101-62108120 Msa0340710:intron 45.0%
GCCGTTCAATCAAAACCGAA+CGG - chr2_4:62108155-62108174 None:intergenic 45.0%
GGGTCCAGAACAAAATGCTT+TGG + chr2_4:62108262-62108281 Msa0340710:intron 45.0%
! CTAGACTGGTTGTGGTTGAT+AGG + chr2_4:62108335-62108354 Msa0340710:CDS 45.0%
!! TGGTTGTGGTTGATAGGCAA+AGG + chr2_4:62108341-62108360 Msa0340710:CDS 45.0%
!! TGTGGTTGATAGGCAAAGGT+TGG + chr2_4:62108345-62108364 Msa0340710:CDS 45.0%
TCTGCGCTTTAGTGGTTCAT+CGG + chr2_4:62108746-62108765 Msa0340710:three_prime_UTR 45.0%
!!! ATATATATATATTTTCTTTT+TGG - chr2_4:62104943-62104962 None:intergenic 5.0%
!! GTAATTAAATTATTATAAAT+TGG - chr2_4:62105688-62105707 None:intergenic 5.0%
!!! AATTTGAAATTAAAATAAAA+TGG - chr2_4:62107646-62107665 None:intergenic 5.0%
!!! AATTTTTTTAACAAATAAAA+GGG + chr2_4:62108537-62108556 Msa0340710:three_prime_UTR 5.0%
GACTCTTCCCTCTTCCTTCT+TGG + chr2_4:62104272-62104291 Msa0340710:five_prime_UTR 50.0%
GAACACGCCAAGAAGGAAGA+GGG - chr2_4:62104282-62104301 None:intergenic 50.0%
TGAACACGCCAAGAAGGAAG+AGG - chr2_4:62104283-62104302 None:intergenic 50.0%
ACAAGTGTAAGCACCCTGGA+GGG - chr2_4:62106044-62106063 None:intergenic 50.0%
TACAAGTGTAAGCACCCTGG+AGG - chr2_4:62106045-62106064 None:intergenic 50.0%
GTGTTCCAACTGCAAATGGC+TGG - chr2_4:62106070-62106089 None:intergenic 50.0%
GCAGATGCTCATGTTCAAGG+TGG + chr2_4:62106352-62106371 Msa0340710:CDS 50.0%
CAGATGCTGCCAAACCACAT+AGG - chr2_4:62106893-62106912 None:intergenic 50.0%
! CTATGTGGTTTGGCAGCATC+TGG + chr2_4:62106891-62106910 Msa0340710:intron 50.0%
GTTTCAGCTGATCTTGCAGC+TGG + chr2_4:62107297-62107316 Msa0340710:CDS 50.0%
! TTAATTTGGAACCGGCTCCC+TGG + chr2_4:62108065-62108084 Msa0340710:intron 50.0%
! TAATTTGGAACCGGCTCCCT+GGG + chr2_4:62108066-62108085 Msa0340710:intron 50.0%
ATCGGATAGTCTGGACCGTT+CGG + chr2_4:62108137-62108156 Msa0340710:intron 50.0%
TTGCAGGGGTTACACTAGAC+TGG + chr2_4:62108321-62108340 Msa0340710:CDS 50.0%
! GGGTTACACTAGACTGGTTG+TGG + chr2_4:62108327-62108346 Msa0340710:CDS 50.0%
TGGAGGCTCAACGTTGACCA+TGG - chr2_4:62105118-62105137 None:intergenic 55.0%
TGAGCCTCCAACACGTCTAG+AGG + chr2_4:62105128-62105147 Msa0340710:CDS 55.0%
TCAGCTGATCTTGCAGCTGG+TGG + chr2_4:62107300-62107319 Msa0340710:CDS 55.0%
CGACAAGGACCAACGCCTAA+TGG + chr2_4:62107680-62107699 Msa0340710:intron 55.0%
! AATTTGGAACCGGCTCCCTG+GGG + chr2_4:62108067-62108086 Msa0340710:intron 55.0%
GTGAATGCGGGAAATCCCCA+GGG - chr2_4:62108085-62108104 None:intergenic 55.0%
CGTGAATGCGGGAAATCCCC+AGG - chr2_4:62108086-62108105 None:intergenic 60.0%
GCGGGAAATCCCCAGGGAGC+CGG - chr2_4:62108079-62108098 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 62104207 62108825 62104207 ID=Msa0340710;Name=Msa0340710
chr2_4 mRNA 62104207 62108825 62104207 ID=Msa0340710-mRNA-1;Parent=Msa0340710;Name=Msa0340710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=191|0.88|0.9|1|0.88|0.8|10|455|413
chr2_4 exon 62104207 62104361 62104207 ID=Msa0340710-mRNA-1:exon:19704;Parent=Msa0340710-mRNA-1
chr2_4 exon 62105081 62105149 62105081 ID=Msa0340710-mRNA-1:exon:19705;Parent=Msa0340710-mRNA-1
chr2_4 exon 62105250 62105354 62105250 ID=Msa0340710-mRNA-1:exon:19706;Parent=Msa0340710-mRNA-1
chr2_4 exon 62106032 62106187 62106032 ID=Msa0340710-mRNA-1:exon:19707;Parent=Msa0340710-mRNA-1
chr2_4 exon 62106274 62106436 62106274 ID=Msa0340710-mRNA-1:exon:19708;Parent=Msa0340710-mRNA-1
chr2_4 exon 62106907 62106990 62106907 ID=Msa0340710-mRNA-1:exon:19709;Parent=Msa0340710-mRNA-1
chr2_4 exon 62107172 62107344 62107172 ID=Msa0340710-mRNA-1:exon:19710;Parent=Msa0340710-mRNA-1
chr2_4 exon 62107439 62107599 62107439 ID=Msa0340710-mRNA-1:exon:19711;Parent=Msa0340710-mRNA-1
chr2_4 exon 62107775 62108033 62107775 ID=Msa0340710-mRNA-1:exon:19712;Parent=Msa0340710-mRNA-1
chr2_4 exon 62108263 62108825 62108263 ID=Msa0340710-mRNA-1:exon:19713;Parent=Msa0340710-mRNA-1
chr2_4 five_prime_UTR 62104207 62104361 62104207 ID=Msa0340710-mRNA-1:five_prime_utr;Parent=Msa0340710-mRNA-1
chr2_4 five_prime_UTR 62105081 62105116 62105081 ID=Msa0340710-mRNA-1:five_prime_utr;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62105117 62105149 62105117 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62105250 62105354 62105250 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62106032 62106187 62106032 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62106274 62106436 62106274 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62106907 62106990 62106907 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62107172 62107344 62107172 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62107439 62107599 62107439 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62107775 62108033 62107775 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 CDS 62108263 62108370 62108263 ID=Msa0340710-mRNA-1:cds;Parent=Msa0340710-mRNA-1
chr2_4 three_prime_UTR 62108371 62108825 62108371 ID=Msa0340710-mRNA-1:three_prime_utr;Parent=Msa0340710-mRNA-1
Gene Sequence

>Msa0340710

ATGGTCAACGTTGAGCCTCCAACACGTCTAGAGGGAAAATATGCTGCAATATTGGTATGCTTCCTTCTTGGCAATGGATGTCTTTTCTCTTGGAACAGTATGCTCACAATAGAAGATTACTACATTTACTTGTTTCCGAATTATCATCCCTCCAGGGTGCTTACACTTGTATACCAGCCATTTGCAGTTGGAACACTTGCTATATTGTCTTATAATGAGGCAAAAGTCAATACTAGATTAAGGAACCTGTTTGGATATACTCTTTTTTTCATAACCACTTTTTTGGTGTTAATATTGGATTTAGCAACATCTGGTAAAGGAGGACTTGGAACTTTTATTGGTATATGTGCAATTAGTGGTGCCTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGATTGGAGACTTGTCCTACATGAAGCCAGAATTCATTCAGGTCAGCTATACCGATTATACATCTGGTGCATTAACCTCTGCTTTAAGGTTAATTACAAAAGCAGCATTTGATAATTCTAAGGATGGTCTTAGAAAAGGAGCTATTCTATTCTTTGCCATATCAACATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATTTGTTTTTCCTAAAATACCAATTGTGAAATACTACCGTACAAAAGCAGCATCAGAAGGATCCAAAACGGTTTCAGCTGATCTTGCAGCTGGTGGCATCCAAACAATACCTAAAGAAGATGAGGATCATGCACACAAACAAGAGAGGAAGGGAAACAAGGAATTGTTTTTTGAAAACATTGATTATTTACTTGATATGTTCCTAATTTATGCATTGACACTATCTATTTTCCCTGGATTTCTGTCTGAAGATACCGGAGCACATAGTTTAGGAACATGGTATGCTCTTGTGTTAATTGCAATGTACAATGTGTGGGATCTAATAGGAAGATACATCCCACTCTTGAAATTCTTGAAATTGGAGTCAAGAAAGATGATCACAGTAGCAATACTATGTCGTTTCTTACTTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGATCAAGGTTGGATGATAATGTTGACATCATTCTTGGGGCTATCCAATGGTTACCTCACTGTTTGTGTTATGACATCTGCACCCAAAGGTTATAAGGGTCCAGAACAAAATGCTTTGGGAAACTTGTTGGTGTTGTTTCTACTTGGAGGTATTTTTGCAGGGGTTACACTAGACTGGTTGTGGTTGATAGGCAAAGGTTGGTGA

Protein sequence

>Msa0340710

MVNVEPPTRLEGKYAAILVCFLLGNGCLFSWNSMLTIEDYYIYLFPNYHPSRVLTLVYQPFAVGTLAILSYNEAKVNTRLRNLFGYTLFFITTFLVLILDLATSGKGGLGTFIGICAISGAFGVADAHVQGGMIGDLSYMKPEFIQVSYTDYTSGALTSALRLITKAAFDNSKDGLRKGAILFFAISTFFELLCVLLYAFVFPKIPIVKYYRTKAASEGSKTVSADLAAGGIQTIPKEDEDHAHKQERKGNKELFFENIDYLLDMFLIYALTLSIFPGFLSEDTGAHSLGTWYALVLIAMYNVWDLIGRYIPLLKFLKLESRKMITVAILCRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW*