Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168700 | XP_013449990.2 | 98.269 | 520 | 8 | 1 | 1 | 520 | 1 | 519 | 0.0 | 1048 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168700 | sp|P27990|PALY_MEDSA | 96.538 | 520 | 18 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168700 | A0A396H6R9 | 98.269 | 520 | 8 | 1 | 1 | 520 | 1 | 519 | 0.0 | 1048 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1079360 | Msa1168700 | 0.848761 | 4.989056e-60 | -8.615850e-47 |
| Msa1079390 | Msa1168700 | 0.892291 | 1.817099e-74 | -8.615850e-47 |
| Msa1079400 | Msa1168700 | 0.944017 | 4.210927e-103 | -8.615850e-47 |
| Msa1123600 | Msa1168700 | 0.916145 | 2.531322e-85 | -8.615850e-47 |
| Msa1123610 | Msa1168700 | 0.818612 | 1.790163e-52 | -8.615850e-47 |
| Msa1168520 | Msa1168700 | 0.870113 | 1.864257e-66 | -8.615850e-47 |
| Msa1168530 | Msa1168700 | 0.948168 | 1.608766e-106 | -8.615850e-47 |
| Msa1168620 | Msa1168700 | 0.939873 | 6.100014e-100 | -8.615850e-47 |
| Msa1168700 | Msa1168710 | 0.943210 | 1.814283e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168700 | MtrunA17_Chr7g0264311 | 98.269 | 520 | 8 | 1 | 1 | 520 | 1 | 519 | 0.0 | 1048 |
| Msa1168700 | MtrunA17_Chr7g0264341 | 97.885 | 520 | 10 | 1 | 1 | 520 | 1 | 519 | 0.0 | 1044 |
| Msa1168700 | MtrunA17_Chr7g0264351 | 97.692 | 520 | 11 | 1 | 1 | 520 | 1 | 519 | 0.0 | 1042 |
| Msa1168700 | MtrunA17_Chr1g0181091 | 91.400 | 500 | 43 | 0 | 21 | 520 | 8 | 507 | 0.0 | 947 |
| Msa1168700 | MtrunA17_Chr1g0199551 | 81.637 | 501 | 92 | 0 | 20 | 520 | 17 | 517 | 0.0 | 860 |
| Msa1168700 | MtrunA17_Chr2g0326921 | 79.757 | 494 | 97 | 2 | 28 | 520 | 1 | 492 | 0.0 | 804 |
| Msa1168700 | MtrunA17_Chr5g0448361 | 77.092 | 502 | 113 | 2 | 20 | 520 | 4 | 504 | 0.0 | 792 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168700 | AT2G37040.1 | 86.032 | 494 | 69 | 0 | 27 | 520 | 27 | 520 | 0.0 | 892 |
| Msa1168700 | AT3G53260.1 | 85.861 | 488 | 69 | 0 | 33 | 520 | 25 | 512 | 0.0 | 877 |
| Msa1168700 | AT3G10340.1 | 84.909 | 497 | 73 | 2 | 25 | 520 | 7 | 502 | 0.0 | 867 |
| Msa1168700 | AT5G04230.1 | 81.059 | 491 | 87 | 3 | 33 | 520 | 12 | 499 | 0.0 | 815 |
| Msa1168700 | AT5G04230.2 | 80.404 | 495 | 87 | 4 | 33 | 520 | 12 | 503 | 0.0 | 809 |
Find 148 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAGGTTTCTTTCTAATT+TGG | 0.138990 | 7_4:-61484011 | None:intergenic |
| TGCTATTATGGAACACATTT+TGG | 0.178379 | 7_4:+61485805 | Msa1168700:CDS |
| TCTCTTTGAGGCTAACATTT+TGG | 0.190344 | 7_4:+61485667 | Msa1168700:CDS |
| GGTCCATGAGCTTTGGAATT+TGG | 0.199307 | 7_4:-61485509 | None:intergenic |
| TTCCATTCTTATAAAATTCT+AGG | 0.206360 | 7_4:+61484110 | Msa1168700:five_prime_UTR |
| AATTGAGGCTGCTGCTATTA+TGG | 0.231999 | 7_4:+61485793 | Msa1168700:CDS |
| AGTGCATATCTATCTTGTTT+TGG | 0.270938 | 7_4:-61485887 | None:intergenic |
| CTGCAAAGCACCACCTTGTT+TGG | 0.301759 | 7_4:-61484571 | None:intergenic |
| CAACCAAGATGTGAACTCTT+TGG | 0.302868 | 7_4:+61486309 | Msa1168700:CDS |
| AGAAATCCTAGCTTGGATTA+TGG | 0.318763 | 7_4:+61486190 | Msa1168700:CDS |
| GTTCCTCTTTCATACATTGC+TGG | 0.323630 | 7_4:+61485470 | Msa1168700:CDS |
| AACTTTCAAGGAACACCTAT+TGG | 0.329701 | 7_4:+61486046 | Msa1168700:CDS |
| AGCTTTGGAATTTGGTCTTC+CGG | 0.346211 | 7_4:-61485501 | None:intergenic |
| AACGGAACAGCTGTTGGTTC+CGG | 0.347424 | 7_4:+61485629 | Msa1168700:CDS |
| AGTAGTTAGGCTTTATATAG+AGG | 0.352906 | 7_4:-61484027 | None:intergenic |
| AGGAATTCGATTTGAAATCT+TGG | 0.354058 | 7_4:+61485367 | Msa1168700:CDS |
| TCCAGATGGTCCATGAGCTT+TGG | 0.356557 | 7_4:-61485516 | None:intergenic |
| AACCAAGATGTGAACTCTTT+GGG | 0.363040 | 7_4:+61486310 | Msa1168700:CDS |
| ATGGAGTAACGTTGTTGTTA+AGG | 0.365275 | 7_4:-61485406 | None:intergenic |
| ACCCTCCTCCAAGGTTATTC+AGG | 0.367094 | 7_4:+61485347 | Msa1168700:CDS |
| AGCTTCTATTGTTCTCTTTG+AGG | 0.369188 | 7_4:+61485655 | Msa1168700:CDS |
| CTTTGGACGTGGGTTGTAAC+CGG | 0.385789 | 7_4:-61486274 | None:intergenic |
| TACCACCACACAACAAATAA+AGG | 0.386653 | 7_4:+61484133 | Msa1168700:five_prime_UTR |
| GAAGGCCTTGCCCTTGTTAA+CGG | 0.392707 | 7_4:+61485611 | Msa1168700:CDS |
| CTACTCGCAGAAAGATTTGA+AGG | 0.395081 | 7_4:-61486169 | None:intergenic |
| GAGTTAAGGCCAGCAGTGAC+TGG | 0.396808 | 7_4:+61484472 | Msa1168700:CDS |
| TCCAAAGCTCATGGACCATC+TGG | 0.398114 | 7_4:+61485515 | Msa1168700:CDS |
| AACTACTTCCTTCACAAATC+AGG | 0.398972 | 7_4:+61484043 | Msa1168700:five_prime_UTR |
| ATGAAGCTGATCCTTTGAAT+TGG | 0.399923 | 7_4:+61484271 | Msa1168700:CDS |
| TACGGTGTCACCACCGGGTT+CGG | 0.400782 | 7_4:+61484528 | Msa1168700:CDS |
| GATTTGTGAAGGAAGTAGTT+AGG | 0.403389 | 7_4:-61484040 | None:intergenic |
| TACATTGCTGGTTTACTAAC+CGG | 0.404088 | 7_4:+61485482 | Msa1168700:CDS |
| GTTACAATATCTTGCAAATC+CGG | 0.407527 | 7_4:+61486255 | Msa1168700:CDS |
| CGCGGTACAATCACAGCTTC+AGG | 0.409342 | 7_4:+61485440 | Msa1168700:CDS |
| TGAAGCTGATCCTTTGAATT+GGG | 0.415897 | 7_4:+61484272 | Msa1168700:CDS |
| AATCAAGCAGAATGATTCAT+TGG | 0.416820 | 7_4:-61484217 | None:intergenic |
| TAATCAATACTATTAAGATA+TGG | 0.423342 | 7_4:+61484161 | Msa1168700:exon |
| CAAGACGGACCACCGGCTTC+CGG | 0.424699 | 7_4:-61484359 | None:intergenic |
| GAATGGAAATTCTAATGATT+AGG | 0.425172 | 7_4:-61484095 | None:intergenic |
| ATCTGCTAGGGATGGAGTTA+AGG | 0.427510 | 7_4:+61484458 | Msa1168700:CDS |
| TAGCTTGGATTATGGTTTCA+AGG | 0.427578 | 7_4:+61486198 | Msa1168700:CDS |
| GTCAAATGATCGGTAAATTC+AGG | 0.429420 | 7_4:-61485743 | None:intergenic |
| ACAAGGGCAAGGCCTTCTTT+TGG | 0.433813 | 7_4:-61485605 | None:intergenic |
| GAGGTTTCTTTCTAATTTGG+AGG | 0.442189 | 7_4:-61484008 | None:intergenic |
| GAGAACAATAGAAGCTAAAC+CGG | 0.444891 | 7_4:-61485648 | None:intergenic |
| CGGAAGCCGGTGGTCCGTCT+TGG | 0.445172 | 7_4:+61484360 | Msa1168700:CDS |
| ATATTGTAACTCAGAACAAT+AGG | 0.445191 | 7_4:-61486242 | None:intergenic |
| TTGCATGGTGGAAACTTTCA+AGG | 0.445309 | 7_4:+61486034 | Msa1168700:CDS |
| GTGCGAGGTGGCGCCGAACC+CGG | 0.448163 | 7_4:-61484541 | None:intergenic |
| CTCCATTGACTCCTATGGTA+AGG | 0.453203 | 7_4:+61486640 | Msa1168700:CDS |
| CTCCATCACCCAGTCACTGC+TGG | 0.457530 | 7_4:-61484481 | None:intergenic |
| ATCCATGGATAATACACGTT+TGG | 0.459440 | 7_4:+61486072 | Msa1168700:CDS |
| TTCTTGAAACATCAATCAAA+GGG | 0.465561 | 7_4:-61486003 | None:intergenic |
| TTATCCATGGATACTCCAAT+AGG | 0.467287 | 7_4:-61486061 | None:intergenic |
| ACCCTTACCATAGGAGTCAA+TGG | 0.470176 | 7_4:-61486642 | Msa1168710:CDS |
| AAGCCGGTGGTCCGTCTTGG+TGG | 0.472146 | 7_4:+61484363 | Msa1168700:CDS |
| TTTGAATTACAACCAAAAGA+AGG | 0.473227 | 7_4:+61485593 | Msa1168700:CDS |
| AAGTTCTCCATTGACTCCTA+TGG | 0.475850 | 7_4:+61486635 | Msa1168700:CDS |
| TTTCTTGAAACATCAATCAA+AGG | 0.480962 | 7_4:-61486004 | None:intergenic |
| TGCGAGTAGAAATCCTAGCT+TGG | 0.486374 | 7_4:+61486183 | Msa1168700:CDS |
| AACCCAAAGAGTTCACATCT+TGG | 0.486755 | 7_4:-61486312 | None:intergenic |
| GACAGTTACGGTGTCACCAC+CGG | 0.492715 | 7_4:+61484522 | Msa1168700:CDS |
| AATGCTGGAATATTTGGAAA+CGG | 0.493618 | 7_4:+61485260 | Msa1168700:CDS |
| CGAGACACTGACGATTTCTC+AGG | 0.498607 | 7_4:+61484386 | Msa1168700:CDS |
| GTTGCTCAGCACTTTGGACG+TGG | 0.506514 | 7_4:-61486285 | None:intergenic |
| TGCACATGACCATGGTGTGC+AGG | 0.506601 | 7_4:+61484422 | Msa1168700:CDS |
| AGCTTGGATTATGGTTTCAA+GGG | 0.508311 | 7_4:+61486199 | Msa1168700:CDS |
| ATCGAATTCCTGAATAACCT+TGG | 0.509073 | 7_4:-61485355 | None:intergenic |
| CTTTGCAGAAAGAACTCATA+AGG | 0.510191 | 7_4:+61484586 | Msa1168700:CDS |
| AGCGTATGGTGGAGGAGTAC+CGG | 0.511195 | 7_4:+61484340 | Msa1168700:CDS |
| CAACAGCTGTTCCGTTAACA+AGG | 0.515867 | 7_4:-61485622 | None:intergenic |
| GGTTGTGTTGCTCAGCACTT+TGG | 0.520560 | 7_4:-61486291 | None:intergenic |
| AACAAAGGCACGGACAGTTA+CGG | 0.520670 | 7_4:+61484510 | Msa1168700:CDS |
| TTCCTTTATTTGTTGTGTGG+TGG | 0.524448 | 7_4:-61484135 | None:intergenic |
| CTTGTTAACGGAACAGCTGT+TGG | 0.526260 | 7_4:+61485623 | Msa1168700:CDS |
| GCAGCTCTTGTTGCTGTGTG+TGG | 0.526517 | 7_4:-61485305 | None:intergenic |
| GCATTAAGTATTTCTCCAGA+TGG | 0.528134 | 7_4:-61485530 | None:intergenic |
| AAACCAGCAATGTATGAAAG+AGG | 0.530089 | 7_4:-61485473 | None:intergenic |
| TGGAGCTGTCTGAATCTGCT+AGG | 0.530940 | 7_4:+61484445 | Msa1168700:CDS |
| CGTTTGGCACTCGCATCGAT+TGG | 0.531219 | 7_4:+61486088 | Msa1168700:CDS |
| TCCATTGACTCCTATGGTAA+GGG | 0.533701 | 7_4:+61486641 | Msa1168700:CDS |
| CAACTTGTGTGTCAAATGAT+CGG | 0.535020 | 7_4:-61485753 | None:intergenic |
| AACACCTATTGGAGTATCCA+TGG | 0.535388 | 7_4:+61486057 | Msa1168700:CDS |
| AGACCAAATTCCAAAGCTCA+TGG | 0.537132 | 7_4:+61485506 | Msa1168700:CDS |
| GGCCAGCAGTGACTGGGTGA+TGG | 0.539190 | 7_4:+61484479 | Msa1168700:CDS |
| CAAGGGAGCTGAAATTGCCA+TGG | 0.539446 | 7_4:+61486216 | Msa1168700:CDS |
| ACCATGGTCATGTGCAGCAA+TGG | 0.541335 | 7_4:-61484415 | None:intergenic |
| TGCCAAACGTGTATTATCCA+TGG | 0.541802 | 7_4:-61486074 | None:intergenic |
| AGAACTTCACCACAATGGCT+TGG | 0.541972 | 7_4:+61485911 | Msa1168700:CDS |
| CTCAGAACAATAGGAAGCCA+TGG | 0.547791 | 7_4:-61486233 | None:intergenic |
| TTCCTGAATAACCTTGGAGG+AGG | 0.550585 | 7_4:-61485349 | None:intergenic |
| AATCGAATCACTTCAATCAA+AGG | 0.551824 | 7_4:-61485935 | None:intergenic |
| ATGTTCCTTTATTTGTTGTG+TGG | 0.553831 | 7_4:-61484138 | None:intergenic |
| TTGAAACCATAATCCAAGCT+AGG | 0.555782 | 7_4:-61486196 | None:intergenic |
| ACTCCATGTTTACCACTTCG+CGG | 0.558758 | 7_4:+61485422 | Msa1168700:CDS |
| GATCTCTCTCTCAATTGACT+TGG | 0.558820 | 7_4:-61485963 | None:intergenic |
| TCAAGAAACAAAGCTTTGCA+TGG | 0.562486 | 7_4:+61486019 | Msa1168700:CDS |
| AAGCACCACCTTGTTTGGTA+CGG | 0.564097 | 7_4:-61484566 | None:intergenic |
| GGTGGAGGAGTACCGGAAGC+CGG | 0.566790 | 7_4:+61484347 | Msa1168700:CDS |
| CTGTCTGAATCTGCTAGGGA+TGG | 0.567492 | 7_4:+61484450 | Msa1168700:CDS |
| GTTGTTAAGGAGATTTGTGA+TGG | 0.568421 | 7_4:-61485393 | None:intergenic |
| ACACCACCCTGGTCAAATTG+AGG | 0.572511 | 7_4:+61485778 | Msa1168700:CDS |
| GCAGCAGCCTCAATTTGACC+AGG | 0.576243 | 7_4:-61485785 | None:intergenic |
| TTTGGTACGGCGGTGCGAGG+TGG | 0.578567 | 7_4:-61484553 | None:intergenic |
| GCTGCCACACCCCAATTCAA+AGG | 0.581598 | 7_4:-61484282 | None:intergenic |
| TCGCCACCAAGACGGACCAC+CGG | 0.582161 | 7_4:-61484366 | None:intergenic |
| TCGCACCGCCGTACCAAACA+AGG | 0.582783 | 7_4:+61484558 | Msa1168700:CDS |
| CATGAGCTGAAGGATCTCAA+TGG | 0.583537 | 7_4:-61486362 | None:intergenic |
| GAATTCCTGAATAACCTTGG+AGG | 0.584127 | 7_4:-61485352 | None:intergenic |
| TGAGGTGAAGCGTATGGTGG+AGG | 0.584737 | 7_4:+61484332 | Msa1168700:CDS |
| ATCAAAGGACCAAGCCATTG+TGG | 0.585110 | 7_4:-61485920 | None:intergenic |
| GCCATTGCTGCACATGACCA+TGG | 0.585263 | 7_4:+61484414 | Msa1168700:CDS |
| TGATCCTTTGAATTGGGGTG+TGG | 0.587095 | 7_4:+61484278 | Msa1168700:CDS |
| AGGTGGAAGACATGAGCTGA+AGG | 0.588332 | 7_4:-61486372 | None:intergenic |
| GTGGCAGCTGAGGCAATGAA+AGG | 0.593497 | 7_4:+61484297 | Msa1168700:CDS |
| AGTTAAGGCCAGCAGTGACT+GGG | 0.595378 | 7_4:+61484473 | Msa1168700:CDS |
| CACCACCTTGTTTGGTACGG+CGG | 0.598168 | 7_4:-61484563 | None:intergenic |
| GTGAATTTCCTGATTTGTGA+AGG | 0.598768 | 7_4:-61484051 | None:intergenic |
| TTGTTTGGTACGGCGGTGCG+AGG | 0.600854 | 7_4:-61484556 | None:intergenic |
| TTGCTGTGTGTGGAAGTGTG+TGG | 0.602528 | 7_4:-61485295 | None:intergenic |
| TTGCTCAGCACTTTGGACGT+GGG | 0.604189 | 7_4:-61486284 | None:intergenic |
| AGAATCAACACCCTCCTCCA+AGG | 0.605709 | 7_4:+61485338 | Msa1168700:CDS |
| CACTTAGAACTTCACCACAA+TGG | 0.606171 | 7_4:+61485906 | Msa1168700:CDS |
| GGAGCTGTCTGAATCTGCTA+GGG | 0.606450 | 7_4:+61484446 | Msa1168700:CDS |
| ACAGTTACGGTGTCACCACC+GGG | 0.611533 | 7_4:+61484523 | Msa1168700:CDS |
| GAATTGGGGTGTGGCAGCTG+AGG | 0.617765 | 7_4:+61484287 | Msa1168700:CDS |
| TCCTGAATAACCTTGGAGGA+GGG | 0.623616 | 7_4:-61485348 | None:intergenic |
| AGAAACAAAGCTTTGCATGG+TGG | 0.624866 | 7_4:+61486022 | Msa1168700:CDS |
| CTGTTCCGTTAACAAGGGCA+AGG | 0.626189 | 7_4:-61485616 | None:intergenic |
| GACACTGACGATTTCTCAGG+TGG | 0.626830 | 7_4:+61484389 | Msa1168700:CDS |
| CCTTGATGAGGTGAAGCGTA+TGG | 0.628479 | 7_4:+61484326 | Msa1168700:CDS |
| GAAGCTGATCCTTTGAATTG+GGG | 0.639983 | 7_4:+61484273 | Msa1168700:CDS |
| GAAAGGCAGTCACCTTGATG+AGG | 0.642522 | 7_4:+61484314 | Msa1168700:CDS |
| GGAGGAGTACCGGAAGCCGG+TGG | 0.645003 | 7_4:+61484350 | Msa1168700:CDS |
| CCATACGCTTCACCTCATCA+AGG | 0.653785 | 7_4:-61484326 | None:intergenic |
| GTACCGCGAAGTGGTAAACA+TGG | 0.656453 | 7_4:-61485425 | None:intergenic |
| CACAAGTTGAAACACCACCC+TGG | 0.660975 | 7_4:+61485767 | Msa1168700:CDS |
| TGATGAGGTGAAGCGTATGG+TGG | 0.671300 | 7_4:+61484329 | Msa1168700:CDS |
| GCTGTGATTGTACCGCGAAG+TGG | 0.671902 | 7_4:-61485434 | None:intergenic |
| TCAGTGTCTCGCCACCAAGA+CGG | 0.673504 | 7_4:-61484374 | None:intergenic |
| AACAGCTGTTCCGTTAACAA+GGG | 0.686202 | 7_4:-61485621 | None:intergenic |
| GGAGAGTATGAACAAAGGCA+CGG | 0.688439 | 7_4:+61484500 | Msa1168700:CDS |
| CAGCCTCAATTTGACCAGGG+TGG | 0.690386 | 7_4:-61485781 | None:intergenic |
| ACAGCTCCACCTGCACACCA+TGG | 0.693221 | 7_4:-61484431 | None:intergenic |
| ACATGACCATGGTGTGCAGG+TGG | 0.694429 | 7_4:+61484425 | Msa1168700:CDS |
| CAGCAGCCTCAATTTGACCA+GGG | 0.707184 | 7_4:-61485784 | None:intergenic |
| GTGATGGAGAGTATGAACAA+AGG | 0.730510 | 7_4:+61484495 | Msa1168700:CDS |
| CACCGCCGTACCAAACAAGG+TGG | 0.735748 | 7_4:+61484561 | Msa1168700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTAAAGTTTAAATCAA+AGG | - | chr7_4:61484725-61484744 | None:intergenic | 10.0% |
| !! | TAATCAATACTATTAAGATA+TGG | + | chr7_4:61484161-61484180 | Msa1168700:exon | 15.0% |
| !!! | GTTTTTTTATTTTTAACGAA+AGG | - | chr7_4:61484880-61484899 | None:intergenic | 15.0% |
| !!! | ATCTATTTGTAACTTTTAAT+TGG | + | chr7_4:61484925-61484944 | Msa1168700:intron | 15.0% |
| !! | ATATATGTATTAATAGTAAG+TGG | - | chr7_4:61485024-61485043 | None:intergenic | 15.0% |
| !! | TTCCATTCTTATAAAATTCT+AGG | + | chr7_4:61484110-61484129 | Msa1168700:five_prime_UTR | 20.0% |
| !!! | TACCTAGAATTTTATAAGAA+TGG | - | chr7_4:61484115-61484134 | None:intergenic | 20.0% |
| !!! | TGATTTTATATATGAAATGC+AGG | - | chr7_4:61484771-61484790 | None:intergenic | 20.0% |
| !!! | AAATTTTATCCTTATTTTGC+TGG | + | chr7_4:61484827-61484846 | Msa1168700:intron | 20.0% |
| !!! | ACTTGTTTTTATATTAAAGC+AGG | - | chr7_4:61484986-61485005 | None:intergenic | 20.0% |
| !! | TGCTTTAATATAAAAACAAG+TGG | + | chr7_4:61484985-61485004 | Msa1168700:intron | 20.0% |
| !! | TTAATATAAAAACAAGTGGT+AGG | + | chr7_4:61484989-61485008 | Msa1168700:intron | 20.0% |
| !! | TAATATAAAAACAAGTGGTA+GGG | + | chr7_4:61484990-61485009 | Msa1168700:intron | 20.0% |
| !!! | GGTTACTTCTTTTAAAAAAT+TGG | + | chr7_4:61485145-61485164 | Msa1168700:intron | 20.0% |
| !!! | TTTACGAGTAACATTTTTTA+GGG | + | chr7_4:61485172-61485191 | Msa1168700:intron | 20.0% |
| ! | ATAGAGGTTTCTTTCTAATT+TGG | - | chr7_4:61484014-61484033 | None:intergenic | 25.0% |
| ! | GAATGGAAATTCTAATGATT+AGG | - | chr7_4:61484098-61484117 | None:intergenic | 25.0% |
| !!! | TGTACTTGCGTTTTAAATTT+AGG | + | chr7_4:61485043-61485062 | Msa1168700:intron | 25.0% |
| !!! | GTTTACGAGTAACATTTTTT+AGG | + | chr7_4:61485171-61485190 | Msa1168700:intron | 25.0% |
| !!! | TTACGAGTAACATTTTTTAG+GGG | + | chr7_4:61485173-61485192 | Msa1168700:intron | 25.0% |
| ! | AGAATACAGAAGAAAAGAAA+TGG | + | chr7_4:61485201-61485220 | Msa1168700:intron | 25.0% |
| !!! | TTTTTCAGATTTTTGAATGC+TGG | + | chr7_4:61485245-61485264 | Msa1168700:intron | 25.0% |
| !! | TTTTTGAATGCTGGAATATT+TGG | + | chr7_4:61485254-61485273 | Msa1168700:CDS | 25.0% |
| ! | TTTGAATTACAACCAAAAGA+AGG | + | chr7_4:61485593-61485612 | Msa1168700:CDS | 25.0% |
| ! | TTCTTGAAACATCAATCAAA+GGG | - | chr7_4:61486006-61486025 | None:intergenic | 25.0% |
| ! | TTTCTTGAAACATCAATCAA+AGG | - | chr7_4:61486007-61486026 | None:intergenic | 25.0% |
| !! | GTCAATGATTTTTACAACAA+TGG | + | chr7_4:61486142-61486161 | Msa1168700:CDS | 25.0% |
| ! | ATATTGTAACTCAGAACAAT+AGG | - | chr7_4:61486245-61486264 | None:intergenic | 25.0% |
| ! | AATGTCTTAAATCAATTGCT+TGG | - | chr7_4:61486414-61486433 | None:intergenic | 25.0% |
| !! | AGCAATTGATTTAAGACATT+TGG | + | chr7_4:61486414-61486433 | Msa1168700:intron | 25.0% |
| !! | AATTGATTTAAGACATTTGG+AGG | + | chr7_4:61486417-61486436 | Msa1168700:intron | 25.0% |
| !!! | TCTTTTTCACAAAATCTTGA+AGG | + | chr7_4:61486609-61486628 | Msa1168700:intron | 25.0% |
| ! | AGTAGTTAGGCTTTATATAG+AGG | - | chr7_4:61484030-61484049 | None:intergenic | 30.0% |
| !! | ATGTTCCTTTATTTGTTGTG+TGG | - | chr7_4:61484141-61484160 | None:intergenic | 30.0% |
| AATCAAGCAGAATGATTCAT+TGG | - | chr7_4:61484220-61484239 | None:intergenic | 30.0% | |
| ! | CAAACTATTTGCAACGTTTT+TGG | + | chr7_4:61484899-61484918 | Msa1168700:intron | 30.0% |
| ! | AAGAAAATGTGCAACTTGTT+AGG | + | chr7_4:61485124-61485143 | Msa1168700:intron | 30.0% |
| AATGCTGGAATATTTGGAAA+CGG | + | chr7_4:61485260-61485279 | Msa1168700:CDS | 30.0% | |
| ! | AGGAATTCGATTTGAAATCT+TGG | + | chr7_4:61485367-61485386 | Msa1168700:CDS | 30.0% |
| ! | TGCAAAAGAAGCTTTTACAT+TGG | + | chr7_4:61485550-61485569 | Msa1168700:CDS | 30.0% |
| ! | ATTTTTGCTGAAGTTATGCA+AGG | + | chr7_4:61485716-61485735 | Msa1168700:CDS | 30.0% |
| ! | TTTTTGCTGAAGTTATGCAA+GGG | + | chr7_4:61485717-61485736 | Msa1168700:CDS | 30.0% |
| ! | TGCTATTATGGAACACATTT+TGG | + | chr7_4:61485805-61485824 | Msa1168700:CDS | 30.0% |
| ! | ATTATGGAACACATTTTGGA+TGG | + | chr7_4:61485809-61485828 | Msa1168700:CDS | 30.0% |
| !! | AGTGCATATCTATCTTGTTT+TGG | - | chr7_4:61485890-61485909 | None:intergenic | 30.0% |
| AATCGAATCACTTCAATCAA+AGG | - | chr7_4:61485938-61485957 | None:intergenic | 30.0% | |
| GTTACAATATCTTGCAAATC+CGG | + | chr7_4:61486255-61486274 | Msa1168700:CDS | 30.0% | |
| !! | TGAAAAAGACTTGTTGAAAG+TGG | - | chr7_4:61486598-61486617 | Msa1168710:CDS | 30.0% |
| GAGGTTTCTTTCTAATTTGG+AGG | - | chr7_4:61484011-61484030 | None:intergenic | 35.0% | |
| GATTTGTGAAGGAAGTAGTT+AGG | - | chr7_4:61484043-61484062 | None:intergenic | 35.0% | |
| AACTACTTCCTTCACAAATC+AGG | + | chr7_4:61484043-61484062 | Msa1168700:five_prime_UTR | 35.0% | |
| ! | GTGAATTTCCTGATTTGTGA+AGG | - | chr7_4:61484054-61484073 | None:intergenic | 35.0% |
| TACCACCACACAACAAATAA+AGG | + | chr7_4:61484133-61484152 | Msa1168700:five_prime_UTR | 35.0% | |
| !! | TTCCTTTATTTGTTGTGTGG+TGG | - | chr7_4:61484138-61484157 | None:intergenic | 35.0% |
| ATGAAGCTGATCCTTTGAAT+TGG | + | chr7_4:61484271-61484290 | Msa1168700:CDS | 35.0% | |
| TGAAGCTGATCCTTTGAATT+GGG | + | chr7_4:61484272-61484291 | Msa1168700:CDS | 35.0% | |
| CTTTGCAGAAAGAACTCATA+AGG | + | chr7_4:61484586-61484605 | Msa1168700:CDS | 35.0% | |
| CATAGCAATCCAGCAAAATA+AGG | - | chr7_4:61484839-61484858 | None:intergenic | 35.0% | |
| ATCGAATTCCTGAATAACCT+TGG | - | chr7_4:61485358-61485377 | None:intergenic | 35.0% | |
| GTTGTTAAGGAGATTTGTGA+TGG | - | chr7_4:61485396-61485415 | None:intergenic | 35.0% | |
| ! | ATGGAGTAACGTTGTTGTTA+AGG | - | chr7_4:61485409-61485428 | None:intergenic | 35.0% |
| AAACCAGCAATGTATGAAAG+AGG | - | chr7_4:61485476-61485495 | None:intergenic | 35.0% | |
| !! | TACATTGCTGGTTTACTAAC+CGG | + | chr7_4:61485482-61485501 | Msa1168700:CDS | 35.0% |
| GCATTAAGTATTTCTCCAGA+TGG | - | chr7_4:61485533-61485552 | None:intergenic | 35.0% | |
| ! | AAAGAAGCTTTTACATTGGC+TGG | + | chr7_4:61485554-61485573 | Msa1168700:CDS | 35.0% |
| GAGAACAATAGAAGCTAAAC+CGG | - | chr7_4:61485651-61485670 | None:intergenic | 35.0% | |
| AGCTTCTATTGTTCTCTTTG+AGG | + | chr7_4:61485655-61485674 | Msa1168700:CDS | 35.0% | |
| !!! | TCTCTTTGAGGCTAACATTT+TGG | + | chr7_4:61485667-61485686 | Msa1168700:CDS | 35.0% |
| GTCAAATGATCGGTAAATTC+AGG | - | chr7_4:61485746-61485765 | None:intergenic | 35.0% | |
| CAACTTGTGTGTCAAATGAT+CGG | - | chr7_4:61485756-61485775 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTGGTTTCTGCAA+AGG | - | chr7_4:61485878-61485897 | None:intergenic | 35.0% |
| TCAAGAAACAAAGCTTTGCA+TGG | + | chr7_4:61486019-61486038 | Msa1168700:CDS | 35.0% | |
| AACTTTCAAGGAACACCTAT+TGG | + | chr7_4:61486046-61486065 | Msa1168700:CDS | 35.0% | |
| TTATCCATGGATACTCCAAT+AGG | - | chr7_4:61486064-61486083 | None:intergenic | 35.0% | |
| ATCCATGGATAATACACGTT+TGG | + | chr7_4:61486072-61486091 | Msa1168700:CDS | 35.0% | |
| AGAAATCCTAGCTTGGATTA+TGG | + | chr7_4:61486190-61486209 | Msa1168700:CDS | 35.0% | |
| TTGAAACCATAATCCAAGCT+AGG | - | chr7_4:61486199-61486218 | None:intergenic | 35.0% | |
| TAGCTTGGATTATGGTTTCA+AGG | + | chr7_4:61486198-61486217 | Msa1168700:CDS | 35.0% | |
| AGCTTGGATTATGGTTTCAA+GGG | + | chr7_4:61486199-61486218 | Msa1168700:CDS | 35.0% | |
| AACCAAGATGTGAACTCTTT+GGG | + | chr7_4:61486310-61486329 | Msa1168700:CDS | 35.0% | |
| !! | CTTTTTGGCAACTTGACTTA+CGG | + | chr7_4:61486665-61486684 | Msa1168700:CDS | 35.0% |
| GAAGCTGATCCTTTGAATTG+GGG | + | chr7_4:61484273-61484292 | Msa1168700:CDS | 40.0% | |
| ! | GTGATGGAGAGTATGAACAA+AGG | + | chr7_4:61484495-61484514 | Msa1168700:CDS | 40.0% |
| GAATTCCTGAATAACCTTGG+AGG | - | chr7_4:61485355-61485374 | None:intergenic | 40.0% | |
| GTTCCTCTTTCATACATTGC+TGG | + | chr7_4:61485470-61485489 | Msa1168700:CDS | 40.0% | |
| !! | AGCTTTGGAATTTGGTCTTC+CGG | - | chr7_4:61485504-61485523 | None:intergenic | 40.0% |
| AGACCAAATTCCAAAGCTCA+TGG | + | chr7_4:61485506-61485525 | Msa1168700:CDS | 40.0% | |
| AACAGCTGTTCCGTTAACAA+GGG | - | chr7_4:61485624-61485643 | None:intergenic | 40.0% | |
| AATTGAGGCTGCTGCTATTA+TGG | + | chr7_4:61485793-61485812 | Msa1168700:CDS | 40.0% | |
| CACTTAGAACTTCACCACAA+TGG | + | chr7_4:61485906-61485925 | Msa1168700:CDS | 40.0% | |
| GATCTCTCTCTCAATTGACT+TGG | - | chr7_4:61485966-61485985 | None:intergenic | 40.0% | |
| AGAAACAAAGCTTTGCATGG+TGG | + | chr7_4:61486022-61486041 | Msa1168700:CDS | 40.0% | |
| ! | TTGCATGGTGGAAACTTTCA+AGG | + | chr7_4:61486034-61486053 | Msa1168700:CDS | 40.0% |
| ! | AACACCTATTGGAGTATCCA+TGG | + | chr7_4:61486057-61486076 | Msa1168700:CDS | 40.0% |
| TGCCAAACGTGTATTATCCA+TGG | - | chr7_4:61486077-61486096 | None:intergenic | 40.0% | |
| CTACTCGCAGAAAGATTTGA+AGG | - | chr7_4:61486172-61486191 | None:intergenic | 40.0% | |
| CAACCAAGATGTGAACTCTT+TGG | + | chr7_4:61486309-61486328 | Msa1168700:CDS | 40.0% | |
| AACCCAAAGAGTTCACATCT+TGG | - | chr7_4:61486315-61486334 | None:intergenic | 40.0% | |
| TTGGCAAAGTGCAATCAAGA+AGG | - | chr7_4:61486395-61486414 | None:intergenic | 40.0% | |
| CTTGTTGAAAGTGGTTGACA+GGG | - | chr7_4:61486589-61486608 | Msa1168710:CDS | 40.0% | |
| ! | ACTTGTTGAAAGTGGTTGAC+AGG | - | chr7_4:61486590-61486609 | Msa1168710:CDS | 40.0% |
| !! | AAGTTCTCCATTGACTCCTA+TGG | + | chr7_4:61486635-61486654 | Msa1168700:CDS | 40.0% |
| !! | TCCATTGACTCCTATGGTAA+GGG | + | chr7_4:61486641-61486660 | Msa1168700:CDS | 40.0% |
| ! | TCCTATGGTAAGGGTCTTTT+TGG | + | chr7_4:61486650-61486669 | Msa1168700:CDS | 40.0% |
| TGATCCTTTGAATTGGGGTG+TGG | + | chr7_4:61484278-61484297 | Msa1168700:CDS | 45.0% | |
| ATCTGCTAGGGATGGAGTTA+AGG | + | chr7_4:61484458-61484477 | Msa1168700:CDS | 45.0% | |
| ! | GGAGAGTATGAACAAAGGCA+CGG | + | chr7_4:61484500-61484519 | Msa1168700:CDS | 45.0% |
| ! | AACAAAGGCACGGACAGTTA+CGG | + | chr7_4:61484510-61484529 | Msa1168700:CDS | 45.0% |
| ! | AAGCACCACCTTGTTTGGTA+CGG | - | chr7_4:61484569-61484588 | None:intergenic | 45.0% |
| TCCTGAATAACCTTGGAGGA+GGG | - | chr7_4:61485351-61485370 | None:intergenic | 45.0% | |
| TTCCTGAATAACCTTGGAGG+AGG | - | chr7_4:61485352-61485371 | None:intergenic | 45.0% | |
| ACTCCATGTTTACCACTTCG+CGG | + | chr7_4:61485422-61485441 | Msa1168700:CDS | 45.0% | |
| !! | GGTCCATGAGCTTTGGAATT+TGG | - | chr7_4:61485512-61485531 | None:intergenic | 45.0% |
| CAACAGCTGTTCCGTTAACA+AGG | - | chr7_4:61485625-61485644 | None:intergenic | 45.0% | |
| CTTGTTAACGGAACAGCTGT+TGG | + | chr7_4:61485623-61485642 | Msa1168700:CDS | 45.0% | |
| AGAACTTCACCACAATGGCT+TGG | + | chr7_4:61485911-61485930 | Msa1168700:CDS | 45.0% | |
| ATCAAAGGACCAAGCCATTG+TGG | - | chr7_4:61485923-61485942 | None:intergenic | 45.0% | |
| TGCGAGTAGAAATCCTAGCT+TGG | + | chr7_4:61486183-61486202 | Msa1168700:CDS | 45.0% | |
| CTCAGAACAATAGGAAGCCA+TGG | - | chr7_4:61486236-61486255 | None:intergenic | 45.0% | |
| CATGAGCTGAAGGATCTCAA+TGG | - | chr7_4:61486365-61486384 | None:intergenic | 45.0% | |
| GCAAAGTGCAATCAAGAAGG+TGG | - | chr7_4:61486392-61486411 | None:intergenic | 45.0% | |
| !! | CTCCATTGACTCCTATGGTA+AGG | + | chr7_4:61486640-61486659 | Msa1168700:CDS | 45.0% |
| ACCCTTACCATAGGAGTCAA+TGG | - | chr7_4:61486645-61486664 | Msa1168710:CDS | 45.0% | |
| GCCAAAAAGACCCTTACCAT+AGG | - | chr7_4:61486654-61486673 | Msa1168710:CDS | 45.0% | |
| GAAAGGCAGTCACCTTGATG+AGG | + | chr7_4:61484314-61484333 | Msa1168700:CDS | 50.0% | |
| CCATACGCTTCACCTCATCA+AGG | - | chr7_4:61484329-61484348 | None:intergenic | 50.0% | |
| CCTTGATGAGGTGAAGCGTA+TGG | + | chr7_4:61484326-61484345 | Msa1168700:CDS | 50.0% | |
| TGATGAGGTGAAGCGTATGG+TGG | + | chr7_4:61484329-61484348 | Msa1168700:CDS | 50.0% | |
| CGAGACACTGACGATTTCTC+AGG | + | chr7_4:61484386-61484405 | Msa1168700:CDS | 50.0% | |
| GACACTGACGATTTCTCAGG+TGG | + | chr7_4:61484389-61484408 | Msa1168700:CDS | 50.0% | |
| ACCATGGTCATGTGCAGCAA+TGG | - | chr7_4:61484418-61484437 | None:intergenic | 50.0% | |
| TGGAGCTGTCTGAATCTGCT+AGG | + | chr7_4:61484445-61484464 | Msa1168700:CDS | 50.0% | |
| GGAGCTGTCTGAATCTGCTA+GGG | + | chr7_4:61484446-61484465 | Msa1168700:CDS | 50.0% | |
| CTGTCTGAATCTGCTAGGGA+TGG | + | chr7_4:61484450-61484469 | Msa1168700:CDS | 50.0% | |
| AGTTAAGGCCAGCAGTGACT+GGG | + | chr7_4:61484473-61484492 | Msa1168700:CDS | 50.0% | |
| ! | CTGCAAAGCACCACCTTGTT+TGG | - | chr7_4:61484574-61484593 | None:intergenic | 50.0% |
| ! | TTGCTGTGTGTGGAAGTGTG+TGG | - | chr7_4:61485298-61485317 | None:intergenic | 50.0% |
| AGAATCAACACCCTCCTCCA+AGG | + | chr7_4:61485338-61485357 | Msa1168700:CDS | 50.0% | |
| ACCCTCCTCCAAGGTTATTC+AGG | + | chr7_4:61485347-61485366 | Msa1168700:CDS | 50.0% | |
| GTACCGCGAAGTGGTAAACA+TGG | - | chr7_4:61485428-61485447 | None:intergenic | 50.0% | |
| TCCAAAGCTCATGGACCATC+TGG | + | chr7_4:61485515-61485534 | Msa1168700:CDS | 50.0% | |
| TCCAGATGGTCCATGAGCTT+TGG | - | chr7_4:61485519-61485538 | None:intergenic | 50.0% | |
| ! | ACAAGGGCAAGGCCTTCTTT+TGG | - | chr7_4:61485608-61485627 | None:intergenic | 50.0% |
| GAAGGCCTTGCCCTTGTTAA+CGG | + | chr7_4:61485611-61485630 | Msa1168700:CDS | 50.0% | |
| CTGTTCCGTTAACAAGGGCA+AGG | - | chr7_4:61485619-61485638 | None:intergenic | 50.0% | |
| !! | AACGGAACAGCTGTTGGTTC+CGG | + | chr7_4:61485629-61485648 | Msa1168700:CDS | 50.0% |
| ! | CACAAGTTGAAACACCACCC+TGG | + | chr7_4:61485767-61485786 | Msa1168700:CDS | 50.0% |
| ACACCACCCTGGTCAAATTG+AGG | + | chr7_4:61485778-61485797 | Msa1168700:CDS | 50.0% | |
| CAGCAGCCTCAATTTGACCA+GGG | - | chr7_4:61485787-61485806 | None:intergenic | 50.0% | |
| CAAGGGAGCTGAAATTGCCA+TGG | + | chr7_4:61486216-61486235 | Msa1168700:CDS | 50.0% | |
| ! | CTTTGGACGTGGGTTGTAAC+CGG | - | chr7_4:61486277-61486296 | None:intergenic | 50.0% |
| TTGCTCAGCACTTTGGACGT+GGG | - | chr7_4:61486287-61486306 | None:intergenic | 50.0% | |
| ! | GGTTGTGTTGCTCAGCACTT+TGG | - | chr7_4:61486294-61486313 | None:intergenic | 50.0% |
| AGGTGGAAGACATGAGCTGA+AGG | - | chr7_4:61486375-61486394 | None:intergenic | 50.0% | |
| GCTGCCACACCCCAATTCAA+AGG | - | chr7_4:61484285-61484304 | None:intergenic | 55.0% | |
| GTGGCAGCTGAGGCAATGAA+AGG | + | chr7_4:61484297-61484316 | Msa1168700:CDS | 55.0% | |
| TGAGGTGAAGCGTATGGTGG+AGG | + | chr7_4:61484332-61484351 | Msa1168700:CDS | 55.0% | |
| ! | AGCGTATGGTGGAGGAGTAC+CGG | + | chr7_4:61484340-61484359 | Msa1168700:CDS | 55.0% |
| TCAGTGTCTCGCCACCAAGA+CGG | - | chr7_4:61484377-61484396 | None:intergenic | 55.0% | |
| GCCATTGCTGCACATGACCA+TGG | + | chr7_4:61484414-61484433 | Msa1168700:CDS | 55.0% | |
| TGCACATGACCATGGTGTGC+AGG | + | chr7_4:61484422-61484441 | Msa1168700:CDS | 55.0% | |
| ACATGACCATGGTGTGCAGG+TGG | + | chr7_4:61484425-61484444 | Msa1168700:CDS | 55.0% | |
| GAGTTAAGGCCAGCAGTGAC+TGG | + | chr7_4:61484472-61484491 | Msa1168700:CDS | 55.0% | |
| !! | GACAGTTACGGTGTCACCAC+CGG | + | chr7_4:61484522-61484541 | Msa1168700:CDS | 55.0% |
| !! | ACAGTTACGGTGTCACCACC+GGG | + | chr7_4:61484523-61484542 | Msa1168700:CDS | 55.0% |
| ! | CACCACCTTGTTTGGTACGG+CGG | - | chr7_4:61484566-61484585 | None:intergenic | 55.0% |
| GCAGCTCTTGTTGCTGTGTG+TGG | - | chr7_4:61485308-61485327 | None:intergenic | 55.0% | |
| GCTGTGATTGTACCGCGAAG+TGG | - | chr7_4:61485437-61485456 | None:intergenic | 55.0% | |
| CGCGGTACAATCACAGCTTC+AGG | + | chr7_4:61485440-61485459 | Msa1168700:CDS | 55.0% | |
| CAGCCTCAATTTGACCAGGG+TGG | - | chr7_4:61485784-61485803 | None:intergenic | 55.0% | |
| GCAGCAGCCTCAATTTGACC+AGG | - | chr7_4:61485788-61485807 | None:intergenic | 55.0% | |
| ! | CGTTTGGCACTCGCATCGAT+TGG | + | chr7_4:61486088-61486107 | Msa1168700:CDS | 55.0% |
| GTTGCTCAGCACTTTGGACG+TGG | - | chr7_4:61486288-61486307 | None:intergenic | 55.0% | |
| GAATTGGGGTGTGGCAGCTG+AGG | + | chr7_4:61484287-61484306 | Msa1168700:CDS | 60.0% | |
| ACAGCTCCACCTGCACACCA+TGG | - | chr7_4:61484434-61484453 | None:intergenic | 60.0% | |
| CTCCATCACCCAGTCACTGC+TGG | - | chr7_4:61484484-61484503 | None:intergenic | 60.0% | |
| !! | TACGGTGTCACCACCGGGTT+CGG | + | chr7_4:61484528-61484547 | Msa1168700:CDS | 60.0% |
| TTGTTTGGTACGGCGGTGCG+AGG | - | chr7_4:61484559-61484578 | None:intergenic | 60.0% | |
| TCGCACCGCCGTACCAAACA+AGG | + | chr7_4:61484558-61484577 | Msa1168700:CDS | 60.0% | |
| CACCGCCGTACCAAACAAGG+TGG | + | chr7_4:61484561-61484580 | Msa1168700:CDS | 60.0% | |
| !! | GGTGGAGGAGTACCGGAAGC+CGG | + | chr7_4:61484347-61484366 | Msa1168700:CDS | 65.0% |
| !! | CAAGACGGACCACCGGCTTC+CGG | - | chr7_4:61484362-61484381 | None:intergenic | 65.0% |
| AAGCCGGTGGTCCGTCTTGG+TGG | + | chr7_4:61484363-61484382 | Msa1168700:CDS | 65.0% | |
| TCGCCACCAAGACGGACCAC+CGG | - | chr7_4:61484369-61484388 | None:intergenic | 65.0% | |
| GGCCAGCAGTGACTGGGTGA+TGG | + | chr7_4:61484479-61484498 | Msa1168700:CDS | 65.0% | |
| TTTGGTACGGCGGTGCGAGG+TGG | - | chr7_4:61484556-61484575 | None:intergenic | 65.0% | |
| !! | GGAGGAGTACCGGAAGCCGG+TGG | + | chr7_4:61484350-61484369 | Msa1168700:CDS | 70.0% |
| CGGAAGCCGGTGGTCCGTCT+TGG | + | chr7_4:61484360-61484379 | Msa1168700:CDS | 70.0% | |
| ! | GTGCGAGGTGGCGCCGAACC+CGG | - | chr7_4:61484544-61484563 | None:intergenic | 75.0% |
| !! | CGAGGTGGCGCCGAACCCGG+TGG | - | chr7_4:61484541-61484560 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 61483969 | 61486700 | 61483969 | ID=Msa1168700;Name=Msa1168700 |
| chr7_4 | mRNA | 61483969 | 61486700 | 61483969 | ID=Msa1168700-mRNA-1;Parent=Msa1168700;Name=Msa1168700-mRNA-1;_AED=0.06;_eAED=0.06;_QI=211|0.5|0.33|0.66|0.5|0.33|3|0|542 |
| chr7_4 | exon | 61483969 | 61484607 | 61483969 | ID=Msa1168700-mRNA-1:exon:19418;Parent=Msa1168700-mRNA-1 |
| chr7_4 | exon | 61485253 | 61486383 | 61485253 | ID=Msa1168700-mRNA-1:exon:19419;Parent=Msa1168700-mRNA-1 |
| chr7_4 | exon | 61486631 | 61486700 | 61486631 | ID=Msa1168700-mRNA-1:exon:19420;Parent=Msa1168700-mRNA-1 |
| chr7_4 | five_prime_UTR | 61483969 | 61484179 | 61483969 | ID=Msa1168700-mRNA-1:five_prime_utr;Parent=Msa1168700-mRNA-1 |
| chr7_4 | CDS | 61484180 | 61484607 | 61484180 | ID=Msa1168700-mRNA-1:cds;Parent=Msa1168700-mRNA-1 |
| chr7_4 | CDS | 61485253 | 61486383 | 61485253 | ID=Msa1168700-mRNA-1:cds;Parent=Msa1168700-mRNA-1 |
| chr7_4 | CDS | 61486631 | 61486700 | 61486631 | ID=Msa1168700-mRNA-1:cds;Parent=Msa1168700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
