Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970230 | XP_013447476.1 | 94.898 | 98 | 5 | 0 | 1 | 98 | 1 | 98 | 3.05e-52 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970230 | sp|P82353|NLTP2_PRUAR | 67.647 | 68 | 22 | 0 | 31 | 98 | 1 | 68 | 1.53e-29 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970230 | A0A072TVT5 | 94.898 | 98 | 5 | 0 | 1 | 98 | 1 | 98 | 1.46e-52 | 169 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015460 | Msa0970230 | 0.829250 | 5.719431e-55 | -8.615850e-47 |
| Msa0015480 | Msa0970230 | 0.825324 | 4.988128e-54 | -8.615850e-47 |
| Msa0017320 | Msa0970230 | 0.817210 | 3.711283e-52 | -8.615850e-47 |
| Msa0032080 | Msa0970230 | 0.812071 | 5.099173e-51 | -8.615850e-47 |
| Msa0037540 | Msa0970230 | -0.803896 | 2.801051e-49 | -8.615850e-47 |
| Msa0037590 | Msa0970230 | -0.801301 | 9.603558e-49 | -8.615850e-47 |
| Msa0051210 | Msa0970230 | 0.801354 | 9.368617e-49 | -8.615850e-47 |
| Msa0051450 | Msa0970230 | 0.811138 | 8.132302e-51 | -8.615850e-47 |
| Msa0054260 | Msa0970230 | 0.839619 | 1.422087e-57 | -8.615850e-47 |
| Msa0054310 | Msa0970230 | 0.827161 | 1.823174e-54 | -8.615850e-47 |
| Msa0057890 | Msa0970230 | 0.815859 | 7.449332e-52 | -8.615850e-47 |
| Msa0061500 | Msa0970230 | 0.826136 | 3.201506e-54 | -8.615850e-47 |
| Msa0064700 | Msa0970230 | 0.805190 | 1.504697e-49 | -8.615850e-47 |
| Msa0065650 | Msa0970230 | 0.804841 | 1.779994e-49 | -8.615850e-47 |
| Msa0078830 | Msa0970230 | 0.845720 | 3.406393e-59 | -8.615850e-47 |
| Msa0081650 | Msa0970230 | 0.831189 | 1.922275e-55 | -8.615850e-47 |
| Msa0090570 | Msa0970230 | 0.803865 | 2.842062e-49 | -8.615850e-47 |
| Msa0092410 | Msa0970230 | 0.842926 | 1.918651e-58 | -8.615850e-47 |
| Msa0100080 | Msa0970230 | 0.821526 | 3.853518e-53 | -8.615850e-47 |
| Msa0100090 | Msa0970230 | 0.853181 | 2.830814e-61 | -8.615850e-47 |
| Msa0101830 | Msa0970230 | 0.813872 | 2.054177e-51 | -8.615850e-47 |
| Msa0103250 | Msa0970230 | 0.801250 | 9.837036e-49 | -8.615850e-47 |
| Msa0109590 | Msa0970230 | 0.847069 | 1.459770e-59 | -8.615850e-47 |
| Msa0111080 | Msa0970230 | 0.801831 | 7.477534e-49 | -8.615850e-47 |
| Msa0118540 | Msa0970230 | 0.800809 | 1.210886e-48 | -8.615850e-47 |
| Msa0610130 | Msa0970230 | 0.809561 | 1.780904e-50 | -8.615850e-47 |
| Msa0610180 | Msa0970230 | 0.800486 | 1.408935e-48 | -8.615850e-47 |
| Msa0613340 | Msa0970230 | 0.810067 | 1.385646e-50 | -8.615850e-47 |
| Msa0614920 | Msa0970230 | 0.852392 | 4.757014e-61 | -8.615850e-47 |
| Msa0615220 | Msa0970230 | 0.810263 | 1.257150e-50 | -8.615850e-47 |
| Msa0620620 | Msa0970230 | 0.853604 | 2.141005e-61 | -8.615850e-47 |
| Msa0624960 | Msa0970230 | 0.804477 | 2.120090e-49 | -8.615850e-47 |
| Msa0626850 | Msa0970230 | 0.812844 | 3.455250e-51 | -8.615850e-47 |
| Msa0641320 | Msa0970230 | 0.804049 | 2.602723e-49 | -8.615850e-47 |
| Msa0648860 | Msa0970230 | 0.824360 | 8.421040e-54 | -8.615850e-47 |
| Msa0658990 | Msa0970230 | 0.801621 | 8.259361e-49 | -8.615850e-47 |
| Msa0664970 | Msa0970230 | 0.807532 | 4.828694e-50 | -8.615850e-47 |
| Msa0667740 | Msa0970230 | 0.801576 | 8.436031e-49 | -8.615850e-47 |
| Msa0678090 | Msa0970230 | 0.809646 | 1.707357e-50 | -8.615850e-47 |
| Msa0679810 | Msa0970230 | 0.808238 | 3.416537e-50 | -8.615850e-47 |
| Msa0689780 | Msa0970230 | 0.822860 | 1.889258e-53 | -8.615850e-47 |
| Msa0696450 | Msa0970230 | 0.801330 | 9.472685e-49 | -8.615850e-47 |
| Msa0703910 | Msa0970230 | 0.802170 | 6.370435e-49 | -8.615850e-47 |
| Msa0708310 | Msa0970230 | 0.809461 | 1.870394e-50 | -8.615850e-47 |
| Msa0711150 | Msa0970230 | 0.869676 | 2.590691e-66 | -8.615850e-47 |
| Msa0715410 | Msa0970230 | 0.838708 | 2.449590e-57 | -8.615850e-47 |
| Msa0731180 | Msa0970230 | 0.808560 | 2.916552e-50 | -8.615850e-47 |
| Msa0738030 | Msa0970230 | 0.808993 | 2.357443e-50 | -8.615850e-47 |
| Msa0741070 | Msa0970230 | 0.802491 | 5.471716e-49 | -8.615850e-47 |
| Msa0742150 | Msa0970230 | 0.857815 | 1.261736e-62 | -8.615850e-47 |
| Msa0745070 | Msa0970230 | 0.817489 | 3.211275e-52 | -8.615850e-47 |
| Msa0750850 | Msa0970230 | 0.819098 | 1.388234e-52 | -8.615850e-47 |
| Msa0752070 | Msa0970230 | 0.821188 | 4.611230e-53 | -8.615850e-47 |
| Msa0771580 | Msa0970230 | 0.809485 | 1.848653e-50 | -8.615850e-47 |
| Msa0786070 | Msa0970230 | 0.839887 | 1.211152e-57 | -8.615850e-47 |
| Msa0805910 | Msa0970230 | 0.801203 | 1.005940e-48 | -8.615850e-47 |
| Msa0821190 | Msa0970230 | 0.808567 | 2.906984e-50 | -8.615850e-47 |
| Msa0823440 | Msa0970230 | 0.834733 | 2.526282e-56 | -8.615850e-47 |
| Msa0825870 | Msa0970230 | 0.833728 | 4.514874e-56 | -8.615850e-47 |
| Msa0826760 | Msa0970230 | 0.858444 | 8.201957e-63 | -8.615850e-47 |
| Msa0830230 | Msa0970230 | 0.873272 | 1.672045e-67 | -8.615850e-47 |
| Msa0127800 | Msa0970230 | 0.804566 | 2.031643e-49 | -8.615850e-47 |
| Msa0129190 | Msa0970230 | -0.804443 | 2.155289e-49 | -8.615850e-47 |
| Msa0130520 | Msa0970230 | 0.803565 | 3.281269e-49 | -8.615850e-47 |
| Msa0135410 | Msa0970230 | 0.829715 | 4.408825e-55 | -8.615850e-47 |
| Msa0138020 | Msa0970230 | 0.849115 | 3.977255e-60 | -8.615850e-47 |
| Msa0140100 | Msa0970230 | 0.837777 | 4.255237e-57 | -8.615850e-47 |
| Msa0141250 | Msa0970230 | 0.806936 | 6.457719e-50 | -8.615850e-47 |
| Msa0142280 | Msa0970230 | 0.803573 | 3.267869e-49 | -8.615850e-47 |
| Msa0143930 | Msa0970230 | 0.810088 | 1.371793e-50 | -8.615850e-47 |
| Msa0148720 | Msa0970230 | 0.803592 | 3.238401e-49 | -8.615850e-47 |
| Msa0152560 | Msa0970230 | 0.843896 | 1.056677e-58 | -8.615850e-47 |
| Msa0154920 | Msa0970230 | 0.803642 | 3.162446e-49 | -8.615850e-47 |
| Msa0155340 | Msa0970230 | 0.816259 | 6.065598e-52 | -8.615850e-47 |
| Msa0155880 | Msa0970230 | 0.808005 | 3.830230e-50 | -8.615850e-47 |
| Msa0160960 | Msa0970230 | 0.802918 | 4.466536e-49 | -8.615850e-47 |
| Msa0183850 | Msa0970230 | 0.804914 | 1.718212e-49 | -8.615850e-47 |
| Msa0186320 | Msa0970230 | 0.800677 | 1.288339e-48 | -8.615850e-47 |
| Msa0187020 | Msa0970230 | 0.810511 | 1.111436e-50 | -8.615850e-47 |
| Msa0187830 | Msa0970230 | 0.812516 | 4.075886e-51 | -8.615850e-47 |
| Msa0196670 | Msa0970230 | 0.804108 | 2.530660e-49 | -8.615850e-47 |
| Msa0197660 | Msa0970230 | 0.848873 | 4.643222e-60 | -8.615850e-47 |
| Msa0200850 | Msa0970230 | 0.859617 | 3.654956e-63 | -8.615850e-47 |
| Msa0201530 | Msa0970230 | 0.821049 | 4.963777e-53 | -8.615850e-47 |
| Msa0215590 | Msa0970230 | 0.853761 | 1.929646e-61 | -8.615850e-47 |
| Msa0217680 | Msa0970230 | 0.807654 | 4.548770e-50 | -8.615850e-47 |
| Msa0217700 | Msa0970230 | 0.854794 | 9.709777e-62 | -8.615850e-47 |
| Msa0220490 | Msa0970230 | 0.800359 | 1.495714e-48 | -8.615850e-47 |
| Msa0225470 | Msa0970230 | 0.835211 | 1.915050e-56 | -8.615850e-47 |
| Msa0225670 | Msa0970230 | 0.802153 | 6.422791e-49 | -8.615850e-47 |
| Msa0231060 | Msa0970230 | 0.828685 | 7.835911e-55 | -8.615850e-47 |
| Msa0233370 | Msa0970230 | 0.835107 | 2.034237e-56 | -8.615850e-47 |
| Msa0236070 | Msa0970230 | 0.819792 | 9.639943e-53 | -8.615850e-47 |
| Msa0369920 | Msa0970230 | 0.821874 | 3.201238e-53 | -8.615850e-47 |
| Msa0371950 | Msa0970230 | 0.825655 | 4.164725e-54 | -8.615850e-47 |
| Msa0383800 | Msa0970230 | 0.809386 | 1.941823e-50 | -8.615850e-47 |
| Msa0385490 | Msa0970230 | 0.811941 | 5.440511e-51 | -8.615850e-47 |
| Msa0387370 | Msa0970230 | 0.803807 | 2.921964e-49 | -8.615850e-47 |
| Msa0389210 | Msa0970230 | 0.808806 | 2.583839e-50 | -8.615850e-47 |
| Msa0391400 | Msa0970230 | 0.805811 | 1.114447e-49 | -8.615850e-47 |
| Msa0394470 | Msa0970230 | 0.822825 | 1.925038e-53 | -8.615850e-47 |
| Msa0403770 | Msa0970230 | 0.812420 | 4.278063e-51 | -8.615850e-47 |
| Msa0408300 | Msa0970230 | 0.818166 | 2.258813e-52 | -8.615850e-47 |
| Msa0410580 | Msa0970230 | 0.827436 | 1.565813e-54 | -8.615850e-47 |
| Msa0415420 | Msa0970230 | 0.842231 | 2.934282e-58 | -8.615850e-47 |
| Msa0417330 | Msa0970230 | 0.853759 | 1.932075e-61 | -8.615850e-47 |
| Msa0434180 | Msa0970230 | 0.810834 | 9.464375e-51 | -8.615850e-47 |
| Msa0438040 | Msa0970230 | 0.808470 | 3.048333e-50 | -8.615850e-47 |
| Msa0468320 | Msa0970230 | 0.818508 | 1.889924e-52 | -8.615850e-47 |
| Msa0239800 | Msa0970230 | 0.855598 | 5.664763e-62 | -8.615850e-47 |
| Msa0241140 | Msa0970230 | 0.814771 | 1.300214e-51 | -8.615850e-47 |
| Msa0243480 | Msa0970230 | 0.879177 | 1.541975e-69 | -8.615850e-47 |
| Msa0244140 | Msa0970230 | 0.834325 | 3.198911e-56 | -8.615850e-47 |
| Msa0244190 | Msa0970230 | 0.836492 | 9.066663e-57 | -8.615850e-47 |
| Msa0255850 | Msa0970230 | 0.830361 | 3.067046e-55 | -8.615850e-47 |
| Msa0257500 | Msa0970230 | 0.833139 | 6.331151e-56 | -8.615850e-47 |
| Msa0257520 | Msa0970230 | 0.816106 | 6.560142e-52 | -8.615850e-47 |
| Msa0267790 | Msa0970230 | 0.810104 | 1.360747e-50 | -8.615850e-47 |
| Msa0269560 | Msa0970230 | 0.830934 | 2.220489e-55 | -8.615850e-47 |
| Msa0270170 | Msa0970230 | -0.800930 | 1.143629e-48 | -8.615850e-47 |
| Msa0271550 | Msa0970230 | 0.806835 | 6.781039e-50 | -8.615850e-47 |
| Msa0277820 | Msa0970230 | 0.837809 | 4.173808e-57 | -8.615850e-47 |
| Msa0278580 | Msa0970230 | 0.817192 | 3.745040e-52 | -8.615850e-47 |
| Msa0281930 | Msa0970230 | 0.840575 | 8.003938e-58 | -8.615850e-47 |
| Msa0282680 | Msa0970230 | 0.802042 | 6.768697e-49 | -8.615850e-47 |
| Msa0284450 | Msa0970230 | 0.803587 | 3.246737e-49 | -8.615850e-47 |
| Msa0296820 | Msa0970230 | 0.820283 | 7.445034e-53 | -8.615850e-47 |
| Msa0299660 | Msa0970230 | 0.814482 | 1.506315e-51 | -8.615850e-47 |
| Msa0304100 | Msa0970230 | 0.804793 | 1.821114e-49 | -8.615850e-47 |
| Msa0310440 | Msa0970230 | 0.809060 | 2.280800e-50 | -8.615850e-47 |
| Msa0317510 | Msa0970230 | 0.846939 | 1.584883e-59 | -8.615850e-47 |
| Msa0319290 | Msa0970230 | 0.820534 | 6.519653e-53 | -8.615850e-47 |
| Msa0320430 | Msa0970230 | 0.844744 | 6.252082e-59 | -8.615850e-47 |
| Msa0321080 | Msa0970230 | 0.873612 | 1.284585e-67 | -8.615850e-47 |
| Msa0322680 | Msa0970230 | 0.805341 | 1.398930e-49 | -8.615850e-47 |
| Msa0333650 | Msa0970230 | 0.858101 | 1.037655e-62 | -8.615850e-47 |
| Msa0340690 | Msa0970230 | 0.823519 | 1.325866e-53 | -8.615850e-47 |
| Msa0340710 | Msa0970230 | 0.819757 | 9.822479e-53 | -8.615850e-47 |
| Msa0347750 | Msa0970230 | 0.815925 | 7.199293e-52 | -8.615850e-47 |
| Msa0357760 | Msa0970230 | 0.808133 | 3.597272e-50 | -8.615850e-47 |
| Msa0357790 | Msa0970230 | 0.816064 | 6.703754e-52 | -8.615850e-47 |
| Msa0357830 | Msa0970230 | 0.826467 | 2.670177e-54 | -8.615850e-47 |
| Msa0357840 | Msa0970230 | 0.823653 | 1.233853e-53 | -8.615850e-47 |
| Msa0357870 | Msa0970230 | 0.801781 | 7.658914e-49 | -8.615850e-47 |
| Msa0363790 | Msa0970230 | 0.801503 | 8.731173e-49 | -8.615850e-47 |
| Msa0485490 | Msa0970230 | 0.826578 | 2.512645e-54 | -8.615850e-47 |
| Msa0506860 | Msa0970230 | 0.800573 | 1.353002e-48 | -8.615850e-47 |
| Msa0507610 | Msa0970230 | 0.808767 | 2.635064e-50 | -8.615850e-47 |
| Msa0518380 | Msa0970230 | 0.802491 | 5.471716e-49 | -8.615850e-47 |
| Msa0518440 | Msa0970230 | 0.802602 | 5.189847e-49 | -8.615850e-47 |
| Msa0530100 | Msa0970230 | 0.812936 | 3.298920e-51 | -8.615850e-47 |
| Msa0532980 | Msa0970230 | 0.805916 | 1.059341e-49 | -8.615850e-47 |
| Msa0534150 | Msa0970230 | 0.802463 | 5.544564e-49 | -8.615850e-47 |
| Msa0534870 | Msa0970230 | 0.804970 | 1.672665e-49 | -8.615850e-47 |
| Msa0541040 | Msa0970230 | 0.840966 | 6.324785e-58 | -8.615850e-47 |
| Msa0545290 | Msa0970230 | 0.808574 | 2.897371e-50 | -8.615850e-47 |
| Msa0587030 | Msa0970230 | 0.815391 | 9.472097e-52 | -8.615850e-47 |
| Msa0592180 | Msa0970230 | 0.815500 | 8.956002e-52 | -8.615850e-47 |
| Msa0597000 | Msa0970230 | 0.835464 | 1.652376e-56 | -8.615850e-47 |
| Msa0600890 | Msa0970230 | 0.807685 | 4.480443e-50 | -8.615850e-47 |
| Msa0861470 | Msa0970230 | 0.819528 | 1.107641e-52 | -8.615850e-47 |
| Msa0861570 | Msa0970230 | 0.815721 | 7.996187e-52 | -8.615850e-47 |
| Msa0862280 | Msa0970230 | 0.828692 | 7.806712e-55 | -8.615850e-47 |
| Msa0865330 | Msa0970230 | 0.824713 | 6.953414e-54 | -8.615850e-47 |
| Msa0870060 | Msa0970230 | 0.800675 | 1.289672e-48 | -8.615850e-47 |
| Msa0876360 | Msa0970230 | 0.818169 | 2.255800e-52 | -8.615850e-47 |
| Msa0877710 | Msa0970230 | 0.802039 | 6.776790e-49 | -8.615850e-47 |
| Msa0880810 | Msa0970230 | 0.827703 | 1.351450e-54 | -8.615850e-47 |
| Msa0888260 | Msa0970230 | 0.819719 | 1.001768e-52 | -8.615850e-47 |
| Msa0894710 | Msa0970230 | 0.813239 | 2.830734e-51 | -8.615850e-47 |
| Msa0902830 | Msa0970230 | 0.815123 | 1.085948e-51 | -8.615850e-47 |
| Msa0932100 | Msa0970230 | 0.997522 | 4.800095e-244 | -8.615850e-47 |
| Msa0932190 | Msa0970230 | 0.980956 | 1.977549e-151 | -8.615850e-47 |
| Msa0935770 | Msa0970230 | 0.824343 | 8.496606e-54 | -8.615850e-47 |
| Msa0943190 | Msa0970230 | 0.806420 | 8.298734e-50 | -8.615850e-47 |
| Msa0960390 | Msa0970230 | 0.807506 | 4.889079e-50 | -8.615850e-47 |
| Msa0960740 | Msa0970230 | 0.806609 | 7.568797e-50 | -8.615850e-47 |
| Msa0970230 | Msa0972810 | 0.851012 | 1.170938e-60 | -8.615850e-47 |
| Msa0970230 | Msa0978700 | 0.815704 | 8.067425e-52 | -8.615850e-47 |
| Msa0970230 | Msa0980020 | 0.803052 | 4.190013e-49 | -8.615850e-47 |
| Msa0970230 | Msa0994370 | 0.806498 | 7.987738e-50 | -8.615850e-47 |
| Msa0970230 | Msa1001080 | 0.806024 | 1.005556e-49 | -8.615850e-47 |
| Msa0970230 | Msa1013070 | 0.802956 | 4.385116e-49 | -8.615850e-47 |
| Msa0970230 | Msa1023300 | 0.841664 | 4.142181e-58 | -8.615850e-47 |
| Msa0970230 | Msa1025080 | 0.816760 | 4.682808e-52 | -8.615850e-47 |
| Msa0970230 | Msa1052330 | 0.802803 | 4.716702e-49 | -8.615850e-47 |
| Msa0970230 | Msa1062030 | 0.809316 | 2.009380e-50 | -8.615850e-47 |
| Msa0970230 | Msa1071320 | 0.816153 | 6.405433e-52 | -8.615850e-47 |
| Msa0970230 | Msa1076960 | 0.809740 | 1.629668e-50 | -8.615850e-47 |
| Msa0970230 | Msa1077340 | 0.817957 | 2.518107e-52 | -8.615850e-47 |
| Msa0970230 | Msa1080960 | 0.800951 | 1.132784e-48 | -8.615850e-47 |
| Msa0970230 | Msa1087990 | 0.818324 | 2.079814e-52 | -8.615850e-47 |
| Msa0970230 | Msa1089320 | 0.809489 | 1.844735e-50 | -8.615850e-47 |
| Msa0970230 | Msa1089460 | 0.810918 | 9.075095e-51 | -8.615850e-47 |
| Msa0970230 | Msa1096070 | 0.821573 | 3.757109e-53 | -8.615850e-47 |
| Msa0970230 | Msa1107190 | 0.829149 | 6.049435e-55 | -8.615850e-47 |
| Msa0970230 | Msa1109090 | 0.824722 | 6.918159e-54 | -8.615850e-47 |
| Msa0970230 | Msa1115280 | 0.825257 | 5.173708e-54 | -8.615850e-47 |
| Msa0970230 | Msa1119090 | 0.816913 | 4.326571e-52 | -8.615850e-47 |
| Msa0970230 | Msa1119190 | 0.817491 | 3.208645e-52 | -8.615850e-47 |
| Msa0970230 | Msa1122860 | 0.803547 | 3.309332e-49 | -8.615850e-47 |
| Msa0970230 | Msa1127190 | 0.813563 | 2.403188e-51 | -8.615850e-47 |
| Msa0970230 | Msa1150790 | 0.858047 | 1.076696e-62 | -8.615850e-47 |
| Msa0970230 | Msa1150800 | 0.835078 | 2.069112e-56 | -8.615850e-47 |
| Msa0970230 | Msa1150810 | 0.858579 | 7.477187e-63 | -8.615850e-47 |
| Msa0970230 | Msa1157080 | 0.805336 | 1.402101e-49 | -8.615850e-47 |
| Msa0970230 | Msa1167260 | 0.806041 | 9.970591e-50 | -8.615850e-47 |
| Msa0970230 | Msa1173490 | 0.803676 | 3.110780e-49 | -8.615850e-47 |
| Msa0970230 | Msa1200250 | 0.837563 | 4.827085e-57 | -8.615850e-47 |
| Msa0970230 | Msa1206310 | 0.812505 | 4.099827e-51 | -8.615850e-47 |
| Msa0970230 | Msa1206360 | 0.822371 | 2.454858e-53 | -8.615850e-47 |
| Msa0970230 | Msa1207310 | 0.819888 | 9.168248e-53 | -8.615850e-47 |
| Msa0970230 | Msa1218580 | 0.826503 | 2.618148e-54 | -8.615850e-47 |
| Msa0970230 | Msa1224200 | 0.817143 | 3.841689e-52 | -8.615850e-47 |
| Msa0970230 | Msa1225100 | 0.814309 | 1.644961e-51 | -8.615850e-47 |
| Msa0970230 | Msa1231840 | 0.801309 | 9.569234e-49 | -8.615850e-47 |
| Msa0970230 | Msa1236420 | 0.803944 | 2.737309e-49 | -8.615850e-47 |
| Msa0970230 | Msa1246700 | 0.863564 | 2.274592e-64 | -8.615850e-47 |
| Msa0970230 | Msa1269660 | 0.803302 | 3.719380e-49 | -8.615850e-47 |
| Msa0970230 | Msa1270660 | 0.816116 | 6.527915e-52 | -8.615850e-47 |
| Msa0970230 | Msa1270730 | 0.800014 | 1.757884e-48 | -8.615850e-47 |
| Msa0970230 | Msa1276340 | 0.840466 | 8.547516e-58 | -8.615850e-47 |
| Msa0970230 | Msa1279480 | 0.841015 | 6.137113e-58 | -8.615850e-47 |
| Msa0970230 | Msa1291450 | 0.817012 | 4.110655e-52 | -8.615850e-47 |
| Msa0970230 | Msa1307180 | 0.808064 | 3.721159e-50 | -8.615850e-47 |
| Msa0970230 | Msa1316360 | 0.820932 | 5.282724e-53 | -8.615850e-47 |
| Msa0970230 | Msa1329870 | 0.815534 | 8.802672e-52 | -8.615850e-47 |
| Msa0970230 | Msa1338400 | 0.823806 | 1.136018e-53 | -8.615850e-47 |
| Msa0970230 | Msa1353890 | 0.806592 | 7.631162e-50 | -8.615850e-47 |
| Msa0970230 | Msa1355890 | 0.874143 | 8.501003e-68 | -8.615850e-47 |
| Msa0970230 | Msa1362020 | 0.803215 | 3.877593e-49 | -8.615850e-47 |
| Msa0970230 | Msa1364210 | 0.809367 | 1.959528e-50 | -8.615850e-47 |
| Msa0970230 | Msa1365270 | 0.849719 | 2.698918e-60 | -8.615850e-47 |
| Msa0970230 | Msa1365610 | 0.801805 | 7.570747e-49 | -8.615850e-47 |
| Msa0970230 | Msa1372280 | 0.810984 | 8.783519e-51 | -8.615850e-47 |
| Msa0970230 | Msa1376450 | 0.858534 | 7.715080e-63 | -8.615850e-47 |
| Msa0970230 | Msa1377080 | 0.806708 | 7.214023e-50 | -8.615850e-47 |
| Msa0970230 | Msa1378040 | 0.807743 | 4.354927e-50 | -8.615850e-47 |
| Msa0970230 | Msa1380220 | 0.848403 | 6.266465e-60 | -8.615850e-47 |
| Msa0970230 | Msa1380400 | 0.813644 | 2.305802e-51 | -8.615850e-47 |
| Msa0970230 | Msa1381960 | 0.809436 | 1.893845e-50 | -8.615850e-47 |
| Msa0970230 | Msa1382790 | 0.825522 | 4.476501e-54 | -8.615850e-47 |
| Msa0970230 | Msa1389880 | 0.813856 | 2.071339e-51 | -8.615850e-47 |
| Msa0970230 | Msa1391550 | 0.845300 | 4.426567e-59 | -8.615850e-47 |
| Msa0970230 | Msa1394380 | 0.821799 | 3.331164e-53 | -8.615850e-47 |
| Msa0970230 | Msa1405220 | 0.811187 | 7.937002e-51 | -8.615850e-47 |
| Msa0970230 | Msa1408340 | 0.804887 | 1.741191e-49 | -8.615850e-47 |
| Msa0970230 | Msa1418280 | 0.855866 | 4.732861e-62 | -8.615850e-47 |
| Msa0970230 | Msa1420270 | 0.823026 | 1.728361e-53 | -8.615850e-47 |
| Msa0970230 | Msa1422430 | 0.810865 | 9.317461e-51 | -8.615850e-47 |
| Msa0970230 | Msa1424630 | 0.802815 | 4.690983e-49 | -8.615850e-47 |
| Msa0970230 | Msa1427230 | 0.800409 | 1.460676e-48 | -8.615850e-47 |
| Msa0970230 | Msa1428780 | 0.803834 | 2.885064e-49 | -8.615850e-47 |
| Msa0970230 | Msa1430550 | 0.832143 | 1.118585e-55 | -8.615850e-47 |
| Msa0970230 | Msa1432130 | 0.803320 | 3.687035e-49 | -8.615850e-47 |
| Msa0970230 | Msa1436600 | 0.828279 | 9.822098e-55 | -8.615850e-47 |
| Msa0970230 | Msa1457160 | 0.822062 | 2.896344e-53 | -8.615850e-47 |
| Msa0970230 | Msa1458510 | 0.803614 | 3.205771e-49 | -8.615850e-47 |
| Msa0970230 | Msa1460800 | 0.829371 | 5.345408e-55 | -8.615850e-47 |
| Msa0970230 | Msa1462360 | 0.831478 | 1.631784e-55 | -8.615850e-47 |
| Msa0970230 | Msa1463600 | 0.807327 | 5.334920e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970230 | MtrunA17_Chr6g0470291 | 94.898 | 98 | 5 | 0 | 1 | 98 | 1 | 98 | 2.80e-56 | 169 |
| Msa0970230 | MtrunA17_Chr7g0251191 | 53.933 | 89 | 41 | 0 | 10 | 98 | 6 | 94 | 2.36e-35 | 115 |
| Msa0970230 | MtrunA17_Chr6g0483691 | 49.383 | 81 | 41 | 0 | 18 | 98 | 12 | 92 | 3.92e-29 | 100 |
| Msa0970230 | MtrunA17_Chr1g0209271 | 42.222 | 90 | 52 | 0 | 9 | 98 | 3 | 92 | 1.21e-26 | 94.0 |
| Msa0970230 | MtrunA17_Chr7g0251171 | 42.045 | 88 | 51 | 0 | 10 | 97 | 6 | 93 | 1.43e-22 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0970230 | AT3G18280.2 | 49.438 | 89 | 42 | 1 | 10 | 98 | 35 | 120 | 2.45e-30 | 104 |
| Msa0970230 | AT3G18280.1 | 49.438 | 89 | 42 | 1 | 10 | 98 | 11 | 96 | 4.20e-30 | 103 |
| Msa0970230 | AT1G48750.1 | 55.556 | 72 | 32 | 0 | 27 | 98 | 23 | 94 | 1.47e-28 | 99.4 |
| Msa0970230 | AT1G73780.1 | 34.694 | 98 | 64 | 0 | 1 | 98 | 1 | 98 | 2.78e-22 | 83.6 |
| Msa0970230 | AT1G66850.1 | 50.725 | 69 | 34 | 0 | 30 | 98 | 34 | 102 | 2.02e-21 | 81.3 |
| Msa0970230 | AT1G43666.1 | 46.154 | 91 | 43 | 3 | 8 | 98 | 11 | 95 | 3.82e-20 | 77.8 |
| Msa0970230 | AT5G38170.1 | 45.588 | 68 | 37 | 0 | 31 | 98 | 36 | 103 | 4.62e-19 | 75.5 |
| Msa0970230 | AT5G38195.1 | 47.761 | 67 | 35 | 0 | 32 | 98 | 29 | 95 | 9.17e-19 | 74.3 |
| Msa0970230 | AT1G43667.1 | 35.000 | 100 | 61 | 2 | 1 | 98 | 1 | 98 | 1.87e-18 | 73.6 |
| Msa0970230 | AT5G38160.1 | 40.260 | 77 | 42 | 1 | 22 | 98 | 31 | 103 | 9.75e-18 | 72.0 |
| Msa0970230 | AT5G38180.1 | 36.000 | 100 | 57 | 2 | 1 | 98 | 1 | 95 | 1.09e-17 | 71.6 |
| Msa0970230 | AT2G14846.1 | 45.161 | 62 | 34 | 0 | 37 | 98 | 38 | 99 | 1.31e-14 | 63.9 |
| Msa0970230 | AT1G43665.1 | 36.250 | 80 | 45 | 2 | 17 | 96 | 22 | 95 | 2.29e-14 | 63.9 |
| Msa0970230 | AT1G07747.1 | 40.909 | 66 | 37 | 1 | 33 | 98 | 29 | 92 | 2.30e-13 | 60.8 |
| Msa0970230 | AT5G38197.1 | 34.694 | 98 | 62 | 2 | 1 | 98 | 1 | 96 | 4.62e-13 | 60.1 |
| Msa0970230 | AT3G57310.1 | 36.364 | 66 | 42 | 0 | 33 | 98 | 38 | 103 | 1.05e-12 | 59.3 |
| Msa0970230 | AT4G12825.1 | 34.066 | 91 | 50 | 2 | 16 | 98 | 7 | 95 | 1.67e-12 | 58.5 |
Find 28 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGAGTTCAGTCCTTGTTT+AGG | 0.334416 | 6_4:-1671567 | Msa0970230:CDS |
| GTCTCTGCTCTCTTAACTTC+TGG | 0.337118 | 6_4:+1671505 | None:intergenic |
| TTTACTCTCCTGGTGCTAGA+AGG | 0.339135 | 6_4:-1671437 | Msa0970230:CDS |
| GAGCAGAGACCATGCCTTTG+TGG | 0.411218 | 6_4:-1671492 | Msa0970230:CDS |
| GAAGGGTTACTAGCTCTTGT+GGG | 0.413579 | 6_4:-1671419 | Msa0970230:CDS |
| TTCTGGCAACAAGCACTTGT+TGG | 0.433827 | 6_4:+1671522 | None:intergenic |
| ATGATTGATGGCTAACAAGT+TGG | 0.442427 | 6_4:+1671387 | None:intergenic |
| TAAATATACTGCTTGAGGCT+TGG | 0.456606 | 6_4:+1671456 | None:intergenic |
| AAACAAGGACTGAACTCTAC+AGG | 0.466330 | 6_4:+1671570 | None:intergenic |
| TGGCAACAAGCACTTGTTGG+TGG | 0.497936 | 6_4:+1671525 | None:intergenic |
| AGAAGGGTTACTAGCTCTTG+TGG | 0.498825 | 6_4:-1671420 | Msa0970230:CDS |
| TGATTGATGGCTAACAAGTT+GGG | 0.507677 | 6_4:+1671388 | None:intergenic |
| TGTTTATGCAGTAGTGGTTG+TGG | 0.508459 | 6_4:-1671646 | Msa0970230:CDS |
| AAGCAGTATATTTACTCTCC+TGG | 0.517554 | 6_4:-1671447 | Msa0970230:CDS |
| TGGTATTGTTTATGCAGTAG+TGG | 0.524181 | 6_4:-1671652 | Msa0970230:CDS |
| CTAGTAACCCTTCTAGCACC+AGG | 0.531212 | 6_4:+1671429 | None:intergenic |
| TTACTCTCCTGGTGCTAGAA+GGG | 0.532631 | 6_4:-1671436 | Msa0970230:CDS |
| GCTTGAGGCTTGGATTCTTG+AGG | 0.548134 | 6_4:+1671466 | None:intergenic |
| ATGAAGAAACACTCTAGCTA+TGG | 0.561126 | 6_4:-1671672 | Msa0970230:CDS |
| TGATGGCTAACAAGTTGGGA+AGG | 0.576643 | 6_4:+1671392 | None:intergenic |
| GAGAGTAAATATACTGCTTG+AGG | 0.582416 | 6_4:+1671451 | None:intergenic |
| AAGGGTTACTAGCTCTTGTG+GGG | 0.597115 | 6_4:-1671418 | Msa0970230:CDS |
| GGAGGAGACTTACATGGCAA+AGG | 0.624840 | 6_4:-1671607 | Msa0970230:CDS |
| AACAAGGACTGAACTCTACA+GGG | 0.629235 | 6_4:+1671571 | None:intergenic |
| GATGGCTAACAAGTTGGGAA+GGG | 0.649759 | 6_4:+1671393 | None:intergenic |
| TTGAGGTAACCACAAAGGCA+TGG | 0.650224 | 6_4:+1671483 | None:intergenic |
| GATTCTTGAGGTAACCACAA+AGG | 0.669776 | 6_4:+1671478 | None:intergenic |
| GTTGTGATTGATCCTAAACA+AGG | 0.684294 | 6_4:+1671555 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATGAAGAAACACTCTAGCTA+TGG | - | chr6_4:1671398-1671417 | Msa0970230:CDS | 35.0% | |
| TGGTATTGTTTATGCAGTAG+TGG | - | chr6_4:1671418-1671437 | Msa0970230:CDS | 35.0% | |
| ! | GTTGTGGCAATAGTGTTTTT+GGG | - | chr6_4:1671440-1671459 | Msa0970230:CDS | 35.0% |
| !! | TTGTGGCAATAGTGTTTTTG+GGG | - | chr6_4:1671441-1671460 | Msa0970230:CDS | 35.0% |
| GTTGTGATTGATCCTAAACA+AGG | + | chr6_4:1671518-1671537 | None:intergenic | 35.0% | |
| TAAATATACTGCTTGAGGCT+TGG | + | chr6_4:1671617-1671636 | None:intergenic | 35.0% | |
| GAGAGTAAATATACTGCTTG+AGG | + | chr6_4:1671622-1671641 | None:intergenic | 35.0% | |
| AAGCAGTATATTTACTCTCC+TGG | - | chr6_4:1671623-1671642 | Msa0970230:CDS | 35.0% | |
| TGTTTATGCAGTAGTGGTTG+TGG | - | chr6_4:1671424-1671443 | Msa0970230:CDS | 40.0% | |
| ! | GGTTGTGGCAATAGTGTTTT+TGG | - | chr6_4:1671439-1671458 | Msa0970230:CDS | 40.0% |
| !!! | TGTGGCAATAGTGTTTTTGG+GGG | - | chr6_4:1671442-1671461 | Msa0970230:CDS | 40.0% |
| AACAAGGACTGAACTCTACA+GGG | + | chr6_4:1671502-1671521 | None:intergenic | 40.0% | |
| AAACAAGGACTGAACTCTAC+AGG | + | chr6_4:1671503-1671522 | None:intergenic | 40.0% | |
| ! | GTAGAGTTCAGTCCTTGTTT+AGG | - | chr6_4:1671503-1671522 | Msa0970230:CDS | 40.0% |
| GATTCTTGAGGTAACCACAA+AGG | + | chr6_4:1671595-1671614 | None:intergenic | 40.0% | |
| TTCTGGCAACAAGCACTTGT+TGG | + | chr6_4:1671551-1671570 | None:intergenic | 45.0% | |
| GTCTCTGCTCTCTTAACTTC+TGG | + | chr6_4:1671568-1671587 | None:intergenic | 45.0% | |
| TTGAGGTAACCACAAAGGCA+TGG | + | chr6_4:1671590-1671609 | None:intergenic | 45.0% | |
| ! | TTTACTCTCCTGGTGCTAGA+AGG | - | chr6_4:1671633-1671652 | Msa0970230:CDS | 45.0% |
| ! | TTACTCTCCTGGTGCTAGAA+GGG | - | chr6_4:1671634-1671653 | Msa0970230:CDS | 45.0% |
| ! | AGAAGGGTTACTAGCTCTTG+TGG | - | chr6_4:1671650-1671669 | Msa0970230:CDS | 45.0% |
| ! | GAAGGGTTACTAGCTCTTGT+GGG | - | chr6_4:1671651-1671670 | Msa0970230:CDS | 45.0% |
| ! | AAGGGTTACTAGCTCTTGTG+GGG | - | chr6_4:1671652-1671671 | Msa0970230:CDS | 45.0% |
| !!! | GGCAATAGTGTTTTTGGGGG+AGG | - | chr6_4:1671445-1671464 | Msa0970230:CDS | 50.0% |
| TTTGGGGGAGGAGACTTACA+TGG | - | chr6_4:1671457-1671476 | Msa0970230:CDS | 50.0% | |
| GGAGGAGACTTACATGGCAA+AGG | - | chr6_4:1671463-1671482 | Msa0970230:CDS | 50.0% | |
| ! | TGGCAACAAGCACTTGTTGG+TGG | + | chr6_4:1671548-1671567 | None:intergenic | 50.0% |
| GCTTGAGGCTTGGATTCTTG+AGG | + | chr6_4:1671607-1671626 | None:intergenic | 50.0% | |
| CTAGTAACCCTTCTAGCACC+AGG | + | chr6_4:1671644-1671663 | None:intergenic | 50.0% | |
| GAGCAGAGACCATGCCTTTG+TGG | - | chr6_4:1671578-1671597 | Msa0970230:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 1671398 | 1671694 | 1671398 | ID=Msa0970230;Name=Msa0970230 |
| chr6_4 | mRNA | 1671398 | 1671694 | 1671398 | ID=Msa0970230-mRNA-1;Parent=Msa0970230;Name=Msa0970230-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|-1|0|1|-1|1|1|0|98 |
| chr6_4 | exon | 1671398 | 1671694 | 1671398 | ID=Msa0970230-mRNA-1:exon:844;Parent=Msa0970230-mRNA-1 |
| chr6_4 | CDS | 1671398 | 1671694 | 1671398 | ID=Msa0970230-mRNA-1:cds;Parent=Msa0970230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
