Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079360 | XP_013449990.2 | 96.380 | 442 | 14 | 2 | 1 | 442 | 1 | 440 | 0.0 | 868 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079360 | sp|P27990|PALY_MEDSA | 94.796 | 442 | 22 | 1 | 1 | 442 | 1 | 441 | 0.0 | 857 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079360 | A0A396H6R9 | 96.380 | 442 | 14 | 2 | 1 | 442 | 1 | 440 | 0.0 | 868 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1079360 | Msa1079390 | 0.897827 | 9.639574e-77 | -8.615850e-47 |
| Msa1079360 | Msa1079400 | 0.864287 | 1.355158e-64 | -8.615850e-47 |
| Msa1079360 | Msa1079410 | 0.809035 | 2.308788e-50 | -8.615850e-47 |
| Msa1079360 | Msa1123600 | 0.894008 | 3.692542e-75 | -8.615850e-47 |
| Msa1079360 | Msa1123610 | 0.855446 | 6.275647e-62 | -8.615850e-47 |
| Msa1079360 | Msa1168520 | 0.836884 | 7.203799e-57 | -8.615850e-47 |
| Msa1079360 | Msa1168530 | 0.814463 | 1.521053e-51 | -8.615850e-47 |
| Msa1079360 | Msa1168540 | 0.849374 | 3.369172e-60 | -8.615850e-47 |
| Msa1079360 | Msa1168610 | 0.804982 | 1.663167e-49 | -8.615850e-47 |
| Msa1079360 | Msa1168620 | 0.868759 | 5.143864e-66 | -8.615850e-47 |
| Msa1079360 | Msa1168700 | 0.848761 | 4.989056e-60 | -8.615850e-47 |
| Msa1079360 | Msa1168710 | 0.864281 | 1.361304e-64 | -8.615850e-47 |
| Msa0259650 | Msa1079360 | 0.800700 | 1.274571e-48 | -8.615850e-47 |
| Msa0341500 | Msa1079360 | 0.835334 | 1.783122e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079360 | MtrunA17_Chr7g0264311 | 96.380 | 442 | 14 | 2 | 1 | 442 | 1 | 440 | 0.0 | 868 |
| Msa1079360 | MtrunA17_Chr7g0264341 | 95.928 | 442 | 16 | 2 | 1 | 442 | 1 | 440 | 0.0 | 865 |
| Msa1079360 | MtrunA17_Chr7g0264351 | 95.701 | 442 | 17 | 2 | 1 | 442 | 1 | 440 | 0.0 | 863 |
| Msa1079360 | MtrunA17_Chr1g0181091 | 87.126 | 435 | 46 | 2 | 8 | 442 | 4 | 428 | 0.0 | 775 |
| Msa1079360 | MtrunA17_Chr1g0199551 | 78.960 | 423 | 88 | 1 | 20 | 442 | 17 | 438 | 0.0 | 697 |
| Msa1079360 | MtrunA17_Chr2g0326921 | 79.064 | 406 | 82 | 2 | 28 | 432 | 1 | 404 | 0.0 | 653 |
| Msa1079360 | MtrunA17_Chr5g0448361 | 74.057 | 424 | 107 | 3 | 20 | 442 | 4 | 425 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079360 | AT2G37040.1 | 82.933 | 416 | 70 | 1 | 27 | 442 | 27 | 441 | 0.0 | 719 |
| Msa1079360 | AT3G53260.1 | 82.927 | 410 | 69 | 1 | 33 | 442 | 25 | 433 | 0.0 | 706 |
| Msa1079360 | AT3G10340.1 | 81.517 | 422 | 75 | 3 | 22 | 442 | 4 | 423 | 0.0 | 699 |
| Msa1079360 | AT5G04230.1 | 78.935 | 413 | 80 | 4 | 33 | 442 | 12 | 420 | 0.0 | 658 |
| Msa1079360 | AT5G04230.2 | 78.177 | 417 | 80 | 5 | 33 | 442 | 12 | 424 | 0.0 | 652 |
Find 123 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGAGGTTTCTTTCTAATT+TGG | 0.138990 | 7_2:-78457312 | None:intergenic |
| TGCTATTATGGAACACATTT+TGG | 0.178379 | 7_2:+78459106 | Msa1079360:CDS |
| TCTCTTTGAGGCTAACATTT+TGG | 0.190344 | 7_2:+78458968 | Msa1079360:CDS |
| GGTCCATGAGCTTTGGAATT+TGG | 0.199307 | 7_2:-78458810 | None:intergenic |
| TTCCATTCTTATAAAATTCT+AGG | 0.206360 | 7_2:+78457411 | Msa1079360:five_prime_UTR |
| AATTGAGGCTGCTGCTATTA+TGG | 0.231999 | 7_2:+78459094 | Msa1079360:CDS |
| CACACTGCTCCAAGGTTATT+CGG | 0.232317 | 7_2:+78458647 | Msa1079360:CDS |
| AGTGCATATCTATCTTGTTT+TGG | 0.270938 | 7_2:-78459188 | None:intergenic |
| CTGCAAAGCACCACCTTGTT+TGG | 0.301759 | 7_2:-78457872 | None:intergenic |
| GTTCCTCTTTCATACATTGC+TGG | 0.323630 | 7_2:+78458771 | Msa1079360:CDS |
| AACTTTCAAGGAACACCTAT+TGG | 0.329701 | 7_2:+78459347 | Msa1079360:CDS |
| CAAGACGGACCACCGGTTTC+CGG | 0.332096 | 7_2:-78457660 | None:intergenic |
| AGCTTTGGAATTTGGTCTTC+CGG | 0.346211 | 7_2:-78458802 | None:intergenic |
| AACGGAACAGCTGTTGGTTC+CGG | 0.347424 | 7_2:+78458930 | Msa1079360:CDS |
| AGTAGTTAGGCTTTATATAG+AGG | 0.352906 | 7_2:-78457328 | None:intergenic |
| TCCAGATGGTCCATGAGCTT+TGG | 0.356557 | 7_2:-78458817 | None:intergenic |
| ATGGAGTAACGTTGTTGTTA+AGG | 0.365275 | 7_2:-78458707 | None:intergenic |
| AGCTTCTATTGTTCTCTTTG+AGG | 0.369188 | 7_2:+78458956 | Msa1079360:CDS |
| GGGAATTAGATTTGAAATCT+TGG | 0.372469 | 7_2:+78458668 | Msa1079360:CDS |
| TACCACCACACAACAAATAA+AGG | 0.386653 | 7_2:+78457434 | Msa1079360:five_prime_UTR |
| GAAGGCCTTGCCCTTGTTAA+CGG | 0.392707 | 7_2:+78458912 | Msa1079360:CDS |
| GAGTTAAGGCCAGCAGTGAC+TGG | 0.396808 | 7_2:+78457773 | Msa1079360:CDS |
| TCCAAAGCTCATGGACCATC+TGG | 0.398114 | 7_2:+78458816 | Msa1079360:CDS |
| AACTACTTCCTTCACAAATC+AGG | 0.398972 | 7_2:+78457344 | Msa1079360:five_prime_UTR |
| ATGAAGCTGATCCTTTGAAT+TGG | 0.399923 | 7_2:+78457572 | Msa1079360:CDS |
| TACGGTGTCACCACCGGGTT+CGG | 0.400782 | 7_2:+78457829 | Msa1079360:CDS |
| GATTTGTGAAGGAAGTAGTT+AGG | 0.403389 | 7_2:-78457341 | None:intergenic |
| TACATTGCTGGTTTACTAAC+CGG | 0.404088 | 7_2:+78458783 | Msa1079360:CDS |
| CGCGGTACAATCACAGCTTC+AGG | 0.409342 | 7_2:+78458741 | Msa1079360:CDS |
| TGAAGCTGATCCTTTGAATT+GGG | 0.415897 | 7_2:+78457573 | Msa1079360:CDS |
| AATCAAGCAGAATGATTCAT+TGG | 0.416820 | 7_2:-78457518 | None:intergenic |
| TAATCAATACTATTAAGATA+TGG | 0.423342 | 7_2:+78457462 | Msa1079360:exon |
| GAATGGAAATTCTAATGATT+AGG | 0.425172 | 7_2:-78457396 | None:intergenic |
| ATCTGCTAGGGATGGAGTTA+AGG | 0.427510 | 7_2:+78457759 | Msa1079360:CDS |
| GTCAAATGATCGGTAAATTC+AGG | 0.429420 | 7_2:-78459044 | None:intergenic |
| ACAAGGGCAAGGCCTTCTTT+TGG | 0.433813 | 7_2:-78458906 | None:intergenic |
| GAGGTTTCTTTCTAATTTGG+AGG | 0.442189 | 7_2:-78457309 | None:intergenic |
| GAGAACAATAGAAGCTAAAC+CGG | 0.444891 | 7_2:-78458949 | None:intergenic |
| TTGCATGGTGGAAACTTTCA+AGG | 0.445309 | 7_2:+78459335 | Msa1079360:CDS |
| ATCCATGGATAATACACGTT+TGG | 0.447022 | 7_2:+78459373 | Msa1079360:CDS |
| CTCCATCACCCAGTCACTGC+TGG | 0.457530 | 7_2:-78457782 | None:intergenic |
| GTGTGAGGTGGCGCCGAACC+CGG | 0.460603 | 7_2:-78457842 | None:intergenic |
| TTCTTGAAACATCAATCAAA+GGG | 0.465561 | 7_2:-78459304 | None:intergenic |
| TTATCCATGGATACTCCAAT+AGG | 0.467287 | 7_2:-78459362 | None:intergenic |
| TTTGAATTACAACCAAAAGA+AGG | 0.473227 | 7_2:+78458894 | Msa1079360:CDS |
| TTTCTTGAAACATCAATCAA+AGG | 0.480962 | 7_2:-78459305 | None:intergenic |
| ACACTGCTCCAAGGTTATTC+GGG | 0.483941 | 7_2:+78458648 | Msa1079360:CDS |
| AAACCGGTGGTCCGTCTTGG+TGG | 0.488016 | 7_2:+78457664 | Msa1079360:CDS |
| GACAGTTACGGTGTCACCAC+CGG | 0.492715 | 7_2:+78457823 | Msa1079360:CDS |
| AATGCTGGAATATTTGGAAA+CGG | 0.493618 | 7_2:+78458561 | Msa1079360:CDS |
| ATCTAATTCCCGAATAACCT+TGG | 0.497406 | 7_2:-78458656 | None:intergenic |
| CGAGACACTGACGATTTCTC+AGG | 0.498607 | 7_2:+78457687 | Msa1079360:CDS |
| TGCACATGACCATGGTGTGC+AGG | 0.506601 | 7_2:+78457723 | Msa1079360:CDS |
| CTTTGCAGAAAGAACTCATA+AGG | 0.510191 | 7_2:+78457887 | Msa1079360:CDS |
| AGCGTATGGTGGAGGAGTAC+CGG | 0.511195 | 7_2:+78457641 | Msa1079360:CDS |
| CAACAGCTGTTCCGTTAACA+AGG | 0.515867 | 7_2:-78458923 | None:intergenic |
| GGTGGAGGAGTACCGGAAAC+CGG | 0.516068 | 7_2:+78457648 | Msa1079360:CDS |
| AACAAAGGCACGGACAGTTA+CGG | 0.520670 | 7_2:+78457811 | Msa1079360:CDS |
| TTCCTTTATTTGTTGTGTGG+TGG | 0.524448 | 7_2:-78457436 | None:intergenic |
| CTTGTTAACGGAACAGCTGT+TGG | 0.526260 | 7_2:+78458924 | Msa1079360:CDS |
| GCAGCTCTTGTTGCTGTGTG+TGG | 0.526517 | 7_2:-78458606 | None:intergenic |
| GCATTAAGTATTTCTCCAGA+TGG | 0.528134 | 7_2:-78458831 | None:intergenic |
| AAACCAGCAATGTATGAAAG+AGG | 0.530089 | 7_2:-78458774 | None:intergenic |
| CGTTTGGCTCTCGCATCGAT+TGG | 0.530657 | 7_2:+78459389 | Msa1079360:CDS |
| TGGAGCTGTCTGAATCTGCT+AGG | 0.530940 | 7_2:+78457746 | Msa1079360:CDS |
| CAACTTGTGTGTCAAATGAT+CGG | 0.535020 | 7_2:-78459054 | None:intergenic |
| AACACCTATTGGAGTATCCA+TGG | 0.535388 | 7_2:+78459358 | Msa1079360:CDS |
| AGCCAAACGTGTATTATCCA+TGG | 0.537118 | 7_2:-78459375 | None:intergenic |
| AGACCAAATTCCAAAGCTCA+TGG | 0.537132 | 7_2:+78458807 | Msa1079360:CDS |
| GGCCAGCAGTGACTGGGTGA+TGG | 0.539190 | 7_2:+78457780 | Msa1079360:CDS |
| ACCATGGTCATGTGCAGCAA+TGG | 0.541335 | 7_2:-78457716 | None:intergenic |
| AGAACTTCACCACAATGGCT+TGG | 0.541972 | 7_2:+78459212 | Msa1079360:CDS |
| AATCGAATCACTTCAATCAA+AGG | 0.551824 | 7_2:-78459236 | None:intergenic |
| ATGTTCCTTTATTTGTTGTG+TGG | 0.553831 | 7_2:-78457439 | None:intergenic |
| ACTCCATGTTTACCACTTCG+CGG | 0.558758 | 7_2:+78458723 | Msa1079360:CDS |
| GATCTCTCTCTCAATTGACT+TGG | 0.558820 | 7_2:-78459264 | None:intergenic |
| TCAAGAAACAAAGCTTTGCA+TGG | 0.562486 | 7_2:+78459320 | Msa1079360:CDS |
| AAGCACCACCTTGTTTGGTA+CGG | 0.564097 | 7_2:-78457867 | None:intergenic |
| CTGTCTGAATCTGCTAGGGA+TGG | 0.567492 | 7_2:+78457751 | Msa1079360:CDS |
| GTTGTTAAGGAGATTTGTGA+TGG | 0.568421 | 7_2:-78458694 | None:intergenic |
| ACACCACCCTGGTCAAATTG+AGG | 0.572511 | 7_2:+78459079 | Msa1079360:CDS |
| GCAGCAGCCTCAATTTGACC+AGG | 0.576243 | 7_2:-78459086 | None:intergenic |
| GCTGCCACACCCCAATTCAA+AGG | 0.581598 | 7_2:-78457583 | None:intergenic |
| TGAGGTGAAGCGTATGGTGG+AGG | 0.584737 | 7_2:+78457633 | Msa1079360:CDS |
| ATCAAAGGACCAAGCCATTG+TGG | 0.585110 | 7_2:-78459221 | None:intergenic |
| GCCATTGCTGCACATGACCA+TGG | 0.585263 | 7_2:+78457715 | Msa1079360:CDS |
| TGATCCTTTGAATTGGGGTG+TGG | 0.587095 | 7_2:+78457579 | Msa1079360:CDS |
| TCACACCGCCGTACCAAACA+AGG | 0.592067 | 7_2:+78457859 | Msa1079360:CDS |
| TCGCCACCAAGACGGACCAC+CGG | 0.592776 | 7_2:-78457667 | None:intergenic |
| GTGGCAGCTGAGGCAATGAA+AGG | 0.593497 | 7_2:+78457598 | Msa1079360:CDS |
| AGTTAAGGCCAGCAGTGACT+GGG | 0.595378 | 7_2:+78457774 | Msa1079360:CDS |
| CACCACCTTGTTTGGTACGG+CGG | 0.598168 | 7_2:-78457864 | None:intergenic |
| GTGAATTTCCTGATTTGTGA+AGG | 0.598768 | 7_2:-78457352 | None:intergenic |
| TTGCTGTGTGTGGAAGTGTG+TGG | 0.602528 | 7_2:-78458596 | None:intergenic |
| CACTTAGAACTTCACCACAA+TGG | 0.606171 | 7_2:+78459207 | Msa1079360:CDS |
| GGAGCTGTCTGAATCTGCTA+GGG | 0.606450 | 7_2:+78457747 | Msa1079360:CDS |
| ACAGTTACGGTGTCACCACC+GGG | 0.611533 | 7_2:+78457824 | Msa1079360:CDS |
| GAATTGGGGTGTGGCAGCTG+AGG | 0.617765 | 7_2:+78457588 | Msa1079360:CDS |
| TTTGGTACGGCGGTGTGAGG+TGG | 0.622134 | 7_2:-78457854 | None:intergenic |
| AGAAACAAAGCTTTGCATGG+TGG | 0.624866 | 7_2:+78459323 | Msa1079360:CDS |
| CTGTTCCGTTAACAAGGGCA+AGG | 0.626189 | 7_2:-78458917 | None:intergenic |
| GACACTGACGATTTCTCAGG+TGG | 0.626830 | 7_2:+78457690 | Msa1079360:CDS |
| CCTTGATGAGGTGAAGCGTA+TGG | 0.628479 | 7_2:+78457627 | Msa1079360:CDS |
| AGAATCAACACACTGCTCCA+AGG | 0.635657 | 7_2:+78458639 | Msa1079360:CDS |
| GAAGCTGATCCTTTGAATTG+GGG | 0.639983 | 7_2:+78457574 | Msa1079360:CDS |
| GAAAGGCAGTCACCTTGATG+AGG | 0.642522 | 7_2:+78457615 | Msa1079360:CDS |
| TTGTTTGGTACGGCGGTGTG+AGG | 0.643517 | 7_2:-78457857 | None:intergenic |
| CCATACGCTTCACCTCATCA+AGG | 0.653785 | 7_2:-78457627 | None:intergenic |
| GTACCGCGAAGTGGTAAACA+TGG | 0.656453 | 7_2:-78458726 | None:intergenic |
| CACAAGTTGAAACACCACCC+TGG | 0.660975 | 7_2:+78459068 | Msa1079360:CDS |
| TGATGAGGTGAAGCGTATGG+TGG | 0.671300 | 7_2:+78457630 | Msa1079360:CDS |
| GCTGTGATTGTACCGCGAAG+TGG | 0.671902 | 7_2:-78458735 | None:intergenic |
| TCAGTGTCTCGCCACCAAGA+CGG | 0.673504 | 7_2:-78457675 | None:intergenic |
| AACAGCTGTTCCGTTAACAA+GGG | 0.686202 | 7_2:-78458922 | None:intergenic |
| GGAGAGTATGAACAAAGGCA+CGG | 0.688439 | 7_2:+78457801 | Msa1079360:CDS |
| CAGCCTCAATTTGACCAGGG+TGG | 0.690386 | 7_2:-78459082 | None:intergenic |
| GGAGGAGTACCGGAAACCGG+TGG | 0.692417 | 7_2:+78457651 | Msa1079360:CDS |
| ACAGCTCCACCTGCACACCA+TGG | 0.693221 | 7_2:-78457732 | None:intergenic |
| ACATGACCATGGTGTGCAGG+TGG | 0.694429 | 7_2:+78457726 | Msa1079360:CDS |
| TGAGGTGGCGCCGAACCCGG+TGG | 0.700925 | 7_2:-78457839 | None:intergenic |
| CAGCAGCCTCAATTTGACCA+GGG | 0.707184 | 7_2:-78459085 | None:intergenic |
| GTGATGGAGAGTATGAACAA+AGG | 0.730510 | 7_2:+78457796 | Msa1079360:CDS |
| CACCGCCGTACCAAACAAGG+TGG | 0.739310 | 7_2:+78457862 | Msa1079360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTAAAGTTTAAATCAA+AGG | - | chr7_2:78458027-78458046 | None:intergenic | 10.0% |
| !!! | TAATTTAAAGTTTAAATCAA+AGG | - | chr7_2:78458027-78458046 | None:intergenic | 10.0% |
| !! | TAATCAATACTATTAAGATA+TGG | + | chr7_2:78457462-78457481 | Msa1079360:exon | 15.0% |
| !!! | GTTTTTTTATTTTTAACGAA+AGG | - | chr7_2:78458182-78458201 | None:intergenic | 15.0% |
| !!! | ATCTATTTGTAACTTTTAAT+TGG | + | chr7_2:78458227-78458246 | Msa1079360:intron | 15.0% |
| !!! | ACTTGTTTTTATATTAAAGT+AGG | - | chr7_2:78458288-78458307 | None:intergenic | 15.0% |
| !! | TACTTTAATATAAAAACAAG+TGG | + | chr7_2:78458287-78458306 | Msa1079360:intron | 15.0% |
| !! | ATATATGTATTAATAGTAAG+TGG | - | chr7_2:78458326-78458345 | None:intergenic | 15.0% |
| !!! | TTTACAAGTAACATTTTTTA+GGG | + | chr7_2:78458473-78458492 | Msa1079360:intron | 15.0% |
| !! | TAATCAATACTATTAAGATA+TGG | + | chr7_2:78457462-78457481 | Msa1079360:exon | 15.0% |
| !!! | GTTTTTTTATTTTTAACGAA+AGG | - | chr7_2:78458182-78458201 | None:intergenic | 15.0% |
| !!! | ATCTATTTGTAACTTTTAAT+TGG | + | chr7_2:78458227-78458246 | Msa1079360:intron | 15.0% |
| !!! | ACTTGTTTTTATATTAAAGT+AGG | - | chr7_2:78458288-78458307 | None:intergenic | 15.0% |
| !! | TACTTTAATATAAAAACAAG+TGG | + | chr7_2:78458287-78458306 | Msa1079360:intron | 15.0% |
| !! | ATATATGTATTAATAGTAAG+TGG | - | chr7_2:78458326-78458345 | None:intergenic | 15.0% |
| !!! | TTTACAAGTAACATTTTTTA+GGG | + | chr7_2:78458473-78458492 | Msa1079360:intron | 15.0% |
| !! | TTCCATTCTTATAAAATTCT+AGG | + | chr7_2:78457411-78457430 | Msa1079360:five_prime_UTR | 20.0% |
| !!! | TACCTAGAATTTTATAAGAA+TGG | - | chr7_2:78457416-78457435 | None:intergenic | 20.0% |
| !!! | TGATTTTATATATGAAATGC+AGG | - | chr7_2:78458073-78458092 | None:intergenic | 20.0% |
| !!! | AAATTTTATCCTTATTTTGC+TGG | + | chr7_2:78458129-78458148 | Msa1079360:intron | 20.0% |
| !! | TTAATATAAAAACAAGTGGT+AGG | + | chr7_2:78458291-78458310 | Msa1079360:intron | 20.0% |
| !! | TAATATAAAAACAAGTGGTA+GGG | + | chr7_2:78458292-78458311 | Msa1079360:intron | 20.0% |
| !!! | GGTTACTTCTTTTAAAAAAT+TGG | + | chr7_2:78458446-78458465 | Msa1079360:intron | 20.0% |
| !!! | GTTTACAAGTAACATTTTTT+AGG | + | chr7_2:78458472-78458491 | Msa1079360:intron | 20.0% |
| !!! | TTACAAGTAACATTTTTTAG+GGG | + | chr7_2:78458474-78458493 | Msa1079360:intron | 20.0% |
| !! | TTCCATTCTTATAAAATTCT+AGG | + | chr7_2:78457411-78457430 | Msa1079360:five_prime_UTR | 20.0% |
| !!! | TACCTAGAATTTTATAAGAA+TGG | - | chr7_2:78457416-78457435 | None:intergenic | 20.0% |
| !!! | TGATTTTATATATGAAATGC+AGG | - | chr7_2:78458073-78458092 | None:intergenic | 20.0% |
| !!! | AAATTTTATCCTTATTTTGC+TGG | + | chr7_2:78458129-78458148 | Msa1079360:intron | 20.0% |
| !! | TTAATATAAAAACAAGTGGT+AGG | + | chr7_2:78458291-78458310 | Msa1079360:intron | 20.0% |
| !! | TAATATAAAAACAAGTGGTA+GGG | + | chr7_2:78458292-78458311 | Msa1079360:intron | 20.0% |
| !!! | GGTTACTTCTTTTAAAAAAT+TGG | + | chr7_2:78458446-78458465 | Msa1079360:intron | 20.0% |
| !!! | GTTTACAAGTAACATTTTTT+AGG | + | chr7_2:78458472-78458491 | Msa1079360:intron | 20.0% |
| !!! | TTACAAGTAACATTTTTTAG+GGG | + | chr7_2:78458474-78458493 | Msa1079360:intron | 20.0% |
| ! | ATAGAGGTTTCTTTCTAATT+TGG | - | chr7_2:78457315-78457334 | None:intergenic | 25.0% |
| ! | GAATGGAAATTCTAATGATT+AGG | - | chr7_2:78457399-78457418 | None:intergenic | 25.0% |
| !!! | TGTACTTGCGTTTTAAATTT+AGG | + | chr7_2:78458345-78458364 | Msa1079360:intron | 25.0% |
| ! | AGAATACAGAAGAAAAGAAA+TGG | + | chr7_2:78458502-78458521 | Msa1079360:intron | 25.0% |
| !!! | TTTTTCAGATTTTTGAATGC+TGG | + | chr7_2:78458546-78458565 | Msa1079360:intron | 25.0% |
| !! | TTTTTGAATGCTGGAATATT+TGG | + | chr7_2:78458555-78458574 | Msa1079360:CDS | 25.0% |
| ! | TTTGAATTACAACCAAAAGA+AGG | + | chr7_2:78458894-78458913 | Msa1079360:CDS | 25.0% |
| ! | TTCTTGAAACATCAATCAAA+GGG | - | chr7_2:78459307-78459326 | None:intergenic | 25.0% |
| ! | TTTCTTGAAACATCAATCAA+AGG | - | chr7_2:78459308-78459327 | None:intergenic | 25.0% |
| ! | ATAGAGGTTTCTTTCTAATT+TGG | - | chr7_2:78457315-78457334 | None:intergenic | 25.0% |
| ! | GAATGGAAATTCTAATGATT+AGG | - | chr7_2:78457399-78457418 | None:intergenic | 25.0% |
| !!! | TGTACTTGCGTTTTAAATTT+AGG | + | chr7_2:78458345-78458364 | Msa1079360:intron | 25.0% |
| ! | AGAATACAGAAGAAAAGAAA+TGG | + | chr7_2:78458502-78458521 | Msa1079360:intron | 25.0% |
| !!! | TTTTTCAGATTTTTGAATGC+TGG | + | chr7_2:78458546-78458565 | Msa1079360:intron | 25.0% |
| !! | TTTTTGAATGCTGGAATATT+TGG | + | chr7_2:78458555-78458574 | Msa1079360:CDS | 25.0% |
| ! | TTTGAATTACAACCAAAAGA+AGG | + | chr7_2:78458894-78458913 | Msa1079360:CDS | 25.0% |
| ! | TTCTTGAAACATCAATCAAA+GGG | - | chr7_2:78459307-78459326 | None:intergenic | 25.0% |
| ! | TTTCTTGAAACATCAATCAA+AGG | - | chr7_2:78459308-78459327 | None:intergenic | 25.0% |
| ! | AGTAGTTAGGCTTTATATAG+AGG | - | chr7_2:78457331-78457350 | None:intergenic | 30.0% |
| !! | ATGTTCCTTTATTTGTTGTG+TGG | - | chr7_2:78457442-78457461 | None:intergenic | 30.0% |
| AATCAAGCAGAATGATTCAT+TGG | - | chr7_2:78457521-78457540 | None:intergenic | 30.0% | |
| ! | CAAACTATTTGCAACGTTTT+TGG | + | chr7_2:78458201-78458220 | Msa1079360:intron | 30.0% |
| ! | AAGAAAATGTGCAACTTGTT+AGG | + | chr7_2:78458425-78458444 | Msa1079360:intron | 30.0% |
| AATGCTGGAATATTTGGAAA+CGG | + | chr7_2:78458561-78458580 | Msa1079360:CDS | 30.0% | |
| ! | GGGAATTAGATTTGAAATCT+TGG | + | chr7_2:78458668-78458687 | Msa1079360:CDS | 30.0% |
| ! | TGCAAAAGAAGCTTTTACAT+TGG | + | chr7_2:78458851-78458870 | Msa1079360:CDS | 30.0% |
| ! | ATTTTTGCTGAAGTTATGCA+AGG | + | chr7_2:78459017-78459036 | Msa1079360:CDS | 30.0% |
| ! | TTTTTGCTGAAGTTATGCAA+GGG | + | chr7_2:78459018-78459037 | Msa1079360:CDS | 30.0% |
| ! | TGCTATTATGGAACACATTT+TGG | + | chr7_2:78459106-78459125 | Msa1079360:CDS | 30.0% |
| ! | ATTATGGAACACATTTTGGA+TGG | + | chr7_2:78459110-78459129 | Msa1079360:CDS | 30.0% |
| !! | AGTGCATATCTATCTTGTTT+TGG | - | chr7_2:78459191-78459210 | None:intergenic | 30.0% |
| AATCGAATCACTTCAATCAA+AGG | - | chr7_2:78459239-78459258 | None:intergenic | 30.0% | |
| ! | AGTAGTTAGGCTTTATATAG+AGG | - | chr7_2:78457331-78457350 | None:intergenic | 30.0% |
| !! | ATGTTCCTTTATTTGTTGTG+TGG | - | chr7_2:78457442-78457461 | None:intergenic | 30.0% |
| AATCAAGCAGAATGATTCAT+TGG | - | chr7_2:78457521-78457540 | None:intergenic | 30.0% | |
| ! | CAAACTATTTGCAACGTTTT+TGG | + | chr7_2:78458201-78458220 | Msa1079360:intron | 30.0% |
| ! | AAGAAAATGTGCAACTTGTT+AGG | + | chr7_2:78458425-78458444 | Msa1079360:intron | 30.0% |
| AATGCTGGAATATTTGGAAA+CGG | + | chr7_2:78458561-78458580 | Msa1079360:CDS | 30.0% | |
| ! | GGGAATTAGATTTGAAATCT+TGG | + | chr7_2:78458668-78458687 | Msa1079360:CDS | 30.0% |
| ! | TGCAAAAGAAGCTTTTACAT+TGG | + | chr7_2:78458851-78458870 | Msa1079360:CDS | 30.0% |
| ! | ATTTTTGCTGAAGTTATGCA+AGG | + | chr7_2:78459017-78459036 | Msa1079360:CDS | 30.0% |
| ! | TTTTTGCTGAAGTTATGCAA+GGG | + | chr7_2:78459018-78459037 | Msa1079360:CDS | 30.0% |
| ! | TGCTATTATGGAACACATTT+TGG | + | chr7_2:78459106-78459125 | Msa1079360:CDS | 30.0% |
| ! | ATTATGGAACACATTTTGGA+TGG | + | chr7_2:78459110-78459129 | Msa1079360:CDS | 30.0% |
| !! | AGTGCATATCTATCTTGTTT+TGG | - | chr7_2:78459191-78459210 | None:intergenic | 30.0% |
| AATCGAATCACTTCAATCAA+AGG | - | chr7_2:78459239-78459258 | None:intergenic | 30.0% | |
| GAGGTTTCTTTCTAATTTGG+AGG | - | chr7_2:78457312-78457331 | None:intergenic | 35.0% | |
| GATTTGTGAAGGAAGTAGTT+AGG | - | chr7_2:78457344-78457363 | None:intergenic | 35.0% | |
| AACTACTTCCTTCACAAATC+AGG | + | chr7_2:78457344-78457363 | Msa1079360:five_prime_UTR | 35.0% | |
| ! | GTGAATTTCCTGATTTGTGA+AGG | - | chr7_2:78457355-78457374 | None:intergenic | 35.0% |
| TACCACCACACAACAAATAA+AGG | + | chr7_2:78457434-78457453 | Msa1079360:five_prime_UTR | 35.0% | |
| !! | TTCCTTTATTTGTTGTGTGG+TGG | - | chr7_2:78457439-78457458 | None:intergenic | 35.0% |
| ATGAAGCTGATCCTTTGAAT+TGG | + | chr7_2:78457572-78457591 | Msa1079360:CDS | 35.0% | |
| TGAAGCTGATCCTTTGAATT+GGG | + | chr7_2:78457573-78457592 | Msa1079360:CDS | 35.0% | |
| CTTTGCAGAAAGAACTCATA+AGG | + | chr7_2:78457887-78457906 | Msa1079360:CDS | 35.0% | |
| CATAGCAATCCAGCAAAATA+AGG | - | chr7_2:78458141-78458160 | None:intergenic | 35.0% | |
| ATCTAATTCCCGAATAACCT+TGG | - | chr7_2:78458659-78458678 | None:intergenic | 35.0% | |
| GTTGTTAAGGAGATTTGTGA+TGG | - | chr7_2:78458697-78458716 | None:intergenic | 35.0% | |
| ! | ATGGAGTAACGTTGTTGTTA+AGG | - | chr7_2:78458710-78458729 | None:intergenic | 35.0% |
| AAACCAGCAATGTATGAAAG+AGG | - | chr7_2:78458777-78458796 | None:intergenic | 35.0% | |
| !! | TACATTGCTGGTTTACTAAC+CGG | + | chr7_2:78458783-78458802 | Msa1079360:CDS | 35.0% |
| GCATTAAGTATTTCTCCAGA+TGG | - | chr7_2:78458834-78458853 | None:intergenic | 35.0% | |
| ! | AAAGAAGCTTTTACATTGGC+TGG | + | chr7_2:78458855-78458874 | Msa1079360:CDS | 35.0% |
| GAGAACAATAGAAGCTAAAC+CGG | - | chr7_2:78458952-78458971 | None:intergenic | 35.0% | |
| AGCTTCTATTGTTCTCTTTG+AGG | + | chr7_2:78458956-78458975 | Msa1079360:CDS | 35.0% | |
| !!! | TCTCTTTGAGGCTAACATTT+TGG | + | chr7_2:78458968-78458987 | Msa1079360:CDS | 35.0% |
| GTCAAATGATCGGTAAATTC+AGG | - | chr7_2:78459047-78459066 | None:intergenic | 35.0% | |
| CAACTTGTGTGTCAAATGAT+CGG | - | chr7_2:78459057-78459076 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTGGTTTCTGCAA+AGG | - | chr7_2:78459179-78459198 | None:intergenic | 35.0% |
| TCAAGAAACAAAGCTTTGCA+TGG | + | chr7_2:78459320-78459339 | Msa1079360:CDS | 35.0% | |
| AACTTTCAAGGAACACCTAT+TGG | + | chr7_2:78459347-78459366 | Msa1079360:CDS | 35.0% | |
| TTATCCATGGATACTCCAAT+AGG | - | chr7_2:78459365-78459384 | None:intergenic | 35.0% | |
| ATCCATGGATAATACACGTT+TGG | + | chr7_2:78459373-78459392 | Msa1079360:CDS | 35.0% | |
| GAGGTTTCTTTCTAATTTGG+AGG | - | chr7_2:78457312-78457331 | None:intergenic | 35.0% | |
| GATTTGTGAAGGAAGTAGTT+AGG | - | chr7_2:78457344-78457363 | None:intergenic | 35.0% | |
| AACTACTTCCTTCACAAATC+AGG | + | chr7_2:78457344-78457363 | Msa1079360:five_prime_UTR | 35.0% | |
| ! | GTGAATTTCCTGATTTGTGA+AGG | - | chr7_2:78457355-78457374 | None:intergenic | 35.0% |
| TACCACCACACAACAAATAA+AGG | + | chr7_2:78457434-78457453 | Msa1079360:five_prime_UTR | 35.0% | |
| !! | TTCCTTTATTTGTTGTGTGG+TGG | - | chr7_2:78457439-78457458 | None:intergenic | 35.0% |
| ATGAAGCTGATCCTTTGAAT+TGG | + | chr7_2:78457572-78457591 | Msa1079360:CDS | 35.0% | |
| TGAAGCTGATCCTTTGAATT+GGG | + | chr7_2:78457573-78457592 | Msa1079360:CDS | 35.0% | |
| CTTTGCAGAAAGAACTCATA+AGG | + | chr7_2:78457887-78457906 | Msa1079360:CDS | 35.0% | |
| CATAGCAATCCAGCAAAATA+AGG | - | chr7_2:78458141-78458160 | None:intergenic | 35.0% | |
| ATCTAATTCCCGAATAACCT+TGG | - | chr7_2:78458659-78458678 | None:intergenic | 35.0% | |
| GTTGTTAAGGAGATTTGTGA+TGG | - | chr7_2:78458697-78458716 | None:intergenic | 35.0% | |
| ! | ATGGAGTAACGTTGTTGTTA+AGG | - | chr7_2:78458710-78458729 | None:intergenic | 35.0% |
| AAACCAGCAATGTATGAAAG+AGG | - | chr7_2:78458777-78458796 | None:intergenic | 35.0% | |
| !! | TACATTGCTGGTTTACTAAC+CGG | + | chr7_2:78458783-78458802 | Msa1079360:CDS | 35.0% |
| GCATTAAGTATTTCTCCAGA+TGG | - | chr7_2:78458834-78458853 | None:intergenic | 35.0% | |
| ! | AAAGAAGCTTTTACATTGGC+TGG | + | chr7_2:78458855-78458874 | Msa1079360:CDS | 35.0% |
| GAGAACAATAGAAGCTAAAC+CGG | - | chr7_2:78458952-78458971 | None:intergenic | 35.0% | |
| AGCTTCTATTGTTCTCTTTG+AGG | + | chr7_2:78458956-78458975 | Msa1079360:CDS | 35.0% | |
| !!! | TCTCTTTGAGGCTAACATTT+TGG | + | chr7_2:78458968-78458987 | Msa1079360:CDS | 35.0% |
| GTCAAATGATCGGTAAATTC+AGG | - | chr7_2:78459047-78459066 | None:intergenic | 35.0% | |
| CAACTTGTGTGTCAAATGAT+CGG | - | chr7_2:78459057-78459076 | None:intergenic | 35.0% | |
| !!! | TCTTGTTTTGGTTTCTGCAA+AGG | - | chr7_2:78459179-78459198 | None:intergenic | 35.0% |
| TCAAGAAACAAAGCTTTGCA+TGG | + | chr7_2:78459320-78459339 | Msa1079360:CDS | 35.0% | |
| AACTTTCAAGGAACACCTAT+TGG | + | chr7_2:78459347-78459366 | Msa1079360:CDS | 35.0% | |
| TTATCCATGGATACTCCAAT+AGG | - | chr7_2:78459365-78459384 | None:intergenic | 35.0% | |
| ATCCATGGATAATACACGTT+TGG | + | chr7_2:78459373-78459392 | Msa1079360:CDS | 35.0% | |
| GAAGCTGATCCTTTGAATTG+GGG | + | chr7_2:78457574-78457593 | Msa1079360:CDS | 40.0% | |
| ! | GTGATGGAGAGTATGAACAA+AGG | + | chr7_2:78457796-78457815 | Msa1079360:CDS | 40.0% |
| GTTCCTCTTTCATACATTGC+TGG | + | chr7_2:78458771-78458790 | Msa1079360:CDS | 40.0% | |
| !! | AGCTTTGGAATTTGGTCTTC+CGG | - | chr7_2:78458805-78458824 | None:intergenic | 40.0% |
| AGACCAAATTCCAAAGCTCA+TGG | + | chr7_2:78458807-78458826 | Msa1079360:CDS | 40.0% | |
| AACAGCTGTTCCGTTAACAA+GGG | - | chr7_2:78458925-78458944 | None:intergenic | 40.0% | |
| AATTGAGGCTGCTGCTATTA+TGG | + | chr7_2:78459094-78459113 | Msa1079360:CDS | 40.0% | |
| CACTTAGAACTTCACCACAA+TGG | + | chr7_2:78459207-78459226 | Msa1079360:CDS | 40.0% | |
| GATCTCTCTCTCAATTGACT+TGG | - | chr7_2:78459267-78459286 | None:intergenic | 40.0% | |
| AGAAACAAAGCTTTGCATGG+TGG | + | chr7_2:78459323-78459342 | Msa1079360:CDS | 40.0% | |
| ! | TTGCATGGTGGAAACTTTCA+AGG | + | chr7_2:78459335-78459354 | Msa1079360:CDS | 40.0% |
| ! | AACACCTATTGGAGTATCCA+TGG | + | chr7_2:78459358-78459377 | Msa1079360:CDS | 40.0% |
| AGCCAAACGTGTATTATCCA+TGG | - | chr7_2:78459378-78459397 | None:intergenic | 40.0% | |
| GAAGCTGATCCTTTGAATTG+GGG | + | chr7_2:78457574-78457593 | Msa1079360:CDS | 40.0% | |
| ! | GTGATGGAGAGTATGAACAA+AGG | + | chr7_2:78457796-78457815 | Msa1079360:CDS | 40.0% |
| GTTCCTCTTTCATACATTGC+TGG | + | chr7_2:78458771-78458790 | Msa1079360:CDS | 40.0% | |
| !! | AGCTTTGGAATTTGGTCTTC+CGG | - | chr7_2:78458805-78458824 | None:intergenic | 40.0% |
| AGACCAAATTCCAAAGCTCA+TGG | + | chr7_2:78458807-78458826 | Msa1079360:CDS | 40.0% | |
| AACAGCTGTTCCGTTAACAA+GGG | - | chr7_2:78458925-78458944 | None:intergenic | 40.0% | |
| AATTGAGGCTGCTGCTATTA+TGG | + | chr7_2:78459094-78459113 | Msa1079360:CDS | 40.0% | |
| CACTTAGAACTTCACCACAA+TGG | + | chr7_2:78459207-78459226 | Msa1079360:CDS | 40.0% | |
| GATCTCTCTCTCAATTGACT+TGG | - | chr7_2:78459267-78459286 | None:intergenic | 40.0% | |
| AGAAACAAAGCTTTGCATGG+TGG | + | chr7_2:78459323-78459342 | Msa1079360:CDS | 40.0% | |
| ! | TTGCATGGTGGAAACTTTCA+AGG | + | chr7_2:78459335-78459354 | Msa1079360:CDS | 40.0% |
| ! | AACACCTATTGGAGTATCCA+TGG | + | chr7_2:78459358-78459377 | Msa1079360:CDS | 40.0% |
| AGCCAAACGTGTATTATCCA+TGG | - | chr7_2:78459378-78459397 | None:intergenic | 40.0% | |
| TGATCCTTTGAATTGGGGTG+TGG | + | chr7_2:78457579-78457598 | Msa1079360:CDS | 45.0% | |
| ATCTGCTAGGGATGGAGTTA+AGG | + | chr7_2:78457759-78457778 | Msa1079360:CDS | 45.0% | |
| ! | GGAGAGTATGAACAAAGGCA+CGG | + | chr7_2:78457801-78457820 | Msa1079360:CDS | 45.0% |
| ! | AACAAAGGCACGGACAGTTA+CGG | + | chr7_2:78457811-78457830 | Msa1079360:CDS | 45.0% |
| ! | AAGCACCACCTTGTTTGGTA+CGG | - | chr7_2:78457870-78457889 | None:intergenic | 45.0% |
| AGAATCAACACACTGCTCCA+AGG | + | chr7_2:78458639-78458658 | Msa1079360:CDS | 45.0% | |
| CACACTGCTCCAAGGTTATT+CGG | + | chr7_2:78458647-78458666 | Msa1079360:CDS | 45.0% | |
| ACACTGCTCCAAGGTTATTC+GGG | + | chr7_2:78458648-78458667 | Msa1079360:CDS | 45.0% | |
| ACTCCATGTTTACCACTTCG+CGG | + | chr7_2:78458723-78458742 | Msa1079360:CDS | 45.0% | |
| !! | GGTCCATGAGCTTTGGAATT+TGG | - | chr7_2:78458813-78458832 | None:intergenic | 45.0% |
| CAACAGCTGTTCCGTTAACA+AGG | - | chr7_2:78458926-78458945 | None:intergenic | 45.0% | |
| CTTGTTAACGGAACAGCTGT+TGG | + | chr7_2:78458924-78458943 | Msa1079360:CDS | 45.0% | |
| AGAACTTCACCACAATGGCT+TGG | + | chr7_2:78459212-78459231 | Msa1079360:CDS | 45.0% | |
| ATCAAAGGACCAAGCCATTG+TGG | - | chr7_2:78459224-78459243 | None:intergenic | 45.0% | |
| TGATCCTTTGAATTGGGGTG+TGG | + | chr7_2:78457579-78457598 | Msa1079360:CDS | 45.0% | |
| ATCTGCTAGGGATGGAGTTA+AGG | + | chr7_2:78457759-78457778 | Msa1079360:CDS | 45.0% | |
| ! | GGAGAGTATGAACAAAGGCA+CGG | + | chr7_2:78457801-78457820 | Msa1079360:CDS | 45.0% |
| ! | AACAAAGGCACGGACAGTTA+CGG | + | chr7_2:78457811-78457830 | Msa1079360:CDS | 45.0% |
| ! | AAGCACCACCTTGTTTGGTA+CGG | - | chr7_2:78457870-78457889 | None:intergenic | 45.0% |
| AGAATCAACACACTGCTCCA+AGG | + | chr7_2:78458639-78458658 | Msa1079360:CDS | 45.0% | |
| CACACTGCTCCAAGGTTATT+CGG | + | chr7_2:78458647-78458666 | Msa1079360:CDS | 45.0% | |
| ACACTGCTCCAAGGTTATTC+GGG | + | chr7_2:78458648-78458667 | Msa1079360:CDS | 45.0% | |
| ACTCCATGTTTACCACTTCG+CGG | + | chr7_2:78458723-78458742 | Msa1079360:CDS | 45.0% | |
| !! | GGTCCATGAGCTTTGGAATT+TGG | - | chr7_2:78458813-78458832 | None:intergenic | 45.0% |
| CAACAGCTGTTCCGTTAACA+AGG | - | chr7_2:78458926-78458945 | None:intergenic | 45.0% | |
| CTTGTTAACGGAACAGCTGT+TGG | + | chr7_2:78458924-78458943 | Msa1079360:CDS | 45.0% | |
| AGAACTTCACCACAATGGCT+TGG | + | chr7_2:78459212-78459231 | Msa1079360:CDS | 45.0% | |
| ATCAAAGGACCAAGCCATTG+TGG | - | chr7_2:78459224-78459243 | None:intergenic | 45.0% | |
| GAAAGGCAGTCACCTTGATG+AGG | + | chr7_2:78457615-78457634 | Msa1079360:CDS | 50.0% | |
| CCATACGCTTCACCTCATCA+AGG | - | chr7_2:78457630-78457649 | None:intergenic | 50.0% | |
| CCTTGATGAGGTGAAGCGTA+TGG | + | chr7_2:78457627-78457646 | Msa1079360:CDS | 50.0% | |
| TGATGAGGTGAAGCGTATGG+TGG | + | chr7_2:78457630-78457649 | Msa1079360:CDS | 50.0% | |
| CGAGACACTGACGATTTCTC+AGG | + | chr7_2:78457687-78457706 | Msa1079360:CDS | 50.0% | |
| GACACTGACGATTTCTCAGG+TGG | + | chr7_2:78457690-78457709 | Msa1079360:CDS | 50.0% | |
| ACCATGGTCATGTGCAGCAA+TGG | - | chr7_2:78457719-78457738 | None:intergenic | 50.0% | |
| TGGAGCTGTCTGAATCTGCT+AGG | + | chr7_2:78457746-78457765 | Msa1079360:CDS | 50.0% | |
| GGAGCTGTCTGAATCTGCTA+GGG | + | chr7_2:78457747-78457766 | Msa1079360:CDS | 50.0% | |
| CTGTCTGAATCTGCTAGGGA+TGG | + | chr7_2:78457751-78457770 | Msa1079360:CDS | 50.0% | |
| AGTTAAGGCCAGCAGTGACT+GGG | + | chr7_2:78457774-78457793 | Msa1079360:CDS | 50.0% | |
| ! | CTGCAAAGCACCACCTTGTT+TGG | - | chr7_2:78457875-78457894 | None:intergenic | 50.0% |
| ! | TTGCTGTGTGTGGAAGTGTG+TGG | - | chr7_2:78458599-78458618 | None:intergenic | 50.0% |
| GTACCGCGAAGTGGTAAACA+TGG | - | chr7_2:78458729-78458748 | None:intergenic | 50.0% | |
| TCCAAAGCTCATGGACCATC+TGG | + | chr7_2:78458816-78458835 | Msa1079360:CDS | 50.0% | |
| TCCAGATGGTCCATGAGCTT+TGG | - | chr7_2:78458820-78458839 | None:intergenic | 50.0% | |
| ! | ACAAGGGCAAGGCCTTCTTT+TGG | - | chr7_2:78458909-78458928 | None:intergenic | 50.0% |
| GAAGGCCTTGCCCTTGTTAA+CGG | + | chr7_2:78458912-78458931 | Msa1079360:CDS | 50.0% | |
| CTGTTCCGTTAACAAGGGCA+AGG | - | chr7_2:78458920-78458939 | None:intergenic | 50.0% | |
| !! | AACGGAACAGCTGTTGGTTC+CGG | + | chr7_2:78458930-78458949 | Msa1079360:CDS | 50.0% |
| ! | CACAAGTTGAAACACCACCC+TGG | + | chr7_2:78459068-78459087 | Msa1079360:CDS | 50.0% |
| ACACCACCCTGGTCAAATTG+AGG | + | chr7_2:78459079-78459098 | Msa1079360:CDS | 50.0% | |
| CAGCAGCCTCAATTTGACCA+GGG | - | chr7_2:78459088-78459107 | None:intergenic | 50.0% | |
| GAAAGGCAGTCACCTTGATG+AGG | + | chr7_2:78457615-78457634 | Msa1079360:CDS | 50.0% | |
| CCATACGCTTCACCTCATCA+AGG | - | chr7_2:78457630-78457649 | None:intergenic | 50.0% | |
| CCTTGATGAGGTGAAGCGTA+TGG | + | chr7_2:78457627-78457646 | Msa1079360:CDS | 50.0% | |
| TGATGAGGTGAAGCGTATGG+TGG | + | chr7_2:78457630-78457649 | Msa1079360:CDS | 50.0% | |
| CGAGACACTGACGATTTCTC+AGG | + | chr7_2:78457687-78457706 | Msa1079360:CDS | 50.0% | |
| GACACTGACGATTTCTCAGG+TGG | + | chr7_2:78457690-78457709 | Msa1079360:CDS | 50.0% | |
| ACCATGGTCATGTGCAGCAA+TGG | - | chr7_2:78457719-78457738 | None:intergenic | 50.0% | |
| TGGAGCTGTCTGAATCTGCT+AGG | + | chr7_2:78457746-78457765 | Msa1079360:CDS | 50.0% | |
| GGAGCTGTCTGAATCTGCTA+GGG | + | chr7_2:78457747-78457766 | Msa1079360:CDS | 50.0% | |
| CTGTCTGAATCTGCTAGGGA+TGG | + | chr7_2:78457751-78457770 | Msa1079360:CDS | 50.0% | |
| AGTTAAGGCCAGCAGTGACT+GGG | + | chr7_2:78457774-78457793 | Msa1079360:CDS | 50.0% | |
| ! | CTGCAAAGCACCACCTTGTT+TGG | - | chr7_2:78457875-78457894 | None:intergenic | 50.0% |
| ! | TTGCTGTGTGTGGAAGTGTG+TGG | - | chr7_2:78458599-78458618 | None:intergenic | 50.0% |
| GTACCGCGAAGTGGTAAACA+TGG | - | chr7_2:78458729-78458748 | None:intergenic | 50.0% | |
| TCCAAAGCTCATGGACCATC+TGG | + | chr7_2:78458816-78458835 | Msa1079360:CDS | 50.0% | |
| TCCAGATGGTCCATGAGCTT+TGG | - | chr7_2:78458820-78458839 | None:intergenic | 50.0% | |
| ! | ACAAGGGCAAGGCCTTCTTT+TGG | - | chr7_2:78458909-78458928 | None:intergenic | 50.0% |
| GAAGGCCTTGCCCTTGTTAA+CGG | + | chr7_2:78458912-78458931 | Msa1079360:CDS | 50.0% | |
| CTGTTCCGTTAACAAGGGCA+AGG | - | chr7_2:78458920-78458939 | None:intergenic | 50.0% | |
| !! | AACGGAACAGCTGTTGGTTC+CGG | + | chr7_2:78458930-78458949 | Msa1079360:CDS | 50.0% |
| ! | CACAAGTTGAAACACCACCC+TGG | + | chr7_2:78459068-78459087 | Msa1079360:CDS | 50.0% |
| ACACCACCCTGGTCAAATTG+AGG | + | chr7_2:78459079-78459098 | Msa1079360:CDS | 50.0% | |
| CAGCAGCCTCAATTTGACCA+GGG | - | chr7_2:78459088-78459107 | None:intergenic | 50.0% | |
| GCTGCCACACCCCAATTCAA+AGG | - | chr7_2:78457586-78457605 | None:intergenic | 55.0% | |
| GTGGCAGCTGAGGCAATGAA+AGG | + | chr7_2:78457598-78457617 | Msa1079360:CDS | 55.0% | |
| TGAGGTGAAGCGTATGGTGG+AGG | + | chr7_2:78457633-78457652 | Msa1079360:CDS | 55.0% | |
| ! | AGCGTATGGTGGAGGAGTAC+CGG | + | chr7_2:78457641-78457660 | Msa1079360:CDS | 55.0% |
| TCAGTGTCTCGCCACCAAGA+CGG | - | chr7_2:78457678-78457697 | None:intergenic | 55.0% | |
| GCCATTGCTGCACATGACCA+TGG | + | chr7_2:78457715-78457734 | Msa1079360:CDS | 55.0% | |
| TGCACATGACCATGGTGTGC+AGG | + | chr7_2:78457723-78457742 | Msa1079360:CDS | 55.0% | |
| ACATGACCATGGTGTGCAGG+TGG | + | chr7_2:78457726-78457745 | Msa1079360:CDS | 55.0% | |
| GAGTTAAGGCCAGCAGTGAC+TGG | + | chr7_2:78457773-78457792 | Msa1079360:CDS | 55.0% | |
| !! | GACAGTTACGGTGTCACCAC+CGG | + | chr7_2:78457823-78457842 | Msa1079360:CDS | 55.0% |
| !! | ACAGTTACGGTGTCACCACC+GGG | + | chr7_2:78457824-78457843 | Msa1079360:CDS | 55.0% |
| TTGTTTGGTACGGCGGTGTG+AGG | - | chr7_2:78457860-78457879 | None:intergenic | 55.0% | |
| TCACACCGCCGTACCAAACA+AGG | + | chr7_2:78457859-78457878 | Msa1079360:CDS | 55.0% | |
| ! | CACCACCTTGTTTGGTACGG+CGG | - | chr7_2:78457867-78457886 | None:intergenic | 55.0% |
| GCAGCTCTTGTTGCTGTGTG+TGG | - | chr7_2:78458609-78458628 | None:intergenic | 55.0% | |
| GCTGTGATTGTACCGCGAAG+TGG | - | chr7_2:78458738-78458757 | None:intergenic | 55.0% | |
| CGCGGTACAATCACAGCTTC+AGG | + | chr7_2:78458741-78458760 | Msa1079360:CDS | 55.0% | |
| CAGCCTCAATTTGACCAGGG+TGG | - | chr7_2:78459085-78459104 | None:intergenic | 55.0% | |
| GCAGCAGCCTCAATTTGACC+AGG | - | chr7_2:78459089-78459108 | None:intergenic | 55.0% | |
| !! | CGTTTGGCTCTCGCATCGAT+TGG | + | chr7_2:78459389-78459408 | Msa1079360:CDS | 55.0% |
| GCTGCCACACCCCAATTCAA+AGG | - | chr7_2:78457586-78457605 | None:intergenic | 55.0% | |
| GTGGCAGCTGAGGCAATGAA+AGG | + | chr7_2:78457598-78457617 | Msa1079360:CDS | 55.0% | |
| TGAGGTGAAGCGTATGGTGG+AGG | + | chr7_2:78457633-78457652 | Msa1079360:CDS | 55.0% | |
| ! | AGCGTATGGTGGAGGAGTAC+CGG | + | chr7_2:78457641-78457660 | Msa1079360:CDS | 55.0% |
| TCAGTGTCTCGCCACCAAGA+CGG | - | chr7_2:78457678-78457697 | None:intergenic | 55.0% | |
| GCCATTGCTGCACATGACCA+TGG | + | chr7_2:78457715-78457734 | Msa1079360:CDS | 55.0% | |
| TGCACATGACCATGGTGTGC+AGG | + | chr7_2:78457723-78457742 | Msa1079360:CDS | 55.0% | |
| ACATGACCATGGTGTGCAGG+TGG | + | chr7_2:78457726-78457745 | Msa1079360:CDS | 55.0% | |
| GAGTTAAGGCCAGCAGTGAC+TGG | + | chr7_2:78457773-78457792 | Msa1079360:CDS | 55.0% | |
| !! | GACAGTTACGGTGTCACCAC+CGG | + | chr7_2:78457823-78457842 | Msa1079360:CDS | 55.0% |
| !! | ACAGTTACGGTGTCACCACC+GGG | + | chr7_2:78457824-78457843 | Msa1079360:CDS | 55.0% |
| TTGTTTGGTACGGCGGTGTG+AGG | - | chr7_2:78457860-78457879 | None:intergenic | 55.0% | |
| TCACACCGCCGTACCAAACA+AGG | + | chr7_2:78457859-78457878 | Msa1079360:CDS | 55.0% | |
| ! | CACCACCTTGTTTGGTACGG+CGG | - | chr7_2:78457867-78457886 | None:intergenic | 55.0% |
| GCAGCTCTTGTTGCTGTGTG+TGG | - | chr7_2:78458609-78458628 | None:intergenic | 55.0% | |
| GCTGTGATTGTACCGCGAAG+TGG | - | chr7_2:78458738-78458757 | None:intergenic | 55.0% | |
| CGCGGTACAATCACAGCTTC+AGG | + | chr7_2:78458741-78458760 | Msa1079360:CDS | 55.0% | |
| CAGCCTCAATTTGACCAGGG+TGG | - | chr7_2:78459085-78459104 | None:intergenic | 55.0% | |
| GCAGCAGCCTCAATTTGACC+AGG | - | chr7_2:78459089-78459108 | None:intergenic | 55.0% | |
| !! | CGTTTGGCTCTCGCATCGAT+TGG | + | chr7_2:78459389-78459408 | Msa1079360:CDS | 55.0% |
| GAATTGGGGTGTGGCAGCTG+AGG | + | chr7_2:78457588-78457607 | Msa1079360:CDS | 60.0% | |
| !! | GGTGGAGGAGTACCGGAAAC+CGG | + | chr7_2:78457648-78457667 | Msa1079360:CDS | 60.0% |
| !! | CAAGACGGACCACCGGTTTC+CGG | - | chr7_2:78457663-78457682 | None:intergenic | 60.0% |
| AAACCGGTGGTCCGTCTTGG+TGG | + | chr7_2:78457664-78457683 | Msa1079360:CDS | 60.0% | |
| ACAGCTCCACCTGCACACCA+TGG | - | chr7_2:78457735-78457754 | None:intergenic | 60.0% | |
| CTCCATCACCCAGTCACTGC+TGG | - | chr7_2:78457785-78457804 | None:intergenic | 60.0% | |
| !! | TACGGTGTCACCACCGGGTT+CGG | + | chr7_2:78457829-78457848 | Msa1079360:CDS | 60.0% |
| TTTGGTACGGCGGTGTGAGG+TGG | - | chr7_2:78457857-78457876 | None:intergenic | 60.0% | |
| CACCGCCGTACCAAACAAGG+TGG | + | chr7_2:78457862-78457881 | Msa1079360:CDS | 60.0% | |
| GAATTGGGGTGTGGCAGCTG+AGG | + | chr7_2:78457588-78457607 | Msa1079360:CDS | 60.0% | |
| !! | GGTGGAGGAGTACCGGAAAC+CGG | + | chr7_2:78457648-78457667 | Msa1079360:CDS | 60.0% |
| !! | CAAGACGGACCACCGGTTTC+CGG | - | chr7_2:78457663-78457682 | None:intergenic | 60.0% |
| AAACCGGTGGTCCGTCTTGG+TGG | + | chr7_2:78457664-78457683 | Msa1079360:CDS | 60.0% | |
| ACAGCTCCACCTGCACACCA+TGG | - | chr7_2:78457735-78457754 | None:intergenic | 60.0% | |
| CTCCATCACCCAGTCACTGC+TGG | - | chr7_2:78457785-78457804 | None:intergenic | 60.0% | |
| !! | TACGGTGTCACCACCGGGTT+CGG | + | chr7_2:78457829-78457848 | Msa1079360:CDS | 60.0% |
| TTTGGTACGGCGGTGTGAGG+TGG | - | chr7_2:78457857-78457876 | None:intergenic | 60.0% | |
| CACCGCCGTACCAAACAAGG+TGG | + | chr7_2:78457862-78457881 | Msa1079360:CDS | 60.0% | |
| !! | GGAGGAGTACCGGAAACCGG+TGG | + | chr7_2:78457651-78457670 | Msa1079360:CDS | 65.0% |
| CGGAAACCGGTGGTCCGTCT+TGG | + | chr7_2:78457661-78457680 | Msa1079360:CDS | 65.0% | |
| TCGCCACCAAGACGGACCAC+CGG | - | chr7_2:78457670-78457689 | None:intergenic | 65.0% | |
| GGCCAGCAGTGACTGGGTGA+TGG | + | chr7_2:78457780-78457799 | Msa1079360:CDS | 65.0% | |
| !! | GGAGGAGTACCGGAAACCGG+TGG | + | chr7_2:78457651-78457670 | Msa1079360:CDS | 65.0% |
| CGGAAACCGGTGGTCCGTCT+TGG | + | chr7_2:78457661-78457680 | Msa1079360:CDS | 65.0% | |
| TCGCCACCAAGACGGACCAC+CGG | - | chr7_2:78457670-78457689 | None:intergenic | 65.0% | |
| GGCCAGCAGTGACTGGGTGA+TGG | + | chr7_2:78457780-78457799 | Msa1079360:CDS | 65.0% | |
| ! | GTGTGAGGTGGCGCCGAACC+CGG | - | chr7_2:78457845-78457864 | None:intergenic | 70.0% |
| ! | GTGTGAGGTGGCGCCGAACC+CGG | - | chr7_2:78457845-78457864 | None:intergenic | 70.0% |
| ! | TGAGGTGGCGCCGAACCCGG+TGG | - | chr7_2:78457842-78457861 | None:intergenic | 75.0% |
| ! | TGAGGTGGCGCCGAACCCGG+TGG | - | chr7_2:78457842-78457861 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 78457270 | 78459601 | 78457270 | ID=Msa1079360;Name=Msa1079360 |
| chr7_2 | mRNA | 78457270 | 78459601 | 78457270 | ID=Msa1079360-mRNA-1;Parent=Msa1079360;Name=Msa1079360-mRNA-1;_AED=0.10;_eAED=0.10;_QI=211|0.5|0.33|0.66|0.5|0.66|3|0|446 |
| chr7_2 | exon | 78457270 | 78457908 | 78457270 | ID=Msa1079360-mRNA-1:exon:19536;Parent=Msa1079360-mRNA-1 |
| chr7_2 | exon | 78458554 | 78459420 | 78458554 | ID=Msa1079360-mRNA-1:exon:19537;Parent=Msa1079360-mRNA-1 |
| chr7_2 | exon | 78459556 | 78459601 | 78459556 | ID=Msa1079360-mRNA-1:exon:19538;Parent=Msa1079360-mRNA-1 |
| chr7_2 | five_prime_UTR | 78457270 | 78457480 | 78457270 | ID=Msa1079360-mRNA-1:five_prime_utr;Parent=Msa1079360-mRNA-1 |
| chr7_2 | CDS | 78457481 | 78457908 | 78457481 | ID=Msa1079360-mRNA-1:cds;Parent=Msa1079360-mRNA-1 |
| chr7_2 | CDS | 78458554 | 78459420 | 78458554 | ID=Msa1079360-mRNA-1:cds;Parent=Msa1079360-mRNA-1 |
| chr7_2 | CDS | 78459556 | 78459601 | 78459556 | ID=Msa1079360-mRNA-1:cds;Parent=Msa1079360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
