Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932100 | XP_013447476.1 | 94.898 | 98 | 5 | 0 | 1 | 98 | 1 | 98 | 3.05e-52 | 169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932100 | sp|P82353|NLTP2_PRUAR | 67.647 | 68 | 22 | 0 | 31 | 98 | 1 | 68 | 1.53e-29 | 103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015460 | Msa0932100 | 0.830289 | 3.193700e-55 | -8.615850e-47 |
| Msa0015480 | Msa0932100 | 0.825547 | 4.416427e-54 | -8.615850e-47 |
| Msa0017320 | Msa0932100 | 0.814285 | 1.665392e-51 | -8.615850e-47 |
| Msa0032080 | Msa0932100 | 0.811857 | 5.675108e-51 | -8.615850e-47 |
| Msa0037540 | Msa0932100 | -0.804841 | 1.779459e-49 | -8.615850e-47 |
| Msa0037590 | Msa0932100 | -0.802190 | 6.310162e-49 | -8.615850e-47 |
| Msa0051450 | Msa0932100 | 0.809123 | 2.210078e-50 | -8.615850e-47 |
| Msa0054260 | Msa0932100 | 0.839214 | 1.811838e-57 | -8.615850e-47 |
| Msa0054310 | Msa0932100 | 0.827054 | 1.933144e-54 | -8.615850e-47 |
| Msa0057890 | Msa0932100 | 0.815896 | 7.307797e-52 | -8.615850e-47 |
| Msa0061500 | Msa0932100 | 0.824044 | 9.986782e-54 | -8.615850e-47 |
| Msa0064700 | Msa0932100 | 0.805187 | 1.506670e-49 | -8.615850e-47 |
| Msa0065650 | Msa0932100 | 0.805487 | 1.303596e-49 | -8.615850e-47 |
| Msa0078830 | Msa0932100 | 0.843487 | 1.359994e-58 | -8.615850e-47 |
| Msa0081650 | Msa0932100 | 0.830592 | 2.692836e-55 | -8.615850e-47 |
| Msa0090570 | Msa0932100 | 0.802859 | 4.593178e-49 | -8.615850e-47 |
| Msa0092410 | Msa0932100 | 0.842432 | 2.596002e-58 | -8.615850e-47 |
| Msa0100080 | Msa0932100 | 0.821346 | 4.239631e-53 | -8.615850e-47 |
| Msa0100090 | Msa0932100 | 0.853001 | 3.187670e-61 | -8.615850e-47 |
| Msa0101830 | Msa0932100 | 0.811502 | 6.779666e-51 | -8.615850e-47 |
| Msa0109590 | Msa0932100 | 0.846917 | 1.606888e-59 | -8.615850e-47 |
| Msa0111080 | Msa0932100 | 0.800921 | 1.148612e-48 | -8.615850e-47 |
| Msa0118540 | Msa0932100 | 0.801881 | 7.303668e-49 | -8.615850e-47 |
| Msa0610130 | Msa0932100 | 0.812723 | 3.673016e-51 | -8.615850e-47 |
| Msa0610180 | Msa0932100 | 0.804822 | 1.796373e-49 | -8.615850e-47 |
| Msa0613340 | Msa0932100 | 0.809334 | 1.992268e-50 | -8.615850e-47 |
| Msa0614920 | Msa0932100 | 0.851248 | 1.004410e-60 | -8.615850e-47 |
| Msa0615220 | Msa0932100 | 0.813421 | 2.581853e-51 | -8.615850e-47 |
| Msa0620620 | Msa0932100 | 0.853112 | 2.962806e-61 | -8.615850e-47 |
| Msa0624960 | Msa0932100 | 0.803773 | 2.970406e-49 | -8.615850e-47 |
| Msa0626850 | Msa0932100 | 0.809743 | 1.627048e-50 | -8.615850e-47 |
| Msa0641320 | Msa0932100 | 0.804510 | 2.086730e-49 | -8.615850e-47 |
| Msa0648860 | Msa0932100 | 0.824207 | 9.148122e-54 | -8.615850e-47 |
| Msa0658990 | Msa0932100 | 0.804431 | 2.167075e-49 | -8.615850e-47 |
| Msa0664970 | Msa0932100 | 0.804396 | 2.204285e-49 | -8.615850e-47 |
| Msa0678090 | Msa0932100 | 0.809463 | 1.868949e-50 | -8.615850e-47 |
| Msa0679810 | Msa0932100 | 0.808591 | 2.873120e-50 | -8.615850e-47 |
| Msa0689780 | Msa0932100 | 0.823569 | 1.290936e-53 | -8.615850e-47 |
| Msa0696450 | Msa0932100 | 0.800278 | 1.553211e-48 | -8.615850e-47 |
| Msa0703910 | Msa0932100 | 0.805684 | 1.185044e-49 | -8.615850e-47 |
| Msa0708310 | Msa0932100 | 0.809520 | 1.816856e-50 | -8.615850e-47 |
| Msa0711150 | Msa0932100 | 0.868833 | 4.865930e-66 | -8.615850e-47 |
| Msa0715410 | Msa0932100 | 0.836056 | 1.170323e-56 | -8.615850e-47 |
| Msa0731180 | Msa0932100 | 0.811279 | 7.578191e-51 | -8.615850e-47 |
| Msa0738030 | Msa0932100 | 0.809864 | 1.532626e-50 | -8.615850e-47 |
| Msa0741070 | Msa0932100 | 0.802317 | 5.940908e-49 | -8.615850e-47 |
| Msa0742150 | Msa0932100 | 0.858332 | 8.858482e-63 | -8.615850e-47 |
| Msa0745070 | Msa0932100 | 0.813272 | 2.783837e-51 | -8.615850e-47 |
| Msa0750850 | Msa0932100 | 0.821654 | 3.598558e-53 | -8.615850e-47 |
| Msa0752070 | Msa0932100 | 0.823005 | 1.748054e-53 | -8.615850e-47 |
| Msa0771580 | Msa0932100 | 0.810035 | 1.408036e-50 | -8.615850e-47 |
| Msa0786070 | Msa0932100 | 0.835078 | 2.068434e-56 | -8.615850e-47 |
| Msa0805910 | Msa0932100 | 0.800498 | 1.401092e-48 | -8.615850e-47 |
| Msa0821190 | Msa0932100 | 0.806639 | 7.461040e-50 | -8.615850e-47 |
| Msa0823440 | Msa0932100 | 0.835256 | 1.865079e-56 | -8.615850e-47 |
| Msa0825870 | Msa0932100 | 0.830928 | 2.227820e-55 | -8.615850e-47 |
| Msa0826760 | Msa0932100 | 0.857895 | 1.194968e-62 | -8.615850e-47 |
| Msa0830230 | Msa0932100 | 0.873615 | 1.281461e-67 | -8.615850e-47 |
| Msa0127800 | Msa0932100 | 0.803577 | 3.262084e-49 | -8.615850e-47 |
| Msa0129190 | Msa0932100 | -0.805112 | 1.561863e-49 | -8.615850e-47 |
| Msa0130520 | Msa0932100 | 0.802030 | 6.807315e-49 | -8.615850e-47 |
| Msa0135410 | Msa0932100 | 0.830576 | 2.716832e-55 | -8.615850e-47 |
| Msa0138020 | Msa0932100 | 0.850087 | 2.129506e-60 | -8.615850e-47 |
| Msa0140100 | Msa0932100 | 0.833542 | 5.022502e-56 | -8.615850e-47 |
| Msa0141250 | Msa0932100 | 0.805590 | 1.240601e-49 | -8.615850e-47 |
| Msa0142280 | Msa0932100 | 0.803334 | 3.663495e-49 | -8.615850e-47 |
| Msa0143930 | Msa0932100 | 0.809556 | 1.784541e-50 | -8.615850e-47 |
| Msa0148720 | Msa0932100 | 0.803575 | 3.264780e-49 | -8.615850e-47 |
| Msa0152560 | Msa0932100 | 0.844329 | 8.090020e-59 | -8.615850e-47 |
| Msa0154920 | Msa0932100 | 0.801882 | 7.299296e-49 | -8.615850e-47 |
| Msa0155340 | Msa0932100 | 0.815973 | 7.025102e-52 | -8.615850e-47 |
| Msa0155880 | Msa0932100 | 0.808683 | 2.745157e-50 | -8.615850e-47 |
| Msa0160960 | Msa0932100 | 0.804251 | 2.363373e-49 | -8.615850e-47 |
| Msa0183850 | Msa0932100 | 0.803465 | 3.441731e-49 | -8.615850e-47 |
| Msa0186320 | Msa0932100 | 0.800210 | 1.603807e-48 | -8.615850e-47 |
| Msa0187020 | Msa0932100 | 0.810126 | 1.345554e-50 | -8.615850e-47 |
| Msa0187830 | Msa0932100 | 0.809328 | 1.997881e-50 | -8.615850e-47 |
| Msa0196670 | Msa0932100 | 0.805445 | 1.330166e-49 | -8.615850e-47 |
| Msa0197660 | Msa0932100 | 0.848431 | 6.155762e-60 | -8.615850e-47 |
| Msa0200850 | Msa0932100 | 0.860572 | 1.881477e-63 | -8.615850e-47 |
| Msa0201530 | Msa0932100 | 0.820585 | 6.345842e-53 | -8.615850e-47 |
| Msa0215590 | Msa0932100 | 0.852953 | 3.291168e-61 | -8.615850e-47 |
| Msa0217680 | Msa0932100 | 0.807206 | 5.661685e-50 | -8.615850e-47 |
| Msa0217700 | Msa0932100 | 0.853563 | 2.200618e-61 | -8.615850e-47 |
| Msa0225470 | Msa0932100 | 0.831116 | 2.003422e-55 | -8.615850e-47 |
| Msa0231060 | Msa0932100 | 0.832107 | 1.141629e-55 | -8.615850e-47 |
| Msa0233370 | Msa0932100 | 0.835097 | 2.046236e-56 | -8.615850e-47 |
| Msa0236070 | Msa0932100 | 0.817459 | 3.262388e-52 | -8.615850e-47 |
| Msa0369920 | Msa0932100 | 0.821189 | 4.609662e-53 | -8.615850e-47 |
| Msa0371950 | Msa0932100 | 0.823806 | 1.135630e-53 | -8.615850e-47 |
| Msa0383800 | Msa0932100 | 0.810693 | 1.015172e-50 | -8.615850e-47 |
| Msa0385490 | Msa0932100 | 0.809599 | 1.746952e-50 | -8.615850e-47 |
| Msa0387370 | Msa0932100 | 0.803805 | 2.925508e-49 | -8.615850e-47 |
| Msa0389210 | Msa0932100 | 0.809817 | 1.568461e-50 | -8.615850e-47 |
| Msa0391400 | Msa0932100 | 0.807365 | 5.238545e-50 | -8.615850e-47 |
| Msa0394470 | Msa0932100 | 0.820713 | 5.930518e-53 | -8.615850e-47 |
| Msa0403770 | Msa0932100 | 0.808587 | 2.877826e-50 | -8.615850e-47 |
| Msa0408300 | Msa0932100 | 0.819584 | 1.075398e-52 | -8.615850e-47 |
| Msa0410580 | Msa0932100 | 0.827415 | 1.584534e-54 | -8.615850e-47 |
| Msa0415420 | Msa0932100 | 0.837369 | 5.415212e-57 | -8.615850e-47 |
| Msa0417330 | Msa0932100 | 0.854925 | 8.893922e-62 | -8.615850e-47 |
| Msa0434180 | Msa0932100 | 0.813772 | 2.161497e-51 | -8.615850e-47 |
| Msa0438040 | Msa0932100 | 0.806607 | 7.578117e-50 | -8.615850e-47 |
| Msa0468320 | Msa0932100 | 0.820711 | 5.936298e-53 | -8.615850e-47 |
| Msa0471900 | Msa0932100 | 0.801143 | 1.034557e-48 | -8.615850e-47 |
| Msa0239800 | Msa0932100 | 0.855098 | 7.920578e-62 | -8.615850e-47 |
| Msa0241140 | Msa0932100 | 0.814461 | 1.522425e-51 | -8.615850e-47 |
| Msa0243480 | Msa0932100 | 0.878900 | 1.930976e-69 | -8.615850e-47 |
| Msa0244140 | Msa0932100 | 0.836054 | 1.171684e-56 | -8.615850e-47 |
| Msa0244190 | Msa0932100 | 0.834639 | 2.667669e-56 | -8.615850e-47 |
| Msa0255850 | Msa0932100 | 0.828558 | 8.409023e-55 | -8.615850e-47 |
| Msa0257500 | Msa0932100 | 0.831925 | 1.266122e-55 | -8.615850e-47 |
| Msa0257520 | Msa0932100 | 0.813526 | 2.447768e-51 | -8.615850e-47 |
| Msa0267790 | Msa0932100 | 0.811228 | 7.776841e-51 | -8.615850e-47 |
| Msa0269560 | Msa0932100 | 0.830989 | 2.152465e-55 | -8.615850e-47 |
| Msa0271550 | Msa0932100 | 0.803127 | 4.042376e-49 | -8.615850e-47 |
| Msa0277820 | Msa0932100 | 0.836297 | 1.016291e-56 | -8.615850e-47 |
| Msa0278580 | Msa0932100 | 0.818531 | 1.867044e-52 | -8.615850e-47 |
| Msa0281930 | Msa0932100 | 0.839923 | 1.185081e-57 | -8.615850e-47 |
| Msa0282680 | Msa0932100 | 0.802505 | 5.434560e-49 | -8.615850e-47 |
| Msa0284450 | Msa0932100 | 0.801786 | 7.639010e-49 | -8.615850e-47 |
| Msa0296820 | Msa0932100 | 0.818116 | 2.318254e-52 | -8.615850e-47 |
| Msa0299660 | Msa0932100 | 0.817635 | 2.977106e-52 | -8.615850e-47 |
| Msa0304100 | Msa0932100 | 0.801559 | 8.504616e-49 | -8.615850e-47 |
| Msa0310440 | Msa0932100 | 0.807246 | 5.550904e-50 | -8.615850e-47 |
| Msa0317510 | Msa0932100 | 0.846613 | 1.945295e-59 | -8.615850e-47 |
| Msa0319290 | Msa0932100 | 0.817009 | 4.117948e-52 | -8.615850e-47 |
| Msa0320430 | Msa0932100 | 0.844595 | 6.859019e-59 | -8.615850e-47 |
| Msa0321080 | Msa0932100 | 0.871811 | 5.142247e-67 | -8.615850e-47 |
| Msa0322680 | Msa0932100 | 0.805186 | 1.507102e-49 | -8.615850e-47 |
| Msa0333650 | Msa0932100 | 0.857549 | 1.513562e-62 | -8.615850e-47 |
| Msa0340690 | Msa0932100 | 0.825049 | 5.793153e-54 | -8.615850e-47 |
| Msa0340710 | Msa0932100 | 0.821919 | 3.125359e-53 | -8.615850e-47 |
| Msa0347750 | Msa0932100 | 0.817418 | 3.332093e-52 | -8.615850e-47 |
| Msa0357760 | Msa0932100 | 0.811515 | 6.737896e-51 | -8.615850e-47 |
| Msa0357790 | Msa0932100 | 0.820145 | 8.008016e-53 | -8.615850e-47 |
| Msa0357830 | Msa0932100 | 0.828438 | 8.989064e-55 | -8.615850e-47 |
| Msa0357840 | Msa0932100 | 0.826852 | 2.161304e-54 | -8.615850e-47 |
| Msa0357870 | Msa0932100 | 0.805718 | 1.165725e-49 | -8.615850e-47 |
| Msa0363790 | Msa0932100 | 0.803285 | 3.749880e-49 | -8.615850e-47 |
| Msa0485490 | Msa0932100 | 0.826776 | 2.252675e-54 | -8.615850e-47 |
| Msa0507610 | Msa0932100 | 0.805835 | 1.102041e-49 | -8.615850e-47 |
| Msa0518380 | Msa0932100 | 0.803946 | 2.734823e-49 | -8.615850e-47 |
| Msa0518440 | Msa0932100 | 0.806219 | 9.148945e-50 | -8.615850e-47 |
| Msa0530100 | Msa0932100 | 0.811415 | 7.080184e-51 | -8.615850e-47 |
| Msa0532980 | Msa0932100 | 0.805877 | 1.079655e-49 | -8.615850e-47 |
| Msa0534150 | Msa0932100 | 0.802983 | 4.331027e-49 | -8.615850e-47 |
| Msa0534870 | Msa0932100 | 0.806097 | 9.705856e-50 | -8.615850e-47 |
| Msa0541040 | Msa0932100 | 0.839831 | 1.252474e-57 | -8.615850e-47 |
| Msa0545290 | Msa0932100 | 0.809591 | 1.754261e-50 | -8.615850e-47 |
| Msa0587030 | Msa0932100 | 0.813679 | 2.265476e-51 | -8.615850e-47 |
| Msa0592180 | Msa0932100 | 0.815259 | 1.013267e-51 | -8.615850e-47 |
| Msa0597000 | Msa0932100 | 0.830377 | 3.039947e-55 | -8.615850e-47 |
| Msa0600890 | Msa0932100 | 0.808589 | 2.874909e-50 | -8.615850e-47 |
| Msa0861470 | Msa0932100 | 0.821944 | 3.083540e-53 | -8.615850e-47 |
| Msa0861570 | Msa0932100 | 0.818008 | 2.452627e-52 | -8.615850e-47 |
| Msa0862280 | Msa0932100 | 0.826187 | 3.112532e-54 | -8.615850e-47 |
| Msa0865330 | Msa0932100 | 0.823418 | 1.400137e-53 | -8.615850e-47 |
| Msa0876360 | Msa0932100 | 0.818807 | 1.616314e-52 | -8.615850e-47 |
| Msa0877710 | Msa0932100 | 0.800832 | 1.197628e-48 | -8.615850e-47 |
| Msa0880810 | Msa0932100 | 0.829486 | 5.011512e-55 | -8.615850e-47 |
| Msa0888260 | Msa0932100 | 0.820326 | 7.275461e-53 | -8.615850e-47 |
| Msa0894710 | Msa0932100 | 0.810268 | 1.254197e-50 | -8.615850e-47 |
| Msa0902830 | Msa0932100 | 0.812498 | 4.112406e-51 | -8.615850e-47 |
| Msa0932100 | Msa0932190 | 0.981969 | 6.699844e-154 | -8.615850e-47 |
| Msa0932100 | Msa0935770 | 0.825264 | 5.154858e-54 | -8.615850e-47 |
| Msa0932100 | Msa0943190 | 0.802020 | 6.837730e-49 | -8.615850e-47 |
| Msa0932100 | Msa0960390 | 0.803830 | 2.891249e-49 | -8.615850e-47 |
| Msa0932100 | Msa0960740 | 0.805329 | 1.407071e-49 | -8.615850e-47 |
| Msa0932100 | Msa0970230 | 0.997522 | 4.800095e-244 | -8.615850e-47 |
| Msa0932100 | Msa0972810 | 0.849050 | 4.146041e-60 | -8.615850e-47 |
| Msa0932100 | Msa0978700 | 0.816546 | 5.231740e-52 | -8.615850e-47 |
| Msa0932100 | Msa0980020 | 0.801282 | 9.689900e-49 | -8.615850e-47 |
| Msa0932100 | Msa0994370 | 0.806745 | 7.084807e-50 | -8.615850e-47 |
| Msa0932100 | Msa0994390 | 0.801012 | 1.100528e-48 | -8.615850e-47 |
| Msa0932100 | Msa1001080 | 0.806625 | 7.510804e-50 | -8.615850e-47 |
| Msa0932100 | Msa1013070 | 0.803889 | 2.809958e-49 | -8.615850e-47 |
| Msa0932100 | Msa1023300 | 0.839179 | 1.850104e-57 | -8.615850e-47 |
| Msa0932100 | Msa1025080 | 0.816624 | 5.025254e-52 | -8.615850e-47 |
| Msa0932100 | Msa1052330 | 0.802260 | 6.102823e-49 | -8.615850e-47 |
| Msa0932100 | Msa1062030 | 0.808151 | 3.565523e-50 | -8.615850e-47 |
| Msa0932100 | Msa1071320 | 0.818289 | 2.118655e-52 | -8.615850e-47 |
| Msa0932100 | Msa1076960 | 0.805349 | 1.393599e-49 | -8.615850e-47 |
| Msa0932100 | Msa1077340 | 0.815591 | 8.546540e-52 | -8.615850e-47 |
| Msa0932100 | Msa1087990 | 0.819342 | 1.221288e-52 | -8.615850e-47 |
| Msa0932100 | Msa1089320 | 0.811943 | 5.435332e-51 | -8.615850e-47 |
| Msa0932100 | Msa1089460 | 0.811635 | 6.344246e-51 | -8.615850e-47 |
| Msa0932100 | Msa1096070 | 0.821366 | 4.195598e-53 | -8.615850e-47 |
| Msa0932100 | Msa1107190 | 0.830529 | 2.790073e-55 | -8.615850e-47 |
| Msa0932100 | Msa1109090 | 0.823199 | 1.574728e-53 | -8.615850e-47 |
| Msa0932100 | Msa1115280 | 0.821934 | 3.100856e-53 | -8.615850e-47 |
| Msa0932100 | Msa1119090 | 0.813840 | 2.088101e-51 | -8.615850e-47 |
| Msa0932100 | Msa1119190 | 0.814608 | 1.413133e-51 | -8.615850e-47 |
| Msa0932100 | Msa1122860 | 0.800530 | 1.380356e-48 | -8.615850e-47 |
| Msa0932100 | Msa1127190 | 0.813171 | 2.929101e-51 | -8.615850e-47 |
| Msa0932100 | Msa1150790 | 0.858257 | 9.328139e-63 | -8.615850e-47 |
| Msa0932100 | Msa1150800 | 0.832414 | 9.585838e-56 | -8.615850e-47 |
| Msa0932100 | Msa1150810 | 0.858465 | 8.087624e-63 | -8.615850e-47 |
| Msa0932100 | Msa1157080 | 0.805753 | 1.146471e-49 | -8.615850e-47 |
| Msa0932100 | Msa1167260 | 0.803709 | 3.063050e-49 | -8.615850e-47 |
| Msa0932100 | Msa1173490 | 0.803810 | 2.918977e-49 | -8.615850e-47 |
| Msa0932100 | Msa1200250 | 0.833676 | 4.650538e-56 | -8.615850e-47 |
| Msa0932100 | Msa1204630 | 0.800837 | 1.194780e-48 | -8.615850e-47 |
| Msa0932100 | Msa1206310 | 0.814703 | 1.346085e-51 | -8.615850e-47 |
| Msa0932100 | Msa1206360 | 0.824384 | 8.309128e-54 | -8.615850e-47 |
| Msa0932100 | Msa1207310 | 0.822007 | 2.982181e-53 | -8.615850e-47 |
| Msa0932100 | Msa1218580 | 0.828124 | 1.070392e-54 | -8.615850e-47 |
| Msa0932100 | Msa1224200 | 0.816170 | 6.348337e-52 | -8.615850e-47 |
| Msa0932100 | Msa1225100 | 0.813404 | 2.604569e-51 | -8.615850e-47 |
| Msa0932100 | Msa1227810 | 0.802153 | 6.420982e-49 | -8.615850e-47 |
| Msa0932100 | Msa1231840 | 0.802853 | 4.607026e-49 | -8.615850e-47 |
| Msa0932100 | Msa1236420 | 0.804762 | 1.849042e-49 | -8.615850e-47 |
| Msa0932100 | Msa1246700 | 0.859901 | 3.001148e-63 | -8.615850e-47 |
| Msa0932100 | Msa1270660 | 0.816376 | 5.709593e-52 | -8.615850e-47 |
| Msa0932100 | Msa1270730 | 0.800345 | 1.505238e-48 | -8.615850e-47 |
| Msa0932100 | Msa1276340 | 0.836337 | 9.927452e-57 | -8.615850e-47 |
| Msa0932100 | Msa1279480 | 0.836760 | 7.746185e-57 | -8.615850e-47 |
| Msa0932100 | Msa1291450 | 0.813477 | 2.509435e-51 | -8.615850e-47 |
| Msa0932100 | Msa1307180 | 0.809132 | 2.201058e-50 | -8.615850e-47 |
| Msa0932100 | Msa1316360 | 0.821394 | 4.133962e-53 | -8.615850e-47 |
| Msa0932100 | Msa1329870 | 0.814595 | 1.422328e-51 | -8.615850e-47 |
| Msa0932100 | Msa1335230 | 0.800334 | 1.513042e-48 | -8.615850e-47 |
| Msa0932100 | Msa1338400 | 0.824691 | 7.035580e-54 | -8.615850e-47 |
| Msa0932100 | Msa1353890 | 0.806577 | 7.688157e-50 | -8.615850e-47 |
| Msa0932100 | Msa1355890 | 0.872088 | 4.160026e-67 | -8.615850e-47 |
| Msa0932100 | Msa1362020 | 0.802025 | 6.821607e-49 | -8.615850e-47 |
| Msa0932100 | Msa1364210 | 0.811833 | 5.743953e-51 | -8.615850e-47 |
| Msa0932100 | Msa1365270 | 0.848692 | 5.213460e-60 | -8.615850e-47 |
| Msa0932100 | Msa1372280 | 0.809689 | 1.670963e-50 | -8.615850e-47 |
| Msa0932100 | Msa1376450 | 0.856700 | 2.694816e-62 | -8.615850e-47 |
| Msa0932100 | Msa1377080 | 0.804690 | 1.913729e-49 | -8.615850e-47 |
| Msa0932100 | Msa1378040 | 0.809084 | 2.253072e-50 | -8.615850e-47 |
| Msa0932100 | Msa1380220 | 0.844719 | 6.352393e-59 | -8.615850e-47 |
| Msa0932100 | Msa1380400 | 0.811089 | 8.334940e-51 | -8.615850e-47 |
| Msa0932100 | Msa1381960 | 0.808019 | 3.803886e-50 | -8.615850e-47 |
| Msa0932100 | Msa1382790 | 0.828215 | 1.017482e-54 | -8.615850e-47 |
| Msa0932100 | Msa1389880 | 0.812297 | 4.551884e-51 | -8.615850e-47 |
| Msa0932100 | Msa1391550 | 0.842969 | 1.868635e-58 | -8.615850e-47 |
| Msa0932100 | Msa1394380 | 0.823428 | 1.392531e-53 | -8.615850e-47 |
| Msa0932100 | Msa1405220 | 0.810546 | 1.092621e-50 | -8.615850e-47 |
| Msa0932100 | Msa1407190 | 0.800015 | 1.757064e-48 | -8.615850e-47 |
| Msa0932100 | Msa1408340 | 0.806499 | 7.987576e-50 | -8.615850e-47 |
| Msa0932100 | Msa1418280 | 0.855461 | 6.211153e-62 | -8.615850e-47 |
| Msa0932100 | Msa1420270 | 0.823783 | 1.150189e-53 | -8.615850e-47 |
| Msa0932100 | Msa1422430 | 0.809475 | 1.858058e-50 | -8.615850e-47 |
| Msa0932100 | Msa1427230 | 0.801660 | 8.109501e-49 | -8.615850e-47 |
| Msa0932100 | Msa1428780 | 0.803431 | 3.496851e-49 | -8.615850e-47 |
| Msa0932100 | Msa1430550 | 0.831909 | 1.277564e-55 | -8.615850e-47 |
| Msa0932100 | Msa1432130 | 0.802902 | 4.500097e-49 | -8.615850e-47 |
| Msa0932100 | Msa1436600 | 0.829895 | 3.985672e-55 | -8.615850e-47 |
| Msa0932100 | Msa1457160 | 0.822883 | 1.866394e-53 | -8.615850e-47 |
| Msa0932100 | Msa1460800 | 0.828079 | 1.097083e-54 | -8.615850e-47 |
| Msa0932100 | Msa1462360 | 0.829756 | 4.306986e-55 | -8.615850e-47 |
| Msa0932100 | Msa1463600 | 0.803462 | 3.446535e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932100 | MtrunA17_Chr6g0470291 | 94.898 | 98 | 5 | 0 | 1 | 98 | 1 | 98 | 2.80e-56 | 169 |
| Msa0932100 | MtrunA17_Chr7g0251191 | 53.933 | 89 | 41 | 0 | 10 | 98 | 6 | 94 | 2.36e-35 | 115 |
| Msa0932100 | MtrunA17_Chr6g0483691 | 49.383 | 81 | 41 | 0 | 18 | 98 | 12 | 92 | 3.92e-29 | 100 |
| Msa0932100 | MtrunA17_Chr1g0209271 | 42.222 | 90 | 52 | 0 | 9 | 98 | 3 | 92 | 1.21e-26 | 94.0 |
| Msa0932100 | MtrunA17_Chr7g0251171 | 42.045 | 88 | 51 | 0 | 10 | 97 | 6 | 93 | 1.43e-22 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0932100 | AT3G18280.2 | 49.438 | 89 | 42 | 1 | 10 | 98 | 35 | 120 | 2.45e-30 | 104 |
| Msa0932100 | AT3G18280.1 | 49.438 | 89 | 42 | 1 | 10 | 98 | 11 | 96 | 4.20e-30 | 103 |
| Msa0932100 | AT1G48750.1 | 55.556 | 72 | 32 | 0 | 27 | 98 | 23 | 94 | 1.47e-28 | 99.4 |
| Msa0932100 | AT1G73780.1 | 34.694 | 98 | 64 | 0 | 1 | 98 | 1 | 98 | 2.78e-22 | 83.6 |
| Msa0932100 | AT1G66850.1 | 50.725 | 69 | 34 | 0 | 30 | 98 | 34 | 102 | 2.02e-21 | 81.3 |
| Msa0932100 | AT1G43666.1 | 46.154 | 91 | 43 | 3 | 8 | 98 | 11 | 95 | 3.82e-20 | 77.8 |
| Msa0932100 | AT5G38170.1 | 45.588 | 68 | 37 | 0 | 31 | 98 | 36 | 103 | 4.62e-19 | 75.5 |
| Msa0932100 | AT5G38195.1 | 47.761 | 67 | 35 | 0 | 32 | 98 | 29 | 95 | 9.17e-19 | 74.3 |
| Msa0932100 | AT1G43667.1 | 35.000 | 100 | 61 | 2 | 1 | 98 | 1 | 98 | 1.87e-18 | 73.6 |
| Msa0932100 | AT5G38160.1 | 40.260 | 77 | 42 | 1 | 22 | 98 | 31 | 103 | 9.75e-18 | 72.0 |
| Msa0932100 | AT5G38180.1 | 36.000 | 100 | 57 | 2 | 1 | 98 | 1 | 95 | 1.09e-17 | 71.6 |
| Msa0932100 | AT2G14846.1 | 45.161 | 62 | 34 | 0 | 37 | 98 | 38 | 99 | 1.31e-14 | 63.9 |
| Msa0932100 | AT1G43665.1 | 36.250 | 80 | 45 | 2 | 17 | 96 | 22 | 95 | 2.29e-14 | 63.9 |
| Msa0932100 | AT1G07747.1 | 40.909 | 66 | 37 | 1 | 33 | 98 | 29 | 92 | 2.30e-13 | 60.8 |
| Msa0932100 | AT5G38197.1 | 34.694 | 98 | 62 | 2 | 1 | 98 | 1 | 96 | 4.62e-13 | 60.1 |
| Msa0932100 | AT3G57310.1 | 36.364 | 66 | 42 | 0 | 33 | 98 | 38 | 103 | 1.05e-12 | 59.3 |
| Msa0932100 | AT4G12825.1 | 34.066 | 91 | 50 | 2 | 16 | 98 | 7 | 95 | 1.67e-12 | 58.5 |
Find 28 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGAGTTCAGTCCTTGTTT+AGG | 0.334416 | 6_3:-116864 | Msa0932100:CDS |
| GTCTCTGCTCTCTTAACTTC+TGG | 0.337118 | 6_3:+116802 | None:intergenic |
| TTTACTCTCCTGGTGCTAGA+AGG | 0.339135 | 6_3:-116734 | Msa0932100:CDS |
| GAGCAGAGACCATGCCTTTG+TGG | 0.411218 | 6_3:-116789 | Msa0932100:CDS |
| GAAGGGTTACTAGCTCTTGT+GGG | 0.413579 | 6_3:-116716 | Msa0932100:CDS |
| TTCTGGCAACAAGCACTTGT+TGG | 0.433827 | 6_3:+116819 | None:intergenic |
| ATGATTGATGGCTAACAAGT+TGG | 0.442427 | 6_3:+116684 | None:intergenic |
| TAAATATACTGCTTGAGGCT+TGG | 0.456606 | 6_3:+116753 | None:intergenic |
| AAACAAGGACTGAACTCTAC+AGG | 0.466330 | 6_3:+116867 | None:intergenic |
| TGGCAACAAGCACTTGTTGG+TGG | 0.497936 | 6_3:+116822 | None:intergenic |
| AGAAGGGTTACTAGCTCTTG+TGG | 0.498825 | 6_3:-116717 | Msa0932100:CDS |
| TGATTGATGGCTAACAAGTT+GGG | 0.507677 | 6_3:+116685 | None:intergenic |
| TGTTTATGCAGTAGTGGTTG+TGG | 0.508459 | 6_3:-116943 | Msa0932100:CDS |
| AAGCAGTATATTTACTCTCC+TGG | 0.517554 | 6_3:-116744 | Msa0932100:CDS |
| TGGTATTGTTTATGCAGTAG+TGG | 0.524181 | 6_3:-116949 | Msa0932100:CDS |
| CTAGTAACCCTTCTAGCACC+AGG | 0.531212 | 6_3:+116726 | None:intergenic |
| TTACTCTCCTGGTGCTAGAA+GGG | 0.532631 | 6_3:-116733 | Msa0932100:CDS |
| GCTTGAGGCTTGGATTCTTG+AGG | 0.548134 | 6_3:+116763 | None:intergenic |
| ATGAAGAAACACTCTAGCTA+TGG | 0.561126 | 6_3:-116969 | Msa0932100:CDS |
| TGATGGCTAACAAGTTGGGA+AGG | 0.576643 | 6_3:+116689 | None:intergenic |
| GAGAGTAAATATACTGCTTG+AGG | 0.582416 | 6_3:+116748 | None:intergenic |
| AAGGGTTACTAGCTCTTGTG+GGG | 0.597115 | 6_3:-116715 | Msa0932100:CDS |
| GGAGGAGACTTACATGGCAA+AGG | 0.624840 | 6_3:-116904 | Msa0932100:CDS |
| AACAAGGACTGAACTCTACA+GGG | 0.629235 | 6_3:+116868 | None:intergenic |
| GATGGCTAACAAGTTGGGAA+GGG | 0.649759 | 6_3:+116690 | None:intergenic |
| TTGAGGTAACCACAAAGGCA+TGG | 0.650224 | 6_3:+116780 | None:intergenic |
| GATTCTTGAGGTAACCACAA+AGG | 0.669776 | 6_3:+116775 | None:intergenic |
| GTTGTGATTGATCCTAAACA+AGG | 0.684294 | 6_3:+116852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATGAAGAAACACTCTAGCTA+TGG | - | chr6_3:116695-116714 | Msa0932100:CDS | 35.0% | |
| TGGTATTGTTTATGCAGTAG+TGG | - | chr6_3:116715-116734 | Msa0932100:CDS | 35.0% | |
| ! | GTTGTGGCAATAGTGTTTTT+GGG | - | chr6_3:116737-116756 | Msa0932100:CDS | 35.0% |
| !! | TTGTGGCAATAGTGTTTTTG+GGG | - | chr6_3:116738-116757 | Msa0932100:CDS | 35.0% |
| GTTGTGATTGATCCTAAACA+AGG | + | chr6_3:116815-116834 | None:intergenic | 35.0% | |
| TAAATATACTGCTTGAGGCT+TGG | + | chr6_3:116914-116933 | None:intergenic | 35.0% | |
| GAGAGTAAATATACTGCTTG+AGG | + | chr6_3:116919-116938 | None:intergenic | 35.0% | |
| AAGCAGTATATTTACTCTCC+TGG | - | chr6_3:116920-116939 | Msa0932100:CDS | 35.0% | |
| TGTTTATGCAGTAGTGGTTG+TGG | - | chr6_3:116721-116740 | Msa0932100:CDS | 40.0% | |
| ! | GGTTGTGGCAATAGTGTTTT+TGG | - | chr6_3:116736-116755 | Msa0932100:CDS | 40.0% |
| !!! | TGTGGCAATAGTGTTTTTGG+GGG | - | chr6_3:116739-116758 | Msa0932100:CDS | 40.0% |
| AACAAGGACTGAACTCTACA+GGG | + | chr6_3:116799-116818 | None:intergenic | 40.0% | |
| AAACAAGGACTGAACTCTAC+AGG | + | chr6_3:116800-116819 | None:intergenic | 40.0% | |
| ! | GTAGAGTTCAGTCCTTGTTT+AGG | - | chr6_3:116800-116819 | Msa0932100:CDS | 40.0% |
| GATTCTTGAGGTAACCACAA+AGG | + | chr6_3:116892-116911 | None:intergenic | 40.0% | |
| TTCTGGCAACAAGCACTTGT+TGG | + | chr6_3:116848-116867 | None:intergenic | 45.0% | |
| GTCTCTGCTCTCTTAACTTC+TGG | + | chr6_3:116865-116884 | None:intergenic | 45.0% | |
| TTGAGGTAACCACAAAGGCA+TGG | + | chr6_3:116887-116906 | None:intergenic | 45.0% | |
| ! | TTTACTCTCCTGGTGCTAGA+AGG | - | chr6_3:116930-116949 | Msa0932100:CDS | 45.0% |
| ! | TTACTCTCCTGGTGCTAGAA+GGG | - | chr6_3:116931-116950 | Msa0932100:CDS | 45.0% |
| ! | AGAAGGGTTACTAGCTCTTG+TGG | - | chr6_3:116947-116966 | Msa0932100:CDS | 45.0% |
| ! | GAAGGGTTACTAGCTCTTGT+GGG | - | chr6_3:116948-116967 | Msa0932100:CDS | 45.0% |
| ! | AAGGGTTACTAGCTCTTGTG+GGG | - | chr6_3:116949-116968 | Msa0932100:CDS | 45.0% |
| !!! | GGCAATAGTGTTTTTGGGGG+AGG | - | chr6_3:116742-116761 | Msa0932100:CDS | 50.0% |
| TTTGGGGGAGGAGACTTACA+TGG | - | chr6_3:116754-116773 | Msa0932100:CDS | 50.0% | |
| GGAGGAGACTTACATGGCAA+AGG | - | chr6_3:116760-116779 | Msa0932100:CDS | 50.0% | |
| ! | TGGCAACAAGCACTTGTTGG+TGG | + | chr6_3:116845-116864 | None:intergenic | 50.0% |
| GCTTGAGGCTTGGATTCTTG+AGG | + | chr6_3:116904-116923 | None:intergenic | 50.0% | |
| CTAGTAACCCTTCTAGCACC+AGG | + | chr6_3:116941-116960 | None:intergenic | 50.0% | |
| GAGCAGAGACCATGCCTTTG+TGG | - | chr6_3:116875-116894 | Msa0932100:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 116695 | 116991 | 116695 | ID=Msa0932100;Name=Msa0932100 |
| chr6_3 | mRNA | 116695 | 116991 | 116695 | ID=Msa0932100-mRNA-1;Parent=Msa0932100;Name=Msa0932100-mRNA-1;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|98 |
| chr6_3 | exon | 116695 | 116991 | 116695 | ID=Msa0932100-mRNA-1:exon:114;Parent=Msa0932100-mRNA-1 |
| chr6_3 | CDS | 116695 | 116991 | 116695 | ID=Msa0932100-mRNA-1:cds;Parent=Msa0932100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
