AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0340690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340690 MtrunA17_Chr2g0323381 96.618 414 13 1 1 413 1 414 0.0 807
Msa0340690 MtrunA17_Chr4g0022871 81.687 415 73 2 1 413 1 414 0.0 688
Msa0340690 MtrunA17_Chr4g0022861 75.879 398 95 1 17 413 1 398 0.0 624
Msa0340690 MtrunA17_Chr2g0280991 68.873 408 124 3 7 411 14 421 0.0 566
Msa0340690 MtrunA17_Chr2g0280971 68.059 407 128 2 7 411 35 441 0.0 561
Msa0340690 MtrunA17_Chr4g0022801 72.222 396 81 1 47 413 10 405 0.0 556
Msa0340690 MtrunA17_Chr8g0335821 60.606 363 140 2 52 411 2 364 8.59e-143 411
Msa0340690 MtrunA17_Chr1g0184961 70.079 254 63 3 47 292 104 352 7.12e-118 347
Msa0340690 MtrunA17_Chr4g0020331 32.178 404 234 12 21 409 37 415 3.07e-50 174
Msa0340690 MtrunA17_Chr2g0280961 65.873 126 42 1 243 367 106 231 3.13e-49 166
Msa0340690 MtrunA17_Chr2g0280961 56.180 89 39 0 52 140 2 90 3.36e-26 105
Msa0340690 MtrunA17_Chr3g0103741 30.424 401 251 8 18 409 42 423 5.48e-42 153
Msa0340690 MtrunA17_Chr4g0063911 28.706 425 255 12 1 409 6 398 6.72e-39 144
Msa0340690 MtrunA17_Chr1g0184971 74.603 63 16 0 295 357 2 64 1.08e-27 105
Msa0340690 MtrunA17_Chr4g0022811 76.190 42 10 0 5 46 3 44 1.75e-15 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0340690 AT4G05120.1 70.416 409 117 3 5 411 8 414 0.0 596
Msa0340690 AT4G05120.2 70.416 409 117 3 5 411 8 414 0.0 596
Msa0340690 AT4G05110.3 67.482 409 129 3 5 411 8 414 0.0 567
Msa0340690 AT4G05110.1 67.482 409 129 3 5 411 8 414 0.0 567
Msa0340690 AT4G05110.2 67.237 409 130 3 5 411 8 414 0.0 566
Msa0340690 AT4G05140.1 65.931 408 138 1 5 411 8 415 0.0 559
Msa0340690 AT4G05130.1 64.563 412 140 4 5 413 8 416 0.0 545
Msa0340690 AT3G09990.1 63.235 408 148 2 8 413 10 417 0.0 525
Msa0340690 AT1G61630.1 61.244 418 151 4 1 411 1 414 2.85e-177 501
Msa0340690 AT1G70330.1 31.477 413 238 9 16 409 64 450 3.21e-47 168
Msa0340690 AT1G02630.1 29.056 413 252 10 5 409 10 389 1.12e-45 162
Msa0340690 AT1G02630.2 27.751 209 147 4 5 211 10 216 2.95e-21 94.7

Find 114 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTTGAAATTCTTGAAAT+TGG 0.116609 2_4:-62053697 Msa0340690:CDS
GTGCATTAACCTCTGCTTTA+AGG 0.117350 2_4:-62054619 Msa0340690:CDS
TTTCTCCATGGTAGATTTAT+AGG 0.187275 2_4:-62052968 Msa0340690:three_prime_UTR
GACTCTTCCCTCTTCCTTCT+TGG 0.207482 2_4:-62057259 Msa0340690:five_prime_UTR
TTACTACATTTACTTGTTTC+CGG 0.228601 2_4:-62056199 Msa0340690:intron
GAAAGAAATAGTACTTCTTT+AGG 0.270591 2_4:+62054196 None:intergenic
AGAGATATGATATGGTTAAA+TGG 0.271531 2_4:-62053069 Msa0340690:three_prime_UTR
ATTTCTATGTAATTTCAAAA+TGG 0.282630 2_4:-62052834 Msa0340690:three_prime_UTR
AGCAGCATTTGATAATTCTA+AGG 0.310431 2_4:-62054585 Msa0340690:CDS
GGGAAAATATGCTGCAATAT+TGG 0.315284 2_4:-62056283 Msa0340690:CDS
GATAATGTTGACATCATTCT+TGG 0.317000 2_4:-62053580 Msa0340690:CDS
ATCTGCACCCAAAGGTTATA+AGG 0.323238 2_4:-62053520 Msa0340690:intron
GTACTTCTTTAGGTATTGTT+TGG 0.329362 2_4:+62054206 None:intergenic
GGTTAAATGGCACAACAAAA+AGG 0.338949 2_4:-62053056 Msa0340690:three_prime_UTR
TAATTTCAAAATGGCTGTAT+TGG 0.343524 2_4:-62052825 Msa0340690:three_prime_UTR
CAAAAGTCAATACTAGATTA+AGG 0.350479 2_4:-62055418 Msa0340690:CDS
AGGTCTTACCTTATAACCTT+TGG 0.354635 2_4:+62053512 None:intergenic
GGTCTTACCTTATAACCTTT+GGG 0.357526 2_4:+62053513 None:intergenic
ATATTGGTATGCTTCCTTCT+TGG 0.358786 2_4:-62056267 Msa0340690:CDS
ACACAAAATGCATTGAAGTA+TGG 0.361696 2_4:-62052870 Msa0340690:three_prime_UTR
CTAGACTGGTTGTGGTTGAT+AGG 0.364036 2_4:-62053197 Msa0340690:CDS
ATAGTGTCAATGCATAAATT+AGG 0.364083 2_4:+62054010 None:intergenic
AAGCTCAAAGAATGTTGATA+TGG 0.364975 2_4:+62054348 None:intergenic
TACAATGTGTGGGATCTAAT+AGG 0.376699 2_4:-62053732 Msa0340690:CDS
TAGCTGACCTGAATGAATTC+TGG 0.378851 2_4:+62055129 None:intergenic
GATACCGGAGCACATAGTTT+AGG 0.399627 2_4:-62053961 Msa0340690:CDS
AAGATCAGCTGAAACCGTTT+TGG 0.400371 2_4:+62054243 None:intergenic
GTACGGTAGTATTTCACAAT+TGG 0.413573 2_4:+62054286 None:intergenic
ATAATGTTGACATCATTCTT+GGG 0.414131 2_4:-62053579 Msa0340690:CDS
GGGTCCAGAACAAAATGCTT+TGG 0.429540 2_4:-62053270 Msa0340690:CDS
GTATGCTTCCTTCTTGGCAA+TGG 0.430207 2_4:-62056261 Msa0340690:CDS
TGGCAATTTAGAACTATAAT+CGG 0.430625 2_4:+62055104 None:intergenic
CATGTTCAAGGTGGAATGAT+TGG 0.433600 2_4:-62055171 Msa0340690:CDS
CATGAAGCCAGAATTCATTC+AGG 0.440760 2_4:-62055136 Msa0340690:CDS
GGTCCAGAACAAAATGCTTT+GGG 0.444913 2_4:-62053269 Msa0340690:CDS
ACTAGATTAAGGAACCTGTT+TGG 0.445916 2_4:-62055407 Msa0340690:CDS
TAGTTGGATTTAGCAACATC+TGG 0.446987 2_4:-62055261 Msa0340690:CDS
TTGGTGTTGTTTCTACTTGG+AGG 0.450252 2_4:-62053239 Msa0340690:CDS
TGCTATATTGTCTTATAATG+AGG 0.452571 2_4:-62055441 Msa0340690:CDS
GTATCTTCAGACAGAAATCC+AGG 0.455042 2_4:+62053979 None:intergenic
TTGTTGGTGTTGTTTCTACT+TGG 0.466918 2_4:-62053242 Msa0340690:CDS
AAATGCTTTGGGAAACTTGT+TGG 0.472777 2_4:-62053258 Msa0340690:CDS
TCTAAGGATGGTCTTAGAAA+AGG 0.472918 2_4:-62054569 Msa0340690:CDS
TGTGCAATTAGTGGTGCCTT+TGG 0.477018 2_4:-62055207 Msa0340690:CDS
TGCAGAATTATCATCCCTCC+AGG 0.479683 2_4:-62055505 Msa0340690:intron
GCAAGTGTTCCAACTGCAAA+TGG 0.482568 2_4:+62055461 None:intergenic
GGGTTACACTAGACTGGTTG+TGG 0.484518 2_4:-62053205 Msa0340690:CDS
ACTGCAAAGTATGGTGATCA+AGG 0.485522 2_4:-62053609 Msa0340690:CDS
ATTGGTATATGTGCAATTAG+TGG 0.486598 2_4:-62055216 Msa0340690:CDS
TCTGCGCTTTAGTGGTTCAT+CGG 0.494479 2_4:-62052786 Msa0340690:three_prime_UTR
TCAGCTGATCTTGCAGCTGG+TGG 0.503591 2_4:-62054232 Msa0340690:CDS
AAAGACATCCATTGCCAAGA+AGG 0.509411 2_4:+62056253 None:intergenic
TCTCAATAAGCACAAACTAC+AGG 0.510107 2_4:-62053159 Msa0340690:three_prime_UTR
GTTTCAGCTGATCTTGCAGC+TGG 0.510600 2_4:-62054235 Msa0340690:CDS
GTGTTCCAACTGCAAATGGC+TGG 0.520973 2_4:+62055465 None:intergenic
TGTAATTAACCTTAAAGCAG+AGG 0.522589 2_4:+62054610 None:intergenic
TTGCAGGGGTTACACTAGAC+TGG 0.523837 2_4:-62053211 Msa0340690:CDS
GTGTTTAGATTAATATTCAA+AGG 0.528049 2_4:-62052729 Msa0340690:three_prime_UTR
ATTTCAAGAATTTCAAGAGT+GGG 0.530371 2_4:+62053700 None:intergenic
GATTTAGCAACATCTGGTAA+AGG 0.531613 2_4:-62055255 Msa0340690:CDS
CAAACATGAACACGCCAAGA+AGG 0.542626 2_4:+62057245 None:intergenic
ACATCTGGTAAAGGAGGACT+TGG 0.542893 2_4:-62055246 Msa0340690:CDS
ACAAACAGTGAGGTAACCAT+TGG 0.544603 2_4:+62053551 None:intergenic
TTTGCAGTGAAATAAAATGC+TGG 0.546823 2_4:+62053624 None:intergenic
TGTCTTTCTCAGCACTTCTG+TGG 0.546855 2_4:-62057224 Msa0340690:five_prime_UTR
GCATAAACCTCTAGACGTGT+TGG 0.547583 2_4:+62056397 None:intergenic
GGATTTCTGTCTGAAGATAC+CGG 0.548527 2_4:-62053976 Msa0340690:CDS
GTATAATAGAGATTAGTTCA+AGG 0.548918 2_4:+62057199 None:intergenic
GTTGCAGATGCTCATGTTCA+AGG 0.549362 2_4:-62055183 Msa0340690:CDS
TGTGGTTGATAGGCAAAGGT+TGG 0.549746 2_4:-62053187 Msa0340690:CDS
CAAAGTATGGTGATCAAGGT+TGG 0.550801 2_4:-62053605 Msa0340690:CDS
GCATTTGATAATTCTAAGGA+TGG 0.554074 2_4:-62054581 Msa0340690:CDS
TCATTCTTGGGGCTATCCAA+TGG 0.554884 2_4:-62053567 Msa0340690:CDS
TGCACACAAACAAGAGAGGA+AGG 0.556796 2_4:-62054082 Msa0340690:CDS
TACAGGAATAGTTGTGATTG+AGG 0.557006 2_4:-62053142 Msa0340690:three_prime_UTR
TGAACACGCCAAGAAGGAAG+AGG 0.564741 2_4:+62057251 None:intergenic
ACAAGAGAGGAAGGGAAACA+AGG 0.569413 2_4:-62054073 Msa0340690:CDS
TGTTCCTAAACTATGTGCTC+CGG 0.571762 2_4:+62053957 None:intergenic
GTATACCAGCCATTTGCAGT+TGG 0.574201 2_4:-62055470 Msa0340690:CDS
TAAACCTCTAGACGTGTTGG+AGG 0.581439 2_4:+62056400 None:intergenic
AGCATCAGAAGGATCCAAAA+CGG 0.581586 2_4:-62054257 Msa0340690:CDS
ATGTGTCATTTACACAAGGA+AGG 0.585751 2_4:-62053030 Msa0340690:three_prime_UTR
TGTGTCATTTACACAAGGAA+GGG 0.590923 2_4:-62053029 Msa0340690:three_prime_UTR
GTGTCATTTACACAAGGAAG+GGG 0.591185 2_4:-62053028 Msa0340690:three_prime_UTR
CTCCATGGTAGATTTATAGG+AGG 0.592906 2_4:-62052965 Msa0340690:three_prime_UTR
TAAAAGGGTCTGTTTCTCCA+TGG 0.596121 2_4:-62052980 Msa0340690:three_prime_UTR
TTTATTATTACGCTTGGACA+TGG 0.598221 2_4:+62052931 None:intergenic
TAATGTTGACATCATTCTTG+GGG 0.600627 2_4:-62053578 Msa0340690:CDS
AATGAATTCTGGCTTCATGT+AGG 0.600985 2_4:+62055140 None:intergenic
TGAGCCTCCAACACGTCTAG+AGG 0.604316 2_4:-62056404 Msa0340690:intron
AATTTCAAGAATTTCAAGAG+TGG 0.605836 2_4:+62053699 None:intergenic
GAACACGCCAAGAAGGAAGA+GGG 0.611432 2_4:+62057252 None:intergenic
TTAGCAACATCTGGTAAAGG+AGG 0.617570 2_4:-62055252 Msa0340690:CDS
TAATTGCAATGTACAATGTG+TGG 0.621011 2_4:-62053743 Msa0340690:CDS
CGTACAAAAGCAGCATCAGA+AGG 0.622959 2_4:-62054268 Msa0340690:CDS
ATGAGCATCTGCAACTCCAA+AGG 0.623544 2_4:+62055191 None:intergenic
AATTGCAATGTACAATGTGT+GGG 0.632930 2_4:-62053742 Msa0340690:CDS
GTTATGACATCTGCACCCAA+AGG 0.634499 2_4:-62053528 Msa0340690:CDS
AATAATTCAAGGCAGAGCCA+TGG 0.635029 2_4:-62056434 Msa0340690:exon
TACCTCCTATAAATCTACCA+TGG 0.635378 2_4:+62052963 None:intergenic
TGGAGGCTCAACGTTGACCA+TGG 0.638186 2_4:+62056417 None:intergenic
AAATGCATTGAAGTATGGTG+AGG 0.655656 2_4:-62052865 Msa0340690:three_prime_UTR
ACAAGTGTAAGCACCCTGGA+GGG 0.662948 2_4:+62055491 None:intergenic
GTATACAAGTGTAAGCACCC+TGG 0.665189 2_4:+62055487 None:intergenic
TGGTTGTGGTTGATAGGCAA+AGG 0.669026 2_4:-62053191 Msa0340690:CDS
GCACACAAACAAGAGAGGAA+GGG 0.670991 2_4:-62054081 Msa0340690:CDS
ATCATGCACACAAACAAGAG+AGG 0.673529 2_4:-62054086 Msa0340690:CDS
GAGCACATAGTTTAGGAACA+TGG 0.674637 2_4:-62053954 Msa0340690:intron
TACAAGTGTAAGCACCCTGG+AGG 0.676424 2_4:+62055490 None:intergenic
TATCTTCAGACAGAAATCCA+GGG 0.678514 2_4:+62053980 None:intergenic
GTGTATGTGTCATTTACACA+AGG 0.691380 2_4:-62053034 Msa0340690:three_prime_UTR
GCAGAATTATCATCCCTCCA+GGG 0.701785 2_4:-62055504 Msa0340690:intron
GCAGATGCTCATGTTCAAGG+TGG 0.722859 2_4:-62055180 Msa0340690:CDS
ATGTCATAACACAAACAGTG+AGG 0.743595 2_4:+62053541 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATATATATTTTTTT+TGG + chr2_4:62053465-62053484 None:intergenic 0.0%
!!! ATTAAAATTATTAGCTTTTT+AGG + chr2_4:62055167-62055186 None:intergenic 10.0%
!!! TTTATGTTTTAATTTATTGT+AGG - chr2_4:62056762-62056781 Msa0340690:intron 10.0%
!!! TTATGTTTTAATTTATTGTA+GGG - chr2_4:62056763-62056782 Msa0340690:intron 10.0%
!!! CAATTTTTTTAACAAATAAA+AGG - chr2_4:62057057-62057076 Msa0340690:intron 10.0%
!! ATAACAATTAAATTACGTAA+AGG + chr2_4:62052926-62052945 None:intergenic 15.0%
!! TAATAGAAATTAAAACTTCT+GGG + chr2_4:62053075-62053094 None:intergenic 15.0%
!! TTAATAGAAATTAAAACTTC+TGG + chr2_4:62053076-62053095 None:intergenic 15.0%
!!! GAAGTTTTAATTTCTATTAA+TGG - chr2_4:62053076-62053095 Msa0340690:three_prime_UTR 15.0%
!! TATATGATATCAAAAAATTG+TGG + chr2_4:62053221-62053240 None:intergenic 15.0%
!! TACTTATAAATCAACAAAAA+TGG + chr2_4:62053270-62053289 None:intergenic 15.0%
!! TACATGCATTTATAATAATT+TGG + chr2_4:62053382-62053401 None:intergenic 15.0%
!!! ATATATATTTCTAGTTATGT+TGG - chr2_4:62053515-62053534 Msa0340690:intron 15.0%
!!! TTCATTTTTTTTCTTGTTAT+TGG - chr2_4:62053739-62053758 Msa0340690:CDS 15.0%
!! AATTTATAATTAAGATTGAG+AGG - chr2_4:62053982-62054001 Msa0340690:CDS 15.0%
!! TATAAATATAAAACTGCATT+GGG + chr2_4:62054166-62054185 None:intergenic 15.0%
!! ATATAAATATAAAACTGCAT+TGG + chr2_4:62054167-62054186 None:intergenic 15.0%
!!! GCTAATAATTTTAATTTCTA+TGG - chr2_4:62055172-62055191 Msa0340690:CDS 15.0%
!!! AATAATTTTAATTTCTATGG+TGG - chr2_4:62055175-62055194 Msa0340690:CDS 15.0%
!! AAAATTACCAAAGATTTAAA+AGG + chr2_4:62056143-62056162 None:intergenic 15.0%
!! TATTATAGTAGTGTTTAATT+TGG - chr2_4:62056572-62056591 Msa0340690:intron 15.0%
!! CATAAATATTAATGTGAATT+TGG + chr2_4:62056748-62056767 None:intergenic 15.0%
!! TAAAAACGAAAAATAGAAAT+TGG - chr2_4:62056943-62056962 Msa0340690:intron 15.0%
!!! TTTTTTTTTATTATTACGCT+TGG + chr2_4:62057131-62057150 None:intergenic 15.0%
!! AAGCGTAATAATAAAAAAAA+AGG - chr2_4:62057130-62057149 Msa0340690:intron 15.0%
!! ATTTCTATGTAATTTCAAAA+TGG - chr2_4:62057219-62057238 Msa0340690:five_prime_UTR 15.0%
!! GATAACTAGAAATATATAAC+TGG + chr2_4:62053443-62053462 None:intergenic 20.0%
!! AAGTATATAACCTCAATTTA+AGG + chr2_4:62053574-62053593 None:intergenic 20.0%
!! GATTGAAAAAGAATAATTCA+AGG - chr2_4:62053608-62053627 Msa0340690:CDS 20.0%
!!! TACTTTTATTTGCTTAAGAA+TGG - chr2_4:62053696-62053715 Msa0340690:CDS 20.0%
!!! AATTGCACAAATCTATTTTT+TGG - chr2_4:62053935-62053954 Msa0340690:intron 20.0%
!! AAAACGTAAAACAAATTGTA+GGG - chr2_4:62054124-62054143 Msa0340690:intron 20.0%
!! ATAAATATAAAACTGCATTG+GGG + chr2_4:62054165-62054184 None:intergenic 20.0%
!!! TTTATAATCTGGAATTCAAT+CGG + chr2_4:62054383-62054402 None:intergenic 20.0%
!!! TTTTTTCATAACCACTTTTT+TGG - chr2_4:62054678-62054697 Msa0340690:intron 20.0%
!! ACAATTAGTTGAATAGATAA+AGG + chr2_4:62054718-62054737 None:intergenic 20.0%
!! TCCAATAAATTTAATGTAGT+TGG - chr2_4:62054776-62054795 Msa0340690:intron 20.0%
!! TCCAACTACATTAAATTTAT+TGG + chr2_4:62054780-62054799 None:intergenic 20.0%
!! ATCAAACATAAACGAAATTA+TGG + chr2_4:62055050-62055069 None:intergenic 20.0%
!! TTTATGTTTGATTCTATCTT+TGG - chr2_4:62055058-62055077 Msa0340690:intron 20.0%
!! AAACCAAACATAACAATTTA+TGG + chr2_4:62055105-62055124 None:intergenic 20.0%
!!! GATTTTTATCGATTTATGTT+AGG + chr2_4:62055256-62055275 None:intergenic 20.0%
!!! ATTTTACGTTCAATTAATTC+AGG - chr2_4:62055307-62055326 Msa0340690:intron 20.0%
!! CTAAATAGTATATAGAGTAA+TGG + chr2_4:62055644-62055663 None:intergenic 20.0%
!!! TATTTCACAATTGGTATTTT+AGG + chr2_4:62055761-62055780 None:intergenic 20.0%
!!! ATAATAATTTCCCTTTTTTC+AGG - chr2_4:62055938-62055957 Msa0340690:intron 20.0%
!!! AGTTGTGCTTATAATTTTTT+AGG - chr2_4:62056274-62056293 Msa0340690:CDS 20.0%
!!! TATTTATGCTTTAAGGATAT+TGG + chr2_4:62056701-62056720 None:intergenic 20.0%
!! TTTGGATTTCATATAGTATA+GGG + chr2_4:62056730-62056749 None:intergenic 20.0%
!! ATTTGGATTTCATATAGTAT+AGG + chr2_4:62056731-62056750 None:intergenic 20.0%
!!! CTATTTTTAGAGATATGATA+TGG - chr2_4:62056976-62056995 Msa0340690:intron 20.0%
!! GTATAATAGAGATTAGTTCA+AGG + chr2_4:62052857-62052876 None:intergenic 25.0%
! AAGATAATTAGAGAAGAAGA+GGG + chr2_4:62052900-62052919 None:intergenic 25.0%
! AAAGATAATTAGAGAAGAAG+AGG + chr2_4:62052901-62052920 None:intergenic 25.0%
! CGTAATTTAATTGTTATGCT+TGG - chr2_4:62052929-62052948 Msa0340690:three_prime_UTR 25.0%
! CTTGGTATCTTTATTCATTT+AGG - chr2_4:62052947-62052966 Msa0340690:three_prime_UTR 25.0%
! CATAAAAGGAAGAAAGATAT+TGG - chr2_4:62052992-62053011 Msa0340690:three_prime_UTR 25.0%
! ACTTTGATTCAAAATCTTGA+TGG + chr2_4:62053184-62053203 None:intergenic 25.0%
! AACTGTGTACGTAAATTTAA+TGG - chr2_4:62053417-62053436 Msa0340690:intron 25.0%
! ATATACTTTCTTGTAGAACT+TGG - chr2_4:62053586-62053605 Msa0340690:CDS 25.0%
! TATTTGCTTAAGAATGGAAA+TGG - chr2_4:62053702-62053721 Msa0340690:CDS 25.0%
!!! TTCTTGTTATTGGTATTCAT+AGG - chr2_4:62053749-62053768 Msa0340690:CDS 25.0%
!!! TCTTGTTATTGGTATTCATA+GGG - chr2_4:62053750-62053769 Msa0340690:CDS 25.0%
! TTACTACATTTACTTGTTTC+CGG - chr2_4:62053854-62053873 Msa0340690:intron 25.0%
! AAAGTACACAAATTACATAC+CGG + chr2_4:62053876-62053895 None:intergenic 25.0%
!!! CTACAATTTGTTTTACGTTT+TGG + chr2_4:62054125-62054144 None:intergenic 25.0%
! CAAAACGTAAAACAAATTGT+AGG - chr2_4:62054123-62054142 Msa0340690:intron 25.0%
!! TTATAATCTGGAATTCAATC+GGG + chr2_4:62054382-62054401 None:intergenic 25.0%
!! GAAAAGAGGTTTTTATAATC+TGG + chr2_4:62054394-62054413 None:intergenic 25.0%
! TTAAATTACACCAACATACA+AGG + chr2_4:62054470-62054489 None:intergenic 25.0%
! TGCTATATTGTCTTATAATG+AGG - chr2_4:62054612-62054631 Msa0340690:CDS 25.0%
! CAAAAGTCAATACTAGATTA+AGG - chr2_4:62054635-62054654 Msa0340690:intron 25.0%
!! AAAAAAGAGTATATCCAAAC+AGG + chr2_4:62054663-62054682 None:intergenic 25.0%
! TACTATTAACACCAAAAAAG+TGG + chr2_4:62054692-62054711 None:intergenic 25.0%
! GAAAATCAAAATCATCCTAA+AGG + chr2_4:62054758-62054777 None:intergenic 25.0%
!! TGGCAATTTAGAACTATAAT+CGG + chr2_4:62054952-62054971 None:intergenic 25.0%
! AACACAATTGCAATTATGAA+TGG + chr2_4:62054972-62054991 None:intergenic 25.0%
! TGACCATAAATTGTTATGTT+TGG - chr2_4:62055099-62055118 Msa0340690:intron 25.0%
! ATCTATGATACTTACATCTA+TGG - chr2_4:62055368-62055387 Msa0340690:CDS 25.0%
! CAATAGCAACAAATAAGAAT+TGG + chr2_4:62055598-62055617 None:intergenic 25.0%
! GAAAGAAATAGTACTTCTTT+AGG + chr2_4:62055860-62055879 None:intergenic 25.0%
! ATAGTGTCAATGCATAAATT+AGG + chr2_4:62056046-62056065 None:intergenic 25.0%
! ATTTCAAGAATTTCAAGAGT+GGG + chr2_4:62056356-62056375 None:intergenic 25.0%
! AATTTCAAGAATTTCAAGAG+TGG + chr2_4:62056357-62056376 None:intergenic 25.0%
! ACTCTTGAAATTCTTGAAAT+TGG - chr2_4:62056356-62056375 Msa0340690:intron 25.0%
!!! TTTTATTTCACTGCAAAGTA+TGG - chr2_4:62056435-62056454 Msa0340690:exon 25.0%
! ATAATGTTGACATCATTCTT+GGG - chr2_4:62056474-62056493 Msa0340690:intron 25.0%
! ACTACTATAATATACTCTCA+AGG + chr2_4:62056564-62056583 None:intergenic 25.0%
! AGAGATATGATATGGTTAAA+TGG - chr2_4:62056984-62057003 Msa0340690:intron 25.0%
! TAATTTCAAAATGGCTGTAT+TGG - chr2_4:62057228-62057247 Msa0340690:five_prime_UTR 25.0%
! TCTATCTTCCTTTTTGTGTA+TGG - chr2_4:62053127-62053146 Msa0340690:three_prime_UTR 30.0%
TACATCTTGCAAATCAAGTA+TGG + chr2_4:62053160-62053179 None:intergenic 30.0%
TCTAGAGGTTTATGCTTAAT+TGG - chr2_4:62053664-62053683 Msa0340690:CDS 30.0%
!!! TGTTTTACGTTTTGGTTTTG+TGG + chr2_4:62054117-62054136 None:intergenic 30.0%
!!! TTGTTAACCCATCGATTTTT+CGG + chr2_4:62054416-62054435 None:intergenic 30.0%
ACTTTGATTCCTTTACCTTT+AGG - chr2_4:62054740-62054759 Msa0340690:intron 30.0%
CAAAATCATCCTAAAGGTAA+AGG + chr2_4:62054752-62054771 None:intergenic 30.0%
ATTGGTATATGTGCAATTAG+TGG - chr2_4:62054837-62054856 Msa0340690:intron 30.0%
! TTTTGTATCCATACATCTGT+CGG + chr2_4:62055213-62055232 None:intergenic 30.0%
TGTAATTAACCTTAAAGCAG+AGG + chr2_4:62055446-62055465 None:intergenic 30.0%
! AGCAGCATTTGATAATTCTA+AGG - chr2_4:62055468-62055487 Msa0340690:CDS 30.0%
! GCATTTGATAATTCTAAGGA+TGG - chr2_4:62055472-62055491 Msa0340690:CDS 30.0%
AAGCTCAAAGAATGTTGATA+TGG + chr2_4:62055708-62055727 None:intergenic 30.0%
! GTACTTCTTTAGGTATTGTT+TGG + chr2_4:62055850-62055869 None:intergenic 30.0%
TTACCAAAGATTTAAAAGGC+AGG + chr2_4:62056139-62056158 None:intergenic 30.0%
TTTATCTACAGCAATCCATT+AGG + chr2_4:62056219-62056238 None:intergenic 30.0%
TAATTGCAATGTACAATGTG+TGG - chr2_4:62056310-62056329 Msa0340690:intron 30.0%
AATTGCAATGTACAATGTGT+GGG - chr2_4:62056311-62056330 Msa0340690:intron 30.0%
TTTGCAGTGAAATAAAATGC+TGG + chr2_4:62056432-62056451 None:intergenic 30.0%
GATAATGTTGACATCATTCT+TGG - chr2_4:62056473-62056492 Msa0340690:intron 30.0%
TAATGTTGACATCATTCTTG+GGG - chr2_4:62056475-62056494 Msa0340690:intron 30.0%
!! AGTAGTGTTTAATTTGGAAC+CGG - chr2_4:62056578-62056597 Msa0340690:intron 30.0%
!! TTATGCTTTAAGGATATTGG+TGG + chr2_4:62056698-62056717 None:intergenic 30.0%
GATCTGGTATTTATGCTTTA+AGG + chr2_4:62056708-62056727 None:intergenic 30.0%
TTTCATATAGTATAGGGATC+TGG + chr2_4:62056724-62056743 None:intergenic 30.0%
TTTCTCCATGGTAGATTTAT+AGG - chr2_4:62057085-62057104 Msa0340690:intron 30.0%
TTTATTATTACGCTTGGACA+TGG + chr2_4:62057125-62057144 None:intergenic 30.0%
!!! GCATTTTGTGTTAATTTGCT+TGG + chr2_4:62057174-62057193 None:intergenic 30.0%
ACACAAAATGCATTGAAGTA+TGG - chr2_4:62057183-62057202 Msa0340690:intron 30.0%
GATAGAAGAGCAAAGACTTT+AGG + chr2_4:62053113-62053132 None:intergenic 35.0%
GTGATAGACCATACACAAAA+AGG + chr2_4:62053138-62053157 None:intergenic 35.0%
CAGATTGAAGCCTTAAATTG+AGG - chr2_4:62053561-62053580 Msa0340690:CDS 35.0%
GGGAAAATATGCTGCAATAT+TGG - chr2_4:62053770-62053789 Msa0340690:intron 35.0%
ATATTGGTATGCTTCCTTCT+TGG - chr2_4:62053786-62053805 Msa0340690:intron 35.0%
AAGAACCTGAGTTCAATTTC+TGG - chr2_4:62054324-62054343 Msa0340690:CDS 35.0%
TTCTACCAGAAATTGAACTC+AGG + chr2_4:62054332-62054351 None:intergenic 35.0%
! CTCTTTTCCGAAAAATCGAT+GGG - chr2_4:62054406-62054425 Msa0340690:intron 35.0%
ACTAGATTAAGGAACCTGTT+TGG - chr2_4:62054646-62054665 Msa0340690:intron 35.0%
TAGTTGGATTTAGCAACATC+TGG - chr2_4:62054792-62054811 Msa0340690:intron 35.0%
GATTTAGCAACATCTGGTAA+AGG - chr2_4:62054798-62054817 Msa0340690:intron 35.0%
!! AATGAATTCTGGCTTCATGT+AGG + chr2_4:62054916-62054935 None:intergenic 35.0%
ATTCAATTCCGACAGATGTA+TGG - chr2_4:62055202-62055221 Msa0340690:CDS 35.0%
TAAGCGTGAGTTTGATTATG+CGG + chr2_4:62055349-62055368 None:intergenic 35.0%
ATGTTACAGTCTTTCCTATG+TGG - chr2_4:62055397-62055416 Msa0340690:CDS 35.0%
! TCTAAGGATGGTCTTAGAAA+AGG - chr2_4:62055484-62055503 Msa0340690:CDS 35.0%
GTACGGTAGTATTTCACAAT+TGG + chr2_4:62055770-62055789 None:intergenic 35.0%
! TGAGAAAGTTTGAGACACAT+TGG + chr2_4:62055897-62055916 None:intergenic 35.0%
!!! ATTTCCCTTTTTTCAGGATG+AGG - chr2_4:62055944-62055963 Msa0340690:intron 35.0%
TGATCCTCATCCTGAAAAAA+GGG + chr2_4:62055951-62055970 None:intergenic 35.0%
ATGATCCTCATCCTGAAAAA+AGG + chr2_4:62055952-62055971 None:intergenic 35.0%
! TTGACACTATCTATTTTCCC+TGG - chr2_4:62056056-62056075 Msa0340690:intron 35.0%
TATCTTCAGACAGAAATCCA+GGG + chr2_4:62056076-62056095 None:intergenic 35.0%
! CTACCTGCCTTTTAAATCTT+TGG - chr2_4:62056133-62056152 Msa0340690:intron 35.0%
! TTTTACGAATCGAAACGACA+AGG - chr2_4:62056186-62056205 Msa0340690:intron 35.0%
TACAATGTGTGGGATCTAAT+AGG - chr2_4:62056321-62056340 Msa0340690:intron 35.0%
ATGTCATAACACAAACAGTG+AGG + chr2_4:62056515-62056534 None:intergenic 35.0%
GGTCTTACCTTATAACCTTT+GGG + chr2_4:62056543-62056562 None:intergenic 35.0%
AGGTCTTACCTTATAACCTT+TGG + chr2_4:62056544-62056563 None:intergenic 35.0%
!! GTAGTGTTTAATTTGGAACC+GGG - chr2_4:62056579-62056598 Msa0340690:intron 35.0%
GATGGCTGTTTGATCAAAAT+CGG - chr2_4:62056640-62056659 Msa0340690:intron 35.0%
TTGATCAAAATCGGATAGTC+TGG - chr2_4:62056649-62056668 Msa0340690:intron 35.0%
!! TTTCCCAAAGCATTTTGTTC+TGG + chr2_4:62056790-62056809 None:intergenic 35.0%
!! AAATGCTTTGGGAAACTTGT+TGG - chr2_4:62056795-62056814 Msa0340690:intron 35.0%
!! TTGTTGGTGTTGTTTCTACT+TGG - chr2_4:62056811-62056830 Msa0340690:intron 35.0%
!!! TACTTGGAGGTATTTTTGCA+GGG - chr2_4:62056827-62056846 Msa0340690:intron 35.0%
TCTCAATAAGCACAAACTAC+AGG - chr2_4:62056894-62056913 Msa0340690:intron 35.0%
TACAGGAATAGTTGTGATTG+AGG - chr2_4:62056911-62056930 Msa0340690:intron 35.0%
GGTTAAATGGCACAACAAAA+AGG - chr2_4:62056997-62057016 Msa0340690:intron 35.0%
!! GTGTATGTGTCATTTACACA+AGG - chr2_4:62057019-62057038 Msa0340690:intron 35.0%
!! ATGTGTCATTTACACAAGGA+AGG - chr2_4:62057023-62057042 Msa0340690:intron 35.0%
!! TGTGTCATTTACACAAGGAA+GGG - chr2_4:62057024-62057043 Msa0340690:intron 35.0%
TACCTCCTATAAATCTACCA+TGG + chr2_4:62057093-62057112 None:intergenic 35.0%
AAATGCATTGAAGTATGGTG+AGG - chr2_4:62057188-62057207 Msa0340690:intron 35.0%
! TTGAATTTTCTGCGCTTTAG+TGG - chr2_4:62057259-62057278 Msa0340690:five_prime_UTR 35.0%
GTACACTCGTGTGTCATAAA+AGG - chr2_4:62052978-62052997 Msa0340690:three_prime_UTR 40.0%
! GAAGAGCAAAGACTTTAGGA+AGG + chr2_4:62053109-62053128 None:intergenic 40.0%
AATAATTCAAGGCAGAGCCA+TGG - chr2_4:62053619-62053638 Msa0340690:CDS 40.0%
AAAGACATCCATTGCCAAGA+AGG + chr2_4:62053803-62053822 None:intergenic 40.0%
! GCAATGGATGTCTTTTCTCT+TGG - chr2_4:62053808-62053827 Msa0340690:intron 40.0%
TCGCTAAGCTCAATCTATGT+TGG + chr2_4:62054014-62054033 None:intergenic 40.0%
AACCAAGAAATTTCCCCAAG+TGG - chr2_4:62054274-62054293 Msa0340690:CDS 40.0%
TCTCAGATCATTGACCACTT+GGG + chr2_4:62054291-62054310 None:intergenic 40.0%
TTCTCAGATCATTGACCACT+TGG + chr2_4:62054292-62054311 None:intergenic 40.0%
ATCGGGAAGTAAGTAAAGTC+TGG + chr2_4:62054365-62054384 None:intergenic 40.0%
!!! CCATCGATTTTTCGGAAAAG+AGG + chr2_4:62054408-62054427 None:intergenic 40.0%
! CCTCTTTTCCGAAAAATCGA+TGG - chr2_4:62054405-62054424 Msa0340690:intron 40.0%
ATGTGCTTCTCCTTGTATGT+TGG - chr2_4:62054457-62054476 Msa0340690:intron 40.0%
GGATGATAATTCTGCACATG+AGG + chr2_4:62054544-62054563 None:intergenic 40.0%
TTAGCAACATCTGGTAAAGG+AGG - chr2_4:62054801-62054820 Msa0340690:intron 40.0%
! GGAGGACTTGGAACTTTTAT+TGG - chr2_4:62054819-62054838 Msa0340690:intron 40.0%
CATGTTCAAGGTGGAATGAT+TGG - chr2_4:62054882-62054901 Msa0340690:intron 40.0%
CATGAAGCCAGAATTCATTC+AGG - chr2_4:62054917-62054936 Msa0340690:intron 40.0%
TAGCTGACCTGAATGAATTC+TGG + chr2_4:62054927-62054946 None:intergenic 40.0%
! CTGCATTTTACGCGATATCA+AGG - chr2_4:62054999-62055018 Msa0340690:intron 40.0%
ACAGTCTTTCCTATGTGGTT+TGG - chr2_4:62055402-62055421 Msa0340690:CDS 40.0%
GTGCATTAACCTCTGCTTTA+AGG - chr2_4:62055434-62055453 Msa0340690:CDS 40.0%
!!! CTTCTGATGCTGCTTTTGTA+CGG + chr2_4:62055787-62055806 None:intergenic 40.0%
AGCATCAGAAGGATCCAAAA+CGG - chr2_4:62055796-62055815 Msa0340690:intron 40.0%
! AAGATCAGCTGAAACCGTTT+TGG + chr2_4:62055813-62055832 None:intergenic 40.0%
ATCATGCACACAAACAAGAG+AGG - chr2_4:62055967-62055986 Msa0340690:intron 40.0%
GTATCTTCAGACAGAAATCC+AGG + chr2_4:62056077-62056096 None:intergenic 40.0%
GGATTTCTGTCTGAAGATAC+CGG - chr2_4:62056077-62056096 Msa0340690:intron 40.0%
TGTTCCTAAACTATGTGCTC+CGG + chr2_4:62056099-62056118 None:intergenic 40.0%
GAGCACATAGTTTAGGAACA+TGG - chr2_4:62056099-62056118 Msa0340690:intron 40.0%
TACAGCAATCCATTAGGAGT+TGG + chr2_4:62056213-62056232 None:intergenic 40.0%
ACTGCAAAGTATGGTGATCA+AGG - chr2_4:62056444-62056463 Msa0340690:five_prime_UTR 40.0%
CAAAGTATGGTGATCAAGGT+TGG - chr2_4:62056448-62056467 Msa0340690:five_prime_UTR 40.0%
ACAAACAGTGAGGTAACCAT+TGG + chr2_4:62056505-62056524 None:intergenic 40.0%
ATCTGCACCCAAAGGTTATA+AGG - chr2_4:62056533-62056552 Msa0340690:intron 40.0%
ATATCTCGAATGCGTGAATG+CGG + chr2_4:62056619-62056638 None:intergenic 40.0%
!!! ACCGTTCGGTTTTGATTGAA+CGG - chr2_4:62056672-62056691 Msa0340690:intron 40.0%
GGTCCAGAACAAAATGCTTT+GGG - chr2_4:62056784-62056803 Msa0340690:intron 40.0%
!! TTGGTGTTGTTTCTACTTGG+AGG - chr2_4:62056814-62056833 Msa0340690:intron 40.0%
!!! CTACTTGGAGGTATTTTTGC+AGG - chr2_4:62056826-62056845 Msa0340690:intron 40.0%
!!! ACTTGGAGGTATTTTTGCAG+GGG - chr2_4:62056828-62056847 Msa0340690:intron 40.0%
!! GTGTCATTTACACAAGGAAG+GGG - chr2_4:62057025-62057044 Msa0340690:intron 40.0%
! TAAAAGGGTCTGTTTCTCCA+TGG - chr2_4:62057073-62057092 Msa0340690:intron 40.0%
CTCCATGGTAGATTTATAGG+AGG - chr2_4:62057088-62057107 Msa0340690:intron 40.0%
CAAACATGAACACGCCAAGA+AGG + chr2_4:62052811-62052830 None:intergenic 45.0%
TGTCTTTCTCAGCACTTCTG+TGG - chr2_4:62052829-62052848 Msa0340690:three_prime_UTR 45.0%
TAAACCTCTAGACGTGTTGG+AGG + chr2_4:62053656-62053675 None:intergenic 45.0%
GCATAAACCTCTAGACGTGT+TGG + chr2_4:62053659-62053678 None:intergenic 45.0%
GTATGCTTCCTTCTTGGCAA+TGG - chr2_4:62053792-62053811 Msa0340690:intron 45.0%
GACCACTTGGGGAAATTTCT+TGG + chr2_4:62054279-62054298 None:intergenic 45.0%
CTCAGATCATTGACCACTTG+GGG + chr2_4:62054290-62054309 None:intergenic 45.0%
TGCAGAATTATCATCCCTCC+AGG - chr2_4:62054548-62054567 Msa0340690:intron 45.0%
GCAGAATTATCATCCCTCCA+GGG - chr2_4:62054549-62054568 Msa0340690:intron 45.0%
GTATACAAGTGTAAGCACCC+TGG + chr2_4:62054569-62054588 None:intergenic 45.0%
GTATACCAGCCATTTGCAGT+TGG - chr2_4:62054583-62054602 Msa0340690:CDS 45.0%
GCAAGTGTTCCAACTGCAAA+TGG + chr2_4:62054595-62054614 None:intergenic 45.0%
ACATCTGGTAAAGGAGGACT+TGG - chr2_4:62054807-62054826 Msa0340690:intron 45.0%
TGTGCAATTAGTGGTGCCTT+TGG - chr2_4:62054846-62054865 Msa0340690:intron 45.0%
ATGAGCATCTGCAACTCCAA+AGG + chr2_4:62054865-62054884 None:intergenic 45.0%
GTTGCAGATGCTCATGTTCA+AGG - chr2_4:62054870-62054889 Msa0340690:intron 45.0%
CGTACAAAAGCAGCATCAGA+AGG - chr2_4:62055785-62055804 Msa0340690:intron 45.0%
TGCACACAAACAAGAGAGGA+AGG - chr2_4:62055971-62055990 Msa0340690:intron 45.0%
GCACACAAACAAGAGAGGAA+GGG - chr2_4:62055972-62055991 Msa0340690:intron 45.0%
ACAAGAGAGGAAGGGAAACA+AGG - chr2_4:62055980-62055999 Msa0340690:intron 45.0%
GATACCGGAGCACATAGTTT+AGG - chr2_4:62056092-62056111 Msa0340690:intron 45.0%
TCATTCTTGGGGCTATCCAA+TGG - chr2_4:62056486-62056505 Msa0340690:intron 45.0%
GTTATGACATCTGCACCCAA+AGG - chr2_4:62056525-62056544 Msa0340690:intron 45.0%
TATCTCGAATGCGTGAATGC+GGG + chr2_4:62056618-62056637 None:intergenic 45.0%
TCACGCATTCGAGATATCGA+TGG - chr2_4:62056622-62056641 Msa0340690:intron 45.0%
GCCGTTCAATCAAAACCGAA+CGG + chr2_4:62056676-62056695 None:intergenic 45.0%
GGGTCCAGAACAAAATGCTT+TGG - chr2_4:62056783-62056802 Msa0340690:intron 45.0%
! CTAGACTGGTTGTGGTTGAT+AGG - chr2_4:62056856-62056875 Msa0340690:intron 45.0%
!! TGGTTGTGGTTGATAGGCAA+AGG - chr2_4:62056862-62056881 Msa0340690:intron 45.0%
!! TGTGGTTGATAGGCAAAGGT+TGG - chr2_4:62056866-62056885 Msa0340690:intron 45.0%
TCTGCGCTTTAGTGGTTCAT+CGG - chr2_4:62057267-62057286 Msa0340690:five_prime_UTR 45.0%
!! GTAATTAAATTATTATAAAT+TGG + chr2_4:62054209-62054228 None:intergenic 5.0%
!!! AATTTGAAATTAAAATAAAA+TGG + chr2_4:62056167-62056186 None:intergenic 5.0%
!!! AATTTTTTTAACAAATAAAA+GGG - chr2_4:62057058-62057077 Msa0340690:intron 5.0%
GACTCTTCCCTCTTCCTTCT+TGG - chr2_4:62052794-62052813 Msa0340690:three_prime_UTR 50.0%
GAACACGCCAAGAAGGAAGA+GGG + chr2_4:62052804-62052823 None:intergenic 50.0%
TGAACACGCCAAGAAGGAAG+AGG + chr2_4:62052805-62052824 None:intergenic 50.0%
ACAAGTGTAAGCACCCTGGA+GGG + chr2_4:62054565-62054584 None:intergenic 50.0%
TACAAGTGTAAGCACCCTGG+AGG + chr2_4:62054566-62054585 None:intergenic 50.0%
GTGTTCCAACTGCAAATGGC+TGG + chr2_4:62054591-62054610 None:intergenic 50.0%
GCAGATGCTCATGTTCAAGG+TGG - chr2_4:62054873-62054892 Msa0340690:intron 50.0%
CAGATGCTGCCAAACCACAT+AGG + chr2_4:62055414-62055433 None:intergenic 50.0%
! CTATGTGGTTTGGCAGCATC+TGG - chr2_4:62055412-62055431 Msa0340690:CDS 50.0%
GTTTCAGCTGATCTTGCAGC+TGG - chr2_4:62055818-62055837 Msa0340690:intron 50.0%
CGACAAGGACCAACTCCTAA+TGG - chr2_4:62056201-62056220 Msa0340690:CDS 50.0%
! TTAATTTGGAACCGGGTCCC+TGG - chr2_4:62056586-62056605 Msa0340690:intron 50.0%
! TAATTTGGAACCGGGTCCCT+GGG - chr2_4:62056587-62056606 Msa0340690:intron 50.0%
ATCGGATAGTCTGGACCGTT+CGG - chr2_4:62056658-62056677 Msa0340690:intron 50.0%
TTGCAGGGGTTACACTAGAC+TGG - chr2_4:62056842-62056861 Msa0340690:intron 50.0%
! GGGTTACACTAGACTGGTTG+TGG - chr2_4:62056848-62056867 Msa0340690:intron 50.0%
TGGAGGCTCAACGTTGACCA+TGG + chr2_4:62053639-62053658 None:intergenic 55.0%
TGAGCCTCCAACACGTCTAG+AGG - chr2_4:62053649-62053668 Msa0340690:CDS 55.0%
TCAGCTGATCTTGCAGCTGG+TGG - chr2_4:62055821-62055840 Msa0340690:intron 55.0%
! AATTTGGAACCGGGTCCCTG+GGG - chr2_4:62056588-62056607 Msa0340690:intron 55.0%
GTGAATGCGGGAAATCCCCA+GGG + chr2_4:62056606-62056625 None:intergenic 55.0%
CGTGAATGCGGGAAATCCCC+AGG + chr2_4:62056607-62056626 None:intergenic 60.0%
GCGGGAAATCCCCAGGGACC+CGG + chr2_4:62056600-62056619 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 62052729 62057346 62052729 ID=Msa0340690;Name=Msa0340690
chr2_4 mRNA 62052729 62057346 62052729 ID=Msa0340690-mRNA-1;Parent=Msa0340690;Name=Msa0340690-mRNA-1;_AED=0.14;_eAED=0.14;_QI=191|0.88|0.9|1|0.88|0.8|10|455|413
chr2_4 exon 62052729 62053291 62052729 ID=Msa0340690-mRNA-1:exon:19679;Parent=Msa0340690-mRNA-1
chr2_4 exon 62053521 62053779 62053521 ID=Msa0340690-mRNA-1:exon:19678;Parent=Msa0340690-mRNA-1
chr2_4 exon 62053955 62054115 62053955 ID=Msa0340690-mRNA-1:exon:19677;Parent=Msa0340690-mRNA-1
chr2_4 exon 62054210 62054382 62054210 ID=Msa0340690-mRNA-1:exon:19676;Parent=Msa0340690-mRNA-1
chr2_4 exon 62054564 62054647 62054564 ID=Msa0340690-mRNA-1:exon:19675;Parent=Msa0340690-mRNA-1
chr2_4 exon 62055118 62055280 62055118 ID=Msa0340690-mRNA-1:exon:19674;Parent=Msa0340690-mRNA-1
chr2_4 exon 62055367 62055522 62055367 ID=Msa0340690-mRNA-1:exon:19673;Parent=Msa0340690-mRNA-1
chr2_4 exon 62056200 62056304 62056200 ID=Msa0340690-mRNA-1:exon:19672;Parent=Msa0340690-mRNA-1
chr2_4 exon 62056405 62056473 62056405 ID=Msa0340690-mRNA-1:exon:19671;Parent=Msa0340690-mRNA-1
chr2_4 exon 62057192 62057346 62057192 ID=Msa0340690-mRNA-1:exon:19670;Parent=Msa0340690-mRNA-1
chr2_4 five_prime_UTR 62057192 62057346 62057192 ID=Msa0340690-mRNA-1:five_prime_utr;Parent=Msa0340690-mRNA-1
chr2_4 five_prime_UTR 62056438 62056473 62056438 ID=Msa0340690-mRNA-1:five_prime_utr;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62056405 62056437 62056405 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62056200 62056304 62056200 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62055367 62055522 62055367 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62055118 62055280 62055118 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62054564 62054647 62054564 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62054210 62054382 62054210 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62053955 62054115 62053955 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62053521 62053779 62053521 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 CDS 62053184 62053291 62053184 ID=Msa0340690-mRNA-1:cds;Parent=Msa0340690-mRNA-1
chr2_4 three_prime_UTR 62052729 62053183 62052729 ID=Msa0340690-mRNA-1:three_prime_utr;Parent=Msa0340690-mRNA-1
Gene Sequence

>Msa0340690

ATGGTCAACGTTGAGCCTCCAACACGTCTAGAGGGAAAATATGCTGCAATATTGGTATGCTTCCTTCTTGGCAATGGATGTCTTTTCTCTTGGAACAGTATGCTCACAATAGAAGATTACTACATTTACTTGTTTCCGAATTATCATCCCTCCAGGGTGCTTACACTTGTATACCAGCCATTTGCAGTTGGAACACTTGCTATATTGTCTTATAATGAGGCAAAAGTCAATACTAGATTAAGGAACCTGTTTGGATATACTCTTTTTTTCATAACCACTTTTTTGGTGTTAATATTGGATTTAGCAACATCTGGTAAAGGAGGACTTGGAACTTTTATTGGTATATGTGCAATTAGTGGTGCCTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGATTGGAGACTTGTCCTACATGAAGCCAGAATTCATTCAGGTCAGCTATACCGATTATACATCTGGTGCATTAACCTCTGCTTTAAGGTTAATTACAAAAGCAGCATTTGATAATTCTAAGGATGGTCTTAGAAAAGGAGCTATTCTATTCTTTGCCATATCAACATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATTTGTTTTTCCTAAAATACCAATTGTGAAATACTACCGTACAAAAGCAGCATCAGAAGGATCCAAAACGGTTTCAGCTGATCTTGCAGCTGGTGGCATCCAAACAATACCTAAAGAAGATGAGGATCATGCACACAAACAAGAGAGGAAGGGAAACAAGGAATTGTTTTTTGAAAACATTGATTATTTACTTGATATGTTCCTAATTTATGCATTGACACTATCTATTTTCCCTGGATTTCTGTCTGAAGATACCGGAGCACATAGTTTAGGAACATGGTATGCTCTTGTGTTAATTGCAATGTACAATGTGTGGGATCTAATAGGAAGATACATCCCACTCTTGAAATTCTTGAAATTGGAGTCAAGAAAGATGATCACAGTAGCAATACTATGTCGTTTCTTACTTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGATCAAGGTTGGATGATAATGTTGACATCATTCTTGGGGCTATCCAATGGTTACCTCACTGTTTGTGTTATGACATCTGCACCCAAAGGTTATAAGGGTCCAGAACAAAATGCTTTGGGAAACTTGTTGGTGTTGTTTCTACTTGGAGGTATTTTTGCAGGGGTTACACTAGACTGGTTGTGGTTGATAGGCAAAGGTTGGTGA

Protein sequence

>Msa0340690

MVNVEPPTRLEGKYAAILVCFLLGNGCLFSWNSMLTIEDYYIYLFPNYHPSRVLTLVYQPFAVGTLAILSYNEAKVNTRLRNLFGYTLFFITTFLVLILDLATSGKGGLGTFIGICAISGAFGVADAHVQGGMIGDLSYMKPEFIQVSYTDYTSGALTSALRLITKAAFDNSKDGLRKGAILFFAISTFFELLCVLLYAFVFPKIPIVKYYRTKAASEGSKTVSADLAAGGIQTIPKEDEDHAHKQERKGNKELFFENIDYLLDMFLIYALTLSIFPGFLSEDTGAHSLGTWYALVLIAMYNVWDLIGRYIPLLKFLKLESRKMITVAILCRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW*