Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168620 | XP_039683521.1 | 97.099 | 724 | 21 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168620 | sp|P27990|PALY_MEDSA | 96.000 | 725 | 28 | 1 | 1 | 724 | 1 | 725 | 0.0 | 1433 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168620 | A0A396H5D0 | 97.099 | 724 | 21 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1457 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071370 | Msa1168620 | 0.800007 | 1.763424e-48 | -8.615850e-47 |
| Msa0690190 | Msa1168620 | 0.802159 | 6.402007e-49 | -8.615850e-47 |
| Msa1079360 | Msa1168620 | 0.868759 | 5.143864e-66 | -8.615850e-47 |
| Msa1079390 | Msa1168620 | 0.909804 | 3.795724e-82 | -8.615850e-47 |
| Msa1079400 | Msa1168620 | 0.969678 | 1.779066e-130 | -8.615850e-47 |
| Msa1123600 | Msa1168620 | 0.939432 | 1.283279e-99 | -8.615850e-47 |
| Msa1123610 | Msa1168620 | 0.857725 | 1.342020e-62 | -8.615850e-47 |
| Msa1168520 | Msa1168620 | 0.863617 | 2.191182e-64 | -8.615850e-47 |
| Msa1168530 | Msa1168620 | 0.950682 | 9.926055e-109 | -8.615850e-47 |
| Msa1168540 | Msa1168620 | 0.803929 | 2.756596e-49 | -8.615850e-47 |
| Msa1168620 | Msa1168700 | 0.939873 | 6.100014e-100 | -8.615850e-47 |
| Msa1168620 | Msa1168710 | 0.918757 | 1.050239e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168620 | MtrunA17_Chr7g0264351 | 97.099 | 724 | 21 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1457 |
| Msa1168620 | MtrunA17_Chr7g0264311 | 97.099 | 724 | 21 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1455 |
| Msa1168620 | MtrunA17_Chr7g0264341 | 96.823 | 724 | 23 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1451 |
| Msa1168620 | MtrunA17_Chr1g0181091 | 88.997 | 718 | 71 | 1 | 7 | 724 | 3 | 712 | 0.0 | 1322 |
| Msa1168620 | MtrunA17_Chr1g0199551 | 80.432 | 695 | 136 | 0 | 30 | 724 | 28 | 722 | 0.0 | 1187 |
| Msa1168620 | MtrunA17_Chr5g0448361 | 74.496 | 694 | 175 | 2 | 31 | 723 | 16 | 708 | 0.0 | 1070 |
| Msa1168620 | MtrunA17_Chr2g0326921 | 75.107 | 699 | 170 | 3 | 27 | 723 | 1 | 697 | 0.0 | 1065 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1168620 | AT2G37040.1 | 82.345 | 708 | 125 | 0 | 17 | 724 | 18 | 725 | 0.0 | 1236 |
| Msa1168620 | AT3G53260.1 | 82.828 | 693 | 119 | 0 | 32 | 724 | 25 | 717 | 0.0 | 1221 |
| Msa1168620 | AT3G10340.1 | 79.943 | 703 | 139 | 2 | 23 | 724 | 6 | 707 | 0.0 | 1165 |
| Msa1168620 | AT5G04230.1 | 73.420 | 696 | 169 | 6 | 32 | 724 | 12 | 694 | 0.0 | 1035 |
| Msa1168620 | AT5G04230.2 | 73.000 | 700 | 169 | 7 | 32 | 724 | 12 | 698 | 0.0 | 1030 |
Find 170 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTATGGAACACATTT+TGG | 0.178379 | 7_4:-61327833 | Msa1168620:CDS |
| TCTCTTTGAGGCTAACATTT+TGG | 0.190344 | 7_4:-61327971 | Msa1168620:CDS |
| TGATCCTCTTCTTGAATGTT+TGG | 0.214712 | 7_4:-61326693 | Msa1168620:CDS |
| GTCCCTCTGTCTTACATTGC+TGG | 0.215263 | 7_4:-61328168 | Msa1168620:CDS |
| AATTGAGGCTGCTGCTATTA+TGG | 0.231999 | 7_4:-61327845 | Msa1168620:CDS |
| CACACTGCTCCAAGGTTATT+CGG | 0.232317 | 7_4:-61328292 | Msa1168620:CDS |
| CTTGCACTTTCAACCTCTTT+TGG | 0.237913 | 7_4:+61326896 | Msa1168600:intron |
| AGCAATTGATTTAAGACATT+TGG | 0.270011 | 7_4:-61327224 | Msa1168620:CDS |
| AGTGCATATCTATCTTGTTT+TGG | 0.270938 | 7_4:+61327751 | Msa1168600:intron |
| CTGCAAAGCACCACCTTGTT+TGG | 0.301759 | 7_4:+61328954 | Msa1168600:intron |
| CAACCAAGATGTGAACTCTT+TGG | 0.306519 | 7_4:-61327329 | Msa1168620:CDS |
| AACCAACAAAGTTAACAAAT+TGG | 0.308916 | 7_4:+61326647 | Msa1168600:intron |
| GTAGATCATGCACTAGTTAA+TGG | 0.316257 | 7_4:-61326995 | Msa1168620:CDS |
| AGAAATCCTAGCTTGGATTA+TGG | 0.318763 | 7_4:-61327448 | Msa1168620:CDS |
| AACGGAACAGCCGTTGGTTC+CGG | 0.342001 | 7_4:-61328009 | Msa1168620:CDS |
| CTGCATCCAATGATCTTGTT+TGG | 0.353952 | 7_4:+61326842 | Msa1168600:intron |
| AACCAAGATGTGAACTCTTT+GGG | 0.363040 | 7_4:-61327328 | Msa1168620:CDS |
| GATCCTCTTCTTGAATGTTT+GGG | 0.364274 | 7_4:-61326692 | Msa1168620:CDS |
| AGCTTCTATTGTTCTCTTTG+AGG | 0.369188 | 7_4:-61327983 | Msa1168620:CDS |
| GGGAATTAGATTTGAAATCT+TGG | 0.372469 | 7_4:-61328271 | Msa1168620:CDS |
| ATGGAGTGACGTTGTTGTTA+AGG | 0.373628 | 7_4:+61328232 | Msa1168600:intron |
| AATGTCTTAAATCAATTGCT+TGG | 0.374377 | 7_4:+61327227 | Msa1168600:intron |
| ATGATCTTGTTTGGAATTGT+TGG | 0.375312 | 7_4:+61326851 | Msa1168600:intron |
| TACATTGCTGGATTGCTAAC+CGG | 0.377877 | 7_4:-61328156 | Msa1168620:CDS |
| GATCACAGCTTCAGGAGATT+TGG | 0.382346 | 7_4:-61328190 | Msa1168620:CDS |
| GAGTTAAGGCCAGCAGTGAC+TGG | 0.386890 | 7_4:-61329053 | Msa1168620:CDS |
| TTATCCATGGATACTCCAAT+AGG | 0.387124 | 7_4:+61327577 | Msa1168600:intron |
| CTTTGGACGTGGGTCGTAAC+CGG | 0.394500 | 7_4:+61327364 | Msa1168600:intron |
| CTACTCGCAGAAAGATTTGA+AGG | 0.395081 | 7_4:+61327469 | Msa1168600:intron |
| ATGAAGCTGATCCTTTGAAT+TGG | 0.399923 | 7_4:-61329254 | Msa1168620:CDS |
| TACGGTGTCACCACCGGGTT+CGG | 0.400782 | 7_4:-61328997 | Msa1168620:CDS |
| ATCTGCTAGGGCTGGAGTTA+AGG | 0.404467 | 7_4:-61329067 | Msa1168620:CDS |
| TCAAAAGATTTCGACCTTTG+AGG | 0.404732 | 7_4:-61326939 | Msa1168620:CDS |
| GTTACAATATCTTGCAAATC+CGG | 0.407527 | 7_4:-61327383 | Msa1168620:CDS |
| TTCTTGAATGTTTGGGAGAG+TGG | 0.413240 | 7_4:-61326685 | Msa1168620:CDS |
| GAAGGTCTTGCACTTGTTAA+CGG | 0.415232 | 7_4:-61328027 | Msa1168620:CDS |
| TGAAGCTGATCCTTTGAATT+GGG | 0.415897 | 7_4:-61329253 | Msa1168620:CDS |
| AATCAAGCAGAATGATTCAT+TGG | 0.416820 | 7_4:+61329305 | Msa1168600:intron |
| ACAATTCCAAACAAGATCAT+TGG | 0.419610 | 7_4:-61326848 | Msa1168620:CDS |
| CGTGGTACGATCACAGCTTC+AGG | 0.422509 | 7_4:-61328198 | Msa1168620:CDS |
| CAAGACGGACCACCGGCTTC+CGG | 0.424699 | 7_4:+61329166 | Msa1168600:intron |
| GCTGCTCGGCACTTTGGACG+TGG | 0.425552 | 7_4:+61327353 | Msa1168600:intron |
| TAGCTTGGATTATGGTTTCA+AGG | 0.427578 | 7_4:-61327440 | Msa1168620:CDS |
| ACAAGTGCAAGACCTTCTTT+TGG | 0.429300 | 7_4:+61328033 | Msa1168600:intron |
| GTCAAATGATCGGTAAATTC+AGG | 0.429420 | 7_4:+61327895 | Msa1168600:intron |
| ATGTCTTAAATCAATTGCTT+GGG | 0.430095 | 7_4:+61327228 | Msa1168600:intron |
| TGATCTTGTTTGGAATTGTT+GGG | 0.432172 | 7_4:+61326852 | Msa1168600:intron |
| AGCTTTAGAATTTGATCGTC+CGG | 0.432653 | 7_4:+61328137 | Msa1168600:intron |
| CTAGGAACTGGTTTACTAAC+CGG | 0.436001 | 7_4:-61326785 | Msa1168620:CDS |
| TATCCATGGATACTCCAATA+GGG | 0.436618 | 7_4:+61327578 | Msa1168600:intron |
| GAGAACAATAGAAGCTAAAC+CGG | 0.444891 | 7_4:+61327990 | Msa1168600:intron |
| CGGAAGCCGGTGGTCCGTCT+TGG | 0.445172 | 7_4:-61329165 | Msa1168620:CDS |
| ATATTGTAACTCAGAACAAT+AGG | 0.445191 | 7_4:+61327396 | Msa1168600:intron |
| GTGCGAGGTGGCGCCGAACC+CGG | 0.448163 | 7_4:+61328984 | Msa1168600:intron |
| GTTAGAGAGGAGCTAGGAAC+TGG | 0.457195 | 7_4:-61326797 | Msa1168620:CDS |
| CTCCATCACCCAGTCACTGC+TGG | 0.457530 | 7_4:+61329044 | Msa1168600:intron |
| ATCCATGGATAATACACGTT+TGG | 0.459440 | 7_4:-61327566 | Msa1168620:CDS |
| ACTTGTTGAAAGTGGTTGAC+AGG | 0.460419 | 7_4:-61327093 | Msa1168620:CDS |
| AATTGATTTAAGACATTTGG+AGG | 0.465528 | 7_4:-61327221 | Msa1168620:CDS |
| TCTCTAACAAACTTGTAAAG+TGG | 0.467647 | 7_4:+61326812 | Msa1168600:intron |
| ACTCTTACCATGGGTGTCAA+TGG | 0.467649 | 7_4:-61327148 | Msa1168620:CDS |
| CTGTCTGAATCTGCTAGGGC+TGG | 0.469696 | 7_4:-61329075 | Msa1168620:CDS |
| AAGCCGGTGGTCCGTCTTGG+TGG | 0.472146 | 7_4:-61329162 | Msa1168620:CDS |
| TTCTTGAAACATCGATCAAA+GGG | 0.473840 | 7_4:+61327635 | Msa1168600:intron |
| TTTGAATTACAACCAAAAGA+AGG | 0.477960 | 7_4:-61328045 | Msa1168620:CDS |
| TGGAGCTGTCTGAATCTGCT+AGG | 0.480887 | 7_4:-61329080 | Msa1168620:CDS |
| GGTTGTGCTGCTCGGCACTT+TGG | 0.482588 | 7_4:+61327347 | Msa1168600:intron |
| ACACTGCTCCAAGGTTATTC+GGG | 0.483941 | 7_4:-61328291 | Msa1168620:CDS |
| TGCGAGTAGAAATCCTAGCT+TGG | 0.486374 | 7_4:-61327455 | Msa1168620:CDS |
| AACCCAAAGAGTTCACATCT+TGG | 0.486755 | 7_4:+61327326 | Msa1168600:intron |
| CACATCTTGGTTGTGCTGCT+CGG | 0.487291 | 7_4:+61327339 | Msa1168600:intron |
| GACAGTTACGGTGTCACCAC+CGG | 0.492715 | 7_4:-61329003 | Msa1168620:CDS |
| AATGCTGGAATATTTGGAAA+CGG | 0.493618 | 7_4:-61328378 | Msa1168620:CDS |
| TCTAAAGCTCATGGACCATC+CGG | 0.493757 | 7_4:-61328123 | Msa1168620:CDS |
| TTTCTTGAAACATCGATCAA+AGG | 0.494354 | 7_4:+61327634 | Msa1168600:intron |
| ATCTAATTCCCGAATAACCT+TGG | 0.497406 | 7_4:+61328283 | Msa1168600:intron |
| CGAGACACTGACGATTTCTC+AGG | 0.498607 | 7_4:-61329139 | Msa1168620:CDS |
| AAATGTCATTTCACCGGGTG+AGG | 0.499354 | 7_4:-61326759 | Msa1168620:CDS |
| AGCTTGGATTATGGTTTCAA+GGG | 0.499976 | 7_4:-61327439 | Msa1168620:CDS |
| ACTCCATGTTTACCACTTCG+TGG | 0.503596 | 7_4:-61328216 | Msa1168620:CDS |
| TGCACATGACCATGGTGTGC+AGG | 0.506601 | 7_4:-61329103 | Msa1168620:CDS |
| CTTTGCAGAAAGAACTCATA+AGG | 0.510191 | 7_4:-61328939 | Msa1168620:intron |
| AGCGTATGGTGGAGGAGTAC+CGG | 0.511195 | 7_4:-61329185 | Msa1168620:CDS |
| CGATCAAATTCTAAAGCTCA+TGG | 0.519333 | 7_4:-61328132 | Msa1168620:CDS |
| GCATTAAGTATTTCTCCGGA+TGG | 0.520440 | 7_4:+61328108 | Msa1168600:intron |
| AACAAAGGCACGGACAGTTA+CGG | 0.520670 | 7_4:-61329015 | Msa1168620:CDS |
| GAAGACCCTCTTGCCAAAAG+AGG | 0.521788 | 7_4:-61326909 | Msa1168620:CDS |
| AACCCCTATTGGAGTATCCA+TGG | 0.530273 | 7_4:-61327581 | Msa1168620:CDS |
| CGGAGAAAATGTCATTTCAC+CGG | 0.530856 | 7_4:-61326765 | Msa1168620:CDS |
| CGTTTGGCACTCGCATCGAT+TGG | 0.531219 | 7_4:-61327550 | Msa1168620:CDS |
| CAAGGGATCTGAAATTGCCA+TGG | 0.533499 | 7_4:-61327422 | Msa1168620:CDS |
| CAACTTGTGTGTCAAATGAT+CGG | 0.535020 | 7_4:+61327885 | Msa1168600:intron |
| AAGTTTGTTAGAGAGGAGCT+AGG | 0.538179 | 7_4:-61326803 | Msa1168620:CDS |
| GGCCAGCAGTGACTGGGTGA+TGG | 0.539190 | 7_4:-61329046 | Msa1168620:CDS |
| CAAAGTTAACAAATTGGAAG+AGG | 0.539814 | 7_4:+61326653 | Msa1168600:intron |
| ACCATGGTCATGTGCAGCAA+TGG | 0.541335 | 7_4:+61329110 | Msa1168600:intron |
| TGCCAAACGTGTATTATCCA+TGG | 0.541802 | 7_4:+61327564 | Msa1168600:intron |
| AGAACTTCACCACAATGGCT+TGG | 0.541972 | 7_4:-61327727 | Msa1168620:CDS |
| ACTTTACAAGTTTGTTAGAG+AGG | 0.544419 | 7_4:-61326810 | Msa1168620:CDS |
| CTCAGAACAATAGGAAGCCA+TGG | 0.547791 | 7_4:+61327405 | Msa1168600:intron |
| AATCGAATCACTTCAATCAA+AGG | 0.551824 | 7_4:+61327703 | Msa1168600:intron |
| GTTGTTAAGGAGCTTAGTGA+TGG | 0.555678 | 7_4:+61328245 | Msa1168600:intron |
| TTGAAACCATAATCCAAGCT+AGG | 0.555782 | 7_4:+61327442 | Msa1168600:intron |
| GATCTCTCTCTCAATTGACT+TGG | 0.558820 | 7_4:+61327675 | Msa1168600:intron |
| TCAAGAAACAAAGCTTTGCA+TGG | 0.562486 | 7_4:-61327619 | Msa1168620:CDS |
| AAGCACCACCTTGTTTGGTA+CGG | 0.564097 | 7_4:+61328959 | Msa1168600:intron |
| GGTGGAGGAGTACCGGAAGC+CGG | 0.566790 | 7_4:-61329178 | Msa1168620:CDS |
| GGAGCTGTCTGAATCTGCTA+GGG | 0.568528 | 7_4:-61329079 | Msa1168620:CDS |
| AAAGGGTATGTAGCGCTACA+AGG | 0.571765 | 7_4:+61327043 | Msa1168600:intron |
| CAAACAAGATCATTGGATGC+AGG | 0.571877 | 7_4:-61326841 | Msa1168620:CDS |
| ACACCACCCTGGTCAAATTG+AGG | 0.572511 | 7_4:-61327860 | Msa1168620:CDS |
| GCTGCTCTTGTTGCCGTGTG+TGG | 0.574124 | 7_4:+61328333 | Msa1168600:intron |
| CTTGTTGAAAGTGGTTGACA+GGG | 0.574600 | 7_4:-61327092 | Msa1168620:CDS |
| GCAGCAGCCTCAATTTGACC+AGG | 0.576243 | 7_4:+61327853 | Msa1168600:intron |
| TTTGGTACGGCGGTGCGAGG+TGG | 0.578567 | 7_4:+61328972 | Msa1168600:intron |
| GCTGCCACACCCCAATTCAA+AGG | 0.581598 | 7_4:+61329243 | Msa1168600:intron |
| TCGCCACCAAGACGGACCAC+CGG | 0.582161 | 7_4:+61329159 | Msa1168600:intron |
| TCGCACCGCCGTACCAAACA+AGG | 0.582783 | 7_4:-61328967 | Msa1168620:CDS |
| CATGAGCTGAAGGATCTCAA+TGG | 0.583537 | 7_4:+61327276 | Msa1168600:intron |
| TGAGGTGAAGCGTATGGTGG+AGG | 0.584737 | 7_4:-61329193 | Msa1168620:CDS |
| ATCAAAGGACCAAGCCATTG+TGG | 0.585110 | 7_4:+61327718 | Msa1168600:intron |
| GCCATTGCTGCACATGACCA+TGG | 0.585263 | 7_4:-61329111 | Msa1168620:CDS |
| TGATCCTTTGAATTGGGGTG+TGG | 0.587095 | 7_4:-61329247 | Msa1168620:CDS |
| AGGTGGAAGACATGAGCTGA+AGG | 0.588332 | 7_4:+61327266 | Msa1168600:intron |
| AGTTAAGGCCAGCAGTGACT+GGG | 0.592895 | 7_4:-61329052 | Msa1168620:CDS |
| GTGGCAGCTGAGGCAATGAA+AGG | 0.593497 | 7_4:-61329228 | Msa1168620:CDS |
| TCTCCCAAACATTCAAGAAG+AGG | 0.593567 | 7_4:+61326689 | Msa1168600:intron |
| CAAAAGAGGTTGAAAGTGCA+AGG | 0.594086 | 7_4:-61326895 | Msa1168620:CDS |
| AGAAGCTAAACCGGAACCAA+CGG | 0.596171 | 7_4:+61327999 | Msa1168600:intron |
| CACCACCTTGTTTGGTACGG+CGG | 0.598168 | 7_4:+61328962 | Msa1168600:intron |
| CTTGTTAACGGAACAGCCGT+TGG | 0.598411 | 7_4:-61328015 | Msa1168620:CDS |
| TTGTTTGGTACGGCGGTGCG+AGG | 0.600854 | 7_4:+61328969 | Msa1168600:intron |
| GGTCTTCAACTCTTCCTCAA+AGG | 0.602276 | 7_4:+61326925 | Msa1168600:intron |
| CTGCTCGGCACTTTGGACGT+GGG | 0.604049 | 7_4:+61327354 | Msa1168600:intron |
| CACTTAGAACTTCACCACAA+TGG | 0.606171 | 7_4:-61327732 | Msa1168620:CDS |
| GAATGTTTGGGAGAGTGGAA+TGG | 0.607071 | 7_4:-61326680 | Msa1168620:CDS |
| TGGGTTTCCACTCTCATATG+CGG | 0.607079 | 7_4:+61326871 | Msa1168600:intron |
| AGTTTGTCACACTCCTCACC+CGG | 0.607601 | 7_4:+61326746 | Msa1168600:intron |
| ACAGTTACGGTGTCACCACC+GGG | 0.611533 | 7_4:-61329002 | Msa1168620:CDS |
| ATCCATGGATACTCCAATAG+GGG | 0.613815 | 7_4:+61327579 | Msa1168600:intron |
| GAATTGGGGTGTGGCAGCTG+AGG | 0.617765 | 7_4:-61329238 | Msa1168620:CDS |
| TTGGGATAGTGCAATCAAGA+AGG | 0.619973 | 7_4:+61327246 | Msa1168600:intron |
| AAGTTCTCCATTGACACCCA+TGG | 0.622303 | 7_4:+61327141 | Msa1168600:intron |
| AGAAACAAAGCTTTGCATGG+TGG | 0.624866 | 7_4:-61327616 | Msa1168620:CDS |
| GGATAGTGCAATCAAGAAGG+TGG | 0.625147 | 7_4:+61327249 | Msa1168600:intron |
| GCAAGGTCCGCATATGAGAG+TGG | 0.625862 | 7_4:-61326878 | Msa1168620:CDS |
| ATCCAGCAATGTAAGACAGA+GGG | 0.626529 | 7_4:+61328166 | Msa1168600:intron |
| GACACTGACGATTTCTCAGG+TGG | 0.626830 | 7_4:-61329136 | Msa1168620:CDS |
| CCTTGATGAGGTGAAGCGTA+TGG | 0.628479 | 7_4:-61329199 | Msa1168620:CDS |
| AAGTCACACACTACCACACA+CGG | 0.628536 | 7_4:-61328346 | Msa1168620:CDS |
| GGAGAAAATGTCATTTCACC+GGG | 0.629782 | 7_4:-61326764 | Msa1168620:CDS |
| TGTGTTGATTCTCACTAGCA+TGG | 0.632917 | 7_4:+61328311 | Msa1168600:intron |
| AGAATCAACACACTGCTCCA+AGG | 0.635657 | 7_4:-61328300 | Msa1168620:CDS |
| GAAGCTGATCCTTTGAATTG+GGG | 0.639983 | 7_4:-61329252 | Msa1168620:CDS |
| GAAAGGCAGTCACCTTGATG+AGG | 0.642522 | 7_4:-61329211 | Msa1168620:CDS |
| GGAGGAGTACCGGAAGCCGG+TGG | 0.645003 | 7_4:-61329175 | Msa1168620:CDS |
| GTACCACGAAGTGGTAAACA+TGG | 0.652497 | 7_4:+61328213 | Msa1168600:intron |
| CCATACGCTTCACCTCATCA+AGG | 0.653785 | 7_4:+61329199 | Msa1168600:intron |
| GCTGTGATCGTACCACGAAG+TGG | 0.655564 | 7_4:+61328204 | Msa1168600:intron |
| CACAAGTTGAAACACCACCC+TGG | 0.660975 | 7_4:-61327871 | Msa1168620:CDS |
| TGATGAGGTGAAGCGTATGG+TGG | 0.671300 | 7_4:-61329196 | Msa1168620:CDS |
| TCAGTGTCTCGCCACCAAGA+CGG | 0.673504 | 7_4:+61329151 | Msa1168600:intron |
| GGAGAGTATGAACAAAGGCA+CGG | 0.688439 | 7_4:-61329025 | Msa1168620:CDS |
| CAGCCTCAATTTGACCAGGG+TGG | 0.690386 | 7_4:+61327857 | Msa1168600:intron |
| ACAGCTCCACCTGCACACCA+TGG | 0.693221 | 7_4:+61329094 | Msa1168600:intron |
| ACATGACCATGGTGTGCAGG+TGG | 0.694429 | 7_4:-61329100 | Msa1168620:CDS |
| AATCCAGCAATGTAAGACAG+AGG | 0.700859 | 7_4:+61328165 | Msa1168600:intron |
| CAGCAGCCTCAATTTGACCA+GGG | 0.707184 | 7_4:+61327854 | Msa1168600:intron |
| GTGATGGAGAGTATGAACAA+AGG | 0.730510 | 7_4:-61329030 | Msa1168620:CDS |
| CACCGCCGTACCAAACAAGG+TGG | 0.735748 | 7_4:-61328964 | Msa1168620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAATTTATTTAAAT+TGG | - | chr7_4:61327458-61327477 | Msa1168620:CDS | 0.0% |
| !!! | ACTTCTTTTAAAAAAAAATA+TGG | - | chr7_4:61327497-61327516 | Msa1168620:CDS | 10.0% |
| !!! | AAAAATTATCCTTGTTATTT+TGG | - | chr7_4:61327238-61327257 | Msa1168620:CDS | 15.0% |
| !! | ATTAGAAATCCAAAATAACA+AGG | + | chr7_4:61327250-61327269 | Msa1168600:intron | 20.0% |
| !!! | CCAAGAAAAAAGTACTTATA+AGG | + | chr7_4:61327121-61327140 | Msa1168600:intron | 25.0% |
| !!! | CCTTATAAGTACTTTTTTCT+TGG | - | chr7_4:61327118-61327137 | Msa1168620:CDS | 25.0% |
| !!! | TACTTTGAAATGAAAACAAG+TGG | - | chr7_4:61327374-61327393 | Msa1168620:CDS | 25.0% |
| ! | ATTATTGTATTGAGAGATAG+TGG | + | chr7_4:61327413-61327432 | Msa1168600:intron | 25.0% |
| ! | CAATACAATAATACATGTGT+AGG | - | chr7_4:61327421-61327440 | Msa1168620:CDS | 25.0% |
| !!! | GCTACTTAATTCTTGTTTTT+AGG | - | chr7_4:61327593-61327612 | Msa1168620:CDS | 25.0% |
| !! | TTTTTGAATGCTGGAATATT+TGG | - | chr7_4:61327616-61327635 | Msa1168620:CDS | 25.0% |
| !! | TTTTGCATTAAGTATTTCTC+CGG | + | chr7_4:61327899-61327918 | Msa1168600:intron | 25.0% |
| ! | TTTGAATTACAACCAAAAGA+AGG | - | chr7_4:61327955-61327974 | Msa1168620:CDS | 25.0% |
| !! | GTCAATGATTTTTACAACAA+TGG | - | chr7_4:61328504-61328523 | Msa1168620:intron | 25.0% |
| ! | ATATTGTAACTCAGAACAAT+AGG | + | chr7_4:61328607-61328626 | Msa1168600:intron | 25.0% |
| ! | ATGTCTTAAATCAATTGCTT+GGG | + | chr7_4:61328775-61328794 | Msa1168600:intron | 25.0% |
| ! | AATGTCTTAAATCAATTGCT+TGG | + | chr7_4:61328776-61328795 | Msa1168600:intron | 25.0% |
| !! | AGCAATTGATTTAAGACATT+TGG | - | chr7_4:61328776-61328795 | Msa1168620:intron | 25.0% |
| !! | AATTGATTTAAGACATTTGG+AGG | - | chr7_4:61328779-61328798 | Msa1168620:intron | 25.0% |
| AATCAAGCAGAATGATTCAT+TGG | + | chr7_4:61326698-61326717 | Msa1168600:intron | 30.0% | |
| TTGAAATGAAAACAAGTGGT+AGG | - | chr7_4:61327378-61327397 | Msa1168620:CDS | 30.0% | |
| TGAAATGAAAACAAGTGGTA+GGG | - | chr7_4:61327379-61327398 | Msa1168620:CDS | 30.0% | |
| !!! | GTTTTTAGGTTTTTGAATGC+TGG | - | chr7_4:61327607-61327626 | Msa1168620:CDS | 30.0% |
| AATGCTGGAATATTTGGAAA+CGG | - | chr7_4:61327622-61327641 | Msa1168620:CDS | 30.0% | |
| ! | GGGAATTAGATTTGAAATCT+TGG | - | chr7_4:61327729-61327748 | Msa1168620:CDS | 30.0% |
| ! | ATTTTTGCTGAAGTTATGCA+AGG | - | chr7_4:61328078-61328097 | Msa1168620:CDS | 30.0% |
| ! | TTTTTGCTGAAGTTATGCAA+GGG | - | chr7_4:61328079-61328098 | Msa1168620:CDS | 30.0% |
| ! | TGCTATTATGGAACACATTT+TGG | - | chr7_4:61328167-61328186 | Msa1168620:CDS | 30.0% |
| ! | ATTATGGAACACATTTTGGA+TGG | - | chr7_4:61328171-61328190 | Msa1168620:CDS | 30.0% |
| !! | AGTGCATATCTATCTTGTTT+TGG | + | chr7_4:61328252-61328271 | Msa1168600:intron | 30.0% |
| AATCGAATCACTTCAATCAA+AGG | + | chr7_4:61328300-61328319 | Msa1168600:intron | 30.0% | |
| TTCTTGAAACATCGATCAAA+GGG | + | chr7_4:61328368-61328387 | Msa1168600:intron | 30.0% | |
| TTTCTTGAAACATCGATCAA+AGG | + | chr7_4:61328369-61328388 | Msa1168600:intron | 30.0% | |
| GTTACAATATCTTGCAAATC+CGG | - | chr7_4:61328617-61328636 | Msa1168620:intron | 30.0% | |
| !! | CTTTTTCACAGAATCTTGAA+GGG | + | chr7_4:61328887-61328906 | Msa1168600:intron | 30.0% |
| !! | TCTTTTTCACAGAATCTTGA+AGG | + | chr7_4:61328888-61328907 | Msa1168600:intron | 30.0% |
| !! | TGAAAAAGACTTGTTGAAAG+TGG | - | chr7_4:61328899-61328918 | Msa1168620:intron | 30.0% |
| ! | TGATCTTGTTTGGAATTGTT+GGG | + | chr7_4:61329151-61329170 | Msa1168600:intron | 30.0% |
| ! | ATGATCTTGTTTGGAATTGT+TGG | + | chr7_4:61329152-61329171 | Msa1168600:intron | 30.0% |
| ACAATTCCAAACAAGATCAT+TGG | - | chr7_4:61329152-61329171 | Msa1168620:CDS | 30.0% | |
| TCTCTAACAAACTTGTAAAG+TGG | + | chr7_4:61329191-61329210 | Msa1168600:intron | 30.0% | |
| !! | ACTTTACAAGTTTGTTAGAG+AGG | - | chr7_4:61329190-61329209 | Msa1168620:CDS | 30.0% |
| ATGAAGCTGATCCTTTGAAT+TGG | - | chr7_4:61326746-61326765 | Msa1168620:CDS | 35.0% | |
| TGAAGCTGATCCTTTGAATT+GGG | - | chr7_4:61326747-61326766 | Msa1168620:CDS | 35.0% | |
| CTTTGCAGAAAGAACTCATA+AGG | - | chr7_4:61327061-61327080 | Msa1168620:CDS | 35.0% | |
| ATCTAATTCCCGAATAACCT+TGG | + | chr7_4:61327720-61327739 | Msa1168600:intron | 35.0% | |
| !! | AGCTTTAGAATTTGATCGTC+CGG | + | chr7_4:61327866-61327885 | Msa1168600:intron | 35.0% |
| !! | CGATCAAATTCTAAAGCTCA+TGG | - | chr7_4:61327868-61327887 | Msa1168620:CDS | 35.0% |
| ! | AAAGAAGCTTTTCAATCTGC+TGG | - | chr7_4:61327916-61327935 | Msa1168620:CDS | 35.0% |
| GAGAACAATAGAAGCTAAAC+CGG | + | chr7_4:61328013-61328032 | Msa1168600:intron | 35.0% | |
| AGCTTCTATTGTTCTCTTTG+AGG | - | chr7_4:61328017-61328036 | Msa1168620:CDS | 35.0% | |
| !!! | TCTCTTTGAGGCTAACATTT+TGG | - | chr7_4:61328029-61328048 | Msa1168620:CDS | 35.0% |
| GTCAAATGATCGGTAAATTC+AGG | + | chr7_4:61328108-61328127 | Msa1168600:intron | 35.0% | |
| CAACTTGTGTGTCAAATGAT+CGG | + | chr7_4:61328118-61328137 | Msa1168600:intron | 35.0% | |
| !!! | TCTTGTTTTGGTTTCTGCAA+AGG | + | chr7_4:61328240-61328259 | Msa1168600:intron | 35.0% |
| TCAAGAAACAAAGCTTTGCA+TGG | - | chr7_4:61328381-61328400 | Msa1168620:CDS | 35.0% | |
| !! | TTGCATGGTGGAAATTTTCA+AGG | - | chr7_4:61328396-61328415 | Msa1168620:intron | 35.0% |
| !! | AATTTTCAAGGAACCCCTAT+TGG | - | chr7_4:61328408-61328427 | Msa1168620:intron | 35.0% |
| TATCCATGGATACTCCAATA+GGG | + | chr7_4:61328425-61328444 | Msa1168600:intron | 35.0% | |
| TTATCCATGGATACTCCAAT+AGG | + | chr7_4:61328426-61328445 | Msa1168600:intron | 35.0% | |
| ATCCATGGATAATACACGTT+TGG | - | chr7_4:61328434-61328453 | Msa1168620:intron | 35.0% | |
| AGAAATCCTAGCTTGGATTA+TGG | - | chr7_4:61328552-61328571 | Msa1168620:intron | 35.0% | |
| TTGAAACCATAATCCAAGCT+AGG | + | chr7_4:61328561-61328580 | Msa1168600:intron | 35.0% | |
| TAGCTTGGATTATGGTTTCA+AGG | - | chr7_4:61328560-61328579 | Msa1168620:intron | 35.0% | |
| AGCTTGGATTATGGTTTCAA+GGG | - | chr7_4:61328561-61328580 | Msa1168620:intron | 35.0% | |
| AACCAAGATGTGAACTCTTT+GGG | - | chr7_4:61328672-61328691 | Msa1168620:intron | 35.0% | |
| !! | CTTTTTGGCAACTTGACTTA+CGG | + | chr7_4:61328832-61328851 | Msa1168600:intron | 35.0% |
| GTAGATCATGCACTAGTTAA+TGG | - | chr7_4:61329005-61329024 | Msa1168620:CDS | 35.0% | |
| TCAAAAGATTTCGACCTTTG+AGG | - | chr7_4:61329061-61329080 | Msa1168620:CDS | 35.0% | |
| ! | CTATTTTCAGCTATGTGTCA+TGG | - | chr7_4:61329275-61329294 | Msa1168620:CDS | 35.0% |
| TGATCCTCTTCTTGAATGTT+TGG | - | chr7_4:61329307-61329326 | Msa1168620:CDS | 35.0% | |
| GATCCTCTTCTTGAATGTTT+GGG | - | chr7_4:61329308-61329327 | Msa1168620:CDS | 35.0% | |
| GAAGCTGATCCTTTGAATTG+GGG | - | chr7_4:61326748-61326767 | Msa1168620:CDS | 40.0% | |
| ! | GTGATGGAGAGTATGAACAA+AGG | - | chr7_4:61326970-61326989 | Msa1168620:CDS | 40.0% |
| !! | TGTGTTGATTCTCACTAGCA+TGG | + | chr7_4:61327692-61327711 | Msa1168600:intron | 40.0% |
| GTTGTTAAGGAGCTTAGTGA+TGG | + | chr7_4:61327758-61327777 | Msa1168600:intron | 40.0% | |
| ! | ATGGAGTGACGTTGTTGTTA+AGG | + | chr7_4:61327771-61327790 | Msa1168600:intron | 40.0% |
| ATCCAGCAATGTAAGACAGA+GGG | + | chr7_4:61327837-61327856 | Msa1168600:intron | 40.0% | |
| AATCCAGCAATGTAAGACAG+AGG | + | chr7_4:61327838-61327857 | Msa1168600:intron | 40.0% | |
| TACATTGCTGGATTGCTAAC+CGG | - | chr7_4:61327844-61327863 | Msa1168620:CDS | 40.0% | |
| GCATTAAGTATTTCTCCGGA+TGG | + | chr7_4:61327895-61327914 | Msa1168600:intron | 40.0% | |
| ! | ACAAGTGCAAGACCTTCTTT+TGG | + | chr7_4:61327970-61327989 | Msa1168600:intron | 40.0% |
| ! | GAAGGTCTTGCACTTGTTAA+CGG | - | chr7_4:61327973-61327992 | Msa1168620:CDS | 40.0% |
| AATTGAGGCTGCTGCTATTA+TGG | - | chr7_4:61328155-61328174 | Msa1168620:CDS | 40.0% | |
| CACTTAGAACTTCACCACAA+TGG | - | chr7_4:61328268-61328287 | Msa1168620:CDS | 40.0% | |
| GATCTCTCTCTCAATTGACT+TGG | + | chr7_4:61328328-61328347 | Msa1168600:intron | 40.0% | |
| AGAAACAAAGCTTTGCATGG+TGG | - | chr7_4:61328384-61328403 | Msa1168620:CDS | 40.0% | |
| ATCCATGGATACTCCAATAG+GGG | + | chr7_4:61328424-61328443 | Msa1168600:intron | 40.0% | |
| TGCCAAACGTGTATTATCCA+TGG | + | chr7_4:61328439-61328458 | Msa1168600:intron | 40.0% | |
| CTACTCGCAGAAAGATTTGA+AGG | + | chr7_4:61328534-61328553 | Msa1168600:intron | 40.0% | |
| CAACCAAGATGTGAACTCTT+TGG | - | chr7_4:61328671-61328690 | Msa1168620:intron | 40.0% | |
| AACCCAAAGAGTTCACATCT+TGG | + | chr7_4:61328677-61328696 | Msa1168600:intron | 40.0% | |
| TTGGGATAGTGCAATCAAGA+AGG | + | chr7_4:61328757-61328776 | Msa1168600:intron | 40.0% | |
| TGCCAAAAAGACTCTTACCA+TGG | - | chr7_4:61328842-61328861 | Msa1168620:intron | 40.0% | |
| GCCAAAAAGACTCTTACCAT+GGG | - | chr7_4:61328843-61328862 | Msa1168620:intron | 40.0% | |
| ! | ACCCATGGTAAGAGTCTTTT+TGG | + | chr7_4:61328847-61328866 | Msa1168600:intron | 40.0% |
| ! | ACTTGTTGAAAGTGGTTGAC+AGG | - | chr7_4:61328907-61328926 | Msa1168620:intron | 40.0% |
| CTTGTTGAAAGTGGTTGACA+GGG | - | chr7_4:61328908-61328927 | Msa1168620:intron | 40.0% | |
| ACCCTTTGAGTCAAAAACTC+AGG | - | chr7_4:61328973-61328992 | Msa1168620:CDS | 40.0% | |
| !! | GCCTGAGTTTTTGACTCAAA+GGG | + | chr7_4:61328977-61328996 | Msa1168600:intron | 40.0% |
| !! | TGCCTGAGTTTTTGACTCAA+AGG | + | chr7_4:61328978-61328997 | Msa1168600:intron | 40.0% |
| TCAAAAACTCAGGCAAGTGT+TGG | - | chr7_4:61328983-61329002 | Msa1168620:CDS | 40.0% | |
| ! | TTCAACCTCTTTTGGCAAGA+GGG | + | chr7_4:61329099-61329118 | Msa1168600:intron | 40.0% |
| ! | TTTCAACCTCTTTTGGCAAG+AGG | + | chr7_4:61329100-61329119 | Msa1168600:intron | 40.0% |
| ! | CTTGCACTTTCAACCTCTTT+TGG | + | chr7_4:61329107-61329126 | Msa1168600:intron | 40.0% |
| ! | CAAAAGAGGTTGAAAGTGCA+AGG | - | chr7_4:61329105-61329124 | Msa1168620:CDS | 40.0% |
| CTGCATCCAATGATCTTGTT+TGG | + | chr7_4:61329161-61329180 | Msa1168600:intron | 40.0% | |
| CAAACAAGATCATTGGATGC+AGG | - | chr7_4:61329159-61329178 | Msa1168620:CDS | 40.0% | |
| !! | AAGTTTGTTAGAGAGGAGCT+AGG | - | chr7_4:61329197-61329216 | Msa1168620:CDS | 40.0% |
| ! | CTAGGAACTGGTTTACTAAC+CGG | - | chr7_4:61329215-61329234 | Msa1168620:CDS | 40.0% |
| ! | CGGTGAAATGACATTTTCTC+CGG | + | chr7_4:61329237-61329256 | Msa1168600:intron | 40.0% |
| ! | CGGAGAAAATGTCATTTCAC+CGG | - | chr7_4:61329235-61329254 | Msa1168620:CDS | 40.0% |
| ! | GGAGAAAATGTCATTTCACC+GGG | - | chr7_4:61329236-61329255 | Msa1168620:CDS | 40.0% |
| TCTCCCAAACATTCAAGAAG+AGG | + | chr7_4:61329314-61329333 | Msa1168600:intron | 40.0% | |
| TTCTTGAATGTTTGGGAGAG+TGG | - | chr7_4:61329315-61329334 | Msa1168620:CDS | 40.0% | |
| TGATCCTTTGAATTGGGGTG+TGG | - | chr7_4:61326753-61326772 | Msa1168620:CDS | 45.0% | |
| ! | GGAGAGTATGAACAAAGGCA+CGG | - | chr7_4:61326975-61326994 | Msa1168620:CDS | 45.0% |
| ! | AACAAAGGCACGGACAGTTA+CGG | - | chr7_4:61326985-61327004 | Msa1168620:CDS | 45.0% |
| ! | AAGCACCACCTTGTTTGGTA+CGG | + | chr7_4:61327044-61327063 | Msa1168600:intron | 45.0% |
| AAGTCACACACTACCACACA+CGG | - | chr7_4:61327654-61327673 | Msa1168620:CDS | 45.0% | |
| AGAATCAACACACTGCTCCA+AGG | - | chr7_4:61327700-61327719 | Msa1168620:CDS | 45.0% | |
| CACACTGCTCCAAGGTTATT+CGG | - | chr7_4:61327708-61327727 | Msa1168620:CDS | 45.0% | |
| ACACTGCTCCAAGGTTATTC+GGG | - | chr7_4:61327709-61327728 | Msa1168620:CDS | 45.0% | |
| ACTCCATGTTTACCACTTCG+TGG | - | chr7_4:61327784-61327803 | Msa1168620:CDS | 45.0% | |
| GTACCACGAAGTGGTAAACA+TGG | + | chr7_4:61327790-61327809 | Msa1168600:intron | 45.0% | |
| GATCACAGCTTCAGGAGATT+TGG | - | chr7_4:61327810-61327829 | Msa1168620:CDS | 45.0% | |
| ! | TCTAAAGCTCATGGACCATC+CGG | - | chr7_4:61327877-61327896 | Msa1168620:CDS | 45.0% |
| AGAAGCTAAACCGGAACCAA+CGG | + | chr7_4:61328004-61328023 | Msa1168600:intron | 45.0% | |
| AGAACTTCACCACAATGGCT+TGG | - | chr7_4:61328273-61328292 | Msa1168620:CDS | 45.0% | |
| ATCAAAGGACCAAGCCATTG+TGG | + | chr7_4:61328285-61328304 | Msa1168600:intron | 45.0% | |
| ! | AACCCCTATTGGAGTATCCA+TGG | - | chr7_4:61328419-61328438 | Msa1168620:intron | 45.0% |
| TGCGAGTAGAAATCCTAGCT+TGG | - | chr7_4:61328545-61328564 | Msa1168620:intron | 45.0% | |
| ! | CAAGGGATCTGAAATTGCCA+TGG | - | chr7_4:61328578-61328597 | Msa1168620:intron | 45.0% |
| CTCAGAACAATAGGAAGCCA+TGG | + | chr7_4:61328598-61328617 | Msa1168600:intron | 45.0% | |
| CATGAGCTGAAGGATCTCAA+TGG | + | chr7_4:61328727-61328746 | Msa1168600:intron | 45.0% | |
| GGATAGTGCAATCAAGAAGG+TGG | + | chr7_4:61328754-61328773 | Msa1168600:intron | 45.0% | |
| ACTCTTACCATGGGTGTCAA+TGG | - | chr7_4:61328852-61328871 | Msa1168620:intron | 45.0% | |
| AAGTTCTCCATTGACACCCA+TGG | + | chr7_4:61328862-61328881 | Msa1168600:intron | 45.0% | |
| ! | AAAGGGTATGTAGCGCTACA+AGG | + | chr7_4:61328960-61328979 | Msa1168600:intron | 45.0% |
| GGTCTTCAACTCTTCCTCAA+AGG | + | chr7_4:61329078-61329097 | Msa1168600:intron | 45.0% | |
| TGGGTTTCCACTCTCATATG+CGG | + | chr7_4:61329132-61329151 | Msa1168600:intron | 45.0% | |
| ! | AAATGTCATTTCACCGGGTG+AGG | - | chr7_4:61329241-61329260 | Msa1168620:CDS | 45.0% |
| GAATGTTTGGGAGAGTGGAA+TGG | - | chr7_4:61329320-61329339 | Msa1168620:CDS | 45.0% | |
| !! | TTCTTAAATAAAAAAAATAT+GGG | + | chr7_4:61327278-61327297 | Msa1168600:intron | 5.0% |
| !! | ATTCTTAAATAAAAAAAATA+TGG | + | chr7_4:61327279-61327298 | Msa1168600:intron | 5.0% |
| !!! | TAATATTTTAAATCAAATAA+AGG | - | chr7_4:61327311-61327330 | Msa1168620:CDS | 5.0% |
| GAAAGGCAGTCACCTTGATG+AGG | - | chr7_4:61326789-61326808 | Msa1168620:CDS | 50.0% | |
| CCATACGCTTCACCTCATCA+AGG | + | chr7_4:61326804-61326823 | Msa1168600:intron | 50.0% | |
| CCTTGATGAGGTGAAGCGTA+TGG | - | chr7_4:61326801-61326820 | Msa1168620:CDS | 50.0% | |
| TGATGAGGTGAAGCGTATGG+TGG | - | chr7_4:61326804-61326823 | Msa1168620:CDS | 50.0% | |
| CGAGACACTGACGATTTCTC+AGG | - | chr7_4:61326861-61326880 | Msa1168620:CDS | 50.0% | |
| GACACTGACGATTTCTCAGG+TGG | - | chr7_4:61326864-61326883 | Msa1168620:CDS | 50.0% | |
| ACCATGGTCATGTGCAGCAA+TGG | + | chr7_4:61326893-61326912 | Msa1168600:intron | 50.0% | |
| TGGAGCTGTCTGAATCTGCT+AGG | - | chr7_4:61326920-61326939 | Msa1168620:CDS | 50.0% | |
| GGAGCTGTCTGAATCTGCTA+GGG | - | chr7_4:61326921-61326940 | Msa1168620:CDS | 50.0% | |
| ATCTGCTAGGGCTGGAGTTA+AGG | - | chr7_4:61326933-61326952 | Msa1168620:CDS | 50.0% | |
| AGTTAAGGCCAGCAGTGACT+GGG | - | chr7_4:61326948-61326967 | Msa1168620:CDS | 50.0% | |
| ! | CTGCAAAGCACCACCTTGTT+TGG | + | chr7_4:61327049-61327068 | Msa1168600:intron | 50.0% |
| GTCCCTCTGTCTTACATTGC+TGG | - | chr7_4:61327832-61327851 | Msa1168620:CDS | 50.0% | |
| CTTGTTAACGGAACAGCCGT+TGG | - | chr7_4:61327985-61328004 | Msa1168620:CDS | 50.0% | |
| ! | CACAAGTTGAAACACCACCC+TGG | - | chr7_4:61328129-61328148 | Msa1168620:CDS | 50.0% |
| ACACCACCCTGGTCAAATTG+AGG | - | chr7_4:61328140-61328159 | Msa1168620:CDS | 50.0% | |
| CAGCAGCCTCAATTTGACCA+GGG | + | chr7_4:61328149-61328168 | Msa1168600:intron | 50.0% | |
| ! | CACATCTTGGTTGTGCTGCT+CGG | + | chr7_4:61328664-61328683 | Msa1168600:intron | 50.0% |
| AGGTGGAAGACATGAGCTGA+AGG | + | chr7_4:61328737-61328756 | Msa1168600:intron | 50.0% | |
| GAAGACCCTCTTGCCAAAAG+AGG | - | chr7_4:61329091-61329110 | Msa1168620:CDS | 50.0% | |
| GTTAGAGAGGAGCTAGGAAC+TGG | - | chr7_4:61329203-61329222 | Msa1168620:CDS | 50.0% | |
| AGTTTGTCACACTCCTCACC+CGG | + | chr7_4:61329257-61329276 | Msa1168600:intron | 50.0% | |
| GCTGCCACACCCCAATTCAA+AGG | + | chr7_4:61326760-61326779 | Msa1168600:intron | 55.0% | |
| GTGGCAGCTGAGGCAATGAA+AGG | - | chr7_4:61326772-61326791 | Msa1168620:CDS | 55.0% | |
| TGAGGTGAAGCGTATGGTGG+AGG | - | chr7_4:61326807-61326826 | Msa1168620:CDS | 55.0% | |
| ! | AGCGTATGGTGGAGGAGTAC+CGG | - | chr7_4:61326815-61326834 | Msa1168620:CDS | 55.0% |
| TCAGTGTCTCGCCACCAAGA+CGG | + | chr7_4:61326852-61326871 | Msa1168600:intron | 55.0% | |
| GCCATTGCTGCACATGACCA+TGG | - | chr7_4:61326889-61326908 | Msa1168620:CDS | 55.0% | |
| TGCACATGACCATGGTGTGC+AGG | - | chr7_4:61326897-61326916 | Msa1168620:CDS | 55.0% | |
| ACATGACCATGGTGTGCAGG+TGG | - | chr7_4:61326900-61326919 | Msa1168620:CDS | 55.0% | |
| CTGTCTGAATCTGCTAGGGC+TGG | - | chr7_4:61326925-61326944 | Msa1168620:CDS | 55.0% | |
| GAGTTAAGGCCAGCAGTGAC+TGG | - | chr7_4:61326947-61326966 | Msa1168620:CDS | 55.0% | |
| !! | GACAGTTACGGTGTCACCAC+CGG | - | chr7_4:61326997-61327016 | Msa1168620:CDS | 55.0% |
| !! | ACAGTTACGGTGTCACCACC+GGG | - | chr7_4:61326998-61327017 | Msa1168620:CDS | 55.0% |
| ! | CACCACCTTGTTTGGTACGG+CGG | + | chr7_4:61327041-61327060 | Msa1168600:intron | 55.0% |
| GCTGTGATCGTACCACGAAG+TGG | + | chr7_4:61327799-61327818 | Msa1168600:intron | 55.0% | |
| CGTGGTACGATCACAGCTTC+AGG | - | chr7_4:61327802-61327821 | Msa1168620:CDS | 55.0% | |
| !! | AACGGAACAGCCGTTGGTTC+CGG | - | chr7_4:61327991-61328010 | Msa1168620:CDS | 55.0% |
| CAGCCTCAATTTGACCAGGG+TGG | + | chr7_4:61328146-61328165 | Msa1168600:intron | 55.0% | |
| GCAGCAGCCTCAATTTGACC+AGG | + | chr7_4:61328150-61328169 | Msa1168600:intron | 55.0% | |
| ! | CGTTTGGCACTCGCATCGAT+TGG | - | chr7_4:61328450-61328469 | Msa1168620:intron | 55.0% |
| CTTTGGACGTGGGTCGTAAC+CGG | + | chr7_4:61328639-61328658 | Msa1168600:intron | 55.0% | |
| GCAAGGTCCGCATATGAGAG+TGG | - | chr7_4:61329122-61329141 | Msa1168620:CDS | 55.0% | |
| GAATTGGGGTGTGGCAGCTG+AGG | - | chr7_4:61326762-61326781 | Msa1168620:CDS | 60.0% | |
| ACAGCTCCACCTGCACACCA+TGG | + | chr7_4:61326909-61326928 | Msa1168600:intron | 60.0% | |
| CTCCATCACCCAGTCACTGC+TGG | + | chr7_4:61326959-61326978 | Msa1168600:intron | 60.0% | |
| !! | TACGGTGTCACCACCGGGTT+CGG | - | chr7_4:61327003-61327022 | Msa1168620:CDS | 60.0% |
| TTGTTTGGTACGGCGGTGCG+AGG | + | chr7_4:61327034-61327053 | Msa1168600:intron | 60.0% | |
| TCGCACCGCCGTACCAAACA+AGG | - | chr7_4:61327033-61327052 | Msa1168620:CDS | 60.0% | |
| CACCGCCGTACCAAACAAGG+TGG | - | chr7_4:61327036-61327055 | Msa1168620:CDS | 60.0% | |
| GCTGCTCTTGTTGCCGTGTG+TGG | + | chr7_4:61327670-61327689 | Msa1168600:intron | 60.0% | |
| CTGCTCGGCACTTTGGACGT+GGG | + | chr7_4:61328649-61328668 | Msa1168600:intron | 60.0% | |
| ! | GGTTGTGCTGCTCGGCACTT+TGG | + | chr7_4:61328656-61328675 | Msa1168600:intron | 60.0% |
| !! | GGTGGAGGAGTACCGGAAGC+CGG | - | chr7_4:61326822-61326841 | Msa1168620:CDS | 65.0% |
| !! | CAAGACGGACCACCGGCTTC+CGG | + | chr7_4:61326837-61326856 | Msa1168600:intron | 65.0% |
| AAGCCGGTGGTCCGTCTTGG+TGG | - | chr7_4:61326838-61326857 | Msa1168620:CDS | 65.0% | |
| TCGCCACCAAGACGGACCAC+CGG | + | chr7_4:61326844-61326863 | Msa1168600:intron | 65.0% | |
| GGCCAGCAGTGACTGGGTGA+TGG | - | chr7_4:61326954-61326973 | Msa1168620:CDS | 65.0% | |
| TTTGGTACGGCGGTGCGAGG+TGG | + | chr7_4:61327031-61327050 | Msa1168600:intron | 65.0% | |
| GCTGCTCGGCACTTTGGACG+TGG | + | chr7_4:61328650-61328669 | Msa1168600:intron | 65.0% | |
| !! | GGAGGAGTACCGGAAGCCGG+TGG | - | chr7_4:61326825-61326844 | Msa1168620:CDS | 70.0% |
| CGGAAGCCGGTGGTCCGTCT+TGG | - | chr7_4:61326835-61326854 | Msa1168620:CDS | 70.0% | |
| ! | GTGCGAGGTGGCGCCGAACC+CGG | + | chr7_4:61327019-61327038 | Msa1168600:intron | 75.0% |
| !! | CGAGGTGGCGCCGAACCCGG+TGG | + | chr7_4:61327016-61327035 | Msa1168600:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 61326658 | 61329364 | 61326658 | ID=Msa1168620;Name=Msa1168620 |
| chr7_4 | mRNA | 61326658 | 61329364 | 61326658 | ID=Msa1168620-mRNA-1;Parent=Msa1168620;Name=Msa1168620-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|2|0|724 |
| chr7_4 | exon | 61328940 | 61329364 | 61328940 | ID=Msa1168620-mRNA-1:exon:19408;Parent=Msa1168620-mRNA-1 |
| chr7_4 | exon | 61326658 | 61328407 | 61326658 | ID=Msa1168620-mRNA-1:exon:19407;Parent=Msa1168620-mRNA-1 |
| chr7_4 | CDS | 61328940 | 61329364 | 61328940 | ID=Msa1168620-mRNA-1:cds;Parent=Msa1168620-mRNA-1 |
| chr7_4 | CDS | 61326658 | 61328407 | 61326658 | ID=Msa1168620-mRNA-1:cds;Parent=Msa1168620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
