Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178650 | G7L6S0 | 67.500 | 80 | 24 | 1 | 75 | 152 | 194 | 273 | 6.71e-25 | 110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023610 | Msa1178650 | 0.804550 | 2.047342e-49 | -8.615850e-47 |
| Msa0675510 | Msa1178650 | 0.800452 | 1.431608e-48 | -8.615850e-47 |
| Msa0815320 | Msa1178650 | 0.812756 | 3.611405e-51 | -8.615850e-47 |
| Msa0818010 | Msa1178650 | 0.807885 | 4.062379e-50 | -8.615850e-47 |
| Msa0153200 | Msa1178650 | 0.820887 | 5.409603e-53 | -8.615850e-47 |
| Msa0211680 | Msa1178650 | 0.812186 | 4.812442e-51 | -8.615850e-47 |
| Msa1006250 | Msa1178650 | 0.801910 | 7.203318e-49 | -8.615850e-47 |
| Msa1178650 | Msa1178660 | 0.863229 | 2.890199e-64 | -8.615850e-47 |
| Msa1178650 | Msa1423990 | 0.816740 | 4.731270e-52 | -8.615850e-47 |
| Msa0884920 | Msa1178650 | 0.801993 | 6.926520e-49 | -8.615850e-47 |
| Msa0912500 | Msa1178650 | 0.821773 | 3.379170e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178650 | MtrunA17_Chr8g0343681 | 63.750 | 80 | 27 | 2 | 75 | 152 | 195 | 274 | 2.08e-26 | 103 |
| Msa1178650 | MtrunA17_Chr8g0343631 | 54.348 | 92 | 40 | 1 | 64 | 153 | 170 | 261 | 5.61e-23 | 94.0 |
| Msa1178650 | MtrunA17_Chr8g0343671 | 58.025 | 81 | 32 | 1 | 75 | 153 | 204 | 284 | 3.17e-22 | 92.0 |
| Msa1178650 | MtrunA17_Chr4g0005291 | 53.165 | 79 | 35 | 1 | 77 | 153 | 222 | 300 | 2.24e-21 | 89.4 |
| Msa1178650 | MtrunA17_Chr4g0005391 | 50.633 | 79 | 37 | 1 | 77 | 153 | 212 | 290 | 3.55e-20 | 85.9 |
| Msa1178650 | MtrunA17_Chr8g0343611 | 59.155 | 71 | 27 | 1 | 85 | 153 | 6 | 76 | 1.64e-19 | 84.0 |
| Msa1178650 | MtrunA17_Chr4g0005331 | 50.602 | 83 | 37 | 2 | 75 | 153 | 229 | 311 | 2.34e-17 | 77.8 |
| Msa1178650 | MtrunA17_Chr8g0343581 | 48.276 | 87 | 36 | 3 | 72 | 153 | 209 | 291 | 3.64e-14 | 68.9 |
| Msa1178650 | MtrunA17_Chr3g0102171 | 44.737 | 76 | 40 | 1 | 77 | 150 | 172 | 247 | 6.56e-14 | 68.2 |
| Msa1178650 | MtrunA17_Chr3g0102281 | 44.737 | 76 | 40 | 1 | 77 | 150 | 172 | 247 | 7.35e-14 | 67.8 |
| Msa1178650 | MtrunA17_Chr3g0102251 | 44.304 | 79 | 42 | 1 | 77 | 153 | 172 | 250 | 1.12e-13 | 66.6 |
| Msa1178650 | MtrunA17_Chr2g0298291 | 47.368 | 76 | 35 | 3 | 77 | 148 | 170 | 244 | 1.60e-13 | 67.0 |
| Msa1178650 | MtrunA17_Chr2g0298531 | 46.053 | 76 | 36 | 3 | 77 | 148 | 175 | 249 | 1.14e-12 | 64.3 |
| Msa1178650 | MtrunA17_Chr3g0102121 | 42.169 | 83 | 46 | 1 | 73 | 153 | 168 | 250 | 1.27e-12 | 64.3 |
| Msa1178650 | MtrunA17_Chr3g0102271 | 41.975 | 81 | 44 | 2 | 73 | 150 | 168 | 248 | 5.09e-12 | 62.8 |
| Msa1178650 | MtrunA17_Chr4g0018431 | 43.750 | 80 | 40 | 3 | 73 | 148 | 169 | 247 | 6.79e-12 | 62.4 |
| Msa1178650 | MtrunA17_Chr8g0334511 | 41.379 | 58 | 32 | 1 | 12 | 69 | 106 | 161 | 5.69e-11 | 59.3 |
| Msa1178650 | MtrunA17_Chr7g0242811 | 27.737 | 137 | 81 | 5 | 32 | 153 | 142 | 275 | 5.80e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTCGTGCCATTGGAATT+TGG | 0.185013 | 8_1:+11557121 | Msa1178650:CDS |
| TGCATTGGCGATTCTGATTT+TGG | 0.195077 | 8_1:-11551563 | None:intergenic |
| TGTTCGTGCCATTGGAATTT+GGG | 0.277068 | 8_1:+11557122 | Msa1178650:CDS |
| TCAAATAAAGGCGCACAATC+AGG | 0.307085 | 8_1:+11551663 | Msa1178650:CDS |
| TCAAAAGGACTTGTTGGAAT+TGG | 0.350412 | 8_1:+11557050 | Msa1178650:CDS |
| ATCAGGGAGCTCAGTGAATC+TGG | 0.367103 | 8_1:+11551680 | Msa1178650:CDS |
| CGTGGTCGTGGAAGATCTAA+TGG | 0.395381 | 8_1:+11551528 | Msa1178650:CDS |
| GCTAACTCAAAAGGACTTGT+TGG | 0.403086 | 8_1:+11557044 | Msa1178650:CDS |
| TCAGAAGATGTTCGTGCCAT+TGG | 0.420181 | 8_1:+11557114 | Msa1178650:CDS |
| TATCAGAATAGATCAAATAA+AGG | 0.453076 | 8_1:+11551651 | Msa1178650:CDS |
| CTTGCTACATGGCTATCCTC+CGG | 0.482136 | 8_1:+11551626 | Msa1178650:CDS |
| TTGCTACATGGCTATCCTCC+GGG | 0.505153 | 8_1:+11551627 | Msa1178650:CDS |
| GTTCGTGCCATTGGAATTTG+GGG | 0.505324 | 8_1:+11557123 | Msa1178650:CDS |
| GTGCAACAAGCTAACTCAAA+AGG | 0.505611 | 8_1:+11557035 | Msa1178650:CDS |
| AGATCTAATGGAGGAGGTCG+TGG | 0.515276 | 8_1:+11551540 | Msa1178650:CDS |
| CAAATAAAGGCGCACAATCA+GGG | 0.520794 | 8_1:+11551664 | Msa1178650:CDS |
| AACAATATGTATTCTAATCG+AGG | 0.533892 | 8_1:+11551486 | None:intergenic |
| GGATACAATAATCGTGGTCG+TGG | 0.538930 | 8_1:+11551516 | Msa1178650:CDS |
| ATGTATTCTAATCGAGGGAG+AGG | 0.551316 | 8_1:+11551492 | Msa1178650:CDS |
| TAAATGTGTGTTGATGAGGT+TGG | 0.554918 | 8_1:+11557007 | Msa1178650:CDS |
| GATACTTGTTACTTGCTACA+TGG | 0.557377 | 8_1:+11551615 | Msa1178650:CDS |
| TTGCAGAACAAATGTATGAC+CGG | 0.569855 | 8_1:+11557172 | Msa1178650:CDS |
| TTCTGTGACAATGAGTGCAT+TGG | 0.588730 | 8_1:-11551578 | None:intergenic |
| CGTGGAAGATCTAATGGAGG+AGG | 0.590449 | 8_1:+11551534 | Msa1178650:CDS |
| CTTCATATTCAGAACATAGC+CGG | 0.591166 | 8_1:-11557191 | None:intergenic |
| ACAATATGTATTCTAATCGA+GGG | 0.599907 | 8_1:+11551487 | None:intergenic |
| TTTGATCTATTCTGATAACC+CGG | 0.602813 | 8_1:-11551645 | None:intergenic |
| TAGTTAAATGTGTGTTGATG+AGG | 0.604515 | 8_1:+11557003 | Msa1178650:CDS |
| GTGAATCTGGCACCTACTGT+TGG | 0.604853 | 8_1:+11551693 | Msa1178650:CDS |
| TGTTCTTCAATACCAACAGT+AGG | 0.610446 | 8_1:-11551705 | None:intergenic |
| TTCGTGCCATTGGAATTTGG+GGG | 0.614449 | 8_1:+11557124 | Msa1178650:CDS |
| CGGCTATGTTCTGAATATGA+AGG | 0.635732 | 8_1:+11557192 | Msa1178650:CDS |
| TATTCTAATCGAGGGAGAGG+AGG | 0.640118 | 8_1:+11551495 | Msa1178650:CDS |
| AGTAACAAGTATCGATCGTG+TGG | 0.657119 | 8_1:-11551605 | None:intergenic |
| AGAGGAGGATACAATAATCG+TGG | 0.686280 | 8_1:+11551510 | Msa1178650:CDS |
| GGTCGTGGAAGATCTAATGG+AGG | 0.718084 | 8_1:+11551531 | Msa1178650:CDS |
| GATCTATTCTGATAACCCGG+AGG | 0.729143 | 8_1:-11551642 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTTATTACCATAA+AGG | - | chr8_1:11555588-11555607 | None:intergenic | 10.0% |
| !! | ATAAATTCATTAAAAAATGA+TGG | - | chr8_1:11555879-11555898 | None:intergenic | 10.0% |
| !!! | ATTTGAATATTAATTTTTGT+CGG | + | chr8_1:11556709-11556728 | Msa1178650:intron | 10.0% |
| !! | ATCATATATTAATTGAAATA+GGG | - | chr8_1:11556821-11556840 | None:intergenic | 10.0% |
| !!! | AAAATTTAAAGATTTTTCAA+AGG | + | chr8_1:11556879-11556898 | Msa1178650:intron | 10.0% |
| !!! | ATGACATATTTTTTTTTTAT+AGG | - | chr8_1:11556927-11556946 | None:intergenic | 10.0% |
| !!! | GCTTTATTAAAATGAATAAA+AGG | - | chr8_1:11552425-11552444 | None:intergenic | 15.0% |
| !! | ATTAGAGAAAAAATTCAAAA+TGG | + | chr8_1:11555023-11555042 | Msa1178650:intron | 15.0% |
| !! | GTTAAATATTAAGTGATAAA+TGG | - | chr8_1:11555191-11555210 | None:intergenic | 15.0% |
| !!! | TTTTTTTAATTAAGACTACA+AGG | + | chr8_1:11556154-11556173 | Msa1178650:intron | 15.0% |
| !!! | TTTTTTAATTAAGACTACAA+GGG | + | chr8_1:11556155-11556174 | Msa1178650:intron | 15.0% |
| !! | CATCATATATTAATTGAAAT+AGG | - | chr8_1:11556822-11556841 | None:intergenic | 15.0% |
| !! | CTATTTCAATTAATATATGA+TGG | + | chr8_1:11556820-11556839 | Msa1178650:intron | 15.0% |
| !! | TATCAGAATAGATCAAATAA+AGG | + | chr8_1:11551651-11551670 | Msa1178650:CDS | 20.0% |
| !!! | GAATTGACATTTAAAACAAA+AGG | - | chr8_1:11551897-11551916 | None:intergenic | 20.0% |
| !! | GTTATTCTTATGAAATCTAA+AGG | + | chr8_1:11552632-11552651 | Msa1178650:intron | 20.0% |
| !! | TGAAGAAGAAAATTAACTTA+CGG | - | chr8_1:11555488-11555507 | None:intergenic | 20.0% |
| !! | AAAATTTATTACCATAAAGG+AGG | - | chr8_1:11555585-11555604 | None:intergenic | 20.0% |
| !! | AATACATCATATTAGTAGTA+CGG | - | chr8_1:11555617-11555636 | None:intergenic | 20.0% |
| !!! | TGTATGTTTAGTTTCATTTT+TGG | + | chr8_1:11555670-11555689 | Msa1178650:intron | 20.0% |
| !!! | ATAGATTTTGGTTAAAAATG+AGG | - | chr8_1:11555927-11555946 | None:intergenic | 20.0% |
| !!! | TGCTTTTATGAAATAGATTT+TGG | - | chr8_1:11555939-11555958 | None:intergenic | 20.0% |
| !!! | TATTTCATAAAAGCACTTTT+TGG | + | chr8_1:11555944-11555963 | Msa1178650:intron | 20.0% |
| !!! | GTGATTGAATTTATAGTTTT+TGG | + | chr8_1:11556064-11556083 | Msa1178650:intron | 20.0% |
| !! | GACATTTAAAACAAAAGGAT+TGG | - | chr8_1:11551892-11551911 | None:intergenic | 25.0% |
| ! | TCCATTATTTGTGATATGAT+CGG | - | chr8_1:11551973-11551992 | None:intergenic | 25.0% |
| !!! | TTGCTAATTTTGGTTAATTG+AGG | - | chr8_1:11552158-11552177 | None:intergenic | 25.0% |
| !!! | AATGGAGTCTATTTCTAATT+CGG | + | chr8_1:11552274-11552293 | Msa1178650:intron | 25.0% |
| ! | GATATTATTTGTGCTACAAT+TGG | - | chr8_1:11552327-11552346 | None:intergenic | 25.0% |
| !! | AAAATAGAAGTATGAGAGTA+GGG | - | chr8_1:11552560-11552579 | None:intergenic | 25.0% |
| !! | TAAAATAGAAGTATGAGAGT+AGG | - | chr8_1:11552561-11552580 | None:intergenic | 25.0% |
| !! | TACTCTCATACTTCTATTTT+AGG | + | chr8_1:11552560-11552579 | Msa1178650:intron | 25.0% |
| !! | ACTCTCATACTTCTATTTTA+GGG | + | chr8_1:11552561-11552580 | Msa1178650:intron | 25.0% |
| ! | TTCAACAAAGGAGATAAAAT+TGG | - | chr8_1:11552678-11552697 | None:intergenic | 25.0% |
| ! | ATCAAATTGAGTTTCAACAA+AGG | - | chr8_1:11552690-11552709 | None:intergenic | 25.0% |
| ! | ATAAAAGAAAATCATGCATG+AGG | - | chr8_1:11552754-11552773 | None:intergenic | 25.0% |
| !! | CATGATTTTCTTTTATCCAA+AGG | + | chr8_1:11552758-11552777 | Msa1178650:intron | 25.0% |
| !! | CTAATCTTCCTAAAACTTTT+TGG | + | chr8_1:11552885-11552904 | Msa1178650:intron | 25.0% |
| !! | GCAAAATTCCAAAAAGTTTT+AGG | - | chr8_1:11552896-11552915 | None:intergenic | 25.0% |
| !! | ATAAACAGCCAAAAATTTTG+AGG | - | chr8_1:11553021-11553040 | None:intergenic | 25.0% |
| ! | CAGAATTATCATTGAATGAA+GGG | - | chr8_1:11553252-11553271 | None:intergenic | 25.0% |
| ! | TATGACAAAACAGAAGATAA+AGG | - | chr8_1:11553556-11553575 | None:intergenic | 25.0% |
| !! | AATTTGGAATTTCAAAACCA+GGG | - | chr8_1:11554020-11554039 | None:intergenic | 25.0% |
| ! | CGTTTCAAAATAAAAGATCT+TGG | + | chr8_1:11554291-11554310 | Msa1178650:intron | 25.0% |
| !! | AGCATATTTCCTTTGATTTA+AGG | - | chr8_1:11554370-11554389 | None:intergenic | 25.0% |
| ! | AATTAACTTACGGAAAATGT+GGG | - | chr8_1:11555478-11555497 | None:intergenic | 25.0% |
| ! | AAATTAACTTACGGAAAATG+TGG | - | chr8_1:11555479-11555498 | None:intergenic | 25.0% |
| !! | TTCTTTTTGACAGAATAACA+AGG | - | chr8_1:11555518-11555537 | None:intergenic | 25.0% |
| !!! | AGCACTTTTTGGTAAAAATA+TGG | + | chr8_1:11555955-11555974 | Msa1178650:intron | 25.0% |
| ! | AACAAACTTATAACTGATAG+CGG | + | chr8_1:11556032-11556051 | Msa1178650:intron | 25.0% |
| !! | AGTTGTTGAACTAGTTTATA+AGG | + | chr8_1:11556094-11556113 | Msa1178650:intron | 25.0% |
| ! | TATAAGCTCATTTGACTAAA+AGG | - | chr8_1:11556366-11556385 | None:intergenic | 25.0% |
| !!! | AATAGTTGTTTTACCTATTC+CGG | - | chr8_1:11557154-11557173 | None:intergenic | 25.0% |
| TTTGATCTATTCTGATAACC+CGG | - | chr8_1:11551648-11551667 | None:intergenic | 30.0% | |
| GGATCAATACAAAAGTCTAT+TGG | + | chr8_1:11551782-11551801 | Msa1178650:intron | 30.0% | |
| ! | GTCAATTCCAATTCTGATTT+TGG | + | chr8_1:11551909-11551928 | Msa1178650:intron | 30.0% |
| ATGCTTACCAAAATCAGAAT+TGG | - | chr8_1:11551919-11551938 | None:intergenic | 30.0% | |
| ACCGATCATATCACAAATAA+TGG | + | chr8_1:11551969-11551988 | Msa1178650:intron | 30.0% | |
| TAAGATGCAAATCATCAGAA+AGG | - | chr8_1:11552088-11552107 | None:intergenic | 30.0% | |
| CATGAAAAGTTGGAACATAA+AGG | - | chr8_1:11552118-11552137 | None:intergenic | 30.0% | |
| ATCAAATTGGCATGAAAAGT+TGG | - | chr8_1:11552128-11552147 | None:intergenic | 30.0% | |
| TTGAGGAACAGAAATCAAAT+TGG | - | chr8_1:11552141-11552160 | None:intergenic | 30.0% | |
| !! | AGCTGAACATTTGCTAATTT+TGG | - | chr8_1:11552168-11552187 | None:intergenic | 30.0% |
| AAAACTACCAAGAAGATGAT+TGG | + | chr8_1:11552221-11552240 | Msa1178650:intron | 30.0% | |
| TATACATTGATGCCTATCAA+AGG | - | chr8_1:11552390-11552409 | None:intergenic | 30.0% | |
| GAAAAATGACAAACATCACA+AGG | - | chr8_1:11552455-11552474 | None:intergenic | 30.0% | |
| TTAGTGATACTACTGAAATG+CGG | - | chr8_1:11552494-11552513 | None:intergenic | 30.0% | |
| AAGGATATCAAAGATATGAG+TGG | - | chr8_1:11552519-11552538 | None:intergenic | 30.0% | |
| ATATCCTTCATGCTGATATT+TGG | + | chr8_1:11552531-11552550 | Msa1178650:intron | 30.0% | |
| TATCCTTCATGCTGATATTT+GGG | + | chr8_1:11552532-11552551 | Msa1178650:intron | 30.0% | |
| AATCTCATAAGGAGATTTGT+TGG | - | chr8_1:11552969-11552988 | None:intergenic | 30.0% | |
| TTATGGTGAAGAATCTCATA+AGG | - | chr8_1:11552980-11552999 | None:intergenic | 30.0% | |
| ! | TTCCTACACCTCAAAATTTT+TGG | + | chr8_1:11553010-11553029 | Msa1178650:intron | 30.0% |
| CATTTGAAGATTGGTGAAAA+GGG | - | chr8_1:11553207-11553226 | None:intergenic | 30.0% | |
| ATTGAATGAAGGGTTAAATG+AGG | - | chr8_1:11553242-11553261 | None:intergenic | 30.0% | |
| GCAGAATTATCATTGAATGA+AGG | - | chr8_1:11553253-11553272 | None:intergenic | 30.0% | |
| AGATAAATTTGATGGAGGAA+TGG | - | chr8_1:11553320-11553339 | None:intergenic | 30.0% | |
| CTAGGTGAAGATAAATTTGA+TGG | - | chr8_1:11553328-11553347 | None:intergenic | 30.0% | |
| TCAAATTTATCTTCACCTAG+CGG | + | chr8_1:11553328-11553347 | Msa1178650:intron | 30.0% | |
| ACTGGGTCTATTTATAATTC+TGG | - | chr8_1:11553458-11553477 | None:intergenic | 30.0% | |
| ATTAATACCTGAAGATGGAT+TGG | - | chr8_1:11553518-11553537 | None:intergenic | 30.0% | |
| !!! | GAATAATTGTTTTGGGTTCA+GGG | - | chr8_1:11553630-11553649 | None:intergenic | 30.0% |
| !!! | TGAATAATTGTTTTGGGTTC+AGG | - | chr8_1:11553631-11553650 | None:intergenic | 30.0% |
| ! | GAGGCTTGAATAATTGTTTT+GGG | - | chr8_1:11553637-11553656 | None:intergenic | 30.0% |
| ! | TGAGGCTTGAATAATTGTTT+TGG | - | chr8_1:11553638-11553657 | None:intergenic | 30.0% |
| CTCTTTCTTTAAACAAAACC+TGG | + | chr8_1:11553701-11553720 | Msa1178650:intron | 30.0% | |
| !! | TTGTTCTAAAAACCATCCTT+TGG | - | chr8_1:11553935-11553954 | None:intergenic | 30.0% |
| !!! | AGGATGGTTTTTAGAACAAT+TGG | + | chr8_1:11553936-11553955 | Msa1178650:intron | 30.0% |
| ! | ATCAACAATGCATTTTTGCA+CGG | + | chr8_1:11553961-11553980 | Msa1178650:intron | 30.0% |
| ! | ATTTGGAATTTCAAAACCAG+GGG | - | chr8_1:11554019-11554038 | None:intergenic | 30.0% |
| ! | GAATTTGGAATTTCAAAACC+AGG | - | chr8_1:11554021-11554040 | None:intergenic | 30.0% |
| TTAGAGGAACAATCAGAATT+TGG | - | chr8_1:11554036-11554055 | None:intergenic | 30.0% | |
| ATCATCCACATATACTAACA+AGG | - | chr8_1:11554211-11554230 | None:intergenic | 30.0% | |
| ! | CAATTATGTCAAGCAGATTT+TGG | + | chr8_1:11554263-11554282 | Msa1178650:intron | 30.0% |
| TTAGAGTTGCTTAATGATAG+TGG | + | chr8_1:11554390-11554409 | Msa1178650:intron | 30.0% | |
| TAAGCTGTATGATCAGAATA+AGG | - | chr8_1:11554486-11554505 | None:intergenic | 30.0% | |
| GATACTAGAAAGTCTATTAC+TGG | + | chr8_1:11554735-11554754 | Msa1178650:intron | 30.0% | |
| ACTGGTTATTGTGTATTTCT+TGG | + | chr8_1:11554753-11554772 | Msa1178650:intron | 30.0% | |
| GTTTATCTTGTGAGATTCAA+TGG | + | chr8_1:11554859-11554878 | Msa1178650:intron | 30.0% | |
| TTGTCACAATAAACTGAAGA+TGG | - | chr8_1:11554927-11554946 | None:intergenic | 30.0% | |
| TCAAAACTTCATTTCCAAGT+TGG | + | chr8_1:11555124-11555143 | Msa1178650:intron | 30.0% | |
| CAAAACTTCATTTCCAAGTT+GGG | + | chr8_1:11555125-11555144 | Msa1178650:intron | 30.0% | |
| ! | GTACACTAGCTTATATACAA+TGG | - | chr8_1:11555321-11555340 | None:intergenic | 30.0% |
| ATTAACTTACGGAAAATGTG+GGG | - | chr8_1:11555477-11555496 | None:intergenic | 30.0% | |
| !!! | AGTGTATGATTTGTTTTGAC+AGG | + | chr8_1:11555715-11555734 | Msa1178650:intron | 30.0% |
| TTTGGTAAAAATATGGTGAG+TGG | + | chr8_1:11555962-11555981 | Msa1178650:intron | 30.0% | |
| TAAAAATATGGTGAGTGGTT+GGG | + | chr8_1:11555967-11555986 | Msa1178650:intron | 30.0% | |
| AACAGCTCATAAGAAAATGA+TGG | + | chr8_1:11556327-11556346 | Msa1178650:intron | 30.0% | |
| TTTGACTAAAAGGACCTATT+TGG | - | chr8_1:11556356-11556375 | None:intergenic | 30.0% | |
| TAGTTAATGACTCATAGTTG+AGG | - | chr8_1:11556563-11556582 | None:intergenic | 30.0% | |
| CTTCCAATGAATGTTAAACT+AGG | + | chr8_1:11556583-11556602 | Msa1178650:intron | 30.0% | |
| TCACCTAGTTTAACATTCAT+TGG | - | chr8_1:11556589-11556608 | None:intergenic | 30.0% | |
| !! | TAATTGAAATAGGGCTAGTT+TGG | - | chr8_1:11556812-11556831 | None:intergenic | 30.0% |
| TCATTTCGCTGTAACATTAT+TGG | - | chr8_1:11556858-11556877 | None:intergenic | 30.0% | |
| ! | TAGTTAAATGTGTGTTGATG+AGG | + | chr8_1:11557003-11557022 | Msa1178650:CDS | 30.0% |
| GGCAAAAAAAAATTCACATG+TGG | + | chr8_1:11557071-11557090 | Msa1178650:CDS | 30.0% | |
| ! | GATACTTGTTACTTGCTACA+TGG | + | chr8_1:11551615-11551634 | Msa1178650:CDS | 35.0% |
| TGTTCTTCAATACCAACAGT+AGG | - | chr8_1:11551708-11551727 | None:intergenic | 35.0% | |
| ! | TTTGTATTGATCCTGTGTGA+AGG | - | chr8_1:11551775-11551794 | None:intergenic | 35.0% |
| TGAATTGGTTAGAGTTGTGT+TGG | - | chr8_1:11551856-11551875 | None:intergenic | 35.0% | |
| GGTTGAGCTAGTATTTGAAT+TGG | - | chr8_1:11551871-11551890 | None:intergenic | 35.0% | |
| TTGGTAAGCATTCTAACTTC+TGG | + | chr8_1:11551928-11551947 | Msa1178650:intron | 35.0% | |
| AACTTCTGGATCATTGATAC+AGG | + | chr8_1:11551942-11551961 | Msa1178650:intron | 35.0% | |
| !! | GCAGTAGTAAAGGTGTTATT+TGG | - | chr8_1:11552044-11552063 | None:intergenic | 35.0% |
| AAGCAGAATGTGAAATAGCA+TGG | - | chr8_1:11552304-11552323 | None:intergenic | 35.0% | |
| ATATCTCTGATTCTGCCTTA+TGG | + | chr8_1:11552342-11552361 | Msa1178650:intron | 35.0% | |
| TAGGCCATATTTCCTTTGAT+AGG | + | chr8_1:11552375-11552394 | Msa1178650:intron | 35.0% | |
| GATGCCTATCAAAGGAAATA+TGG | - | chr8_1:11552382-11552401 | None:intergenic | 35.0% | |
| ATCCTTCATGCTGATATTTG+GGG | + | chr8_1:11552533-11552552 | Msa1178650:intron | 35.0% | |
| TCGACTAAAGTCATCAACAA+GGG | - | chr8_1:11552603-11552622 | None:intergenic | 35.0% | |
| ATCGACTAAAGTCATCAACA+AGG | - | chr8_1:11552604-11552623 | None:intergenic | 35.0% | |
| ! | ATGACTTTAGTCGATTCACT+TGG | + | chr8_1:11552609-11552628 | Msa1178650:intron | 35.0% |
| ! | TGACTTTAGTCGATTCACTT+GGG | + | chr8_1:11552610-11552629 | Msa1178650:intron | 35.0% |
| GCTTCTTAAGCACTTTAGTT+TGG | - | chr8_1:11552714-11552733 | None:intergenic | 35.0% | |
| ! | TCAACAATACCATTTTGCTG+CGG | - | chr8_1:11552815-11552834 | None:intergenic | 35.0% |
| !! | AGGAGATTTGTTGGAAAGAA+GGG | - | chr8_1:11552960-11552979 | None:intergenic | 35.0% |
| !! | AAGGAGATTTGTTGGAAAGA+AGG | - | chr8_1:11552961-11552980 | None:intergenic | 35.0% |
| !!! | AATTTTGAGGTGTAGGAAGA+CGG | - | chr8_1:11553008-11553027 | None:intergenic | 35.0% |
| !!! | AGCCAAAAATTTTGAGGTGT+AGG | - | chr8_1:11553015-11553034 | None:intergenic | 35.0% |
| ! | CTCATCAACTTTTCATCTCT+AGG | + | chr8_1:11553155-11553174 | Msa1178650:intron | 35.0% |
| GCATTTGAAGATTGGTGAAA+AGG | - | chr8_1:11553208-11553227 | None:intergenic | 35.0% | |
| GAGTAGTAGCATTTGAAGAT+TGG | - | chr8_1:11553216-11553235 | None:intergenic | 35.0% | |
| AATGAAGGGTTAAATGAGGT+AGG | - | chr8_1:11553238-11553257 | None:intergenic | 35.0% | |
| !! | CAAGTTGTTTTCATCAGCAT+AGG | - | chr8_1:11553290-11553309 | None:intergenic | 35.0% |
| CTATGCTGATGAAAACAACT+TGG | + | chr8_1:11553288-11553307 | Msa1178650:intron | 35.0% | |
| GGTGAAGATAAATTTGATGG+AGG | - | chr8_1:11553325-11553344 | None:intergenic | 35.0% | |
| AATTCTGGTAGAATGCCTAA+CGG | - | chr8_1:11553443-11553462 | None:intergenic | 35.0% | |
| GCAGTATTAATACCTGAAGA+TGG | - | chr8_1:11553523-11553542 | None:intergenic | 35.0% | |
| AAGCCTCAAAACATGAATGT+TGG | + | chr8_1:11553650-11553669 | Msa1178650:intron | 35.0% | |
| AGGATTAAATACCATGCTGA+TGG | + | chr8_1:11553778-11553797 | Msa1178650:intron | 35.0% | |
| !!! | CTTTGAAATTTTTAGCCCTG+TGG | + | chr8_1:11553867-11553886 | Msa1178650:intron | 35.0% |
| ! | TTTGGAATTTCAAAACCAGG+GGG | - | chr8_1:11554018-11554037 | None:intergenic | 35.0% |
| AGATTGCACAAATCTCTCTA+TGG | + | chr8_1:11554063-11554082 | Msa1178650:intron | 35.0% | |
| TCAACGTTGTAGTAAGCTTA+TGG | - | chr8_1:11554116-11554135 | None:intergenic | 35.0% | |
| !! | ACTACAACGTTGATTTCTCT+CGG | + | chr8_1:11554123-11554142 | Msa1178650:intron | 35.0% |
| !!! | GGTCCTTTAAGATTTTTCCT+TGG | + | chr8_1:11554312-11554331 | Msa1178650:intron | 35.0% |
| AGGCCAAGGAAAAATCTTAA+AGG | - | chr8_1:11554318-11554337 | None:intergenic | 35.0% | |
| CTGGCATTTCCTTAAATCAA+AGG | + | chr8_1:11554358-11554377 | Msa1178650:intron | 35.0% | |
| CTGATCATACAGCTTATAGA+AGG | + | chr8_1:11554490-11554509 | Msa1178650:intron | 35.0% | |
| TGTACTGAGAATGTTATGTC+TGG | - | chr8_1:11554552-11554571 | None:intergenic | 35.0% | |
| AGATAATTGTAGCGATGTAG+AGG | - | chr8_1:11554682-11554701 | None:intergenic | 35.0% | |
| TCTACATCGCTACAATTATC+TGG | + | chr8_1:11554681-11554700 | Msa1178650:intron | 35.0% | |
| !! | TGGATTTGCTGATTCTGATT+GGG | + | chr8_1:11554701-11554720 | Msa1178650:intron | 35.0% |
| ! | TTCATCTGAAGCAGAATACA+GGG | + | chr8_1:11554827-11554846 | Msa1178650:intron | 35.0% |
| GAGATTTGATAGGAATGTGT+AGG | - | chr8_1:11554905-11554924 | None:intergenic | 35.0% | |
| ACTGAAGATGGAGATTTGAT+AGG | - | chr8_1:11554915-11554934 | None:intergenic | 35.0% | |
| TTTGTACGCTCATGAAATGT+AGG | - | chr8_1:11554978-11554997 | None:intergenic | 35.0% | |
| !!! | AATGAAGTTTTGAAACGAGG+TGG | - | chr8_1:11555117-11555136 | None:intergenic | 35.0% |
| !!! | GGAAATGAAGTTTTGAAACG+AGG | - | chr8_1:11555120-11555139 | None:intergenic | 35.0% |
| CTAAGTAGCCAAAACAGTTA+CGG | - | chr8_1:11555290-11555309 | None:intergenic | 35.0% | |
| AAGGAATCCGGTAATATCTT+GGG | + | chr8_1:11555443-11555462 | Msa1178650:intron | 35.0% | |
| GTGAAATCCCAAGATATTAC+CGG | - | chr8_1:11555453-11555472 | None:intergenic | 35.0% | |
| GTAAAAATATGGTGAGTGGT+TGG | + | chr8_1:11555966-11555985 | Msa1178650:intron | 35.0% | |
| ! | GTTGGGAAACTAGTTTATAG+TGG | + | chr8_1:11555984-11556003 | Msa1178650:intron | 35.0% |
| !! | TAACTGATAGCGGATAAGTT+AGG | + | chr8_1:11556042-11556061 | Msa1178650:intron | 35.0% |
| GAAAATGATGGTTGCCAAAT+AGG | + | chr8_1:11556339-11556358 | Msa1178650:intron | 35.0% | |
| ACACTTTGTGTATGTTTGTG+GGG | - | chr8_1:11556437-11556456 | None:intergenic | 35.0% | |
| GACACTTTGTGTATGTTTGT+GGG | - | chr8_1:11556438-11556457 | None:intergenic | 35.0% | |
| TGACACTTTGTGTATGTTTG+TGG | - | chr8_1:11556439-11556458 | None:intergenic | 35.0% | |
| ! | CAAACATACACAAAGTGTCA+TGG | + | chr8_1:11556439-11556458 | Msa1178650:intron | 35.0% |
| TCGACTAAAATCATACACCA+TGG | - | chr8_1:11556465-11556484 | None:intergenic | 35.0% | |
| GAATGTTAAACTAGGTGAAG+TGG | + | chr8_1:11556591-11556610 | Msa1178650:intron | 35.0% | |
| !! | GGGATCAAAGTGGATTAATA+AGG | + | chr8_1:11556762-11556781 | Msa1178650:intron | 35.0% |
| ! | TAAATGTGTGTTGATGAGGT+TGG | + | chr8_1:11557007-11557026 | Msa1178650:CDS | 35.0% |
| !! | TCAAAAGGACTTGTTGGAAT+TGG | + | chr8_1:11557050-11557069 | Msa1178650:CDS | 35.0% |
| TTGCAGAACAAATGTATGAC+CGG | + | chr8_1:11557172-11557191 | Msa1178650:CDS | 35.0% | |
| CTTCATATTCAGAACATAGC+CGG | - | chr8_1:11557194-11557213 | None:intergenic | 35.0% | |
| ATGTATTCTAATCGAGGGAG+AGG | + | chr8_1:11551492-11551511 | Msa1178650:CDS | 40.0% | |
| AGAGGAGGATACAATAATCG+TGG | + | chr8_1:11551510-11551529 | Msa1178650:CDS | 40.0% | |
| !! | TGCATTGGCGATTCTGATTT+TGG | - | chr8_1:11551566-11551585 | None:intergenic | 40.0% |
| TTCTGTGACAATGAGTGCAT+TGG | - | chr8_1:11551581-11551600 | None:intergenic | 40.0% | |
| !! | AGTAACAAGTATCGATCGTG+TGG | - | chr8_1:11551608-11551627 | None:intergenic | 40.0% |
| ! | TCAAATAAAGGCGCACAATC+AGG | + | chr8_1:11551663-11551682 | Msa1178650:CDS | 40.0% |
| ! | CAAATAAAGGCGCACAATCA+GGG | + | chr8_1:11551664-11551683 | Msa1178650:CDS | 40.0% |
| AAACCAGAATTCGATGTTGC+AGG | - | chr8_1:11551750-11551769 | None:intergenic | 40.0% | |
| !!! | TTCTGGTTTTTCCTTCACAC+AGG | + | chr8_1:11551761-11551780 | Msa1178650:intron | 40.0% |
| GGAGTGACTATTGGTAAGTA+TGG | - | chr8_1:11551997-11552016 | None:intergenic | 40.0% | |
| GTTATTTGGCAAGTGTATGG+TGG | - | chr8_1:11552030-11552049 | None:intergenic | 40.0% | |
| !! | GGTGTTATTTGGCAAGTGTA+TGG | - | chr8_1:11552033-11552052 | None:intergenic | 40.0% |
| AGCTGTACCAATCATCTTCT+TGG | - | chr8_1:11552231-11552250 | None:intergenic | 40.0% | |
| GATGATTGGTACAGCTAGAT+TGG | + | chr8_1:11552235-11552254 | Msa1178650:intron | 40.0% | |
| ATTGGTACAGCTAGATTGGT+TGG | + | chr8_1:11552239-11552258 | Msa1178650:intron | 40.0% | |
| GCCTTATGGCATATGAGATT+AGG | + | chr8_1:11552356-11552375 | Msa1178650:intron | 40.0% | |
| GCCTAATCTCATATGCCATA+AGG | - | chr8_1:11552360-11552379 | None:intergenic | 40.0% | |
| AAGTGCTTAAGAAGCGACAA+TGG | + | chr8_1:11552719-11552738 | Msa1178650:intron | 40.0% | |
| CCTTTGGTGAAGAATTCCTT+TGG | - | chr8_1:11552777-11552796 | None:intergenic | 40.0% | |
| CCAAAGGAATTCTTCACCAA+AGG | + | chr8_1:11552774-11552793 | Msa1178650:intron | 40.0% | |
| ! | AACAATACCATTTTGCTGCG+GGG | - | chr8_1:11552813-11552832 | None:intergenic | 40.0% |
| ! | CAACAATACCATTTTGCTGC+GGG | - | chr8_1:11552814-11552833 | None:intergenic | 40.0% |
| !! | GGAGATTTGTTGGAAAGAAG+GGG | - | chr8_1:11552959-11552978 | None:intergenic | 40.0% |
| !!! | ATTTTGAGGTGTAGGAAGAC+GGG | - | chr8_1:11553007-11553026 | None:intergenic | 40.0% |
| CATCCACTTTACACACACAT+AGG | + | chr8_1:11553047-11553066 | Msa1178650:intron | 40.0% | |
| ! | AGCCTTCATTGGCTATAAAG+AGG | + | chr8_1:11553099-11553118 | Msa1178650:intron | 40.0% |
| ! | GCCTTCATTGGCTATAAAGA+GGG | + | chr8_1:11553100-11553119 | Msa1178650:intron | 40.0% |
| ACCCTCTTTATAGCCAATGA+AGG | - | chr8_1:11553104-11553123 | None:intergenic | 40.0% | |
| !! | GGCTATAAAGAGGGTATCAA+AGG | + | chr8_1:11553109-11553128 | Msa1178650:intron | 40.0% |
| !! | ACAATAGAGGTATTGCGAGT+GGG | - | chr8_1:11553358-11553377 | None:intergenic | 40.0% |
| !! | TACAATAGAGGTATTGCGAG+TGG | - | chr8_1:11553359-11553378 | None:intergenic | 40.0% |
| AAAGAAGAAGAAGTGGAAGG+AGG | - | chr8_1:11553406-11553425 | None:intergenic | 40.0% | |
| GGTAAAGAAGAAGAAGTGGA+AGG | - | chr8_1:11553409-11553428 | None:intergenic | 40.0% | |
| GAGAGGTAAAGAAGAAGAAG+TGG | - | chr8_1:11553413-11553432 | None:intergenic | 40.0% | |
| ATTCTGGTAGAATGCCTAAC+GGG | - | chr8_1:11553442-11553461 | None:intergenic | 40.0% | |
| AAATAGACCCAGTTACTTGC+AGG | + | chr8_1:11553465-11553484 | Msa1178650:intron | 40.0% | |
| TGATAGTCCTGCAAGTAACT+GGG | - | chr8_1:11553475-11553494 | None:intergenic | 40.0% | |
| ! | CTGCCAACATTCATGTTTTG+AGG | - | chr8_1:11553656-11553675 | None:intergenic | 40.0% |
| AGGAAGATCAACAATAGTCC+AGG | - | chr8_1:11553722-11553741 | None:intergenic | 40.0% | |
| ACTATTGTTGATCTTCCTGC+AGG | + | chr8_1:11553724-11553743 | Msa1178650:intron | 40.0% | |
| ATACCCAACGACATCCAATA+GGG | - | chr8_1:11553756-11553775 | None:intergenic | 40.0% | |
| TATACCCAACGACATCCAAT+AGG | - | chr8_1:11553757-11553776 | None:intergenic | 40.0% | |
| TTGGATGTCGTTGGGTATAT+AGG | + | chr8_1:11553758-11553777 | Msa1178650:intron | 40.0% | |
| TGCTAAAGGCTTCACTCAAA+TGG | + | chr8_1:11553831-11553850 | Msa1178650:intron | 40.0% | |
| TAAAGGCTTCACTCAAATGG+AGG | + | chr8_1:11553834-11553853 | Msa1178650:intron | 40.0% | |
| AAAGGCTTCACTCAAATGGA+GGG | + | chr8_1:11553835-11553854 | Msa1178650:intron | 40.0% | |
| AACTCTGACAGTGGTTAACT+TGG | - | chr8_1:11553893-11553912 | None:intergenic | 40.0% | |
| TTTGCACGGAGACTTAAATG+AGG | + | chr8_1:11553975-11553994 | Msa1178650:intron | 40.0% | |
| TAAAGCAAGCTAGTCGTCAA+TGG | + | chr8_1:11554088-11554107 | Msa1178650:intron | 40.0% | |
| !! | CACAGCCTTGTTAGTATATG+TGG | + | chr8_1:11554203-11554222 | Msa1178650:intron | 40.0% |
| GTGGATGATATTGTCTTGAC+TGG | + | chr8_1:11554222-11554241 | Msa1178650:intron | 40.0% | |
| ATTTAAGGAAATGCCAGCCT+TGG | - | chr8_1:11554355-11554374 | None:intergenic | 40.0% | |
| ACAGCTTATAGAAGGCTCAT+TGG | + | chr8_1:11554498-11554517 | Msa1178650:intron | 40.0% | |
| CTTATAGAAGGCTCATTGGT+AGG | + | chr8_1:11554502-11554521 | Msa1178650:intron | 40.0% | |
| TGAGAATGTTATGTCTGGTC+GGG | - | chr8_1:11554547-11554566 | None:intergenic | 40.0% | |
| CTGAGAATGTTATGTCTGGT+CGG | - | chr8_1:11554548-11554567 | None:intergenic | 40.0% | |
| GAAATGAGATTCAAGAGGCT+GGG | - | chr8_1:11554595-11554614 | None:intergenic | 40.0% | |
| GCATGGAAATGAGATTCAAG+AGG | - | chr8_1:11554600-11554619 | None:intergenic | 40.0% | |
| !! | CTGGATTTGCTGATTCTGAT+TGG | + | chr8_1:11554700-11554719 | Msa1178650:intron | 40.0% |
| ! | CTTTCTAGTATCCAAACAGC+AGG | - | chr8_1:11554727-11554746 | None:intergenic | 40.0% |
| ! | CTTCATCTGAAGCAGAATAC+AGG | + | chr8_1:11554826-11554845 | Msa1178650:intron | 40.0% |
| !! | ATGATGATGGAACTGGTAAG+AGG | - | chr8_1:11555058-11555077 | None:intergenic | 40.0% |
| !! | AGTTGAGATGATGATGGAAC+TGG | - | chr8_1:11555065-11555084 | None:intergenic | 40.0% |
| ! | TCAGCAAGTTGAGATGATGA+TGG | - | chr8_1:11555071-11555090 | None:intergenic | 40.0% |
| ! | AGCTAGTACCGTAACTGTTT+TGG | + | chr8_1:11555279-11555298 | Msa1178650:intron | 40.0% |
| !! | AGATCTGCTTTGAAGGAATC+CGG | + | chr8_1:11555431-11555450 | Msa1178650:intron | 40.0% |
| GAAGGAATCCGGTAATATCT+TGG | + | chr8_1:11555442-11555461 | Msa1178650:intron | 40.0% | |
| ATTACCATAAAGGAGGAGTG+TGG | - | chr8_1:11555578-11555597 | None:intergenic | 40.0% | |
| ! | TTTGATCCCTCATGTTTCTG+TGG | - | chr8_1:11556751-11556770 | None:intergenic | 40.0% |
| AGAAACATGAGGGATCAAAG+TGG | + | chr8_1:11556752-11556771 | Msa1178650:intron | 40.0% | |
| GTGCAACAAGCTAACTCAAA+AGG | + | chr8_1:11557035-11557054 | Msa1178650:CDS | 40.0% | |
| GCTAACTCAAAAGGACTTGT+TGG | + | chr8_1:11557044-11557063 | Msa1178650:CDS | 40.0% | |
| GTGGAATCATTGTTACAGAC+AGG | + | chr8_1:11557090-11557109 | Msa1178650:intron | 40.0% | |
| ! | ATGTTCGTGCCATTGGAATT+TGG | + | chr8_1:11557121-11557140 | Msa1178650:CDS | 40.0% |
| ! | TGTTCGTGCCATTGGAATTT+GGG | + | chr8_1:11557122-11557141 | Msa1178650:CDS | 40.0% |
| ! | CGGCTATGTTCTGAATATGA+AGG | + | chr8_1:11557192-11557211 | Msa1178650:CDS | 40.0% |
| TATTCTAATCGAGGGAGAGG+AGG | + | chr8_1:11551495-11551514 | Msa1178650:CDS | 45.0% | |
| GGATACAATAATCGTGGTCG+TGG | + | chr8_1:11551516-11551535 | Msa1178650:CDS | 45.0% | |
| GATCTATTCTGATAACCCGG+AGG | - | chr8_1:11551645-11551664 | None:intergenic | 45.0% | |
| ACACCTGCAACATCGAATTC+TGG | + | chr8_1:11551744-11551763 | Msa1178650:intron | 45.0% | |
| GGGCTTAATGGAGTGACTAT+TGG | - | chr8_1:11552006-11552025 | None:intergenic | 45.0% | |
| TTTGGCAAGTGTATGGTGGT+GGG | - | chr8_1:11552026-11552045 | None:intergenic | 45.0% | |
| ATTTGGCAAGTGTATGGTGG+TGG | - | chr8_1:11552027-11552046 | None:intergenic | 45.0% | |
| CACCTTTACTACTGCACTCA+TGG | + | chr8_1:11552049-11552068 | Msa1178650:intron | 45.0% | |
| AGCCATGAGTGCAGTAGTAA+AGG | - | chr8_1:11552054-11552073 | None:intergenic | 45.0% | |
| TTTACTACTGCACTCATGGC+TGG | + | chr8_1:11552053-11552072 | Msa1178650:intron | 45.0% | |
| !! | GGTTGGTGGTCTCTACATAA+TGG | + | chr8_1:11552256-11552275 | Msa1178650:intron | 45.0% |
| GACCCCAAATATCAGCATGA+AGG | - | chr8_1:11552538-11552557 | None:intergenic | 45.0% | |
| ! | TCTTCACCAAAGGTCTTGTG+TGG | + | chr8_1:11552784-11552803 | Msa1178650:intron | 45.0% |
| GAGATGCACAGCATGTTGAA+TGG | - | chr8_1:11552918-11552937 | None:intergenic | 45.0% | |
| ! | TTGTTGGAAAGAAGGGGTGT+GGG | - | chr8_1:11552953-11552972 | None:intergenic | 45.0% |
| TTTGTTGGAAAGAAGGGGTG+TGG | - | chr8_1:11552954-11552973 | None:intergenic | 45.0% | |
| GGTCCTATGTGTGTGTAAAG+TGG | - | chr8_1:11553053-11553072 | None:intergenic | 45.0% | |
| !! | ACGAGCTCTGGAGTCAAATT+TGG | - | chr8_1:11553074-11553093 | None:intergenic | 45.0% |
| ATTTGACTCCAGAGCTCGTA+AGG | + | chr8_1:11553075-11553094 | Msa1178650:intron | 45.0% | |
| !! | AATAGAGGTATTGCGAGTGG+GGG | - | chr8_1:11553356-11553375 | None:intergenic | 45.0% |
| !! | CAATAGAGGTATTGCGAGTG+GGG | - | chr8_1:11553357-11553376 | None:intergenic | 45.0% |
| ACCTCTATTGTATCTTCCCC+TGG | + | chr8_1:11553367-11553386 | Msa1178650:intron | 45.0% | |
| ACCAGGGGAAGATACAATAG+AGG | - | chr8_1:11553371-11553390 | None:intergenic | 45.0% | |
| AGGAGATAAAGGACTACCAG+GGG | - | chr8_1:11553386-11553405 | None:intergenic | 45.0% | |
| GAGGAGATAAAGGACTACCA+GGG | - | chr8_1:11553387-11553406 | None:intergenic | 45.0% | |
| GAAGTGGAAGGAGGAGATAA+AGG | - | chr8_1:11553397-11553416 | None:intergenic | 45.0% | |
| !! | TAGAATGCCTAACGGGTTGA+GGG | - | chr8_1:11553435-11553454 | None:intergenic | 45.0% |
| GTGATAGTCCTGCAAGTAAC+TGG | - | chr8_1:11553476-11553495 | None:intergenic | 45.0% | |
| AAACCCCTATTGGATGTCGT+TGG | + | chr8_1:11553749-11553768 | Msa1178650:intron | 45.0% | |
| AACCCCTATTGGATGTCGTT+GGG | + | chr8_1:11553750-11553769 | Msa1178650:intron | 45.0% | |
| TACCCAACGACATCCAATAG+GGG | - | chr8_1:11553755-11553774 | None:intergenic | 45.0% | |
| ! | AAAGCTCGCCTTGTTGCTAA+AGG | + | chr8_1:11553817-11553836 | Msa1178650:intron | 45.0% |
| GAGTGAAGCCTTTAGCAACA+AGG | - | chr8_1:11553828-11553847 | None:intergenic | 45.0% | |
| AAGGCTTCACTCAAATGGAG+GGG | + | chr8_1:11553836-11553855 | Msa1178650:intron | 45.0% | |
| GGCAAGTAAAACTCTGACAG+TGG | - | chr8_1:11553902-11553921 | None:intergenic | 45.0% | |
| GTATACATGTCTTTACCCCC+TGG | + | chr8_1:11554000-11554019 | Msa1178650:intron | 45.0% | |
| GTGCAATCTGCACACTTTAG+AGG | - | chr8_1:11554052-11554071 | None:intergenic | 45.0% | |
| CAAGGCTGTGAATGTAGAGT+CGG | - | chr8_1:11554193-11554212 | None:intergenic | 45.0% | |
| CATTGGTGAGCTTAGTGGAA+GGG | - | chr8_1:11554452-11554471 | None:intergenic | 45.0% | |
| TCATTGGTGAGCTTAGTGGA+AGG | - | chr8_1:11554453-11554472 | None:intergenic | 45.0% | |
| TCCACTAAGCTCACCAATGA+AGG | + | chr8_1:11554453-11554472 | Msa1178650:intron | 45.0% | |
| !! | ATAAGGAGTGCTGCCTTCAT+TGG | - | chr8_1:11554469-11554488 | None:intergenic | 45.0% |
| GGAAATGAGATTCAAGAGGC+TGG | - | chr8_1:11554596-11554615 | None:intergenic | 45.0% | |
| ATTGTAGCGATGTAGAGGCA+GGG | - | chr8_1:11554677-11554696 | None:intergenic | 45.0% | |
| AATTGTAGCGATGTAGAGGC+AGG | - | chr8_1:11554678-11554697 | None:intergenic | 45.0% | |
| TGAAGCAGAATACAGGGCAT+TGG | + | chr8_1:11554833-11554852 | Msa1178650:intron | 45.0% | |
| TAGGAATGTGTAGGTCAGCA+AGG | - | chr8_1:11554896-11554915 | None:intergenic | 45.0% | |
| AATCCGCATAGTCCAACTTG+AGG | + | chr8_1:11555155-11555174 | Msa1178650:intron | 45.0% | |
| ATCCGCATAGTCCAACTTGA+GGG | + | chr8_1:11555156-11555175 | Msa1178650:intron | 45.0% | |
| TGTGCATACCAAGATCCAGT+AGG | + | chr8_1:11555396-11555415 | Msa1178650:intron | 45.0% | |
| GTGCATACCAAGATCCAGTA+GGG | + | chr8_1:11555397-11555416 | Msa1178650:intron | 45.0% | |
| TGTTTCACCCTACTGGATCT+TGG | - | chr8_1:11555407-11555426 | None:intergenic | 45.0% | |
| ACAGTGGAGATCTGCTTTGA+AGG | + | chr8_1:11555424-11555443 | Msa1178650:intron | 45.0% | |
| CTATCCACACTCCTCCTTTA+TGG | + | chr8_1:11555571-11555590 | Msa1178650:intron | 45.0% | |
| ! | TACACAAAGTGTCATGGCCA+TGG | + | chr8_1:11556445-11556464 | Msa1178650:intron | 45.0% |
| TCAATAGACTGCATGCGTGA+AGG | + | chr8_1:11556524-11556543 | Msa1178650:intron | 45.0% | |
| TCAGAAGATGTTCGTGCCAT+TGG | + | chr8_1:11557114-11557133 | Msa1178650:CDS | 45.0% | |
| ! | GTTCGTGCCATTGGAATTTG+GGG | + | chr8_1:11557123-11557142 | Msa1178650:CDS | 45.0% |
| ! | TTCGTGCCATTGGAATTTGG+GGG | + | chr8_1:11557124-11557143 | Msa1178650:CDS | 45.0% |
| CGTGGTCGTGGAAGATCTAA+TGG | + | chr8_1:11551528-11551547 | Msa1178650:CDS | 50.0% | |
| GGTCGTGGAAGATCTAATGG+AGG | + | chr8_1:11551531-11551550 | Msa1178650:CDS | 50.0% | |
| CGTGGAAGATCTAATGGAGG+AGG | + | chr8_1:11551534-11551553 | Msa1178650:CDS | 50.0% | |
| AGATCTAATGGAGGAGGTCG+TGG | + | chr8_1:11551540-11551559 | Msa1178650:CDS | 50.0% | |
| CTTGCTACATGGCTATCCTC+CGG | + | chr8_1:11551626-11551645 | Msa1178650:CDS | 50.0% | |
| TTGCTACATGGCTATCCTCC+GGG | + | chr8_1:11551627-11551646 | Msa1178650:CDS | 50.0% | |
| ATCAGGGAGCTCAGTGAATC+TGG | + | chr8_1:11551680-11551699 | Msa1178650:CDS | 50.0% | |
| GTGAATCTGGCACCTACTGT+TGG | + | chr8_1:11551693-11551712 | Msa1178650:CDS | 50.0% | |
| !! | GTGTATGGTGGTGGGCTTAA+TGG | - | chr8_1:11552018-11552037 | None:intergenic | 50.0% |
| ! | GGTACAGCTAGATTGGTTGG+TGG | + | chr8_1:11552242-11552261 | Msa1178650:intron | 50.0% |
| GGGTTTCCACACAAGACCTT+TGG | - | chr8_1:11552793-11552812 | None:intergenic | 50.0% | |
| GTAGGAAGACGGGAGGTTTA+TGG | - | chr8_1:11552997-11553016 | None:intergenic | 50.0% | |
| GGAGGAGATAAAGGACTACC+AGG | - | chr8_1:11553388-11553407 | None:intergenic | 50.0% | |
| !! | GTAGAATGCCTAACGGGTTG+AGG | - | chr8_1:11553436-11553455 | None:intergenic | 50.0% |
| AGCTGCACCAATCCATCTTC+AGG | + | chr8_1:11553508-11553527 | Msa1178650:intron | 50.0% | |
| ! | CCAATAGGGGTTTTACCTGC+AGG | - | chr8_1:11553742-11553761 | None:intergenic | 50.0% |
| CCTGCAGGTAAAACCCCTAT+TGG | + | chr8_1:11553739-11553758 | Msa1178650:intron | 50.0% | |
| AGGCTTCACTCAAATGGAGG+GGG | + | chr8_1:11553837-11553856 | Msa1178650:intron | 50.0% | |
| ! | CAGTGGTTAACTTGGCCACA+GGG | - | chr8_1:11553885-11553904 | None:intergenic | 50.0% |
| ! | ACAGTGGTTAACTTGGCCAC+AGG | - | chr8_1:11553886-11553905 | None:intergenic | 50.0% |
| GCACGGAGACTTAAATGAGG+AGG | + | chr8_1:11553978-11553997 | Msa1178650:intron | 50.0% | |
| AGGAGTTGTGGCAGGTTTAG+TGG | - | chr8_1:11554424-11554443 | None:intergenic | 50.0% | |
| AGCTTAGTGGAAGGGTCACA+AGG | - | chr8_1:11554444-11554463 | None:intergenic | 50.0% | |
| GCCTTCATTGGTGAGCTTAG+TGG | - | chr8_1:11554457-11554476 | None:intergenic | 50.0% | |
| TGAGCACACGATTTGCAGCA+TGG | - | chr8_1:11554617-11554636 | None:intergenic | 50.0% | |
| ATGCTGCAAATCGTGTGCTC+AGG | + | chr8_1:11554616-11554635 | Msa1178650:intron | 50.0% | |
| CTTAAATCTGCCCCCTCTCA+AGG | + | chr8_1:11554642-11554661 | Msa1178650:intron | 50.0% | |
| ATGTAGAGGCAGGGAAGAAG+AGG | - | chr8_1:11554668-11554687 | None:intergenic | 50.0% | |
| TTCTGATTGGGCCTGCTGTT+TGG | + | chr8_1:11554713-11554732 | Msa1178650:intron | 50.0% | |
| !! | TTGGCTCTGCTCTTGTCTCA+TGG | + | chr8_1:11554772-11554791 | Msa1178650:intron | 50.0% |
| GAATGTGTAGGTCAGCAAGG+AGG | - | chr8_1:11554893-11554912 | None:intergenic | 50.0% | |
| TGAAACGAGGTGGCATGAAG+TGG | - | chr8_1:11555107-11555126 | None:intergenic | 50.0% | |
| CGGATTGCAAAGTCCCAACT+TGG | - | chr8_1:11555141-11555160 | None:intergenic | 50.0% | |
| TCCGCATAGTCCAACTTGAG+GGG | + | chr8_1:11555157-11555176 | Msa1178650:intron | 50.0% | |
| GGTAATACTCCCCCTCAAGT+TGG | - | chr8_1:11555170-11555189 | None:intergenic | 50.0% | |
| GATCCAGTAGGGTGAAACAG+TGG | + | chr8_1:11555408-11555427 | Msa1178650:intron | 50.0% | |
| TCTCCACTGTTTCACCCTAC+TGG | - | chr8_1:11555414-11555433 | None:intergenic | 50.0% | |
| ! | GATCCCTCATGTTTCTGTGG+CGG | - | chr8_1:11556748-11556767 | None:intergenic | 50.0% |
| TGCCATTGGAATTTGGGGGA+TGG | + | chr8_1:11557128-11557147 | Msa1178650:CDS | 50.0% | |
| ATTGGAATTTGGGGGATGGC+CGG | + | chr8_1:11557132-11557151 | Msa1178650:CDS | 50.0% | |
| GTGGAAACCCCGCAGCAAAA+TGG | + | chr8_1:11552803-11552822 | Msa1178650:intron | 55.0% | |
| TTGAGGTGTAGGAAGACGGG+AGG | - | chr8_1:11553004-11553023 | None:intergenic | 55.0% | |
| GCTCGTAAGGCAGCCTTCAT+TGG | + | chr8_1:11553088-11553107 | Msa1178650:intron | 55.0% | |
| TACCTCTCCCTCAACCCGTT+AGG | + | chr8_1:11553425-11553444 | Msa1178650:intron | 55.0% | |
| !! | GCTCAATGGTGCCATCAGCA+TGG | - | chr8_1:11553792-11553811 | None:intergenic | 55.0% |
| ! | GCGAGCTTTGTAGCGCTCAA+TGG | - | chr8_1:11553806-11553825 | None:intergenic | 55.0% |
| CTTCACTCAAATGGAGGGGG+TGG | + | chr8_1:11553840-11553859 | Msa1178650:intron | 55.0% | |
| CTTGCCTTAGCTGCTGCCAA+AGG | + | chr8_1:11553916-11553935 | Msa1178650:intron | 55.0% | |
| CCATCCTTTGGCAGCAGCTA+AGG | - | chr8_1:11553923-11553942 | None:intergenic | 55.0% | |
| CCTTAGCTGCTGCCAAAGGA+TGG | + | chr8_1:11553920-11553939 | Msa1178650:intron | 55.0% | |
| TGCGAGCAACTTCAAGGCCA+AGG | - | chr8_1:11554332-11554351 | None:intergenic | 55.0% | |
| ! | CCTTGGTGCGAGCAACTTCA+AGG | - | chr8_1:11554338-11554357 | None:intergenic | 55.0% |
| CCTTGAAGTTGCTCGCACCA+AGG | + | chr8_1:11554335-11554354 | Msa1178650:intron | 55.0% | |
| GGAAGGGTCACAAGGAGTTG+TGG | - | chr8_1:11554436-11554455 | None:intergenic | 55.0% | |
| GAAGAAGAGGCCTTGAGAGG+GGG | - | chr8_1:11554655-11554674 | None:intergenic | 55.0% | |
| GGAAGAAGAGGCCTTGAGAG+GGG | - | chr8_1:11554656-11554675 | None:intergenic | 55.0% | |
| GGGAAGAAGAGGCCTTGAGA+GGG | - | chr8_1:11554657-11554676 | None:intergenic | 55.0% | |
| AGGGAAGAAGAGGCCTTGAG+AGG | - | chr8_1:11554658-11554677 | None:intergenic | 55.0% | |
| !! | CCCCCTCAAGTTGGACTATG+CGG | - | chr8_1:11555161-11555180 | None:intergenic | 55.0% |
| CCGCATAGTCCAACTTGAGG+GGG | + | chr8_1:11555158-11555177 | Msa1178650:intron | 55.0% | |
| TGAGCCGCCACAGAAACATG+AGG | + | chr8_1:11556741-11556760 | Msa1178650:intron | 55.0% | |
| GAGCCGCCACAGAAACATGA+GGG | + | chr8_1:11556742-11556761 | Msa1178650:intron | 55.0% | |
| GGCCATCCCCCAAATTCCAA+TGG | - | chr8_1:11557133-11557152 | None:intergenic | 55.0% | |
| ATTTGGGGGATGGCCGGAAT+AGG | + | chr8_1:11557138-11557157 | Msa1178650:CDS | 55.0% | |
| GAAGGCTGCCTTACGAGCTC+TGG | - | chr8_1:11553086-11553105 | None:intergenic | 60.0% | |
| !! | TGCCTAACGGGTTGAGGGAG+AGG | - | chr8_1:11553430-11553449 | None:intergenic | 60.0% |
| GAAGTTGCTCGCACCAAGGC+TGG | + | chr8_1:11554339-11554358 | Msa1178650:intron | 60.0% | |
| GGGTCACAAGGAGTTGTGGC+AGG | - | chr8_1:11554432-11554451 | None:intergenic | 60.0% | |
| TTGCGAGTGGGGGAACCGCT+AGG | - | chr8_1:11553346-11553365 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 11551492 | 11557230 | 11551492 | ID=Msa1178650;Name=Msa1178650 |
| chr8_1 | mRNA | 11551492 | 11557230 | 11551492 | ID=Msa1178650-mRNA-1;Parent=Msa1178650;Name=Msa1178650-mRNA-1;_AED=0.73;_eAED=0.73;_QI=0|0|0|0.66|0.5|0.66|3|0|153 |
| chr8_1 | exon | 11551492 | 11551714 | 11551492 | ID=Msa1178650-mRNA-1:exon:4083;Parent=Msa1178650-mRNA-1 |
| chr8_1 | exon | 11556985 | 11557100 | 11556985 | ID=Msa1178650-mRNA-1:exon:4084;Parent=Msa1178650-mRNA-1 |
| chr8_1 | exon | 11557108 | 11557230 | 11557108 | ID=Msa1178650-mRNA-1:exon:4085;Parent=Msa1178650-mRNA-1 |
| chr8_1 | CDS | 11551492 | 11551714 | 11551492 | ID=Msa1178650-mRNA-1:cds;Parent=Msa1178650-mRNA-1 |
| chr8_1 | CDS | 11556985 | 11557100 | 11556985 | ID=Msa1178650-mRNA-1:cds;Parent=Msa1178650-mRNA-1 |
| chr8_1 | CDS | 11557108 | 11557230 | 11557108 | ID=Msa1178650-mRNA-1:cds;Parent=Msa1178650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
