Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079400 | XP_039683521.1 | 97.238 | 724 | 20 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079400 | sp|P27990|PALY_MEDSA | 96.414 | 725 | 25 | 1 | 1 | 724 | 1 | 725 | 0.0 | 1441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079400 | A0A396H5D0 | 97.238 | 724 | 20 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1459 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1079360 | Msa1079400 | 0.864287 | 1.355158e-64 | -8.615850e-47 |
| Msa1079390 | Msa1079400 | 0.941636 | 2.947098e-101 | -8.615850e-47 |
| Msa1079400 | Msa1079410 | 0.851513 | 8.454218e-61 | -8.615850e-47 |
| Msa1079400 | Msa1123600 | 0.934829 | 2.199141e-96 | -8.615850e-47 |
| Msa1079400 | Msa1123610 | 0.897963 | 8.443316e-77 | -8.615850e-47 |
| Msa1079400 | Msa1168520 | 0.870079 | 1.912627e-66 | -8.615850e-47 |
| Msa1079400 | Msa1168530 | 0.953449 | 2.675305e-111 | -8.615850e-47 |
| Msa1079400 | Msa1168540 | 0.848797 | 4.874015e-60 | -8.615850e-47 |
| Msa1079400 | Msa1168610 | 0.838264 | 3.188007e-57 | -8.615850e-47 |
| Msa1079400 | Msa1168620 | 0.969678 | 1.779066e-130 | -8.615850e-47 |
| Msa1079400 | Msa1168700 | 0.944017 | 4.210927e-103 | -8.615850e-47 |
| Msa1079400 | Msa1168710 | 0.934464 | 3.878010e-96 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079400 | MtrunA17_Chr7g0264351 | 97.238 | 724 | 20 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1459 |
| Msa1079400 | MtrunA17_Chr7g0264311 | 97.238 | 724 | 20 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1457 |
| Msa1079400 | MtrunA17_Chr7g0264341 | 96.961 | 724 | 22 | 0 | 1 | 724 | 1 | 724 | 0.0 | 1454 |
| Msa1079400 | MtrunA17_Chr1g0181091 | 88.858 | 718 | 72 | 1 | 7 | 724 | 3 | 712 | 0.0 | 1323 |
| Msa1079400 | MtrunA17_Chr1g0199551 | 80.432 | 695 | 136 | 0 | 30 | 724 | 28 | 722 | 0.0 | 1189 |
| Msa1079400 | MtrunA17_Chr5g0448361 | 74.352 | 694 | 176 | 2 | 31 | 723 | 16 | 708 | 0.0 | 1071 |
| Msa1079400 | MtrunA17_Chr2g0326921 | 75.107 | 699 | 170 | 3 | 27 | 723 | 1 | 697 | 0.0 | 1066 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079400 | AT2G37040.1 | 82.203 | 708 | 126 | 0 | 17 | 724 | 18 | 725 | 0.0 | 1238 |
| Msa1079400 | AT3G53260.1 | 82.684 | 693 | 120 | 0 | 32 | 724 | 25 | 717 | 0.0 | 1221 |
| Msa1079400 | AT3G10340.1 | 79.801 | 703 | 140 | 2 | 23 | 724 | 6 | 707 | 0.0 | 1166 |
| Msa1079400 | AT5G04230.1 | 73.420 | 696 | 169 | 6 | 32 | 724 | 12 | 694 | 0.0 | 1037 |
| Msa1079400 | AT5G04230.2 | 73.000 | 700 | 169 | 7 | 32 | 724 | 12 | 698 | 0.0 | 1031 |
Find 182 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTATTATGGAACACATTT+TGG | 0.144231 | 7_2:+78577479 | Msa1079400:CDS |
| TCTCTTTGAGGCTAACATTT+TGG | 0.190344 | 7_2:+78577341 | Msa1079400:CDS |
| TCCAATTCTATCAAAATTCT+AGG | 0.199579 | 7_2:+78575898 | Msa1079400:five_prime_UTR |
| TGATCCTCTTCTTGAATGTT+TGG | 0.214712 | 7_2:+78578619 | Msa1079400:CDS |
| GTCCCTCTGTCTTACATTGC+TGG | 0.215263 | 7_2:+78577144 | Msa1079400:CDS |
| AATTGAGGCTGCTGCTATTA+TGG | 0.231999 | 7_2:+78577467 | Msa1079400:CDS |
| CACACTGCTCCAAGGTTATT+CGG | 0.232317 | 7_2:+78577020 | Msa1079400:CDS |
| CTTGCACTTTCAACCTCTTT+TGG | 0.237913 | 7_2:-78578416 | None:intergenic |
| AGTGCATATCTATCTTGTTT+TGG | 0.256533 | 7_2:-78577561 | None:intergenic |
| ACCACAATGGCTTGGTCCTT+TGG | 0.261854 | 7_2:+78577593 | Msa1079400:CDS |
| TTCCAATTTGTTAACTTTGT+TGG | 0.278628 | 7_2:+78578663 | Msa1079400:exon |
| AGCAATTGATTTAAGACATT+TGG | 0.279595 | 7_2:+78578088 | Msa1079400:CDS |
| CTTTATATAGAGGTTTGTTT+TGG | 0.300397 | 7_2:-78575798 | None:intergenic |
| CTGCAAAGCACCACCTTGTT+TGG | 0.301759 | 7_2:-78576358 | None:intergenic |
| CAACCAAGATGTGAACTCTT+TGG | 0.302868 | 7_2:+78577983 | Msa1079400:CDS |
| AACCAACAAAGTTAACAAAT+TGG | 0.308916 | 7_2:-78578665 | None:intergenic |
| TACCACCACACAACAAATTA+AGG | 0.312706 | 7_2:+78575921 | Msa1079400:five_prime_UTR |
| GTAGATCATGCACTAGTTAA+TGG | 0.316257 | 7_2:+78578317 | Msa1079400:CDS |
| AGAAATCCTAGCTTGGATTA+TGG | 0.318763 | 7_2:+78577864 | Msa1079400:CDS |
| AACGGAACAGCCGTTGGTTC+CGG | 0.342001 | 7_2:+78577303 | Msa1079400:CDS |
| CTGCATCCAATGATCTTGTT+TGG | 0.353952 | 7_2:-78578470 | None:intergenic |
| AACCAAGATGTGAACTCTTT+GGG | 0.363040 | 7_2:+78577984 | Msa1079400:CDS |
| GATCCTCTTCTTGAATGTTT+GGG | 0.364274 | 7_2:+78578620 | Msa1079400:CDS |
| AGCTTCTATTGTTCTCTTTG+AGG | 0.369188 | 7_2:+78577329 | Msa1079400:CDS |
| GGGAATTAGATTTGAAATCT+TGG | 0.372469 | 7_2:+78577041 | Msa1079400:CDS |
| ATGGAGTGACGTTGTTGTTA+AGG | 0.373628 | 7_2:-78577080 | None:intergenic |
| ATGATCTTGTTTGGAATTGT+TGG | 0.375312 | 7_2:-78578461 | None:intergenic |
| TACATTGCTGGATTGCTAAC+CGG | 0.377877 | 7_2:+78577156 | Msa1079400:CDS |
| GATCACAGCTTCAGGAGATT+TGG | 0.382346 | 7_2:+78577122 | Msa1079400:CDS |
| AGTAATTGAGCTTTATATAG+AGG | 0.382678 | 7_2:-78575808 | None:intergenic |
| TTATCCATGGATACTCCAAT+AGG | 0.387124 | 7_2:-78577735 | None:intergenic |
| AAATGATTATGAAATAATAA+AGG | 0.391111 | 7_2:-78575870 | None:intergenic |
| CTACTCGCAGAAAGATTTGA+AGG | 0.395081 | 7_2:-78577843 | None:intergenic |
| GAGTTAAGGCCAGCAGTGAC+TGG | 0.396808 | 7_2:+78576259 | Msa1079400:CDS |
| ATGAAGCTGATCCTTTGAAT+TGG | 0.399923 | 7_2:+78576058 | Msa1079400:CDS |
| TACGGTGTCACCACCGGGTT+CGG | 0.400782 | 7_2:+78576315 | Msa1079400:CDS |
| TCAAAAGATTTCGACCTTTG+AGG | 0.404732 | 7_2:+78578373 | Msa1079400:CDS |
| CTCTGAACATGGGTTGTAAC+CGG | 0.407312 | 7_2:-78577948 | None:intergenic |
| GTTACAATATCTTGCAAATC+CGG | 0.407527 | 7_2:+78577929 | Msa1079400:CDS |
| TTCTTGAATGTTTGGGAGAG+TGG | 0.413240 | 7_2:+78578627 | Msa1079400:CDS |
| GAAGGTCTTGCACTTGTTAA+CGG | 0.415232 | 7_2:+78577285 | Msa1079400:CDS |
| TGAAGCTGATCCTTTGAATT+GGG | 0.415897 | 7_2:+78576059 | Msa1079400:CDS |
| AATCAAGCAGAATGATTCAT+TGG | 0.416820 | 7_2:-78576007 | None:intergenic |
| ACAATTCCAAACAAGATCAT+TGG | 0.419610 | 7_2:+78578464 | Msa1079400:CDS |
| CGTGGTACGATCACAGCTTC+AGG | 0.422509 | 7_2:+78577114 | Msa1079400:CDS |
| CAAGACGGACCACCGGCTTC+CGG | 0.424699 | 7_2:-78576146 | None:intergenic |
| ATCTGCTAGGGATGGAGTTA+AGG | 0.427510 | 7_2:+78576245 | Msa1079400:CDS |
| TAGCTTGGATTATGGTTTCA+AGG | 0.427578 | 7_2:+78577872 | Msa1079400:CDS |
| ACAAGTGCAAGACCTTCTTT+TGG | 0.429300 | 7_2:-78577279 | None:intergenic |
| GTCAAATGATCGGTAAATTC+AGG | 0.429420 | 7_2:-78577417 | None:intergenic |
| TGATCTTGTTTGGAATTGTT+GGG | 0.432172 | 7_2:-78578460 | None:intergenic |
| AGCTTTAGAATTTGATCGTC+CGG | 0.432653 | 7_2:-78577175 | None:intergenic |
| AATGTTTGGGAGAGTGGAAT+GGG | 0.434649 | 7_2:+78578633 | Msa1079400:CDS |
| CTAGGAACTGGTTTACTAAC+CGG | 0.436001 | 7_2:+78578527 | Msa1079400:CDS |
| TATCCATGGATACTCCAATA+GGG | 0.436618 | 7_2:-78577734 | None:intergenic |
| GAGAACAATAGAAGCTAAAC+CGG | 0.444891 | 7_2:-78577322 | None:intergenic |
| CGGAAGCCGGTGGTCCGTCT+TGG | 0.445172 | 7_2:+78576147 | Msa1079400:CDS |
| ATATTGTAACTCAGAACAAT+AGG | 0.445191 | 7_2:-78577916 | None:intergenic |
| AATTACTTCCTTCTCATCTC+AGG | 0.446155 | 7_2:+78575824 | Msa1079400:five_prime_UTR |
| GTGCGAGGTGGCGCCGAACC+CGG | 0.448163 | 7_2:-78576328 | None:intergenic |
| AATGTCTTAAATCAATTGCT+TGG | 0.454815 | 7_2:-78578085 | None:intergenic |
| GTTAGAGAGGAGCTAGGAAC+TGG | 0.457195 | 7_2:+78578515 | Msa1079400:CDS |
| CTCCATCACCCAGTCACTGC+TGG | 0.457530 | 7_2:-78576268 | None:intergenic |
| ATCCATGGATAATACACGTT+TGG | 0.459440 | 7_2:+78577746 | Msa1079400:CDS |
| ACTTGTTGAAAGTGGTTGAC+AGG | 0.460419 | 7_2:+78578219 | Msa1079400:CDS |
| AATTGATTTAAGACATTTGG+AGG | 0.465528 | 7_2:+78578091 | Msa1079400:CDS |
| GTTGCTCAGCACTCTGAACA+TGG | 0.466921 | 7_2:-78577959 | None:intergenic |
| TCTCTAACAAACTTGTAAAG+TGG | 0.467647 | 7_2:-78578500 | None:intergenic |
| ACTCTTACCATGGGTGTCAA+TGG | 0.467649 | 7_2:+78578164 | Msa1079400:CDS |
| AAGCCGGTGGTCCGTCTTGG+TGG | 0.472146 | 7_2:+78576150 | Msa1079400:CDS |
| TTCTTGAAACATCGATCAAA+GGG | 0.473840 | 7_2:-78577677 | None:intergenic |
| TTTGAATTACAACCAAAAGA+AGG | 0.477960 | 7_2:+78577267 | Msa1079400:CDS |
| ACACTGCTCCAAGGTTATTC+GGG | 0.483941 | 7_2:+78577021 | Msa1079400:CDS |
| TGCGAGTAGAAATCCTAGCT+TGG | 0.486374 | 7_2:+78577857 | Msa1079400:CDS |
| AACCCAAAGAGTTCACATCT+TGG | 0.486755 | 7_2:-78577986 | None:intergenic |
| ACTAGCATCAACTAAGATCA+TGG | 0.488130 | 7_2:+78575951 | Msa1079400:exon |
| GACAGTTACGGTGTCACCAC+CGG | 0.492715 | 7_2:+78576309 | Msa1079400:CDS |
| AATGCTGGAATATTTGGAAA+CGG | 0.493618 | 7_2:+78576934 | Msa1079400:CDS |
| TCTAAAGCTCATGGACCATC+CGG | 0.493757 | 7_2:+78577189 | Msa1079400:CDS |
| TTTCTTGAAACATCGATCAA+AGG | 0.494354 | 7_2:-78577678 | None:intergenic |
| ATCTAATTCCCGAATAACCT+TGG | 0.497406 | 7_2:-78577029 | None:intergenic |
| CGAGACACTGACGATTTCTC+AGG | 0.498607 | 7_2:+78576173 | Msa1079400:CDS |
| AAATGTCATTTCACCGGGTG+AGG | 0.499354 | 7_2:+78578553 | Msa1079400:CDS |
| AGCTTGGATTATGGTTTCAA+GGG | 0.499976 | 7_2:+78577873 | Msa1079400:CDS |
| ACTCCATGTTTACCACTTCG+TGG | 0.503596 | 7_2:+78577096 | Msa1079400:CDS |
| GAATGTTTGGGAGAGTGGAA+TGG | 0.503684 | 7_2:+78578632 | Msa1079400:CDS |
| TGCACATGACCATGGTGTGC+AGG | 0.506601 | 7_2:+78576209 | Msa1079400:CDS |
| GTGAATTTCCTGAGATGAGA+AGG | 0.509983 | 7_2:-78575832 | None:intergenic |
| CTTTGCAGAAAGAACTCATA+AGG | 0.510191 | 7_2:+78576373 | Msa1079400:CDS |
| AGCGTATGGTGGAGGAGTAC+CGG | 0.511195 | 7_2:+78576127 | Msa1079400:CDS |
| CGATCAAATTCTAAAGCTCA+TGG | 0.519333 | 7_2:+78577180 | Msa1079400:CDS |
| GCATTAAGTATTTCTCCGGA+TGG | 0.520440 | 7_2:-78577204 | None:intergenic |
| AACAAAGGCACGGACAGTTA+CGG | 0.520670 | 7_2:+78576297 | Msa1079400:CDS |
| GAAGACCCTCTTGCCAAAAG+AGG | 0.521788 | 7_2:+78578403 | Msa1079400:CDS |
| AACCCCTATTGGAGTATCCA+TGG | 0.530273 | 7_2:+78577731 | Msa1079400:CDS |
| CGGAGAAAATGTCATTTCAC+CGG | 0.530856 | 7_2:+78578547 | Msa1079400:CDS |
| TGGAGCTGTCTGAATCTGCT+AGG | 0.530940 | 7_2:+78576232 | Msa1079400:CDS |
| CGTTTGGCACTCGCATCGAT+TGG | 0.531219 | 7_2:+78577762 | Msa1079400:CDS |
| CAAGGGATCTGAAATTGCCA+TGG | 0.533499 | 7_2:+78577890 | Msa1079400:CDS |
| CAACTTGTGTGTCAAATGAT+CGG | 0.535020 | 7_2:-78577427 | None:intergenic |
| AAGTTTGTTAGAGAGGAGCT+AGG | 0.538179 | 7_2:+78578509 | Msa1079400:CDS |
| GGCCAGCAGTGACTGGGTGA+TGG | 0.539190 | 7_2:+78576266 | Msa1079400:CDS |
| CAAAGTTAACAAATTGGAAG+AGG | 0.539814 | 7_2:-78578659 | None:intergenic |
| ACCATGGTCATGTGCAGCAA+TGG | 0.541335 | 7_2:-78576202 | None:intergenic |
| TGCCAAACGTGTATTATCCA+TGG | 0.541802 | 7_2:-78577748 | None:intergenic |
| AGAACTTCACCACAATGGCT+TGG | 0.541972 | 7_2:+78577585 | Msa1079400:CDS |
| ACTTTACAAGTTTGTTAGAG+AGG | 0.544419 | 7_2:+78578502 | Msa1079400:CDS |
| CTCAGAACAATAGGAAGCCA+TGG | 0.547791 | 7_2:-78577907 | None:intergenic |
| AAGTTCCTTAATTTGTTGTG+TGG | 0.551218 | 7_2:-78575926 | None:intergenic |
| GTTGTTAAGGAGCTTAGTGA+TGG | 0.555678 | 7_2:-78577067 | None:intergenic |
| TTGAAACCATAATCCAAGCT+AGG | 0.555782 | 7_2:-78577870 | None:intergenic |
| GATCTCTCTCTCAATTGACT+TGG | 0.558820 | 7_2:-78577637 | None:intergenic |
| TCAAGAAACAAAGCTTTGCA+TGG | 0.562486 | 7_2:+78577693 | Msa1079400:CDS |
| AAGCACCACCTTGTTTGGTA+CGG | 0.564097 | 7_2:-78576353 | None:intergenic |
| GGTGGAGGAGTACCGGAAGC+CGG | 0.566790 | 7_2:+78576134 | Msa1079400:CDS |
| CTGTCTGAATCTGCTAGGGA+TGG | 0.567492 | 7_2:+78576237 | Msa1079400:CDS |
| AAAGGGTATGTAGCGCTACA+AGG | 0.571765 | 7_2:-78578269 | None:intergenic |
| CAAACAAGATCATTGGATGC+AGG | 0.571877 | 7_2:+78578471 | Msa1079400:CDS |
| ACACCACCCTGGTCAAATTG+AGG | 0.572511 | 7_2:+78577452 | Msa1079400:CDS |
| GCTGCTCTTGTTGCCGTGTG+TGG | 0.574124 | 7_2:-78576979 | None:intergenic |
| CTTGTTGAAAGTGGTTGACA+GGG | 0.574600 | 7_2:+78578220 | Msa1079400:CDS |
| GCAGCAGCCTCAATTTGACC+AGG | 0.576243 | 7_2:-78577459 | None:intergenic |
| TTCCTTAATTTGTTGTGTGG+TGG | 0.576332 | 7_2:-78575923 | None:intergenic |
| TTTGGTACGGCGGTGCGAGG+TGG | 0.578567 | 7_2:-78576340 | None:intergenic |
| GCTGCCACACCCCAATTCAA+AGG | 0.581598 | 7_2:-78576069 | None:intergenic |
| TCGCCACCAAGACGGACCAC+CGG | 0.582161 | 7_2:-78576153 | None:intergenic |
| TCGCACCGCCGTACCAAACA+AGG | 0.582783 | 7_2:+78576345 | Msa1079400:CDS |
| CATGAGCTGAAGGATCTCAA+TGG | 0.583537 | 7_2:-78578036 | None:intergenic |
| TGAGGTGAAGCGTATGGTGG+AGG | 0.584737 | 7_2:+78576119 | Msa1079400:CDS |
| GCCATTGCTGCACATGACCA+TGG | 0.585263 | 7_2:+78576201 | Msa1079400:CDS |
| ACCAAAGGACCAAGCCATTG+TGG | 0.586572 | 7_2:-78577594 | None:intergenic |
| TGATCCTTTGAATTGGGGTG+TGG | 0.587095 | 7_2:+78576065 | Msa1079400:CDS |
| AGGTGGAAGACATGAGCTGA+AGG | 0.588332 | 7_2:-78578046 | None:intergenic |
| GTGGCAGCTGAGGCAATGAA+AGG | 0.593497 | 7_2:+78576084 | Msa1079400:CDS |
| TCTCCCAAACATTCAAGAAG+AGG | 0.593567 | 7_2:-78578623 | None:intergenic |
| CAAAAGAGGTTGAAAGTGCA+AGG | 0.594086 | 7_2:+78578417 | Msa1079400:CDS |
| AGTTAAGGCCAGCAGTGACT+GGG | 0.595378 | 7_2:+78576260 | Msa1079400:CDS |
| AGAAGCTAAACCGGAACCAA+CGG | 0.596171 | 7_2:-78577313 | None:intergenic |
| CACCACCTTGTTTGGTACGG+CGG | 0.598168 | 7_2:-78576350 | None:intergenic |
| CTTGTTAACGGAACAGCCGT+TGG | 0.598411 | 7_2:+78577297 | Msa1079400:CDS |
| TTGTTTGGTACGGCGGTGCG+AGG | 0.600854 | 7_2:-78576343 | None:intergenic |
| GGTCTTCAACTCTTCCTCAA+AGG | 0.602276 | 7_2:-78578387 | None:intergenic |
| AATCTAATCACTTCAACCAA+AGG | 0.605646 | 7_2:-78577609 | None:intergenic |
| CACTTAGAACTTCACCACAA+TGG | 0.606171 | 7_2:+78577580 | Msa1079400:CDS |
| GGAGCTGTCTGAATCTGCTA+GGG | 0.606450 | 7_2:+78576233 | Msa1079400:CDS |
| TGGGTTTCCACTCTCATATG+CGG | 0.607079 | 7_2:-78578441 | None:intergenic |
| GCAAAGTGCAATCAAGAAGG+TGG | 0.607328 | 7_2:-78578063 | None:intergenic |
| AGTTTGTCACACTCCTCACC+CGG | 0.607601 | 7_2:-78578566 | None:intergenic |
| ACAGTTACGGTGTCACCACC+GGG | 0.611533 | 7_2:+78576310 | Msa1079400:CDS |
| ATCCATGGATACTCCAATAG+GGG | 0.613815 | 7_2:-78577733 | None:intergenic |
| GAATTGGGGTGTGGCAGCTG+AGG | 0.617765 | 7_2:+78576074 | Msa1079400:CDS |
| TTGGCAAAGTGCAATCAAGA+AGG | 0.618750 | 7_2:-78578066 | None:intergenic |
| AAGTTCTCCATTGACACCCA+TGG | 0.622303 | 7_2:-78578171 | None:intergenic |
| TTGCTCAGCACTCTGAACAT+GGG | 0.623109 | 7_2:-78577958 | None:intergenic |
| AGAAACAAAGCTTTGCATGG+TGG | 0.624866 | 7_2:+78577696 | Msa1079400:CDS |
| GCAAGGTCCGCATATGAGAG+TGG | 0.625862 | 7_2:+78578434 | Msa1079400:CDS |
| ATCCAGCAATGTAAGACAGA+GGG | 0.626529 | 7_2:-78577146 | None:intergenic |
| GACACTGACGATTTCTCAGG+TGG | 0.626830 | 7_2:+78576176 | Msa1079400:CDS |
| CCTTGATGAGGTGAAGCGTA+TGG | 0.628479 | 7_2:+78576113 | Msa1079400:CDS |
| AAGTCACACACTACCACACA+CGG | 0.628536 | 7_2:+78576966 | Msa1079400:CDS |
| GGAGAAAATGTCATTTCACC+GGG | 0.629782 | 7_2:+78578548 | Msa1079400:CDS |
| TATTGCTAATGTGTGTCCTA+AGG | 0.631397 | 7_2:+78578824 | Msa1079400:three_prime_UTR |
| TGTGTTGATTCTCACTAGCA+TGG | 0.632917 | 7_2:-78577001 | None:intergenic |
| AGAATCAACACACTGCTCCA+AGG | 0.635657 | 7_2:+78577012 | Msa1079400:CDS |
| GAAGCTGATCCTTTGAATTG+GGG | 0.639983 | 7_2:+78576060 | Msa1079400:CDS |
| GAAAGGCAGTCACCTTGATG+AGG | 0.642522 | 7_2:+78576101 | Msa1079400:CDS |
| GGAGGAGTACCGGAAGCCGG+TGG | 0.645003 | 7_2:+78576137 | Msa1079400:CDS |
| GTACCACGAAGTGGTAAACA+TGG | 0.652497 | 7_2:-78577099 | None:intergenic |
| CCATACGCTTCACCTCATCA+AGG | 0.653785 | 7_2:-78576113 | None:intergenic |
| GCTGTGATCGTACCACGAAG+TGG | 0.655564 | 7_2:-78577108 | None:intergenic |
| CACAAGTTGAAACACCACCC+TGG | 0.660975 | 7_2:+78577441 | Msa1079400:CDS |
| TGATGAGGTGAAGCGTATGG+TGG | 0.671300 | 7_2:+78576116 | Msa1079400:CDS |
| TCAGTGTCTCGCCACCAAGA+CGG | 0.673504 | 7_2:-78576161 | None:intergenic |
| ATGTTTGGGAGAGTGGAATG+GGG | 0.676280 | 7_2:+78578634 | Msa1079400:CDS |
| GGAGAGTATGAACAAAGGCA+CGG | 0.688439 | 7_2:+78576287 | Msa1079400:CDS |
| CAGCCTCAATTTGACCAGGG+TGG | 0.690386 | 7_2:-78577455 | None:intergenic |
| ACAGCTCCACCTGCACACCA+TGG | 0.693221 | 7_2:-78576218 | None:intergenic |
| ACATGACCATGGTGTGCAGG+TGG | 0.694429 | 7_2:+78576212 | Msa1079400:CDS |
| AATCCAGCAATGTAAGACAG+AGG | 0.700859 | 7_2:-78577147 | None:intergenic |
| CAGCAGCCTCAATTTGACCA+GGG | 0.707184 | 7_2:-78577458 | None:intergenic |
| GTGATGGAGAGTATGAACAA+AGG | 0.730510 | 7_2:+78576282 | Msa1079400:CDS |
| CACCGCCGTACCAAACAAGG+TGG | 0.735748 | 7_2:+78576348 | Msa1079400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAATTTATTTAAAT+TGG | + | chr7_2:78576769-78576788 | Msa1079400:intron | 0.0% |
| !! | AAATGATTATGAAATAATAA+AGG | - | chr7_2:78575873-78575892 | None:intergenic | 10.0% |
| !!! | CTTCTTTTAAAAAAAAAATA+TGG | + | chr7_2:78576809-78576828 | Msa1079400:intron | 10.0% |
| !!! | AAAAATTATCCTTGTTATTT+TGG | + | chr7_2:78576549-78576568 | Msa1079400:intron | 15.0% |
| !!! | AAACTTCTAATTTACTTTTA+TGG | + | chr7_2:78578801-78578820 | Msa1079400:three_prime_UTR | 15.0% |
| !! | ATTAGAAATCCAAAATAACA+AGG | - | chr7_2:78576561-78576580 | None:intergenic | 20.0% |
| !! | AAAAATAAATAAGTCTCCTT+AGG | - | chr7_2:78578843-78578862 | None:intergenic | 20.0% |
| !!! | AGGAGACTTATTTATTTTTT+TGG | + | chr7_2:78578844-78578863 | Msa1079400:three_prime_UTR | 20.0% |
| !!! | CTTTATATAGAGGTTTGTTT+TGG | - | chr7_2:78575801-78575820 | None:intergenic | 25.0% |
| !! | AGTAATTGAGCTTTATATAG+AGG | - | chr7_2:78575811-78575830 | None:intergenic | 25.0% |
| ! | TCCAATTCTATCAAAATTCT+AGG | + | chr7_2:78575898-78575917 | Msa1079400:five_prime_UTR | 25.0% |
| !!! | ACCTAGAATTTTGATAGAAT+TGG | - | chr7_2:78575902-78575921 | None:intergenic | 25.0% |
| !!! | TCCTTATAGTACTTTTTTCT+TGG | + | chr7_2:78576429-78576448 | Msa1079400:intron | 25.0% |
| !!! | TCCAAGAAAAAAGTACTATA+AGG | - | chr7_2:78576433-78576452 | None:intergenic | 25.0% |
| !!! | TACTTTGAAATGAAAACAAG+TGG | + | chr7_2:78576685-78576704 | Msa1079400:intron | 25.0% |
| ! | ATTATTGTATTGAGAGATAG+TGG | - | chr7_2:78576724-78576743 | None:intergenic | 25.0% |
| ! | ATCTCTCAATACAATAATAC+AGG | + | chr7_2:78576726-78576745 | Msa1079400:intron | 25.0% |
| !!! | GCTACTTAATTCTTGTTTTT+AGG | + | chr7_2:78576905-78576924 | Msa1079400:intron | 25.0% |
| !! | TTTTTGAATGCTGGAATATT+TGG | + | chr7_2:78576928-78576947 | Msa1079400:CDS | 25.0% |
| !! | TTTTGCATTAAGTATTTCTC+CGG | - | chr7_2:78577211-78577230 | None:intergenic | 25.0% |
| ! | TTTGAATTACAACCAAAAGA+AGG | + | chr7_2:78577267-78577286 | Msa1079400:CDS | 25.0% |
| !! | GTCAATGATTTTTACAACAA+TGG | + | chr7_2:78577816-78577835 | Msa1079400:CDS | 25.0% |
| ! | ATATTGTAACTCAGAACAAT+AGG | - | chr7_2:78577919-78577938 | None:intergenic | 25.0% |
| ! | AATGTCTTAAATCAATTGCT+TGG | - | chr7_2:78578088-78578107 | None:intergenic | 25.0% |
| !! | AGCAATTGATTTAAGACATT+TGG | + | chr7_2:78578088-78578107 | Msa1079400:CDS | 25.0% |
| !! | AATTGATTTAAGACATTTGG+AGG | + | chr7_2:78578091-78578110 | Msa1079400:CDS | 25.0% |
| !!! | TTCCAATTTGTTAACTTTGT+TGG | + | chr7_2:78578663-78578682 | Msa1079400:exon | 25.0% |
| ! | AACCAACAAAGTTAACAAAT+TGG | - | chr7_2:78578668-78578687 | None:intergenic | 25.0% |
| !!! | TATATAGAGGTTTGTTTTGG+AGG | - | chr7_2:78575798-78575817 | None:intergenic | 30.0% |
| !! | AAGTTCCTTAATTTGTTGTG+TGG | - | chr7_2:78575929-78575948 | None:intergenic | 30.0% |
| AATCAAGCAGAATGATTCAT+TGG | - | chr7_2:78576010-78576029 | None:intergenic | 30.0% | |
| TTGAAATGAAAACAAGTGGT+AGG | + | chr7_2:78576689-78576708 | Msa1079400:intron | 30.0% | |
| TGAAATGAAAACAAGTGGTA+GGG | + | chr7_2:78576690-78576709 | Msa1079400:intron | 30.0% | |
| CAATACAATAATACAGGTGT+AGG | + | chr7_2:78576732-78576751 | Msa1079400:intron | 30.0% | |
| !!! | GTTTTTAGGTTTTTGAATGC+TGG | + | chr7_2:78576919-78576938 | Msa1079400:intron | 30.0% |
| AATGCTGGAATATTTGGAAA+CGG | + | chr7_2:78576934-78576953 | Msa1079400:CDS | 30.0% | |
| ! | GGGAATTAGATTTGAAATCT+TGG | + | chr7_2:78577041-78577060 | Msa1079400:CDS | 30.0% |
| ! | ATTTTTGCTGAAGTTATGCA+AGG | + | chr7_2:78577390-78577409 | Msa1079400:CDS | 30.0% |
| ! | TTTTTGCTGAAGTTATGCAA+GGG | + | chr7_2:78577391-78577410 | Msa1079400:CDS | 30.0% |
| ! | TGCTATTATGGAACACATTT+TGG | + | chr7_2:78577479-78577498 | Msa1079400:CDS | 30.0% |
| ! | ATTATGGAACACATTTTGGA+CGG | + | chr7_2:78577483-78577502 | Msa1079400:CDS | 30.0% |
| !! | AGTGCATATCTATCTTGTTT+TGG | - | chr7_2:78577564-78577583 | None:intergenic | 30.0% |
| AATCTAATCACTTCAACCAA+AGG | - | chr7_2:78577612-78577631 | None:intergenic | 30.0% | |
| TTCTTGAAACATCGATCAAA+GGG | - | chr7_2:78577680-78577699 | None:intergenic | 30.0% | |
| TTTCTTGAAACATCGATCAA+AGG | - | chr7_2:78577681-78577700 | None:intergenic | 30.0% | |
| GTTACAATATCTTGCAAATC+CGG | + | chr7_2:78577929-78577948 | Msa1079400:CDS | 30.0% | |
| !! | CTTTTTCACAGAATCTTGAA+GGG | - | chr7_2:78578199-78578218 | None:intergenic | 30.0% |
| !! | TCTTTTTCACAGAATCTTGA+AGG | - | chr7_2:78578200-78578219 | None:intergenic | 30.0% |
| !! | TGAAAAAGACTTGTTGAAAG+TGG | + | chr7_2:78578211-78578230 | Msa1079400:CDS | 30.0% |
| ! | TGATCTTGTTTGGAATTGTT+GGG | - | chr7_2:78578463-78578482 | None:intergenic | 30.0% |
| ! | ATGATCTTGTTTGGAATTGT+TGG | - | chr7_2:78578464-78578483 | None:intergenic | 30.0% |
| ACAATTCCAAACAAGATCAT+TGG | + | chr7_2:78578464-78578483 | Msa1079400:CDS | 30.0% | |
| TCTCTAACAAACTTGTAAAG+TGG | - | chr7_2:78578503-78578522 | None:intergenic | 30.0% | |
| !! | ACTTTACAAGTTTGTTAGAG+AGG | + | chr7_2:78578502-78578521 | Msa1079400:CDS | 30.0% |
| CAAAGTTAACAAATTGGAAG+AGG | - | chr7_2:78578662-78578681 | None:intergenic | 30.0% | |
| AATTACTTCCTTCTCATCTC+AGG | + | chr7_2:78575824-78575843 | Msa1079400:five_prime_UTR | 35.0% | |
| TACCACCACACAACAAATTA+AGG | + | chr7_2:78575921-78575940 | Msa1079400:five_prime_UTR | 35.0% | |
| !! | TTCCTTAATTTGTTGTGTGG+TGG | - | chr7_2:78575926-78575945 | None:intergenic | 35.0% |
| ACTAGCATCAACTAAGATCA+TGG | + | chr7_2:78575951-78575970 | Msa1079400:exon | 35.0% | |
| ATGAAGCTGATCCTTTGAAT+TGG | + | chr7_2:78576058-78576077 | Msa1079400:CDS | 35.0% | |
| TGAAGCTGATCCTTTGAATT+GGG | + | chr7_2:78576059-78576078 | Msa1079400:CDS | 35.0% | |
| CTTTGCAGAAAGAACTCATA+AGG | + | chr7_2:78576373-78576392 | Msa1079400:CDS | 35.0% | |
| ATCTAATTCCCGAATAACCT+TGG | - | chr7_2:78577032-78577051 | None:intergenic | 35.0% | |
| !! | AGCTTTAGAATTTGATCGTC+CGG | - | chr7_2:78577178-78577197 | None:intergenic | 35.0% |
| !! | CGATCAAATTCTAAAGCTCA+TGG | + | chr7_2:78577180-78577199 | Msa1079400:CDS | 35.0% |
| ! | AAAGAAGCTTTTCAATCTGC+TGG | + | chr7_2:78577228-78577247 | Msa1079400:CDS | 35.0% |
| GAGAACAATAGAAGCTAAAC+CGG | - | chr7_2:78577325-78577344 | None:intergenic | 35.0% | |
| AGCTTCTATTGTTCTCTTTG+AGG | + | chr7_2:78577329-78577348 | Msa1079400:CDS | 35.0% | |
| !!! | TCTCTTTGAGGCTAACATTT+TGG | + | chr7_2:78577341-78577360 | Msa1079400:CDS | 35.0% |
| GTCAAATGATCGGTAAATTC+AGG | - | chr7_2:78577420-78577439 | None:intergenic | 35.0% | |
| CAACTTGTGTGTCAAATGAT+CGG | - | chr7_2:78577430-78577449 | None:intergenic | 35.0% | |
| TCAAGAAACAAAGCTTTGCA+TGG | + | chr7_2:78577693-78577712 | Msa1079400:CDS | 35.0% | |
| !! | TTGCATGGTGGAAATTTTCA+AGG | + | chr7_2:78577708-78577727 | Msa1079400:CDS | 35.0% |
| !! | AATTTTCAAGGAACCCCTAT+TGG | + | chr7_2:78577720-78577739 | Msa1079400:CDS | 35.0% |
| TATCCATGGATACTCCAATA+GGG | - | chr7_2:78577737-78577756 | None:intergenic | 35.0% | |
| TTATCCATGGATACTCCAAT+AGG | - | chr7_2:78577738-78577757 | None:intergenic | 35.0% | |
| ATCCATGGATAATACACGTT+TGG | + | chr7_2:78577746-78577765 | Msa1079400:CDS | 35.0% | |
| AGAAATCCTAGCTTGGATTA+TGG | + | chr7_2:78577864-78577883 | Msa1079400:CDS | 35.0% | |
| TTGAAACCATAATCCAAGCT+AGG | - | chr7_2:78577873-78577892 | None:intergenic | 35.0% | |
| TAGCTTGGATTATGGTTTCA+AGG | + | chr7_2:78577872-78577891 | Msa1079400:CDS | 35.0% | |
| AGCTTGGATTATGGTTTCAA+GGG | + | chr7_2:78577873-78577892 | Msa1079400:CDS | 35.0% | |
| AACCAAGATGTGAACTCTTT+GGG | + | chr7_2:78577984-78578003 | Msa1079400:CDS | 35.0% | |
| !! | CTTTTTGGCAACTTGACTTA+CGG | - | chr7_2:78578144-78578163 | None:intergenic | 35.0% |
| GTAGATCATGCACTAGTTAA+TGG | + | chr7_2:78578317-78578336 | Msa1079400:CDS | 35.0% | |
| TCAAAAGATTTCGACCTTTG+AGG | + | chr7_2:78578373-78578392 | Msa1079400:CDS | 35.0% | |
| ! | CTATTTTCAGCTATGTGTCA+TGG | + | chr7_2:78578587-78578606 | Msa1079400:CDS | 35.0% |
| TGATCCTCTTCTTGAATGTT+TGG | + | chr7_2:78578619-78578638 | Msa1079400:CDS | 35.0% | |
| GATCCTCTTCTTGAATGTTT+GGG | + | chr7_2:78578620-78578639 | Msa1079400:CDS | 35.0% | |
| TATTGCTAATGTGTGTCCTA+AGG | + | chr7_2:78578824-78578843 | Msa1079400:three_prime_UTR | 35.0% | |
| GTGAATTTCCTGAGATGAGA+AGG | - | chr7_2:78575835-78575854 | None:intergenic | 40.0% | |
| GAAGCTGATCCTTTGAATTG+GGG | + | chr7_2:78576060-78576079 | Msa1079400:CDS | 40.0% | |
| ! | GTGATGGAGAGTATGAACAA+AGG | + | chr7_2:78576282-78576301 | Msa1079400:CDS | 40.0% |
| !! | TGTGTTGATTCTCACTAGCA+TGG | - | chr7_2:78577004-78577023 | None:intergenic | 40.0% |
| GTTGTTAAGGAGCTTAGTGA+TGG | - | chr7_2:78577070-78577089 | None:intergenic | 40.0% | |
| ! | ATGGAGTGACGTTGTTGTTA+AGG | - | chr7_2:78577083-78577102 | None:intergenic | 40.0% |
| ATCCAGCAATGTAAGACAGA+GGG | - | chr7_2:78577149-78577168 | None:intergenic | 40.0% | |
| AATCCAGCAATGTAAGACAG+AGG | - | chr7_2:78577150-78577169 | None:intergenic | 40.0% | |
| TACATTGCTGGATTGCTAAC+CGG | + | chr7_2:78577156-78577175 | Msa1079400:CDS | 40.0% | |
| GCATTAAGTATTTCTCCGGA+TGG | - | chr7_2:78577207-78577226 | None:intergenic | 40.0% | |
| ! | ACAAGTGCAAGACCTTCTTT+TGG | - | chr7_2:78577282-78577301 | None:intergenic | 40.0% |
| ! | GAAGGTCTTGCACTTGTTAA+CGG | + | chr7_2:78577285-78577304 | Msa1079400:CDS | 40.0% |
| AATTGAGGCTGCTGCTATTA+TGG | + | chr7_2:78577467-78577486 | Msa1079400:CDS | 40.0% | |
| !!! | TCTTGTTTTGGCTTCTGCAA+AGG | - | chr7_2:78577552-78577571 | None:intergenic | 40.0% |
| CACTTAGAACTTCACCACAA+TGG | + | chr7_2:78577580-78577599 | Msa1079400:CDS | 40.0% | |
| GATCTCTCTCTCAATTGACT+TGG | - | chr7_2:78577640-78577659 | None:intergenic | 40.0% | |
| AGAAACAAAGCTTTGCATGG+TGG | + | chr7_2:78577696-78577715 | Msa1079400:CDS | 40.0% | |
| ATCCATGGATACTCCAATAG+GGG | - | chr7_2:78577736-78577755 | None:intergenic | 40.0% | |
| TGCCAAACGTGTATTATCCA+TGG | - | chr7_2:78577751-78577770 | None:intergenic | 40.0% | |
| CTACTCGCAGAAAGATTTGA+AGG | - | chr7_2:78577846-78577865 | None:intergenic | 40.0% | |
| CAACCAAGATGTGAACTCTT+TGG | + | chr7_2:78577983-78578002 | Msa1079400:CDS | 40.0% | |
| AACCCAAAGAGTTCACATCT+TGG | - | chr7_2:78577989-78578008 | None:intergenic | 40.0% | |
| TTGGCAAAGTGCAATCAAGA+AGG | - | chr7_2:78578069-78578088 | None:intergenic | 40.0% | |
| TGCCAAAAAGACTCTTACCA+TGG | + | chr7_2:78578154-78578173 | Msa1079400:CDS | 40.0% | |
| GCCAAAAAGACTCTTACCAT+GGG | + | chr7_2:78578155-78578174 | Msa1079400:CDS | 40.0% | |
| ! | ACCCATGGTAAGAGTCTTTT+TGG | - | chr7_2:78578159-78578178 | None:intergenic | 40.0% |
| ! | ACTTGTTGAAAGTGGTTGAC+AGG | + | chr7_2:78578219-78578238 | Msa1079400:CDS | 40.0% |
| CTTGTTGAAAGTGGTTGACA+GGG | + | chr7_2:78578220-78578239 | Msa1079400:CDS | 40.0% | |
| ACCCTTTGAGTCAAAAACTC+AGG | + | chr7_2:78578285-78578304 | Msa1079400:CDS | 40.0% | |
| !! | GCCTGAGTTTTTGACTCAAA+GGG | - | chr7_2:78578289-78578308 | None:intergenic | 40.0% |
| !! | TGCCTGAGTTTTTGACTCAA+AGG | - | chr7_2:78578290-78578309 | None:intergenic | 40.0% |
| TCAAAAACTCAGGCAAGTGT+TGG | + | chr7_2:78578295-78578314 | Msa1079400:CDS | 40.0% | |
| ! | TTCAACCTCTTTTGGCAAGA+GGG | - | chr7_2:78578411-78578430 | None:intergenic | 40.0% |
| ! | TTTCAACCTCTTTTGGCAAG+AGG | - | chr7_2:78578412-78578431 | None:intergenic | 40.0% |
| ! | CTTGCACTTTCAACCTCTTT+TGG | - | chr7_2:78578419-78578438 | None:intergenic | 40.0% |
| ! | CAAAAGAGGTTGAAAGTGCA+AGG | + | chr7_2:78578417-78578436 | Msa1079400:CDS | 40.0% |
| CTGCATCCAATGATCTTGTT+TGG | - | chr7_2:78578473-78578492 | None:intergenic | 40.0% | |
| CAAACAAGATCATTGGATGC+AGG | + | chr7_2:78578471-78578490 | Msa1079400:CDS | 40.0% | |
| !! | AAGTTTGTTAGAGAGGAGCT+AGG | + | chr7_2:78578509-78578528 | Msa1079400:CDS | 40.0% |
| ! | CTAGGAACTGGTTTACTAAC+CGG | + | chr7_2:78578527-78578546 | Msa1079400:CDS | 40.0% |
| ! | CGGTGAAATGACATTTTCTC+CGG | - | chr7_2:78578549-78578568 | None:intergenic | 40.0% |
| ! | CGGAGAAAATGTCATTTCAC+CGG | + | chr7_2:78578547-78578566 | Msa1079400:CDS | 40.0% |
| ! | GGAGAAAATGTCATTTCACC+GGG | + | chr7_2:78578548-78578567 | Msa1079400:CDS | 40.0% |
| TCTCCCAAACATTCAAGAAG+AGG | - | chr7_2:78578626-78578645 | None:intergenic | 40.0% | |
| TTCTTGAATGTTTGGGAGAG+TGG | + | chr7_2:78578627-78578646 | Msa1079400:CDS | 40.0% | |
| AATGTTTGGGAGAGTGGAAT+GGG | + | chr7_2:78578633-78578652 | Msa1079400:CDS | 40.0% | |
| TGATCCTTTGAATTGGGGTG+TGG | + | chr7_2:78576065-78576084 | Msa1079400:CDS | 45.0% | |
| ATCTGCTAGGGATGGAGTTA+AGG | + | chr7_2:78576245-78576264 | Msa1079400:CDS | 45.0% | |
| ! | GGAGAGTATGAACAAAGGCA+CGG | + | chr7_2:78576287-78576306 | Msa1079400:CDS | 45.0% |
| ! | AACAAAGGCACGGACAGTTA+CGG | + | chr7_2:78576297-78576316 | Msa1079400:CDS | 45.0% |
| ! | AAGCACCACCTTGTTTGGTA+CGG | - | chr7_2:78576356-78576375 | None:intergenic | 45.0% |
| AAGTCACACACTACCACACA+CGG | + | chr7_2:78576966-78576985 | Msa1079400:CDS | 45.0% | |
| AGAATCAACACACTGCTCCA+AGG | + | chr7_2:78577012-78577031 | Msa1079400:CDS | 45.0% | |
| CACACTGCTCCAAGGTTATT+CGG | + | chr7_2:78577020-78577039 | Msa1079400:CDS | 45.0% | |
| ACACTGCTCCAAGGTTATTC+GGG | + | chr7_2:78577021-78577040 | Msa1079400:CDS | 45.0% | |
| ACTCCATGTTTACCACTTCG+TGG | + | chr7_2:78577096-78577115 | Msa1079400:CDS | 45.0% | |
| GTACCACGAAGTGGTAAACA+TGG | - | chr7_2:78577102-78577121 | None:intergenic | 45.0% | |
| GATCACAGCTTCAGGAGATT+TGG | + | chr7_2:78577122-78577141 | Msa1079400:CDS | 45.0% | |
| ! | TCTAAAGCTCATGGACCATC+CGG | + | chr7_2:78577189-78577208 | Msa1079400:CDS | 45.0% |
| AGAAGCTAAACCGGAACCAA+CGG | - | chr7_2:78577316-78577335 | None:intergenic | 45.0% | |
| AGAACTTCACCACAATGGCT+TGG | + | chr7_2:78577585-78577604 | Msa1079400:CDS | 45.0% | |
| ! | AACCCCTATTGGAGTATCCA+TGG | + | chr7_2:78577731-78577750 | Msa1079400:CDS | 45.0% |
| TGCGAGTAGAAATCCTAGCT+TGG | + | chr7_2:78577857-78577876 | Msa1079400:CDS | 45.0% | |
| ! | CAAGGGATCTGAAATTGCCA+TGG | + | chr7_2:78577890-78577909 | Msa1079400:CDS | 45.0% |
| CTCAGAACAATAGGAAGCCA+TGG | - | chr7_2:78577910-78577929 | None:intergenic | 45.0% | |
| ! | CTCTGAACATGGGTTGTAAC+CGG | - | chr7_2:78577951-78577970 | None:intergenic | 45.0% |
| TTGCTCAGCACTCTGAACAT+GGG | - | chr7_2:78577961-78577980 | None:intergenic | 45.0% | |
| CATGAGCTGAAGGATCTCAA+TGG | - | chr7_2:78578039-78578058 | None:intergenic | 45.0% | |
| GCAAAGTGCAATCAAGAAGG+TGG | - | chr7_2:78578066-78578085 | None:intergenic | 45.0% | |
| ACTCTTACCATGGGTGTCAA+TGG | + | chr7_2:78578164-78578183 | Msa1079400:CDS | 45.0% | |
| AAGTTCTCCATTGACACCCA+TGG | - | chr7_2:78578174-78578193 | None:intergenic | 45.0% | |
| ! | AAAGGGTATGTAGCGCTACA+AGG | - | chr7_2:78578272-78578291 | None:intergenic | 45.0% |
| GGTCTTCAACTCTTCCTCAA+AGG | - | chr7_2:78578390-78578409 | None:intergenic | 45.0% | |
| TGGGTTTCCACTCTCATATG+CGG | - | chr7_2:78578444-78578463 | None:intergenic | 45.0% | |
| ! | AAATGTCATTTCACCGGGTG+AGG | + | chr7_2:78578553-78578572 | Msa1079400:CDS | 45.0% |
| GAATGTTTGGGAGAGTGGAA+TGG | + | chr7_2:78578632-78578651 | Msa1079400:CDS | 45.0% | |
| ATGTTTGGGAGAGTGGAATG+GGG | + | chr7_2:78578634-78578653 | Msa1079400:CDS | 45.0% | |
| !! | TTCTTAAATAAAAAAAATAT+GGG | - | chr7_2:78576589-78576608 | None:intergenic | 5.0% |
| !! | ATTCTTAAATAAAAAAAATA+TGG | - | chr7_2:78576590-78576609 | None:intergenic | 5.0% |
| !!! | TAATATTTTAAATCAAATAA+AGG | + | chr7_2:78576622-78576641 | Msa1079400:intron | 5.0% |
| !!! | AAATTTTCAATATTAATTAA+AGG | - | chr7_2:78578753-78578772 | None:intergenic | 5.0% |
| GAAAGGCAGTCACCTTGATG+AGG | + | chr7_2:78576101-78576120 | Msa1079400:CDS | 50.0% | |
| CCATACGCTTCACCTCATCA+AGG | - | chr7_2:78576116-78576135 | None:intergenic | 50.0% | |
| CCTTGATGAGGTGAAGCGTA+TGG | + | chr7_2:78576113-78576132 | Msa1079400:CDS | 50.0% | |
| TGATGAGGTGAAGCGTATGG+TGG | + | chr7_2:78576116-78576135 | Msa1079400:CDS | 50.0% | |
| CGAGACACTGACGATTTCTC+AGG | + | chr7_2:78576173-78576192 | Msa1079400:CDS | 50.0% | |
| GACACTGACGATTTCTCAGG+TGG | + | chr7_2:78576176-78576195 | Msa1079400:CDS | 50.0% | |
| ACCATGGTCATGTGCAGCAA+TGG | - | chr7_2:78576205-78576224 | None:intergenic | 50.0% | |
| TGGAGCTGTCTGAATCTGCT+AGG | + | chr7_2:78576232-78576251 | Msa1079400:CDS | 50.0% | |
| GGAGCTGTCTGAATCTGCTA+GGG | + | chr7_2:78576233-78576252 | Msa1079400:CDS | 50.0% | |
| CTGTCTGAATCTGCTAGGGA+TGG | + | chr7_2:78576237-78576256 | Msa1079400:CDS | 50.0% | |
| AGTTAAGGCCAGCAGTGACT+GGG | + | chr7_2:78576260-78576279 | Msa1079400:CDS | 50.0% | |
| ! | CTGCAAAGCACCACCTTGTT+TGG | - | chr7_2:78576361-78576380 | None:intergenic | 50.0% |
| GTCCCTCTGTCTTACATTGC+TGG | + | chr7_2:78577144-78577163 | Msa1079400:CDS | 50.0% | |
| CTTGTTAACGGAACAGCCGT+TGG | + | chr7_2:78577297-78577316 | Msa1079400:CDS | 50.0% | |
| ! | CACAAGTTGAAACACCACCC+TGG | + | chr7_2:78577441-78577460 | Msa1079400:CDS | 50.0% |
| ACACCACCCTGGTCAAATTG+AGG | + | chr7_2:78577452-78577471 | Msa1079400:CDS | 50.0% | |
| CAGCAGCCTCAATTTGACCA+GGG | - | chr7_2:78577461-78577480 | None:intergenic | 50.0% | |
| !! | ACCACAATGGCTTGGTCCTT+TGG | + | chr7_2:78577593-78577612 | Msa1079400:CDS | 50.0% |
| ACCAAAGGACCAAGCCATTG+TGG | - | chr7_2:78577597-78577616 | None:intergenic | 50.0% | |
| GTTGCTCAGCACTCTGAACA+TGG | - | chr7_2:78577962-78577981 | None:intergenic | 50.0% | |
| AGGTGGAAGACATGAGCTGA+AGG | - | chr7_2:78578049-78578068 | None:intergenic | 50.0% | |
| GAAGACCCTCTTGCCAAAAG+AGG | + | chr7_2:78578403-78578422 | Msa1079400:CDS | 50.0% | |
| GTTAGAGAGGAGCTAGGAAC+TGG | + | chr7_2:78578515-78578534 | Msa1079400:CDS | 50.0% | |
| AGTTTGTCACACTCCTCACC+CGG | - | chr7_2:78578569-78578588 | None:intergenic | 50.0% | |
| GCTGCCACACCCCAATTCAA+AGG | - | chr7_2:78576072-78576091 | None:intergenic | 55.0% | |
| GTGGCAGCTGAGGCAATGAA+AGG | + | chr7_2:78576084-78576103 | Msa1079400:CDS | 55.0% | |
| TGAGGTGAAGCGTATGGTGG+AGG | + | chr7_2:78576119-78576138 | Msa1079400:CDS | 55.0% | |
| ! | AGCGTATGGTGGAGGAGTAC+CGG | + | chr7_2:78576127-78576146 | Msa1079400:CDS | 55.0% |
| TCAGTGTCTCGCCACCAAGA+CGG | - | chr7_2:78576164-78576183 | None:intergenic | 55.0% | |
| GCCATTGCTGCACATGACCA+TGG | + | chr7_2:78576201-78576220 | Msa1079400:CDS | 55.0% | |
| TGCACATGACCATGGTGTGC+AGG | + | chr7_2:78576209-78576228 | Msa1079400:CDS | 55.0% | |
| ACATGACCATGGTGTGCAGG+TGG | + | chr7_2:78576212-78576231 | Msa1079400:CDS | 55.0% | |
| GAGTTAAGGCCAGCAGTGAC+TGG | + | chr7_2:78576259-78576278 | Msa1079400:CDS | 55.0% | |
| !! | GACAGTTACGGTGTCACCAC+CGG | + | chr7_2:78576309-78576328 | Msa1079400:CDS | 55.0% |
| !! | ACAGTTACGGTGTCACCACC+GGG | + | chr7_2:78576310-78576329 | Msa1079400:CDS | 55.0% |
| ! | CACCACCTTGTTTGGTACGG+CGG | - | chr7_2:78576353-78576372 | None:intergenic | 55.0% |
| GCTGTGATCGTACCACGAAG+TGG | - | chr7_2:78577111-78577130 | None:intergenic | 55.0% | |
| CGTGGTACGATCACAGCTTC+AGG | + | chr7_2:78577114-78577133 | Msa1079400:CDS | 55.0% | |
| !! | AACGGAACAGCCGTTGGTTC+CGG | + | chr7_2:78577303-78577322 | Msa1079400:CDS | 55.0% |
| CAGCCTCAATTTGACCAGGG+TGG | - | chr7_2:78577458-78577477 | None:intergenic | 55.0% | |
| GCAGCAGCCTCAATTTGACC+AGG | - | chr7_2:78577462-78577481 | None:intergenic | 55.0% | |
| ! | CGTTTGGCACTCGCATCGAT+TGG | + | chr7_2:78577762-78577781 | Msa1079400:CDS | 55.0% |
| GCAAGGTCCGCATATGAGAG+TGG | + | chr7_2:78578434-78578453 | Msa1079400:CDS | 55.0% | |
| GAATTGGGGTGTGGCAGCTG+AGG | + | chr7_2:78576074-78576093 | Msa1079400:CDS | 60.0% | |
| ACAGCTCCACCTGCACACCA+TGG | - | chr7_2:78576221-78576240 | None:intergenic | 60.0% | |
| CTCCATCACCCAGTCACTGC+TGG | - | chr7_2:78576271-78576290 | None:intergenic | 60.0% | |
| !! | TACGGTGTCACCACCGGGTT+CGG | + | chr7_2:78576315-78576334 | Msa1079400:CDS | 60.0% |
| TTGTTTGGTACGGCGGTGCG+AGG | - | chr7_2:78576346-78576365 | None:intergenic | 60.0% | |
| TCGCACCGCCGTACCAAACA+AGG | + | chr7_2:78576345-78576364 | Msa1079400:CDS | 60.0% | |
| CACCGCCGTACCAAACAAGG+TGG | + | chr7_2:78576348-78576367 | Msa1079400:CDS | 60.0% | |
| GCTGCTCTTGTTGCCGTGTG+TGG | - | chr7_2:78576982-78577001 | None:intergenic | 60.0% | |
| !! | GGTGGAGGAGTACCGGAAGC+CGG | + | chr7_2:78576134-78576153 | Msa1079400:CDS | 65.0% |
| !! | CAAGACGGACCACCGGCTTC+CGG | - | chr7_2:78576149-78576168 | None:intergenic | 65.0% |
| AAGCCGGTGGTCCGTCTTGG+TGG | + | chr7_2:78576150-78576169 | Msa1079400:CDS | 65.0% | |
| TCGCCACCAAGACGGACCAC+CGG | - | chr7_2:78576156-78576175 | None:intergenic | 65.0% | |
| GGCCAGCAGTGACTGGGTGA+TGG | + | chr7_2:78576266-78576285 | Msa1079400:CDS | 65.0% | |
| TTTGGTACGGCGGTGCGAGG+TGG | - | chr7_2:78576343-78576362 | None:intergenic | 65.0% | |
| !! | GGAGGAGTACCGGAAGCCGG+TGG | + | chr7_2:78576137-78576156 | Msa1079400:CDS | 70.0% |
| CGGAAGCCGGTGGTCCGTCT+TGG | + | chr7_2:78576147-78576166 | Msa1079400:CDS | 70.0% | |
| ! | GTGCGAGGTGGCGCCGAACC+CGG | - | chr7_2:78576331-78576350 | None:intergenic | 75.0% |
| !! | CGAGGTGGCGCCGAACCCGG+TGG | - | chr7_2:78576328-78576347 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 78575756 | 78578883 | 78575756 | ID=Msa1079400;Name=Msa1079400 |
| chr7_2 | mRNA | 78575756 | 78578883 | 78575756 | ID=Msa1079400-mRNA-1;Parent=Msa1079400;Name=Msa1079400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=214|1|1|1|1|1|2|207|724 |
| chr7_2 | exon | 78575756 | 78576394 | 78575756 | ID=Msa1079400-mRNA-1:exon:19550;Parent=Msa1079400-mRNA-1 |
| chr7_2 | exon | 78576927 | 78578883 | 78576927 | ID=Msa1079400-mRNA-1:exon:19551;Parent=Msa1079400-mRNA-1 |
| chr7_2 | five_prime_UTR | 78575756 | 78575969 | 78575756 | ID=Msa1079400-mRNA-1:five_prime_utr;Parent=Msa1079400-mRNA-1 |
| chr7_2 | CDS | 78575970 | 78576394 | 78575970 | ID=Msa1079400-mRNA-1:cds;Parent=Msa1079400-mRNA-1 |
| chr7_2 | CDS | 78576927 | 78578676 | 78576927 | ID=Msa1079400-mRNA-1:cds;Parent=Msa1079400-mRNA-1 |
| chr7_2 | three_prime_UTR | 78578677 | 78578883 | 78578677 | ID=Msa1079400-mRNA-1:three_prime_utr;Parent=Msa1079400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
