AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0437690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437690 MtrunA17_Chr3g0115101 90.472 1018 16 4 1 1011 1 944 0.0 1834
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0437690 AT2G39340.1 53.921 1033 386 23 2 1008 37 1005 0.0 957

Find 288 sgRNAs with CRISPR-Local

Find 806 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGGTAATTCATCAAATT+TGG 0.051963 3_3:+1610035 Msa0437690:CDS
TCCTGCTGTGCCGCCTTTAC+AGG 0.137684 3_3:+1610686 Msa0437690:CDS
TGTCGATTGAAGAAGGAATT+AGG 0.171630 3_3:-1608980 None:intergenic
GTACCCTATGCACACGTAAT+TGG 0.176540 3_3:+1614218 Msa0437690:CDS
CGTTCTAAGCGATTTGATTT+AGG 0.215889 3_3:+1616942 Msa0437690:CDS
TTCTTCTTATGATAAATTTC+AGG 0.216493 3_3:+1611153 Msa0437690:CDS
ATTTCCTCCTTTCAGAATAC+TGG 0.222746 3_3:+1610240 Msa0437690:CDS
TCCAAATGACTTTGATAGTT+TGG 0.223926 3_3:-1611124 None:intergenic
CACAATCATATCCACAATAT+TGG 0.236437 3_3:+1610646 Msa0437690:CDS
CTTACAAAGTGCTCCATCTT+TGG 0.247433 3_3:+1611270 Msa0437690:CDS
CTCGATATTCTCTGAAATAA+TGG 0.250084 3_3:-1616750 None:intergenic
GAACTTAAACACCTGCCTTA+TGG 0.252251 3_3:+1619992 Msa0437690:CDS
GATGAATTTGAGAACTAGTT+TGG 0.252769 3_3:-1611063 None:intergenic
ACAAACCTACAGATACATTA+AGG 0.255906 3_3:-1620724 None:intergenic
TCAGTGCCAATCTCAGTTAA+AGG 0.258907 3_3:+1619000 Msa0437690:intron
AACTTAAACACCTGCCTTAT+GGG 0.259233 3_3:+1619993 Msa0437690:CDS
CTGCTTCTTAAATGGCCTTT+GGG 0.260755 3_3:-1616781 None:intergenic
ATAATTAAATACTATGTAAA+AGG 0.272883 3_3:+1620829 Msa0437690:three_prime_UTR
TTGCGTATCCGTTGCTGTTT+TGG 0.287700 3_3:-1610335 None:intergenic
GTAGTACCTTGACTGTTAAT+TGG 0.288051 3_3:-1617416 None:intergenic
CCCGGTTGGCACTGGAAGTT+GGG 0.289514 3_3:+1617777 Msa0437690:CDS
GGGTGCTTACCATTCTTTCT+TGG 0.292774 3_3:+1620902 Msa0437690:three_prime_UTR
CCAGAACCTATTCTCAAATC+TGG 0.295243 3_3:+1620788 Msa0437690:three_prime_UTR
GCGGCTGCGGCTGCGGATGC+TGG 0.296808 3_3:-1609972 None:intergenic
GCAAGACGCTGCTTCTTAAA+TGG 0.300355 3_3:-1616789 None:intergenic
CTTTGATAGTTTGGTTGAAT+AGG 0.300385 3_3:-1611115 None:intergenic
TTAACTGGTCACATTTATAA+AGG 0.309288 3_3:-1617353 None:intergenic
CCGTGGGCCACAGCATCTTC+TGG 0.309619 3_3:-1620636 None:intergenic
TGTAAAAGGAAAATAGAAAA+TGG 0.310413 3_3:+1620843 Msa0437690:three_prime_UTR
GTTTCTACTGCTCATGAAAA+TGG 0.311872 3_3:+1616816 Msa0437690:CDS
ATTTATAAAGGTAATTCCTT+TGG 0.313444 3_3:-1617341 None:intergenic
GTCCCAAGTTCATCTACTTT+GGG 0.314090 3_3:+1610558 Msa0437690:CDS
GCTGGTAATTCATCAAATTT+GGG 0.328650 3_3:+1610036 Msa0437690:CDS
ATTAGGGTTCGTTGTAGATT+AGG 0.333676 3_3:-1608963 None:intergenic
ACCAAACTATCAAAGTCATT+TGG 0.335372 3_3:+1611123 Msa0437690:CDS
CGGGATCTGGCGCCGATGTT+AGG 0.338007 3_3:-1617160 None:intergenic
TCTGCATCTGCCTCCGGCAT+TGG 0.339714 3_3:-1614259 None:intergenic
TTGGTTGAATAGGATTAGTT+TGG 0.345571 3_3:-1611105 None:intergenic
GTCGATTGAAGAAGGAATTA+GGG 0.356758 3_3:-1608979 None:intergenic
CTGCATCTGCCTCCGGCATT+GGG 0.356862 3_3:-1614258 None:intergenic
TTAGGGTTCGTTGTAGATTA+GGG 0.359293 3_3:-1608962 None:intergenic
TTTATAAAGGTAATTCCTTT+GGG 0.360413 3_3:-1617340 None:intergenic
CCTACGGGCGGCTGCGGCTG+CGG 0.360451 3_3:-1609979 None:intergenic
TCTTCTAATCCATATGGTTA+TGG 0.361279 3_3:+1610108 Msa0437690:CDS
TGTCCCAAGTTCATCTACTT+TGG 0.362411 3_3:+1610557 Msa0437690:CDS
CTGGTTCTGAAGCCGTTTCA+TGG 0.363728 3_3:+1609893 Msa0437690:CDS
GCTGCTTCTTAAATGGCCTT+TGG 0.363898 3_3:-1616782 None:intergenic
TCCTACGTATCTCAGGTTCT+AGG 0.367060 3_3:+1620168 Msa0437690:CDS
ACAGACAAGTTCTCTGTCCC+TGG 0.368424 3_3:-1610537 None:intergenic
GTATTCTGAAAGGAGGAAAT+AGG 0.369237 3_3:-1610237 None:intergenic
ATGCACACGTAATTGGGATA+TGG 0.369705 3_3:+1614225 Msa0437690:CDS
CTTGGCGAATAGACTTTAAC+TGG 0.370716 3_3:-1617368 None:intergenic
ATTGTAGTCAGAATAGAAAA+AGG 0.378337 3_3:+1620750 Msa0437690:three_prime_UTR
GCCCGGTTGGCACTGGAAGT+TGG 0.378623 3_3:+1617776 Msa0437690:CDS
AGGGATCGAAGGCTCGTATA+TGG 0.383381 3_3:+1619036 Msa0437690:CDS
CTAGTCCCAGATTTGAGAAT+AGG 0.387823 3_3:-1620794 None:intergenic
ATGAATTTGAGAACTAGTTT+GGG 0.391251 3_3:-1611062 None:intergenic
ACAATCATATCCACAATATT+GGG 0.394547 3_3:+1610647 Msa0437690:CDS
TACCCTATGCACACGTAATT+GGG 0.398034 3_3:+1614219 Msa0437690:CDS
TGTGTATTCGTTGCACAGTT+AGG 0.398571 3_3:-1617392 None:intergenic
CCCCAACTTCCAGTGCCAAC+CGG 0.400824 3_3:-1617778 None:intergenic
GATATTACGGTGGCGGGATC+TGG 0.401090 3_3:-1617173 None:intergenic
TTCGTTGCACAGTTAGGTCT+TGG 0.401797 3_3:-1617386 None:intergenic
GGGCACAACTGACTTCTGTT+TGG 0.402893 3_3:-1610515 None:intergenic
GTGGTGGTCATGATGATTAC+TGG 0.404253 3_3:+1611029 Msa0437690:CDS
ACCTGTAAAGGCGGCACAGC+AGG 0.410044 3_3:-1610687 None:intergenic
CAAAGATGGAGCACTTTGTA+AGG 0.411359 3_3:-1611269 None:intergenic
GCAAATTCTTCTAATCCATA+TGG 0.411362 3_3:+1610102 Msa0437690:CDS
TGAGAAAGAGGCCACTGCTT+TGG 0.411832 3_3:+1620227 Msa0437690:CDS
AAAGAGCCTTTAACTGAGAT+TGG 0.414274 3_3:-1619006 None:intergenic
GCCACAGCATCTTCTGGCTC+TGG 0.417167 3_3:-1620630 None:intergenic
GCTGCGGATGCTGGTCATAC+TGG 0.421733 3_3:-1609963 None:intergenic
TTTATTGCAACCATGACATC+TGG 0.422025 3_3:+1609874 Msa0437690:exon
CAACAGAAGGGCTAGTGCTC+TGG 0.424865 3_3:+1617028 Msa0437690:CDS
TGCTGCTAATTCAATACTTA+AGG 0.425260 3_3:+1611465 Msa0437690:CDS
CTTCAGTGCTGCACTGGATG+TGG 0.425420 3_3:-1611386 None:intergenic
AAGCTAACCTGATTATATTC+AGG 0.427569 3_3:-1617806 None:intergenic
GTCAAATTTGAAGCAATTCG+AGG 0.427572 3_3:-1611331 None:intergenic
ATCAGCCACAATACAATCAA+TGG 0.427782 3_3:+1610478 Msa0437690:CDS
CTTAGCAAAAGCTTTGATAA+TGG 0.428213 3_3:+1617053 Msa0437690:CDS
ACCGGCTTCTCCTCTGGTAA+TGG 0.429110 3_3:-1615130 None:intergenic
AAAATATAAATTTGCAATGA+AGG 0.429184 3_3:-1608552 None:intergenic
TTACCATTCTTTCTTGGTAA+AGG 0.430009 3_3:+1620908 Msa0437690:three_prime_UTR
CCAGATTTGAGAATAGGTTC+TGG 0.434151 3_3:-1620788 None:intergenic
AACTCATGCCCGGTTGGCAC+TGG 0.434911 3_3:+1617769 Msa0437690:CDS
TTCACCTTGCCATTGATGAT+AGG 0.435816 3_3:-1619117 None:intergenic
GCAGGAGCAGGAGCAGGAAC+AGG 0.436399 3_3:-1610585 None:intergenic
GTTCGTGCAGCTGTAACTTC+AGG 0.440910 3_3:+1619930 Msa0437690:CDS
AACATAGCCACGCAAAGACT+TGG 0.445716 3_3:-1612834 None:intergenic
GACACAGGATGATGGTTAAC+CGG 0.448056 3_3:-1615211 None:intergenic
TTATTGTCTGCATCTGCCTC+CGG 0.449792 3_3:-1614265 None:intergenic
AGGAAGAGGGAAGTACAAAT+TGG 0.449984 3_3:-1611209 None:intergenic
TGGGATGCTCTTACTGTAAA+GGG 0.453003 3_3:+1617104 Msa0437690:CDS
GAAGCAATTCGAGGATTTGT+TGG 0.453082 3_3:-1611322 None:intergenic
CAAAGACTTGGGAAACATAC+CGG 0.453318 3_3:-1612822 None:intergenic
ATACTGTAAAATACAGTAGT+TGG 0.455481 3_3:+1615182 Msa0437690:CDS
ATACTGTAAAATACAGTAGT+TGG 0.455481 3_3:+1615245 Msa0437690:CDS
TGGCTATGTTGAAAGAGCTT+TGG 0.455514 3_3:+1612847 Msa0437690:CDS
AGGCGGCACAGCAGGAGTGC+TGG 0.456913 3_3:-1610679 None:intergenic
GGCTGAGAATAAGCAGGATT+AGG 0.457090 3_3:-1610177 None:intergenic
ATTGTTATCAGCAATTATAC+TGG 0.462204 3_3:-1620283 None:intergenic
CAGAAATTGTCGATTGAAGA+AGG 0.463195 3_3:-1608987 None:intergenic
GACACAGGATGATGGTCAAC+CGG 0.463264 3_3:-1615148 None:intergenic
ATAAGGCAGGTGTTTAAGTT+CGG 0.463914 3_3:-1619990 None:intergenic
TAAGCAAATGGCAGCATGCC+AGG 0.464128 3_3:+1612886 Msa0437690:CDS
CAGATTTGAGAATAGGTTCT+GGG 0.465177 3_3:-1620787 None:intergenic
CAACCCAAAGTAGATGAACT+TGG 0.465843 3_3:-1610561 None:intergenic
CAGAATACTGGGTCTAATGC+TGG 0.466623 3_3:+1610252 Msa0437690:CDS
AGCAGGCTTCAGTGCTGCAC+TGG 0.467043 3_3:-1611392 None:intergenic
TCCAGTAGCTCTTATAGTAC+TGG 0.469410 3_3:+1610432 Msa0437690:CDS
TGGTCAACCGGCTTCTCCTC+TGG 0.472769 3_3:-1615136 None:intergenic
ACCATCTTGAACGCTTCCTA+CGG 0.473101 3_3:-1609995 None:intergenic
ACCAGTACTATAAGAGCTAC+TGG 0.473490 3_3:-1610433 None:intergenic
TTTCCTCCTTTCAGAATACT+GGG 0.474082 3_3:+1610241 Msa0437690:CDS
GAATGGCATGCAGGTGGTAG+TGG 0.477039 3_3:+1616680 Msa0437690:intron
ACAGAGAGAAATATAGTGCT+TGG 0.477191 3_3:-1608606 None:intergenic
AAAATCATTAACAGCAAGGT+TGG 0.480465 3_3:-1620664 None:intergenic
CTGGGATGCTCTTACTGTAA+AGG 0.481316 3_3:+1617103 Msa0437690:CDS
TGTCCTTTACCAAGAAAGAA+TGG 0.483538 3_3:-1620911 None:intergenic
ACCTGAGATACGTAGGAAAC+GGG 0.485335 3_3:-1620162 None:intergenic
TATGCAGTAAAACGTTGAAA+GGG 0.486573 3_3:-1608660 None:intergenic
TACTGTAAAGGGTACCTGCC+AGG 0.488396 3_3:+1617115 Msa0437690:CDS
GCCTAATGAAAAGGATAGAA+AGG 0.490421 3_3:+1615270 Msa0437690:CDS
AAAACGTTGAAAGGGGTTGT+TGG 0.490933 3_3:-1608652 None:intergenic
AACCTGAGATACGTAGGAAA+CGG 0.491900 3_3:-1620163 None:intergenic
CCACTAGTAGCTGCAGGAGC+AGG 0.492394 3_3:-1610597 None:intergenic
ACTTTGGCAATACAGAATCA+TGG 0.492394 3_3:-1615069 None:intergenic
TGGGTCGTAATTTGAGAAGA+AGG 0.493609 3_3:-1608586 None:intergenic
CCGCAGCCGCAGCCGCCCGT+AGG 0.495074 3_3:+1609979 Msa0437690:CDS
TTAAAGGCTCTTTATGCTGA+AGG 0.495998 3_3:+1619016 Msa0437690:CDS
AAGGAGGAAATAGGCTGATA+AGG 0.496384 3_3:-1610228 None:intergenic
ACCCGTTTCCTACGTATCTC+AGG 0.496736 3_3:+1620161 Msa0437690:CDS
ACAGAAGTCAGTTGTGCCCC+AGG 0.496956 3_3:+1610519 Msa0437690:CDS
CCCGTGCTGCCATAACCATA+TGG 0.497830 3_3:-1610117 None:intergenic
CAAACCTACAGATACATTAA+GGG 0.498360 3_3:-1620723 None:intergenic
TGAAGCAAATGATGAGAAAG+AGG 0.498622 3_3:+1620215 Msa0437690:CDS
TTTATCAATACTAACCCATA+AGG 0.501651 3_3:-1620007 None:intergenic
TCTGTGGCGTAACTTGTATA+CGG 0.502129 3_3:-1610408 None:intergenic
GGACCTGCCTGAATATAATC+AGG 0.505112 3_3:+1617799 Msa0437690:CDS
CAGAGAGAAATATAGTGCTT+GGG 0.507664 3_3:-1608605 None:intergenic
ACGCTTCCTACGGGCGGCTG+CGG 0.508637 3_3:-1609985 None:intergenic
CCCAACTTCCAGTGCCAACC+GGG 0.510017 3_3:-1617777 None:intergenic
CAGAACCTATTCTCAAATCT+GGG 0.511748 3_3:+1620789 Msa0437690:three_prime_UTR
GTAGGAGCATATCAAAATAC+AGG 0.512154 3_3:+1610201 Msa0437690:CDS
TGAAGCTGTAAAACATGCTC+TGG 0.512592 3_3:+1619905 Msa0437690:CDS
TAGTTGGGTGCCTAATGAAA+AGG 0.512618 3_3:+1615261 Msa0437690:CDS
TTGTAAAGATGATAAGCAAA+TGG 0.513557 3_3:+1612874 Msa0437690:CDS
TACGTAGCAGAAATCGTTGA+AGG 0.515406 3_3:-1609046 None:intergenic
GTTATCTGACGAAGCAAAGA+AGG 0.515818 3_3:+1619881 Msa0437690:CDS
CCATATGGTTATGGCAGCAC+GGG 0.516635 3_3:+1610117 Msa0437690:CDS
GCAACCCTTAATGTATCTGT+AGG 0.517344 3_3:+1620719 Msa0437690:three_prime_UTR
GTAGCTGCAGGAGCAGGAGC+AGG 0.517946 3_3:-1610591 None:intergenic
TTAATTAAGTAATTAACAGA+AGG 0.521008 3_3:-1608706 None:intergenic
AAAGGAGATATTACGGTGGC+GGG 0.521108 3_3:-1617179 None:intergenic
ATCCCAATTACGTGTGCATA+GGG 0.522319 3_3:-1614221 None:intergenic
AGTGATATTCAAACCTGTAA+AGG 0.522822 3_3:-1610699 None:intergenic
TTAGATGATAGTTTCTCAGT+TGG 0.523740 3_3:-1611439 None:intergenic
CAGACAAGTTCTCTGTCCCT+GGG 0.524755 3_3:-1610536 None:intergenic
TCGTAATTTGAGAAGAAGGT+GGG 0.524937 3_3:-1608582 None:intergenic
TGCATCTAGTGATAGTGATA+AGG 0.526272 3_3:+1616842 Msa0437690:CDS
TACTTGTTGACACAGGATGA+TGG 0.527108 3_3:-1615219 None:intergenic
AATGAAACAGCAATATAAGC+AGG 0.527678 3_3:-1611409 None:intergenic
CCTGCATGTGCCGATCATAT+CGG 0.528944 3_3:+1620130 Msa0437690:CDS
CAAAGTGTATCATCAGTTGC+TGG 0.530028 3_3:+1610018 Msa0437690:CDS
CCATCTTGAACGCTTCCTAC+GGG 0.530099 3_3:-1609994 None:intergenic
CCACCACTATTTACTGCAGC+AGG 0.530413 3_3:-1611013 None:intergenic
GCTCTGAACGTTCCATGAAA+CGG 0.532106 3_3:-1609905 None:intergenic
CCAGAAGATGCTGTGGCCCA+CGG 0.533746 3_3:+1620636 Msa0437690:CDS
TCCTTTGCAGATGATCACTA+AGG 0.534413 3_3:+1614183 Msa0437690:intron
GACTCTTGCACCCAATATTG+TGG 0.535657 3_3:-1610657 None:intergenic
TACTTGTTGACACAGGATGA+TGG 0.536480 3_3:-1615156 None:intergenic
GCCATTACCAGAGGAGAAGC+CGG 0.537479 3_3:+1615129 Msa0437690:CDS
TACTGTAAAATACAGTAGTT+GGG 0.538465 3_3:+1615183 Msa0437690:CDS
TACTGTAAAATACAGTAGTT+GGG 0.538465 3_3:+1615246 Msa0437690:CDS
TTATGCAGTAAAACGTTGAA+AGG 0.540436 3_3:-1608661 None:intergenic
CAGAGAACTCCTATCATCAA+TGG 0.540998 3_3:+1619108 Msa0437690:CDS
ACGCAAATCAAGCGCCGGCA+TGG 0.541797 3_3:+1610352 Msa0437690:CDS
CCGATATGATCGGCACATGC+AGG 0.542062 3_3:-1620130 None:intergenic
GGCGCCAGATTCACCTGTTG+AGG 0.542468 3_3:-1611247 None:intergenic
TGCTTCTTAAATGGCCTTTG+GGG 0.542792 3_3:-1616780 None:intergenic
TATCCCAATTACGTGTGCAT+AGG 0.545696 3_3:-1614222 None:intergenic
TCAGCCACAATACAATCAAT+GGG 0.547636 3_3:+1610479 Msa0437690:CDS
GCGCCAGATTCACCTGTTGA+GGG 0.548174 3_3:-1611246 None:intergenic
TGCTGGTCATACTGGTAGGT+CGG 0.548260 3_3:-1609955 None:intergenic
ATACAGTAGTTGGGTGCCGC+CGG 0.548866 3_3:+1615192 Msa0437690:CDS
TCACCTCTTTCATGACAGCC+TGG 0.549405 3_3:-1612904 None:intergenic
CTGGAAACTTGTACAACAGA+AGG 0.551854 3_3:+1617015 Msa0437690:CDS
TGGTGTCAGCAAAGCTGTTG+AGG 0.553579 3_3:+1617073 Msa0437690:CDS
TGCATATTATTCTGCTGCAA+TGG 0.553825 3_3:+1616878 Msa0437690:CDS
CGGATGCTGGTCATACTGGT+AGG 0.555373 3_3:-1609959 None:intergenic
CCTGCTGATTATCAGACCAC+TGG 0.555735 3_3:+1610306 Msa0437690:CDS
TCCATATGGTTATGGCAGCA+CGG 0.557054 3_3:+1610116 Msa0437690:CDS
AAGCTGTTGAGGATATTGAC+TGG 0.559177 3_3:+1617084 Msa0437690:CDS
GCCAGATTCACCTGTTGAGG+GGG 0.559645 3_3:-1611244 None:intergenic
TGTGGAGGCTGGTAATTTGA+AGG 0.560594 3_3:-1610627 None:intergenic
AGAGCAAGGAAGACAGTTGG+AGG 0.560733 3_3:+1616712 Msa0437690:CDS
AAAAGGAGATATTACGGTGG+CGG 0.561173 3_3:-1617180 None:intergenic
CCTGCTCCTGCAGCTACTAG+TGG 0.561241 3_3:+1610597 Msa0437690:CDS
CCAGTGGTCTGATAATCAGC+AGG 0.561824 3_3:-1610306 None:intergenic
AAGAGAGCAAGGAAGACAGT+TGG 0.562299 3_3:+1616709 Msa0437690:CDS
TAACCTGATTATATTCAGGC+AGG 0.562357 3_3:-1617802 None:intergenic
CAAATCTGGGACTAGTGTCA+TGG 0.564251 3_3:+1620802 Msa0437690:three_prime_UTR
TAAAGGCTCTTTATGCTGAA+GGG 0.564963 3_3:+1619017 Msa0437690:CDS
GTGGATATGATTGTGGAGGC+TGG 0.565484 3_3:-1610638 None:intergenic
GCCTCCGGCATTGGGAAGAG+TGG 0.566459 3_3:-1614250 None:intergenic
TAATTAAGTAATTAACAGAA+GGG 0.567138 3_3:-1608705 None:intergenic
GTCCTAGACGATCTAAAAGT+AGG 0.569257 3_3:+1615101 Msa0437690:CDS
CAGCCTGCTGCAGTAAATAG+TGG 0.570492 3_3:+1611010 Msa0437690:intron
GGAACCACTCTTCCCAATGC+CGG 0.571157 3_3:+1614246 Msa0437690:CDS
CTTTGGAAGAGTGTTTAGAA+TGG 0.571807 3_3:+1620244 Msa0437690:CDS
GCATAACCACTAGTAGCTGC+AGG 0.571910 3_3:-1610603 None:intergenic
GTTCAGAGCTCCACAGCGAA+TGG 0.572983 3_3:+1609919 Msa0437690:CDS
CCTACAGGCTGAGAATAAGC+AGG 0.576409 3_3:-1610183 None:intergenic
CGGATACGCAAATCAAGCGC+CGG 0.577868 3_3:+1610347 Msa0437690:CDS
GCGATACCTGCGCCTAACAT+CGG 0.579158 3_3:+1617148 Msa0437690:CDS
CTGGCGCCGATGTTAGGCGC+AGG 0.581743 3_3:-1617154 None:intergenic
GGCTTCAGAACCAGATGTCA+TGG 0.581974 3_3:-1609884 None:intergenic
AGTATAATTGCTGATAACAA+TGG 0.582252 3_3:+1620285 Msa0437690:CDS
CGCCAGATTCACCTGTTGAG+GGG 0.582343 3_3:-1611245 None:intergenic
GTACGGTTGGCCGATATGAT+CGG 0.583535 3_3:-1620140 None:intergenic
ATGCCAGGCTGTCATGAAAG+AGG 0.584265 3_3:+1612901 Msa0437690:CDS
GTCGTAATTTGAGAAGAAGG+TGG 0.585323 3_3:-1608583 None:intergenic
CAATATTGTGGATATGATTG+TGG 0.585569 3_3:-1610645 None:intergenic
AGGTATATGAAACTCATGCC+CGG 0.586101 3_3:+1617759 Msa0437690:intron
GCAATAAAGATGTCTGATGT+CGG 0.586640 3_3:-1609859 None:intergenic
AGCAAGGTTGGCATCTCCGT+GGG 0.587369 3_3:-1620652 None:intergenic
ACATAGCCACGCAAAGACTT+GGG 0.587714 3_3:-1612833 None:intergenic
AACTCCTATCATCAATGGCA+AGG 0.587936 3_3:+1619113 Msa0437690:CDS
AAAGACTTGGGAAACATACC+GGG 0.594352 3_3:-1612821 None:intergenic
TAACTGTCATTGTTCCATGC+CGG 0.594398 3_3:-1610366 None:intergenic
TCAATACTAACCCATAAGGC+AGG 0.596141 3_3:-1620003 None:intergenic
AGTGGAAAACAAAGAGAGCA+AGG 0.597172 3_3:+1616698 Msa0437690:CDS
CCTGCTTATTCTCAGCCTGT+AGG 0.600180 3_3:+1610183 Msa0437690:CDS
CTAGACGATCTAAAAGTAGG+TGG 0.601709 3_3:+1615104 Msa0437690:CDS
ATTCTTAAATCTGCAAACAA+CGG 0.602162 3_3:+1609012 Msa0437690:five_prime_UTR
CTTTATGCTGAAGGGATCGA+AGG 0.603964 3_3:+1619025 Msa0437690:CDS
ATATGAAACTCATGCCCGGT+TGG 0.604591 3_3:+1617763 Msa0437690:CDS
ATGCAGTAAAACGTTGAAAG+GGG 0.609817 3_3:-1608659 None:intergenic
GAACAGAAAATAATCACTCA+AGG 0.611292 3_3:+1616976 Msa0437690:CDS
TCCGCCCATTGATTGTATTG+TGG 0.611868 3_3:-1610483 None:intergenic
CGTAATTTGAGAAGAAGGTG+GGG 0.614238 3_3:-1608581 None:intergenic
CTCTGGCACAAATAAACTAG+AGG 0.614360 3_3:-1620613 None:intergenic
AACCCAAAGTAGATGAACTT+GGG 0.614812 3_3:-1610560 None:intergenic
ATGTTTCCCAAGTCTTTGCG+TGG 0.615774 3_3:+1612827 Msa0437690:CDS
TTAGAATGGTTGAAAGCTCA+TGG 0.616091 3_3:+1620258 Msa0437690:CDS
CAGAAGACAGTATCTTCTCA+AGG 0.616801 3_3:+1611184 Msa0437690:CDS
CATGATGATTACTGGAAACA+TGG 0.617331 3_3:+1611037 Msa0437690:CDS
TAGATTAGGGTTCTTCGATG+CGG 0.618633 3_3:-1608949 None:intergenic
TAATGGTTCAAAATTCCCAA+AGG 0.619992 3_3:+1617325 Msa0437690:CDS
ACACAACCAATTAACAGTCA+AGG 0.621344 3_3:+1617410 Msa0437690:CDS
GCTGATTATCAGACCACTGG+AGG 0.623549 3_3:+1610309 Msa0437690:CDS
ATAAGTGCTTGAATAACTTG+CGG 0.624859 3_3:-1610277 None:intergenic
ATAAGAGCTACTGGAATCTG+TGG 0.625635 3_3:-1610424 None:intergenic
CCGGTTGGCACTGGAAGTTG+GGG 0.625846 3_3:+1617778 Msa0437690:CDS
CCCGTAGGAAGCGTTCAAGA+TGG 0.628957 3_3:+1609994 Msa0437690:CDS
GCGTATGCATTATAATCTTG+TGG 0.629965 3_3:-1610072 None:intergenic
AGATACGTAGGAAACGGGTA+CGG 0.629992 3_3:-1620157 None:intergenic
AAAGATGGAGCACTTTGTAA+GGG 0.633740 3_3:-1611268 None:intergenic
ACGTAGGAAACGGGTACGGT+TGG 0.636510 3_3:-1620153 None:intergenic
AGAATAAATTCCATTCGCTG+TGG 0.636759 3_3:-1609929 None:intergenic
TGATAACAATGGAGACATGA+TGG 0.639004 3_3:+1620296 Msa0437690:CDS
AGACCCAGTATTCTGAAAGG+AGG 0.639972 3_3:-1610244 None:intergenic
TAGACGATCTAAAAGTAGGT+GGG 0.640865 3_3:+1615105 Msa0437690:CDS
TAAACACTCTTCCAAAGCAG+TGG 0.643140 3_3:-1620238 None:intergenic
TGGAAACTTGTACAACAGAA+GGG 0.643768 3_3:+1617016 Msa0437690:CDS
CAGCAAGGTTGGCATCTCCG+TGG 0.644377 3_3:-1620653 None:intergenic
GGGGTTGTTGGCGAAAACGA+TGG 0.646102 3_3:-1608640 None:intergenic
CAGAAGTCAGTTGTGCCCCA+GGG 0.647530 3_3:+1610520 Msa0437690:CDS
ATTAGACCCAGTATTCTGAA+AGG 0.648423 3_3:-1610247 None:intergenic
GCCAGAGCCAGAAGATGCTG+TGG 0.649747 3_3:+1620629 Msa0437690:CDS
AGCTGTTGAGGATATTGACT+GGG 0.653712 3_3:+1617085 Msa0437690:CDS
GTATCATTACTTGTTGACAC+AGG 0.654941 3_3:-1615163 None:intergenic
GTATCATTACTTGTTGACAC+AGG 0.654941 3_3:-1615226 None:intergenic
ACCACTCTTCCCAATGCCGG+AGG 0.658673 3_3:+1614249 Msa0437690:CDS
GATATTCAAACCTGTAAAGG+CGG 0.659423 3_3:-1610696 None:intergenic
TATCGAGTAAAGCTCCCCAA+AGG 0.663783 3_3:+1616766 Msa0437690:CDS
GTAACTTGTATACGGATGAG+AGG 0.666117 3_3:-1610400 None:intergenic
GGAGGTTACCAAAACAGCAA+CGG 0.667976 3_3:+1610327 Msa0437690:CDS
TAGGTGGGAGCCATTACCAG+AGG 0.672885 3_3:+1615120 Msa0437690:CDS
TCCTAGAACCTGAGATACGT+AGG 0.679539 3_3:-1620169 None:intergenic
TGATTATCAAAGGTCATACA+CGG 0.680744 3_3:-1620868 None:intergenic
CCTGCTGCAGTAAATAGTGG+TGG 0.681233 3_3:+1611013 Msa0437690:CDS
ACAGGATGATGGTTAACCGG+CGG 0.700654 3_3:-1615208 None:intergenic
GCCACAATACAATCAATGGG+CGG 0.709329 3_3:+1610482 Msa0437690:CDS
AGACAAGTTCTCTGTCCCTG+GGG 0.709687 3_3:-1610535 None:intergenic
TCTTGAACGCTTCCTACGGG+CGG 0.710978 3_3:-1609991 None:intergenic
TATTGTGGATATGATTGTGG+AGG 0.718936 3_3:-1610642 None:intergenic
GTATTGTGGCTGATACTGCA+CGG 0.734393 3_3:-1610469 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTATCTTTTAGTATAT+TGG + chr3_3:1610870-1610889 Msa0437690:intron 10.0%
!! TAAATAAAAAATAAATGAAC+TGG - chr3_3:1611561-1611580 None:intergenic 10.0%
!!! AAAAAAAAGTTTTATAAACA+AGG - chr3_3:1611984-1612003 None:intergenic 10.0%
!! AATGAAAACAATAATATATT+TGG + chr3_3:1613643-1613662 Msa0437690:intron 10.0%
!! ATGAAAACAATAATATATTT+GGG + chr3_3:1613644-1613663 Msa0437690:intron 10.0%
!! TCAATTAATATTTGTAAAAA+AGG + chr3_3:1614657-1614676 Msa0437690:intron 10.0%
!! AAAACTATAATAAAAATTCA+AGG - chr3_3:1614898-1614917 None:intergenic 10.0%
!! AAAACTTATAATTAATTTAG+GGG + chr3_3:1616314-1616333 Msa0437690:intron 10.0%
!! TATTGTCAAATAAAATTTAA+AGG - chr3_3:1619394-1619413 None:intergenic 10.0%
!! TACTAATAATAATAATTTCA+AGG - chr3_3:1619564-1619583 None:intergenic 10.0%
!! ATAATTAAATACTATGTAAA+AGG + chr3_3:1620829-1620848 Msa0437690:three_prime_UTR 10.0%
!! AAAATATAAATTTGCAATGA+AGG - chr3_3:1608555-1608574 None:intergenic 15.0%
!! TAATTAAGTAATTAACAGAA+GGG - chr3_3:1608708-1608727 None:intergenic 15.0%
!! TTAATTAAGTAATTAACAGA+AGG - chr3_3:1608709-1608728 None:intergenic 15.0%
!!! GGTTTTATAATTTATTTGAT+CGG - chr3_3:1609479-1609498 None:intergenic 15.0%
!! TAATAAGTAGATAGAAATTA+AGG + chr3_3:1611648-1611667 Msa0437690:intron 15.0%
!!! TTGTTATTTTTAGTGAAAAT+AGG + chr3_3:1611762-1611781 Msa0437690:intron 15.0%
!!! AATAATATAGGACATTATTT+TGG + chr3_3:1612041-1612060 Msa0437690:intron 15.0%
!!! TTGAATCTTGAATTATTTTA+TGG + chr3_3:1612498-1612517 Msa0437690:intron 15.0%
!!! TTTAAACTGTAATCAATTTT+TGG - chr3_3:1612730-1612749 None:intergenic 15.0%
!! AGATACAGTAAAAAAAATAT+AGG - chr3_3:1613478-1613497 None:intergenic 15.0%
!! GTAAACTAATATACTAAATT+AGG - chr3_3:1614052-1614071 None:intergenic 15.0%
!!! AATTTAGTATATTAGTTTAC+AGG + chr3_3:1614052-1614071 Msa0437690:intron 15.0%
!!! AAAAGAAAGCATAAAAAAAA+AGG - chr3_3:1615857-1615876 None:intergenic 15.0%
!!! AATACATAAACTATTTTCTT+TGG + chr3_3:1615889-1615908 Msa0437690:intron 15.0%
!! ACATAATAAGCATTTATTTA+GGG - chr3_3:1615971-1615990 None:intergenic 15.0%
!! AACATAATAAGCATTTATTT+AGG - chr3_3:1615972-1615991 None:intergenic 15.0%
!! AATAACACTTATGTTAATTT+AGG + chr3_3:1616396-1616415 Msa0437690:intron 15.0%
!! ATAACACTTATGTTAATTTA+GGG + chr3_3:1616397-1616416 Msa0437690:intron 15.0%
!!! AAAAAAAGTATCCATATTAA+GGG - chr3_3:1616522-1616541 None:intergenic 15.0%
!!! AAAAAAAAGTATCCATATTA+AGG - chr3_3:1616523-1616542 None:intergenic 15.0%
!! AATAAATGAAGTAAAAGAAA+GGG - chr3_3:1617571-1617590 None:intergenic 15.0%
!! AAATAAATGAAGTAAAAGAA+AGG - chr3_3:1617572-1617591 None:intergenic 15.0%
!! AATTATTAACGAATGTTTAT+GGG - chr3_3:1619289-1619308 None:intergenic 15.0%
!! AAATTATTAACGAATGTTTA+TGG - chr3_3:1619290-1619309 None:intergenic 15.0%
!! TATATTTATCAAGCAAATAA+AGG + chr3_3:1619319-1619338 Msa0437690:intron 15.0%
!! TATTATTATTAGTAGAAAAC+TGG + chr3_3:1619570-1619589 Msa0437690:intron 15.0%
!!! AAATTTATTGCAATTTTGTT+TGG + chr3_3:1619601-1619620 Msa0437690:intron 15.0%
!!! AATTTATTGCAATTTTGTTT+GGG + chr3_3:1619602-1619621 Msa0437690:intron 15.0%
!! GGTAAATTCTAAATTAATAT+GGG - chr3_3:1620491-1620510 None:intergenic 15.0%
!! AGGTAAATTCTAAATTAATA+TGG - chr3_3:1620492-1620511 None:intergenic 15.0%
!! AAAAAACAAATGATTATCAA+AGG - chr3_3:1620881-1620900 None:intergenic 15.0%
!!! TTTGATAATCATTTGTTTTT+TGG + chr3_3:1620880-1620899 Msa0437690:three_prime_UTR 15.0%
!!! TTGATAATCATTTGTTTTTT+GGG + chr3_3:1620881-1620900 Msa0437690:three_prime_UTR 15.0%
!!! TTTTTTTCGACGAATTATTA+GGG + chr3_3:1608873-1608892 Msa0437690:five_prime_UTR 20.0%
!!! GATATTTTTGGAGATATTTT+AGG - chr3_3:1609532-1609551 None:intergenic 20.0%
!! TATCTCCAAAAATATCTATT+TGG + chr3_3:1609536-1609555 Msa0437690:intron 20.0%
!!! ACATACCAAATAGATATTTT+TGG - chr3_3:1609544-1609563 None:intergenic 20.0%
!! TCATACCAAATAGATATTTA+CGG - chr3_3:1609598-1609617 None:intergenic 20.0%
!!! TTTTGTCTTTTTTACAGAAT+CGG + chr3_3:1609822-1609841 Msa0437690:intron 20.0%
!! TTCTTCTTATGATAAATTTC+AGG + chr3_3:1611153-1611172 Msa0437690:CDS 20.0%
!! TAGTTTATAAAACTTAGCTA+TGG + chr3_3:1612014-1612033 Msa0437690:intron 20.0%
!!! AATTAACAGAAGTTGTTTTT+TGG + chr3_3:1612174-1612193 Msa0437690:intron 20.0%
!! GTTATAAATCAAAGAACAAA+AGG - chr3_3:1612478-1612497 None:intergenic 20.0%
!! TCATTATTCAAAGCATAAAA+AGG - chr3_3:1613024-1613043 None:intergenic 20.0%
!!! TTTCTATGTTTTTATAACCT+TGG + chr3_3:1613112-1613131 Msa0437690:intron 20.0%
!!! TTCTATGTTTTTATAACCTT+GGG + chr3_3:1613113-1613132 Msa0437690:intron 20.0%
!! ACATATAAATACGTAGAAAT+AGG + chr3_3:1613371-1613390 Msa0437690:intron 20.0%
!!! AATGTCAAATTATAGTTTTC+AGG - chr3_3:1613977-1613996 None:intergenic 20.0%
!! TGAAAACTATAATTTGACAT+TGG + chr3_3:1613976-1613995 Msa0437690:intron 20.0%
!!! ATATATTTTTATTTGCTCTC+TGG + chr3_3:1614000-1614019 Msa0437690:intron 20.0%
!! GAATCAAAACTATTTCATAT+TGG - chr3_3:1614480-1614499 None:intergenic 20.0%
!! TATTAATTGACATCAGTTAA+AGG - chr3_3:1614647-1614666 None:intergenic 20.0%
!!! ATAAAAAGTGAACTTGTTAA+CGG - chr3_3:1615385-1615404 None:intergenic 20.0%
!!! TTCTTTTTATGGGTTATATT+TGG + chr3_3:1615454-1615473 Msa0437690:intron 20.0%
!!! TTTACTATTCCTCTAAAAAA+AGG + chr3_3:1615499-1615518 Msa0437690:intron 20.0%
!!! AGTAAATATCCTTTTTTTAG+AGG - chr3_3:1615511-1615530 None:intergenic 20.0%
!! TTGTCAAAATTACACAAAAA+TGG - chr3_3:1615745-1615764 None:intergenic 20.0%
!!! TTTGTGTAATTTTGACAAAT+AGG + chr3_3:1615747-1615766 Msa0437690:intron 20.0%
!! CATAATAAGCATTTATTTAG+GGG - chr3_3:1615970-1615989 None:intergenic 20.0%
!! TAACACTTATGTTAATTTAG+GGG + chr3_3:1616398-1616417 Msa0437690:intron 20.0%
!! TACATTTGCCATTAAAAAAA+GGG - chr3_3:1616485-1616504 None:intergenic 20.0%
!! TTACATTTGCCATTAAAAAA+AGG - chr3_3:1616486-1616505 None:intergenic 20.0%
!! TTTATTGAGATTAGTAGTAA+AGG - chr3_3:1617254-1617273 None:intergenic 20.0%
!! TTTATAAAGGTAATTCCTTT+GGG - chr3_3:1617343-1617362 None:intergenic 20.0%
!! ATTTATAAAGGTAATTCCTT+TGG - chr3_3:1617344-1617363 None:intergenic 20.0%
!! TTCATAATATTTCTCAGTAA+TGG + chr3_3:1617482-1617501 Msa0437690:intron 20.0%
!! ATAAATGAAGTAAAAGAAAG+GGG - chr3_3:1617570-1617589 None:intergenic 20.0%
!! TTATTTGACTATATCTCAAA+TGG + chr3_3:1617586-1617605 Msa0437690:intron 20.0%
!! AAAACAAACCCTAATTAATT+AGG + chr3_3:1618503-1618522 Msa0437690:intron 20.0%
!! AAACAAACCCTAATTAATTA+GGG + chr3_3:1618504-1618523 Msa0437690:intron 20.0%
!! CTGATTTATTGAAAATTCTT+TGG + chr3_3:1619496-1619515 Msa0437690:intron 20.0%
!! ACAACATTAGATACAAAAAT+TGG - chr3_3:1619852-1619871 None:intergenic 20.0%
!! AGCTATATCTATCAAAATAT+GGG - chr3_3:1620527-1620546 None:intergenic 20.0%
!! TAGCTATATCTATCAAAATA+TGG - chr3_3:1620528-1620547 None:intergenic 20.0%
!!! TTTTGATAGATATAGCTAAT+AGG + chr3_3:1620530-1620549 Msa0437690:intron 20.0%
!!! TGTTAATGATTTTTTAGCAA+AGG + chr3_3:1620674-1620693 Msa0437690:CDS 20.0%
!! TGTAAAAGGAAAATAGAAAA+TGG + chr3_3:1620843-1620862 Msa0437690:three_prime_UTR 20.0%
!!! TGATAATCATTTGTTTTTTG+GGG + chr3_3:1620882-1620901 Msa0437690:three_prime_UTR 20.0%
!!! ATAGTTTTTTCGTACTTCAA+AGG + chr3_3:1608829-1608848 Msa0437690:five_prime_UTR 25.0%
!!! GTTTTTTTCGACGAATTATT+AGG + chr3_3:1608872-1608891 Msa0437690:five_prime_UTR 25.0%
! ATTCTTAAATCTGCAAACAA+CGG + chr3_3:1609012-1609031 Msa0437690:five_prime_UTR 25.0%
!!! GTTTTTCTCTGATTGATTTA+TGG + chr3_3:1609160-1609179 Msa0437690:intron 25.0%
! AATACACTTGAAAAACGTTA+TGG + chr3_3:1609378-1609397 Msa0437690:intron 25.0%
! ATCTAATCAATATACACTGA+CGG + chr3_3:1609430-1609449 Msa0437690:intron 25.0%
!!! TTTTAGGAACTAAACTAGAA+AGG - chr3_3:1609516-1609535 None:intergenic 25.0%
! TTCGATTAAATTTCATAACG+CGG + chr3_3:1609680-1609699 Msa0437690:intron 25.0%
! TAAAGCTATTGTTTCAATAG+TGG + chr3_3:1609730-1609749 Msa0437690:intron 25.0%
! AAAGCTATTGTTTCAATAGT+GGG + chr3_3:1609731-1609750 Msa0437690:intron 25.0%
! ACAATCATATCCACAATATT+GGG + chr3_3:1610647-1610666 Msa0437690:CDS 25.0%
! AAATCAACAGTTGAATAGTT+TGG + chr3_3:1610736-1610755 Msa0437690:intron 25.0%
! AAATCATAACCAAAGCAATT+TGG - chr3_3:1610796-1610815 None:intergenic 25.0%
!!! AACTTCATGTTTGTTTCTTT+TGG + chr3_3:1610983-1611002 Msa0437690:intron 25.0%
!! ATGAATTTGAGAACTAGTTT+GGG - chr3_3:1611065-1611084 None:intergenic 25.0%
!! TCTGATACAAATTTTCGTAA+CGG + chr3_3:1611712-1611731 Msa0437690:intron 25.0%
!!! AATGCATAGTTTAGTTTTGT+TGG - chr3_3:1611901-1611920 None:intergenic 25.0%
! ACAAAACTAAACTATGCATT+CGG + chr3_3:1611901-1611920 Msa0437690:intron 25.0%
!!! ATAGCTATTAGTCTTTTTAG+GGG - chr3_3:1611938-1611957 None:intergenic 25.0%
!!! CATAGCTATTAGTCTTTTTA+GGG - chr3_3:1611939-1611958 None:intergenic 25.0%
! AGCTATGGCTAAAATAATAT+AGG + chr3_3:1612029-1612048 Msa0437690:intron 25.0%
! ACTTCTGTTAATTCAAAAGT+AGG - chr3_3:1612167-1612186 None:intergenic 25.0%
! GGAATACATCATAATGAATA+AGG - chr3_3:1612360-1612379 None:intergenic 25.0%
! TTACAGTTTGAATCTTGATT+TGG + chr3_3:1612594-1612613 Msa0437690:intron 25.0%
! TTGTAAGATACATAAACTAC+CGG - chr3_3:1612681-1612700 None:intergenic 25.0%
! TTGTAAAGATGATAAGCAAA+TGG + chr3_3:1612874-1612893 Msa0437690:CDS 25.0%
! TGCAACTTATACAATTACAA+CGG - chr3_3:1613263-1613282 None:intergenic 25.0%
! TTAAGAATCAGACACATAAA+GGG - chr3_3:1613607-1613626 None:intergenic 25.0%
! ATTAAGAATCAGACACATAA+AGG - chr3_3:1613608-1613627 None:intergenic 25.0%
! ATAAGATTATGCAAATAACC+TGG - chr3_3:1614150-1614169 None:intergenic 25.0%
! ATTGATCAAATCTTGAAGAT+CGG - chr3_3:1614378-1614397 None:intergenic 25.0%
!!! TAGTTTTGATTCAATTCAGA+CGG + chr3_3:1614488-1614507 Msa0437690:intron 25.0%
! TATCTCTGTAATAGAAACAA+AGG - chr3_3:1614528-1614547 None:intergenic 25.0%
!! TTTTACATACCATACTCTTT+GGG - chr3_3:1614565-1614584 None:intergenic 25.0%
!! ATTTTACATACCATACTCTT+TGG - chr3_3:1614566-1614585 None:intergenic 25.0%
! ATGGTATGTAAAATCTATAG+TGG + chr3_3:1614572-1614591 Msa0437690:intron 25.0%
!! ATTTAGCTTAAATGGTAGAA+GGG - chr3_3:1614779-1614798 None:intergenic 25.0%
! TAGGTAGTCATAAAATAGTT+GGG - chr3_3:1614819-1614838 None:intergenic 25.0%
! TTCATACTAATCTTATACCA+TGG + chr3_3:1614946-1614965 Msa0437690:intron 25.0%
! ATACTGTAAAATACAGTAGT+TGG + chr3_3:1615182-1615201 Msa0437690:CDS 25.0%
! TACTGTAAAATACAGTAGTT+GGG + chr3_3:1615183-1615202 Msa0437690:CDS 25.0%
! ATACTGTAAAATACAGTAGT+TGG + chr3_3:1615182-1615201 Msa0437690:CDS 25.0%
! TACTGTAAAATACAGTAGTT+GGG + chr3_3:1615183-1615202 Msa0437690:CDS 25.0%
!!! TTATTTTTCCCCTCAATATT+TGG + chr3_3:1615401-1615420 Msa0437690:intron 25.0%
!!! TCATGCTGTTTTCTTTTTAT+GGG + chr3_3:1615444-1615463 Msa0437690:intron 25.0%
!! GCATATCATTTTACCAAAAT+GGG - chr3_3:1615565-1615584 None:intergenic 25.0%
!! TGCATATCATTTTACCAAAA+TGG - chr3_3:1615566-1615585 None:intergenic 25.0%
!! TATACAAGATGGATTTAAGA+AGG - chr3_3:1615789-1615808 None:intergenic 25.0%
! AAACTGCTAAATATACAAGA+TGG - chr3_3:1615800-1615819 None:intergenic 25.0%
!! TTGTATATTTAGCAGTTTTG+TGG + chr3_3:1615802-1615821 Msa0437690:intron 25.0%
! GCATAATAATTGTTCTATGT+TGG + chr3_3:1616032-1616051 Msa0437690:intron 25.0%
!! ATCATTAATTATAGTGGAAG+TGG + chr3_3:1616436-1616455 Msa0437690:intron 25.0%
! ACATTTGCCATTAAAAAAAG+GGG - chr3_3:1616484-1616503 None:intergenic 25.0%
!! TATATTTGAGACCCTTAATA+TGG + chr3_3:1616508-1616527 Msa0437690:intron 25.0%
! GTTTAATTCACCTAAATGAA+TGG + chr3_3:1616663-1616682 Msa0437690:intron 25.0%
! ACTCTTAAAAGGAGATATTA+CGG - chr3_3:1617189-1617208 None:intergenic 25.0%
!!! TCTCCTTTTAAGAGTTTAAA+TGG + chr3_3:1617194-1617213 Msa0437690:intron 25.0%
! ATAAAATGTTGTGAACTTAC+AGG + chr3_3:1617269-1617288 Msa0437690:intron 25.0%
!!! TCTTGAAAAAGCACTATTAA+TGG + chr3_3:1617308-1617327 Msa0437690:CDS 25.0%
! TTAACTGGTCACATTTATAA+AGG - chr3_3:1617356-1617375 None:intergenic 25.0%
! ACTTTAATAGCTCTTCTATA+TGG - chr3_3:1617535-1617554 None:intergenic 25.0%
! ACTATATCTCAAATGGAAAT+TGG + chr3_3:1617593-1617612 Msa0437690:intron 25.0%
!!! AAATGGAAATTGGTTTTTGA+CGG + chr3_3:1617603-1617622 Msa0437690:intron 25.0%
!!! CATCTTTTGATTACATGAAT+CGG + chr3_3:1617635-1617654 Msa0437690:intron 25.0%
!!! TAGCTTTGATTACTTTTTAC+TGG + chr3_3:1617823-1617842 Msa0437690:intron 25.0%
! TCTTGAAGTCTATTGAATAA+TGG + chr3_3:1617937-1617956 Msa0437690:intron 25.0%
! CTTGAAGTCTATTGAATAAT+GGG + chr3_3:1617938-1617957 Msa0437690:intron 25.0%
! TTGAAGTCTATTGAATAATG+GGG + chr3_3:1617939-1617958 Msa0437690:intron 25.0%
!!! TGCAATTTTGTATTTCAAGT+AGG - chr3_3:1618082-1618101 None:intergenic 25.0%
! ATTGAATATAAATAAGGGAG+AGG + chr3_3:1618305-1618324 Msa0437690:intron 25.0%
!!! CAACTAGGTTTTAAGTTTTA+GGG - chr3_3:1618575-1618594 None:intergenic 25.0%
! CTGAAAATCCATTGTAAAAT+TGG - chr3_3:1618764-1618783 None:intergenic 25.0%
!!! TTTACAATGGATTTTCAGTA+TGG + chr3_3:1618766-1618785 Msa0437690:intron 25.0%
! TCAAATCATTAACAAGATCT+AGG + chr3_3:1618878-1618897 Msa0437690:intron 25.0%
! AATACGTAAGCATTTAAACA+CGG - chr3_3:1619145-1619164 None:intergenic 25.0%
! TATTATTAGTAGAAAACTGG+TGG + chr3_3:1619573-1619592 Msa0437690:intron 25.0%
!! AACGTAACTAAGTCTTTTAA+TGG + chr3_3:1619739-1619758 Msa0437690:intron 25.0%
! GACGATTAATACATTAACTT+AGG - chr3_3:1619785-1619804 None:intergenic 25.0%
! CATAATAACTGATAGTACAA+AGG - chr3_3:1619818-1619837 None:intergenic 25.0%
! TGTACTATCAGTTATTATGT+TGG + chr3_3:1619819-1619838 Msa0437690:intron 25.0%
! ACATTAGATACAAAAATTGG+AGG - chr3_3:1619849-1619868 None:intergenic 25.0%
! TATCTAATGTTGTCTATGAT+AGG + chr3_3:1619859-1619878 Msa0437690:intron 25.0%
! TTTATCAATACTAACCCATA+AGG - chr3_3:1620010-1620029 None:intergenic 25.0%
! ATTGTTATCAGCAATTATAC+TGG - chr3_3:1620286-1620305 None:intergenic 25.0%
! AGTATAATTGCTGATAACAA+TGG + chr3_3:1620285-1620304 Msa0437690:CDS 25.0%
!! TTCATTGAATGCTGAATTTT+TGG + chr3_3:1620371-1620390 Msa0437690:intron 25.0%
! CTAAAAAATCATTAACAGCA+AGG - chr3_3:1620671-1620690 None:intergenic 25.0%
! ATTGTAGTCAGAATAGAAAA+AGG + chr3_3:1620750-1620769 Msa0437690:three_prime_UTR 25.0%
TATGCAGTAAAACGTTGAAA+GGG - chr3_3:1608663-1608682 None:intergenic 30.0%
TTATGCAGTAAAACGTTGAA+AGG - chr3_3:1608664-1608683 None:intergenic 30.0%
AAGAAGAAGAAGAAAAACAC+GGG - chr3_3:1608760-1608779 None:intergenic 30.0%
GAAGAAGAAGAAGAAAAACA+CGG - chr3_3:1608761-1608780 None:intergenic 30.0%
GAGAAGCAGAAAAATCTTAT+TGG - chr3_3:1608794-1608813 None:intergenic 30.0%
AATTCGTCGAAAAAAACGAA+TGG - chr3_3:1608869-1608888 None:intergenic 30.0%
!! TCATTTTTCGAAGGTAACAT+TGG + chr3_3:1609070-1609089 Msa0437690:intron 30.0%
CTTGTGAATTGACAAAATAG+TGG + chr3_3:1609258-1609277 Msa0437690:intron 30.0%
TCACACCGTAAATATCTATT+TGG + chr3_3:1609590-1609609 Msa0437690:intron 30.0%
GATTACTTTCTATGCAATGA+CGG - chr3_3:1609652-1609671 None:intergenic 30.0%
AAAAGACAAAAATGCGATGT+CGG - chr3_3:1609813-1609832 None:intergenic 30.0%
TGCTGGTAATTCATCAAATT+TGG + chr3_3:1610035-1610054 Msa0437690:CDS 30.0%
GCTGGTAATTCATCAAATTT+GGG + chr3_3:1610036-1610055 Msa0437690:CDS 30.0%
GCAAATTCTTCTAATCCATA+TGG + chr3_3:1610102-1610121 Msa0437690:CDS 30.0%
TCTTCTAATCCATATGGTTA+TGG + chr3_3:1610108-1610127 Msa0437690:CDS 30.0%
ATAAGTGCTTGAATAACTTG+CGG - chr3_3:1610280-1610299 None:intergenic 30.0%
CAATATTGTGGATATGATTG+TGG - chr3_3:1610648-1610667 None:intergenic 30.0%
CACAATCATATCCACAATAT+TGG + chr3_3:1610646-1610665 Msa0437690:CDS 30.0%
AGTGATATTCAAACCTGTAA+AGG - chr3_3:1610702-1610721 None:intergenic 30.0%
TGAATATCACTGACAAAGTT+TGG + chr3_3:1610711-1610730 Msa0437690:intron 30.0%
AGCAATTTGGCATGAATAAA+TGG - chr3_3:1610783-1610802 None:intergenic 30.0%
TTATTCATGCCAAATTGCTT+TGG + chr3_3:1610784-1610803 Msa0437690:intron 30.0%
TCTAATCATTGATGCTTCAA+TGG + chr3_3:1610896-1610915 Msa0437690:intron 30.0%
!! TTCATGTTTGTTTCTTTTGG+TGG + chr3_3:1610986-1611005 Msa0437690:intron 30.0%
GATGAATTTGAGAACTAGTT+TGG - chr3_3:1611066-1611085 None:intergenic 30.0%
!! TTGGTTGAATAGGATTAGTT+TGG - chr3_3:1611108-1611127 None:intergenic 30.0%
! CTTTGATAGTTTGGTTGAAT+AGG - chr3_3:1611118-1611137 None:intergenic 30.0%
ACCAAACTATCAAAGTCATT+TGG + chr3_3:1611123-1611142 Msa0437690:CDS 30.0%
! TCCAAATGACTTTGATAGTT+TGG - chr3_3:1611127-1611146 None:intergenic 30.0%
AATGAAACAGCAATATAAGC+AGG - chr3_3:1611412-1611431 None:intergenic 30.0%
TTAGATGATAGTTTCTCAGT+TGG - chr3_3:1611442-1611461 None:intergenic 30.0%
TGCTGCTAATTCAATACTTA+AGG + chr3_3:1611465-1611484 Msa0437690:CDS 30.0%
ACGAAAATTTGTATCAGAGA+TGG - chr3_3:1611710-1611729 None:intergenic 30.0%
ACGGAAATGAAAGCAAAATA+TGG + chr3_3:1611731-1611750 Msa0437690:intron 30.0%
AGTGAAAATAGGAATAAGAC+CGG + chr3_3:1611773-1611792 Msa0437690:intron 30.0%
! CGATTCAAGAAAAGATTTTC+CGG - chr3_3:1611795-1611814 None:intergenic 30.0%
!!! TAGCTATTAGTCTTTTTAGG+GGG - chr3_3:1611937-1611956 None:intergenic 30.0%
!!! GCATAGCTATTAGTCTTTTT+AGG - chr3_3:1611940-1611959 None:intergenic 30.0%
TAAACAAGGCAATATTTAGC+AGG - chr3_3:1611970-1611989 None:intergenic 30.0%
!! TTTGGAACTTTTGTATGTAG+AGG + chr3_3:1612103-1612122 Msa0437690:intron 30.0%
ATATTGCAACCAAATTGTGA+TGG + chr3_3:1612232-1612251 Msa0437690:intron 30.0%
TGCATAAAACCATCACAATT+TGG - chr3_3:1612244-1612263 None:intergenic 30.0%
!!! AATTGTGATGGTTTTATGCA+TGG + chr3_3:1612244-1612263 Msa0437690:intron 30.0%
! CATAACGGTTCATATTGATT+GGG - chr3_3:1612319-1612338 None:intergenic 30.0%
TAAGGTTTCATACCCAAAAT+AGG - chr3_3:1612342-1612361 None:intergenic 30.0%
AAGAACAAAAGGAAAGTGAT+TGG - chr3_3:1612467-1612486 None:intergenic 30.0%
TGTAAGATACATAAACTACC+GGG - chr3_3:1612680-1612699 None:intergenic 30.0%
TCTAGCAAAATCATGAAGAA+CGG - chr3_3:1612991-1613010 None:intergenic 30.0%
AATAATGACCAACGATACTT+TGG + chr3_3:1613036-1613055 Msa0437690:intron 30.0%
! TAGAGTTTAGAGTTTCACAA+GGG - chr3_3:1613184-1613203 None:intergenic 30.0%
! ATAGAGTTTAGAGTTTCACA+AGG - chr3_3:1613185-1613204 None:intergenic 30.0%
AATTACAGAGCATGATTTAG+TGG + chr3_3:1613209-1613228 Msa0437690:intron 30.0%
!! TGAAAGCATCATCAAGAAAA+AGG + chr3_3:1613303-1613322 Msa0437690:intron 30.0%
!! GAAAGCATCATCAAGAAAAA+GGG + chr3_3:1613304-1613323 Msa0437690:intron 30.0%
! GGACTTCTATATTTTATGAC+TGG - chr3_3:1613457-1613476 None:intergenic 30.0%
ATTGAAACAAAGCCAAGATT+TGG + chr3_3:1613692-1613711 Msa0437690:intron 30.0%
TATGAGTACCAGTTTCATAA+AGG - chr3_3:1613749-1613768 None:intergenic 30.0%
ACACTAATGCAGATGATTAA+TGG - chr3_3:1613869-1613888 None:intergenic 30.0%
ACACTACTGAAATTCATTCT+AGG + chr3_3:1613908-1613927 Msa0437690:intron 30.0%
ATAGTTATGTGTATGTTTGC+TGG - chr3_3:1613940-1613959 None:intergenic 30.0%
AAATTAGGTAGAACTTATCC+TGG - chr3_3:1614037-1614056 None:intergenic 30.0%
! ATTTATTCTTTTGCACTGTC+TGG + chr3_3:1614076-1614095 Msa0437690:intron 30.0%
! TTTATTAGTCTGTGAACTTC+AGG + chr3_3:1614337-1614356 Msa0437690:intron 30.0%
! TTATTAGTCTGTGAACTTCA+GGG + chr3_3:1614338-1614357 Msa0437690:intron 30.0%
TATACTCCAGTAAAAGAACA+GGG - chr3_3:1614415-1614434 None:intergenic 30.0%
ATATACTCCAGTAAAAGAAC+AGG - chr3_3:1614416-1614435 None:intergenic 30.0%
! AATATTTTCCCCAAAGAGTA+TGG + chr3_3:1614553-1614572 Msa0437690:intron 30.0%
TTTACATACCATACTCTTTG+GGG - chr3_3:1614564-1614583 None:intergenic 30.0%
AATTGACATCAGTTAAAGGA+AGG - chr3_3:1614643-1614662 None:intergenic 30.0%
GTTGTAAAAGGAGAAATCAA+TGG - chr3_3:1614694-1614713 None:intergenic 30.0%
! GATTTAGCTTAAATGGTAGA+AGG - chr3_3:1614780-1614799 None:intergenic 30.0%
TAAAATAGTTGGGTGATTAG+AGG - chr3_3:1614809-1614828 None:intergenic 30.0%
CTAGGTAGTCATAAAATAGT+TGG - chr3_3:1614820-1614839 None:intergenic 30.0%
AGTTACAGTATTAGTTAGGT+AGG - chr3_3:1614844-1614863 None:intergenic 30.0%
GTGTAGTTACAGTATTAGTT+AGG - chr3_3:1614848-1614867 None:intergenic 30.0%
AGAAATGAAATGAGTGATAC+AGG - chr3_3:1614924-1614943 None:intergenic 30.0%
AATTAGCAAGATAACATCCA+TGG - chr3_3:1614966-1614985 None:intergenic 30.0%
! ACCTTTCTATCCTTTTCATT+AGG - chr3_3:1615274-1615293 None:intergenic 30.0%
AGATTCAATAGAAGGTGAAA+AGG - chr3_3:1615345-1615364 None:intergenic 30.0%
TTTCACCTTCTATTGAATCT+TGG + chr3_3:1615345-1615364 Msa0437690:intron 30.0%
ACCAACAATCCAAATATTGA+GGG - chr3_3:1615413-1615432 None:intergenic 30.0%
AACCAACAATCCAAATATTG+AGG - chr3_3:1615414-1615433 None:intergenic 30.0%
!!! CTCATGCTGTTTTCTTTTTA+TGG + chr3_3:1615443-1615462 Msa0437690:intron 30.0%
TTGGATGCATGTTATAATCA+AGG + chr3_3:1615473-1615492 Msa0437690:intron 30.0%
GGATATTTACTATTGTGAAC+TGG + chr3_3:1615520-1615539 Msa0437690:intron 30.0%
!! GTGTAATTTTGACAAATAGG+AGG + chr3_3:1615750-1615769 Msa0437690:intron 30.0%
AAAAAAAAGGCAGGTATTAG+CGG - chr3_3:1615844-1615863 None:intergenic 30.0%
! GAAAGCATAAAAAAAAAGGC+AGG - chr3_3:1615853-1615872 None:intergenic 30.0%
ATAAGCATTTATTTAGGGGT+GGG - chr3_3:1615966-1615985 None:intergenic 30.0%
AATAAGCATTTATTTAGGGG+TGG - chr3_3:1615967-1615986 None:intergenic 30.0%
ACACAAAATAAATCCATCTG+AGG - chr3_3:1616092-1616111 None:intergenic 30.0%
AGATCAAGATTAATGGTACA+TGG - chr3_3:1616216-1616235 None:intergenic 30.0%
TGTACCATTAATCTTGATCT+TGG + chr3_3:1616216-1616235 Msa0437690:intron 30.0%
TTGTCCAAGATCAAGATTAA+TGG - chr3_3:1616223-1616242 None:intergenic 30.0%
TTCAATGACTCTTATTCTCA+TGG - chr3_3:1616290-1616309 None:intergenic 30.0%
GTTAATTTAGGGGTTTCTTA+AGG + chr3_3:1616408-1616427 Msa0437690:intron 30.0%
!!! TTTGAGACCCCTTTTTTTAA+TGG + chr3_3:1616474-1616493 Msa0437690:intron 30.0%
TAATCCTCTTTATGTCATTG+AGG + chr3_3:1616576-1616595 Msa0437690:intron 30.0%
!! CTCGATATTCTCTGAAATAA+TGG - chr3_3:1616753-1616772 None:intergenic 30.0%
GAACAGAAAATAATCACTCA+AGG + chr3_3:1616976-1616995 Msa0437690:CDS 30.0%
! CTTAGCAAAAGCTTTGATAA+TGG + chr3_3:1617053-1617072 Msa0437690:CDS 30.0%
ACGCCATTTAAACTCTTAAA+AGG - chr3_3:1617200-1617219 None:intergenic 30.0%
TAATGGTTCAAAATTCCCAA+AGG + chr3_3:1617325-1617344 Msa0437690:CDS 30.0%
ATATGGATGGGGAAATTTAA+AGG - chr3_3:1617518-1617537 None:intergenic 30.0%
AATAGCTCTTCTATATGGAT+GGG - chr3_3:1617530-1617549 None:intergenic 30.0%
TAATAGCTCTTCTATATGGA+TGG - chr3_3:1617531-1617550 None:intergenic 30.0%
TATCAAGAGTTAGCAAGTTA+AGG - chr3_3:1617730-1617749 None:intergenic 30.0%
AAGCTAACCTGATTATATTC+AGG - chr3_3:1617809-1617828 None:intergenic 30.0%
GGTGTCAAGTTTGTAATTTA+AGG + chr3_3:1618025-1618044 Msa0437690:intron 30.0%
GTAATTTAAGGATCACAACA+CGG + chr3_3:1618037-1618056 Msa0437690:intron 30.0%
!! TATTATCTAATTTGCTCGAG+AGG - chr3_3:1618284-1618303 None:intergenic 30.0%
!!! AAGTTTTAGGGTCAGATAAA+GGG - chr3_3:1618563-1618582 None:intergenic 30.0%
!!! TAAGTTTTAGGGTCAGATAA+AGG - chr3_3:1618564-1618583 None:intergenic 30.0%
!!! GCAACTAGGTTTTAAGTTTT+AGG - chr3_3:1618576-1618595 None:intergenic 30.0%
AAAAGATATGTGGGATTGTA+AGG - chr3_3:1618635-1618654 None:intergenic 30.0%
! ATCAAGAGCCAATTTTACAA+TGG + chr3_3:1618753-1618772 Msa0437690:intron 30.0%
ACTTATTAAGTTATCTGTGC+TGG + chr3_3:1618810-1618829 Msa0437690:intron 30.0%
!!! TGCCAATTTGTTTTGGAAAT+GGG + chr3_3:1618901-1618920 Msa0437690:intron 30.0%
ATCCCATTTCCAAAACAAAT+TGG - chr3_3:1618906-1618925 None:intergenic 30.0%
!!! ATTTGTTTTGGAAATGGGAT+CGG + chr3_3:1618906-1618925 Msa0437690:intron 30.0%
ATACGTAAGCATTTAAACAC+GGG - chr3_3:1619144-1619163 None:intergenic 30.0%
!!! GGTTTTTGAGATTTTCTTGT+TGG + chr3_3:1619246-1619265 Msa0437690:intron 30.0%
ACATGTAGCTATATATCTTG+AGG + chr3_3:1620037-1620056 Msa0437690:intron 30.0%
CATGTAGCTATATATCTTGA+GGG + chr3_3:1620038-1620057 Msa0437690:intron 30.0%
ATGTAGCTATATATCTTGAG+GGG + chr3_3:1620039-1620058 Msa0437690:intron 30.0%
!! TAACAAACGTTCATTTTTGC+AGG + chr3_3:1620584-1620603 Msa0437690:intron 30.0%
AAAATCATTAACAGCAAGGT+TGG - chr3_3:1620667-1620686 None:intergenic 30.0%
! TGCAACATTTTTCGCTATAA+AGG - chr3_3:1620702-1620721 None:intergenic 30.0%
CAAACCTACAGATACATTAA+GGG - chr3_3:1620726-1620745 None:intergenic 30.0%
ACAAACCTACAGATACATTA+AGG - chr3_3:1620727-1620746 None:intergenic 30.0%
TGATTATCAAAGGTCATACA+CGG - chr3_3:1620871-1620890 None:intergenic 30.0%
TTACCATTCTTTCTTGGTAA+AGG + chr3_3:1620908-1620927 Msa0437690:three_prime_UTR 30.0%
TCGTAATTTGAGAAGAAGGT+GGG - chr3_3:1608585-1608604 None:intergenic 35.0%
CAGAGAGAAATATAGTGCTT+GGG - chr3_3:1608608-1608627 None:intergenic 35.0%
ACAGAGAGAAATATAGTGCT+TGG - chr3_3:1608609-1608628 None:intergenic 35.0%
ATGCAGTAAAACGTTGAAAG+GGG - chr3_3:1608662-1608681 None:intergenic 35.0%
ACAGAAGGGAAGAAAAAGAA+CGG - chr3_3:1608694-1608713 None:intergenic 35.0%
TTAGGGTTCGTTGTAGATTA+GGG - chr3_3:1608965-1608984 None:intergenic 35.0%
ATTAGGGTTCGTTGTAGATT+AGG - chr3_3:1608966-1608985 None:intergenic 35.0%
GTCGATTGAAGAAGGAATTA+GGG - chr3_3:1608982-1609001 None:intergenic 35.0%
! TGTCGATTGAAGAAGGAATT+AGG - chr3_3:1608983-1609002 None:intergenic 35.0%
! CAGAAATTGTCGATTGAAGA+AGG - chr3_3:1608990-1609009 None:intergenic 35.0%
!! GCTACGTATTCATTTTTCGA+AGG + chr3_3:1609061-1609080 Msa0437690:five_prime_UTR 35.0%
ATGCTACAAACAAGTGAGTT+TGG - chr3_3:1609122-1609141 None:intergenic 35.0%
TAGGAACTAAACTAGAAAGG+TGG - chr3_3:1609513-1609532 None:intergenic 35.0%
GCAATAAAGATGTCTGATGT+CGG - chr3_3:1609862-1609881 None:intergenic 35.0%
TTTATTGCAACCATGACATC+TGG + chr3_3:1609874-1609893 Msa0437690:exon 35.0%
AGAATAAATTCCATTCGCTG+TGG - chr3_3:1609932-1609951 None:intergenic 35.0%
GCGTATGCATTATAATCTTG+TGG - chr3_3:1610075-1610094 None:intergenic 35.0%
!!! GTATTTTGATATGCTCCTAC+AGG - chr3_3:1610201-1610220 None:intergenic 35.0%
! GTAGGAGCATATCAAAATAC+AGG + chr3_3:1610201-1610220 Msa0437690:CDS 35.0%
! GTATTCTGAAAGGAGGAAAT+AGG - chr3_3:1610240-1610259 None:intergenic 35.0%
ATTTCCTCCTTTCAGAATAC+TGG + chr3_3:1610240-1610259 Msa0437690:CDS 35.0%
TTTCCTCCTTTCAGAATACT+GGG + chr3_3:1610241-1610260 Msa0437690:CDS 35.0%
ATTAGACCCAGTATTCTGAA+AGG - chr3_3:1610250-1610269 None:intergenic 35.0%
ATCAGCCACAATACAATCAA+TGG + chr3_3:1610478-1610497 Msa0437690:CDS 35.0%
TCAGCCACAATACAATCAAT+GGG + chr3_3:1610479-1610498 Msa0437690:CDS 35.0%
AACCCAAAGTAGATGAACTT+GGG - chr3_3:1610563-1610582 None:intergenic 35.0%
TATTGTGGATATGATTGTGG+AGG - chr3_3:1610645-1610664 None:intergenic 35.0%
GATATTCAAACCTGTAAAGG+CGG - chr3_3:1610699-1610718 None:intergenic 35.0%
CATGATGATTACTGGAAACA+TGG + chr3_3:1611037-1611056 Msa0437690:CDS 35.0%
! AAAGATGGAGCACTTTGTAA+GGG - chr3_3:1611271-1611290 None:intergenic 35.0%
! ACTCGTTTTGTATCCAAAGA+TGG - chr3_3:1611286-1611305 None:intergenic 35.0%
! GTCAAATTTGAAGCAATTCG+AGG - chr3_3:1611334-1611353 None:intergenic 35.0%
TGTTTGAATTTACCGAAGTG+TGG + chr3_3:1611825-1611844 Msa0437690:intron 35.0%
GTTTGAATTTACCGAAGTGT+GGG + chr3_3:1611826-1611845 Msa0437690:intron 35.0%
TTTGAATTTACCGAAGTGTG+GGG + chr3_3:1611827-1611846 Msa0437690:intron 35.0%
GCAATATTTAGCAGGCATAT+TGG - chr3_3:1611962-1611981 None:intergenic 35.0%
!! TTTGGAACTTTTGTATGCAG+AGG + chr3_3:1612059-1612078 Msa0437690:intron 35.0%
! ACGAGACTAGGAACTTATTT+TGG + chr3_3:1612085-1612104 Msa0437690:intron 35.0%
! AACTTTTGTATGTAGAGGTC+TGG + chr3_3:1612108-1612127 Msa0437690:intron 35.0%
CAACATGTTCCATTTCACTA+AGG - chr3_3:1612134-1612153 None:intergenic 35.0%
CTTAGTGAAATGGAACATGT+TGG + chr3_3:1612132-1612151 Msa0437690:intron 35.0%
GTTATCAGCATCTTAGTCAA+CGG + chr3_3:1612266-1612285 Msa0437690:intron 35.0%
GCATAACGGTTCATATTGAT+TGG - chr3_3:1612320-1612339 None:intergenic 35.0%
! ATGAACCGTTATGCCTATTT+TGG + chr3_3:1612326-1612345 Msa0437690:intron 35.0%
! TGAACCGTTATGCCTATTTT+GGG + chr3_3:1612327-1612346 Msa0437690:intron 35.0%
CATACCCAAAATAGGCATAA+CGG - chr3_3:1612334-1612353 None:intergenic 35.0%
TGCACAAAGTTAGCAAAAAG+TGG - chr3_3:1612443-1612462 None:intergenic 35.0%
ACTATTCATTTCTTACAGCC+CGG + chr3_3:1612659-1612678 Msa0437690:intron 35.0%
! GGTGAGTTTCACTTTAAGTT+TGG + chr3_3:1612922-1612941 Msa0437690:intron 35.0%
!! GAAGAATTCCAAAGTATCGT+TGG - chr3_3:1613047-1613066 None:intergenic 35.0%
AGAGGAAAATAAGACAGATG+AGG - chr3_3:1613584-1613603 None:intergenic 35.0%
GTGTAAGTTGCAACAGAAAT+TGG + chr3_3:1613666-1613685 Msa0437690:intron 35.0%
! ACAAAGCCAAGATTTGGTAA+AGG + chr3_3:1613698-1613717 Msa0437690:intron 35.0%
AAGACTCCTTTACCAAATCT+TGG - chr3_3:1613707-1613726 None:intergenic 35.0%
GGTACTCATACAACTATACT+TGG + chr3_3:1613759-1613778 Msa0437690:intron 35.0%
CTCATACAACTATACTTGGT+TGG + chr3_3:1613763-1613782 Msa0437690:intron 35.0%
!!! ATTAGTGTTTTGACAGTGTG+TGG + chr3_3:1613881-1613900 Msa0437690:intron 35.0%
! TTATGTGTATGTTTGCTGGT+TGG - chr3_3:1613936-1613955 None:intergenic 35.0%
! GACAATATTAGTTGCTTTCC+AGG + chr3_3:1614129-1614148 Msa0437690:intron 35.0%
! TATTAGTCTGTGAACTTCAG+GGG + chr3_3:1614339-1614358 Msa0437690:intron 35.0%
ATACTCCAGTAAAAGAACAG+GGG - chr3_3:1614414-1614433 None:intergenic 35.0%
GTACACATGTAAGAAGCTAT+AGG + chr3_3:1614440-1614459 Msa0437690:intron 35.0%
AGCAGTAGCTTAGTTGTAAA+AGG - chr3_3:1614706-1614725 None:intergenic 35.0%
AGTATTAGTTAGGTAGGTCT+AGG - chr3_3:1614838-1614857 None:intergenic 35.0%
ACTTTGGCAATACAGAATCA+TGG - chr3_3:1615072-1615091 None:intergenic 35.0%
!! CTAGGACTTTTTCTAGACTT+TGG - chr3_3:1615088-1615107 None:intergenic 35.0%
TAGACGATCTAAAAGTAGGT+GGG + chr3_3:1615105-1615124 Msa0437690:CDS 35.0%
! GTATCATTACTTGTTGACAC+AGG - chr3_3:1615166-1615185 None:intergenic 35.0%
! GTATCATTACTTGTTGACAC+AGG - chr3_3:1615166-1615185 None:intergenic 35.0%
GCCTAATGAAAAGGATAGAA+AGG + chr3_3:1615270-1615289 Msa0437690:CDS 35.0%
CCAACAATCCAAATATTGAG+GGG - chr3_3:1615412-1615431 None:intergenic 35.0%
ACTATTGTGAACTGGATACT+AGG + chr3_3:1615528-1615547 Msa0437690:intron 35.0%
AAGCAAAGATCATTAGCAGT+AGG - chr3_3:1615701-1615720 None:intergenic 35.0%
!! TATTTAGCAGTTTTGTGGTG+TGG + chr3_3:1615807-1615826 Msa0437690:intron 35.0%
AAAAAAAGGCAGGTATTAGC+GGG - chr3_3:1615843-1615862 None:intergenic 35.0%
TAAGCATTTATTTAGGGGTG+GGG - chr3_3:1615965-1615984 None:intergenic 35.0%
! TTTTGCTCATAATCGAGATC+CGG - chr3_3:1616163-1616182 None:intergenic 35.0%
ATTTAGGGGTTTCTTAAGGA+CGG + chr3_3:1616412-1616431 Msa0437690:intron 35.0%
GACGGCATCATTAATTATAG+TGG + chr3_3:1616430-1616449 Msa0437690:intron 35.0%
TGAACCTCAATGACATAAAG+AGG - chr3_3:1616583-1616602 None:intergenic 35.0%
GTTTCTACTGCTCATGAAAA+TGG + chr3_3:1616816-1616835 Msa0437690:CDS 35.0%
! TGCATCTAGTGATAGTGATA+AGG + chr3_3:1616842-1616861 Msa0437690:CDS 35.0%
TGCATATTATTCTGCTGCAA+TGG + chr3_3:1616878-1616897 Msa0437690:CDS 35.0%
! CGTTCTAAGCGATTTGATTT+AGG + chr3_3:1616942-1616961 Msa0437690:CDS 35.0%
AGGAAAAAAAATGCTAGAGC+TGG + chr3_3:1616996-1617015 Msa0437690:CDS 35.0%
TGGAAACTTGTACAACAGAA+GGG + chr3_3:1617016-1617035 Msa0437690:CDS 35.0%
CTTAAAAGGAGATATTACGG+TGG - chr3_3:1617186-1617205 None:intergenic 35.0%
!!! GCTTTTTCAAGAACATCTTC+AGG - chr3_3:1617300-1617319 None:intergenic 35.0%
ACACAACCAATTAACAGTCA+AGG + chr3_3:1617410-1617429 Msa0437690:CDS 35.0%
GTAGTACCTTGACTGTTAAT+TGG - chr3_3:1617419-1617438 None:intergenic 35.0%
ATAGCTCTTCTATATGGATG+GGG - chr3_3:1617529-1617548 None:intergenic 35.0%
AATGAAGTAAAAGAAAGGGG+TGG - chr3_3:1617567-1617586 None:intergenic 35.0%
AGAGTTAGCAAGTTAAGGAA+AGG - chr3_3:1617725-1617744 None:intergenic 35.0%
! AACTCTTGATACGTTGTTTC+AGG + chr3_3:1617739-1617758 Msa0437690:intron 35.0%
TAACCTGATTATATTCAGGC+AGG - chr3_3:1617805-1617824 None:intergenic 35.0%
GAAGGAAAAATGATAGCTAC+AGG - chr3_3:1617850-1617869 None:intergenic 35.0%
!!! TCATTTTTCCTTCTGAGATC+AGG + chr3_3:1617857-1617876 Msa0437690:intron 35.0%
!!! CATTTTTCCTTCTGAGATCA+GGG + chr3_3:1617858-1617877 Msa0437690:intron 35.0%
TATAAATCCCTGATCTCAGA+AGG - chr3_3:1617868-1617887 None:intergenic 35.0%
! GCATGCTTTTCAAACTATCA+TGG + chr3_3:1617902-1617921 Msa0437690:intron 35.0%
! ATTGAATAATGGGGCTTCAT+AGG + chr3_3:1617948-1617967 Msa0437690:intron 35.0%
ATTGCAGTTGTGTTTACGAA+CGG + chr3_3:1618475-1618494 Msa0437690:intron 35.0%
CAAGGATGGGAAAAATTGTT+CGG + chr3_3:1618597-1618616 Msa0437690:intron 35.0%
CGGAATGTCAAAAGATATGT+GGG - chr3_3:1618644-1618663 None:intergenic 35.0%
ACGGAATGTCAAAAGATATG+TGG - chr3_3:1618645-1618664 None:intergenic 35.0%
!! TTGGCTCTTGATAATGTTGT+CGG - chr3_3:1618745-1618764 None:intergenic 35.0%
!! ATCTAGGTGCCAATTTGTTT+TGG + chr3_3:1618894-1618913 Msa0437690:intron 35.0%
!!! GTGCCAATTTGTTTTGGAAA+TGG + chr3_3:1618900-1618919 Msa0437690:intron 35.0%
AAAGAGCCTTTAACTGAGAT+TGG - chr3_3:1619009-1619028 None:intergenic 35.0%
TTAAAGGCTCTTTATGCTGA+AGG + chr3_3:1619016-1619035 Msa0437690:CDS 35.0%
TAAAGGCTCTTTATGCTGAA+GGG + chr3_3:1619017-1619036 Msa0437690:CDS 35.0%
TACGTAAGCATTTAAACACG+GGG - chr3_3:1619143-1619162 None:intergenic 35.0%
ATTAATACCGTGATGTTTGC+TGG + chr3_3:1619224-1619243 Msa0437690:intron 35.0%
TTAATACCGTGATGTTTGCT+GGG + chr3_3:1619225-1619244 Msa0437690:intron 35.0%
! AGATTTTCTTGTTGGTCCTT+TGG + chr3_3:1619254-1619273 Msa0437690:intron 35.0%
! GATTTTCTTGTTGGTCCTTT+GGG + chr3_3:1619255-1619274 Msa0437690:intron 35.0%
AGGTATAAGAGTCAACAAAG+TGG - chr3_3:1619374-1619393 None:intergenic 35.0%
ACAATTGACATTATCAGCCT+AGG + chr3_3:1619442-1619461 Msa0437690:intron 35.0%
!! ATTGCAATTTTGTTTGGGCA+AGG + chr3_3:1619607-1619626 Msa0437690:intron 35.0%
GCCATAAATTTGAGCCTTAA+GGG - chr3_3:1619657-1619676 None:intergenic 35.0%
AGCCATAAATTTGAGCCTTA+AGG - chr3_3:1619658-1619677 None:intergenic 35.0%
GCTCAAATTTATGGCTGTTT+GGG + chr3_3:1619662-1619681 Msa0437690:intron 35.0%
TGATAGTACAAAGGTAACGA+CGG - chr3_3:1619809-1619828 None:intergenic 35.0%
! ATAAGGCAGGTGTTTAAGTT+CGG - chr3_3:1619993-1620012 None:intergenic 35.0%
AACTTAAACACCTGCCTTAT+GGG + chr3_3:1619993-1620012 Msa0437690:CDS 35.0%
TGTAGCTATATATCTTGAGG+GGG + chr3_3:1620040-1620059 Msa0437690:intron 35.0%
TGAAGCAAATGATGAGAAAG+AGG + chr3_3:1620215-1620234 Msa0437690:CDS 35.0%
!! CTTTGGAAGAGTGTTTAGAA+TGG + chr3_3:1620244-1620263 Msa0437690:CDS 35.0%
TTAGAATGGTTGAAAGCTCA+TGG + chr3_3:1620258-1620277 Msa0437690:CDS 35.0%
TGATAACAATGGAGACATGA+TGG + chr3_3:1620296-1620315 Msa0437690:CDS 35.0%
! TCTCATACCATTTTCAGAGT+TGG + chr3_3:1620438-1620457 Msa0437690:intron 35.0%
CAGATTTGAGAATAGGTTCT+GGG - chr3_3:1620790-1620809 None:intergenic 35.0%
CAGAACCTATTCTCAAATCT+GGG + chr3_3:1620789-1620808 Msa0437690:three_prime_UTR 35.0%
TGTCCTTTACCAAGAAAGAA+TGG - chr3_3:1620914-1620933 None:intergenic 35.0%
CGTAATTTGAGAAGAAGGTG+GGG - chr3_3:1608584-1608603 None:intergenic 40.0%
GTCGTAATTTGAGAAGAAGG+TGG - chr3_3:1608586-1608605 None:intergenic 40.0%
TGGGTCGTAATTTGAGAAGA+AGG - chr3_3:1608589-1608608 None:intergenic 40.0%
AAAACGTTGAAAGGGGTTGT+TGG - chr3_3:1608655-1608674 None:intergenic 40.0%
TAGATTAGGGTTCTTCGATG+CGG - chr3_3:1608952-1608971 None:intergenic 40.0%
TACGTAGCAGAAATCGTTGA+AGG - chr3_3:1609049-1609068 None:intergenic 40.0%
!!! TCTCTAATTTTGCACCGACT+TGG + chr3_3:1609096-1609115 Msa0437690:intron 40.0%
AAACTAGAAAGGTGGCATCA+AGG - chr3_3:1609505-1609524 None:intergenic 40.0%
CAAAGTGTATCATCAGTTGC+TGG + chr3_3:1610018-1610037 Msa0437690:CDS 40.0%
AAGGAGGAAATAGGCTGATA+AGG - chr3_3:1610231-1610250 None:intergenic 40.0%
TAACTGTCATTGTTCCATGC+CGG - chr3_3:1610369-1610388 None:intergenic 40.0%
! GTAACTTGTATACGGATGAG+AGG - chr3_3:1610403-1610422 None:intergenic 40.0%
! TCTGTGGCGTAACTTGTATA+CGG - chr3_3:1610411-1610430 None:intergenic 40.0%
ATAAGAGCTACTGGAATCTG+TGG - chr3_3:1610427-1610446 None:intergenic 40.0%
TCCAGTAGCTCTTATAGTAC+TGG + chr3_3:1610432-1610451 Msa0437690:CDS 40.0%
ACCAGTACTATAAGAGCTAC+TGG - chr3_3:1610436-1610455 None:intergenic 40.0%
TGTCCCAAGTTCATCTACTT+TGG + chr3_3:1610557-1610576 Msa0437690:CDS 40.0%
GTCCCAAGTTCATCTACTTT+GGG + chr3_3:1610558-1610577 Msa0437690:CDS 40.0%
CAACCCAAAGTAGATGAACT+TGG - chr3_3:1610564-1610583 None:intergenic 40.0%
TGGCACAAGATTGATGCATT+TGG + chr3_3:1610916-1610935 Msa0437690:intron 40.0%
CAGAAGACAGTATCTTCTCA+AGG + chr3_3:1611184-1611203 Msa0437690:CDS 40.0%
! AGGAAGAGGGAAGTACAAAT+TGG - chr3_3:1611212-1611231 None:intergenic 40.0%
! CAAAGATGGAGCACTTTGTA+AGG - chr3_3:1611272-1611291 None:intergenic 40.0%
! CTTACAAAGTGCTCCATCTT+TGG + chr3_3:1611270-1611289 Msa0437690:CDS 40.0%
GAAGCAATTCGAGGATTTGT+TGG - chr3_3:1611325-1611344 None:intergenic 40.0%
! GATGTGGAGCTATCTTTTTC+GGG - chr3_3:1611373-1611392 None:intergenic 40.0%
! GGATGTGGAGCTATCTTTTT+CGG - chr3_3:1611374-1611393 None:intergenic 40.0%
! GTGGGGAGATCTTTTCAAAA+AGG + chr3_3:1611844-1611863 Msa0437690:intron 40.0%
! ACTAAACTATGCATTCGGTG+TGG + chr3_3:1611906-1611925 Msa0437690:intron 40.0%
TTCCTGCTCACTGATAAATC+TGG + chr3_3:1612376-1612395 Msa0437690:intron 40.0%
CAAAGTTAGCAAAAAGTGGC+TGG - chr3_3:1612439-1612458 None:intergenic 40.0%
AACTATTCTTGCTTACAGCC+CGG + chr3_3:1612803-1612822 Msa0437690:intron 40.0%
AAAGACTTGGGAAACATACC+GGG - chr3_3:1612824-1612843 None:intergenic 40.0%
CAAAGACTTGGGAAACATAC+CGG - chr3_3:1612825-1612844 None:intergenic 40.0%
TGGCTATGTTGAAAGAGCTT+TGG + chr3_3:1612847-1612866 Msa0437690:CDS 40.0%
! AGTTTAGAGTTTCACAAGGG+AGG - chr3_3:1613181-1613200 None:intergenic 40.0%
ACTTCTGCGCAGAATAACAA+AGG - chr3_3:1613235-1613254 None:intergenic 40.0%
AATCAGACACATAAAGGGAG+AGG - chr3_3:1613602-1613621 None:intergenic 40.0%
TCATAAAGGCAGAATGGAAG+TGG - chr3_3:1613735-1613754 None:intergenic 40.0%
CCAGTTTCATAAAGGCAGAA+TGG - chr3_3:1613741-1613760 None:intergenic 40.0%
CCATTCTGCCTTTATGAAAC+TGG + chr3_3:1613738-1613757 Msa0437690:intron 40.0%
CACCAAGAACGATTCAAACT+GGG - chr3_3:1613844-1613863 None:intergenic 40.0%
TCCTTTGCAGATGATCACTA+AGG + chr3_3:1614183-1614202 Msa0437690:intron 40.0%
TACCCTATGCACACGTAATT+GGG + chr3_3:1614219-1614238 Msa0437690:CDS 40.0%
ATCCCAATTACGTGTGCATA+GGG - chr3_3:1614224-1614243 None:intergenic 40.0%
TATCCCAATTACGTGTGCAT+AGG - chr3_3:1614225-1614244 None:intergenic 40.0%
ATGCACACGTAATTGGGATA+TGG + chr3_3:1614225-1614244 Msa0437690:CDS 40.0%
AAGAGAGTGACATGTCAACT+CGG - chr3_3:1614319-1614338 None:intergenic 40.0%
TACTCCAGTAAAAGAACAGG+GGG - chr3_3:1614413-1614432 None:intergenic 40.0%
TTGATTCAATTCAGACGGTC+TGG + chr3_3:1614493-1614512 Msa0437690:intron 40.0%
! GAGCAGGGATTTAGCTTAAA+TGG - chr3_3:1614787-1614806 None:intergenic 40.0%
GTCCTAGACGATCTAAAAGT+AGG + chr3_3:1615101-1615120 Msa0437690:CDS 40.0%
!! CACCTACTTTTAGATCGTCT+AGG - chr3_3:1615106-1615125 None:intergenic 40.0%
CTAGACGATCTAAAAGTAGG+TGG + chr3_3:1615104-1615123 Msa0437690:CDS 40.0%
! TACTTGTTGACACAGGATGA+TGG - chr3_3:1615159-1615178 None:intergenic 40.0%
! TACTTGTTGACACAGGATGA+TGG - chr3_3:1615159-1615178 None:intergenic 40.0%
TAGTTGGGTGCCTAATGAAA+AGG + chr3_3:1615261-1615280 Msa0437690:CDS 40.0%
GTGAAAAGGATAACTCTTGC+TGG - chr3_3:1615331-1615350 None:intergenic 40.0%
ACCTTCTATTGAATCTTGGC+TGG + chr3_3:1615349-1615368 Msa0437690:intron 40.0%
TCCAGCCAAGATTCAATAGA+AGG - chr3_3:1615353-1615372 None:intergenic 40.0%
CCCCTCAATATTTGGATTGT+TGG + chr3_3:1615409-1615428 Msa0437690:intron 40.0%
! GGTGCATTATGTTCCCATTT+TGG + chr3_3:1615549-1615568 Msa0437690:intron 40.0%
AAGCATTTATTTAGGGGTGG+GGG - chr3_3:1615964-1615983 None:intergenic 40.0%
!! AATTGTTCTATGTTGGCTCC+TGG + chr3_3:1616039-1616058 Msa0437690:intron 40.0%
!! ATTGTTCTATGTTGGCTCCT+GGG + chr3_3:1616040-1616059 Msa0437690:intron 40.0%
GGATCTTCTTGAAAGGAAGA+CGG - chr3_3:1616071-1616090 None:intergenic 40.0%
CATCTGAGGATCTTCTTGAA+AGG - chr3_3:1616078-1616097 None:intergenic 40.0%
CTTTCAAGAAGATCCTCAGA+TGG + chr3_3:1616076-1616095 Msa0437690:intron 40.0%
!! TTTTCATCTGTGAAGTACCC+CGG + chr3_3:1616141-1616160 Msa0437690:intron 40.0%
TTTGCTCATAATCGAGATCC+GGG - chr3_3:1616162-1616181 None:intergenic 40.0%
AGCACATAACCTCACTTAGT+AGG + chr3_3:1616182-1616201 Msa0437690:intron 40.0%
GCTATCTTTCCTACTAAGTG+AGG - chr3_3:1616194-1616213 None:intergenic 40.0%
TAATACTTATACCCCCTCTG+AGG - chr3_3:1616558-1616577 None:intergenic 40.0%
AGTGGAAAACAAAGAGAGCA+AGG + chr3_3:1616698-1616717 Msa0437690:CDS 40.0%
TGCTTCTTAAATGGCCTTTG+GGG - chr3_3:1616783-1616802 None:intergenic 40.0%
CTGCTTCTTAAATGGCCTTT+GGG - chr3_3:1616784-1616803 None:intergenic 40.0%
! GGCTTTTAATGATACACCAG+AGG + chr3_3:1616899-1616918 Msa0437690:CDS 40.0%
! TCACGTCTTTTCTTTTCCTC+TGG - chr3_3:1616918-1616937 None:intergenic 40.0%
CTGGAAACTTGTACAACAGA+AGG + chr3_3:1617015-1617034 Msa0437690:CDS 40.0%
AAGCTGTTGAGGATATTGAC+TGG + chr3_3:1617084-1617103 Msa0437690:CDS 40.0%
! AGCTGTTGAGGATATTGACT+GGG + chr3_3:1617085-1617104 Msa0437690:CDS 40.0%
TGGGATGCTCTTACTGTAAA+GGG + chr3_3:1617104-1617123 Msa0437690:CDS 40.0%
!! GGTATCGCTTTTCAATTTCC+TGG - chr3_3:1617136-1617155 None:intergenic 40.0%
AAAAGGAGATATTACGGTGG+CGG - chr3_3:1617183-1617202 None:intergenic 40.0%
CTTGGCGAATAGACTTTAAC+TGG - chr3_3:1617371-1617390 None:intergenic 40.0%
TGTGTATTCGTTGCACAGTT+AGG - chr3_3:1617395-1617414 None:intergenic 40.0%
GTTAGCAAGTTAAGGAAAGG+TGG - chr3_3:1617722-1617741 None:intergenic 40.0%
AGGTATATGAAACTCATGCC+CGG + chr3_3:1617759-1617778 Msa0437690:intron 40.0%
CTTGAGATTCTACCTAGAAC+CGG + chr3_3:1618000-1618019 Msa0437690:intron 40.0%
TTGAGATTCTACCTAGAACC+GGG + chr3_3:1618001-1618020 Msa0437690:intron 40.0%
ATTACAAACTTGACACCACC+CGG - chr3_3:1618022-1618041 None:intergenic 40.0%
! GTATTTCAAGTAGGCGTAGT+AGG - chr3_3:1618073-1618092 None:intergenic 40.0%
!! ATCTAATTTGCTCGAGAGGA+GGG - chr3_3:1618280-1618299 None:intergenic 40.0%
!! TATCTAATTTGCTCGAGAGG+AGG - chr3_3:1618281-1618300 None:intergenic 40.0%
ATAAGGGAGAGGATATATGC+AGG + chr3_3:1618316-1618335 Msa0437690:intron 40.0%
CTTCTGTGACAAGTTGTTTG+TGG - chr3_3:1618417-1618436 None:intergenic 40.0%
CACAAACAACTTGTCACAGA+AGG + chr3_3:1618415-1618434 Msa0437690:intron 40.0%
TTGCAGTTGTGTTTACGAAC+GGG + chr3_3:1618476-1618495 Msa0437690:intron 40.0%
! TTTAGGGTCAGATAAAGGGT+TGG - chr3_3:1618559-1618578 None:intergenic 40.0%
ACTTAAAACCTAGTTGCGCA+AGG + chr3_3:1618579-1618598 Msa0437690:intron 40.0%
ATGTGGGATTGTAAGGTTGA+AGG - chr3_3:1618628-1618647 None:intergenic 40.0%
! TCTTTTGACATTCCGTTCGT+AGG + chr3_3:1618649-1618668 Msa0437690:intron 40.0%
!! TGGCTCTTGATAATGTTGTC+GGG - chr3_3:1618744-1618763 None:intergenic 40.0%
TCGGTCTGTTATACATGTTG+AGG + chr3_3:1618925-1618944 Msa0437690:intron 40.0%
TCAGTGCCAATCTCAGTTAA+AGG + chr3_3:1619000-1619019 Msa0437690:intron 40.0%
CAGAGAACTCCTATCATCAA+TGG + chr3_3:1619108-1619127 Msa0437690:CDS 40.0%
AACTCCTATCATCAATGGCA+AGG + chr3_3:1619113-1619132 Msa0437690:CDS 40.0%
! TTCACCTTGCCATTGATGAT+AGG - chr3_3:1619120-1619139 None:intergenic 40.0%
CAAAAACCCAGCAAACATCA+CGG - chr3_3:1619234-1619253 None:intergenic 40.0%
CAACAGAAATGTGAGCACAT+GGG - chr3_3:1619348-1619367 None:intergenic 40.0%
AAATCAGCTATCCACCAGAA+GGG - chr3_3:1619483-1619502 None:intergenic 40.0%
TAAATCAGCTATCCACCAGA+AGG - chr3_3:1619484-1619503 None:intergenic 40.0%
!! AAGGCTAGTTTGGTAGCTAT+GGG + chr3_3:1619626-1619645 Msa0437690:intron 40.0%
GCCCTTAAGGCTCAAATTTA+TGG + chr3_3:1619653-1619672 Msa0437690:intron 40.0%
GGCTCAAATTTATGGCTGTT+TGG + chr3_3:1619661-1619680 Msa0437690:intron 40.0%
GTTATCTGACGAAGCAAAGA+AGG + chr3_3:1619881-1619900 Msa0437690:CDS 40.0%
TGAAGCTGTAAAACATGCTC+TGG + chr3_3:1619905-1619924 Msa0437690:CDS 40.0%
GAACTTAAACACCTGCCTTA+TGG + chr3_3:1619992-1620011 Msa0437690:CDS 40.0%
TCAATACTAACCCATAAGGC+AGG - chr3_3:1620006-1620025 None:intergenic 40.0%
AACCTGAGATACGTAGGAAA+CGG - chr3_3:1620166-1620185 None:intergenic 40.0%
TAAACACTCTTCCAAAGCAG+TGG - chr3_3:1620241-1620260 None:intergenic 40.0%
CTTTAGATTTGCAGACCAGT+AGG + chr3_3:1620347-1620366 Msa0437690:intron 40.0%
CAGCATTCAATGAAACCTAC+TGG - chr3_3:1620365-1620384 None:intergenic 40.0%
TCAAATGCAGCTGAGATTAC+AGG - chr3_3:1620403-1620422 None:intergenic 40.0%
! GTCAAAGCCAACTCTGAAAA+TGG - chr3_3:1620448-1620467 None:intergenic 40.0%
!! AATATGGGTTGATGAGTGAC+AGG - chr3_3:1620512-1620531 None:intergenic 40.0%
CTCTGGCACAAATAAACTAG+AGG - chr3_3:1620616-1620635 None:intergenic 40.0%
GCAACCCTTAATGTATCTGT+AGG + chr3_3:1620719-1620738 Msa0437690:three_prime_UTR 40.0%
CCAGATTTGAGAATAGGTTC+TGG - chr3_3:1620791-1620810 None:intergenic 40.0%
CCAGAACCTATTCTCAAATC+TGG + chr3_3:1620788-1620807 Msa0437690:three_prime_UTR 40.0%
CTAGTCCCAGATTTGAGAAT+AGG - chr3_3:1620797-1620816 None:intergenic 40.0%
ACAAGTGAGTTTGGCCAAGT+CGG - chr3_3:1609113-1609132 None:intergenic 45.0%
TATGGACGTAGCGTAGCATA+AGG + chr3_3:1609396-1609415 Msa0437690:intron 45.0%
ATGGACGTAGCGTAGCATAA+GGG + chr3_3:1609397-1609416 Msa0437690:intron 45.0%
CGTAGCATAAGGGGTTAACT+AGG + chr3_3:1609407-1609426 Msa0437690:intron 45.0%
AGAAAGGTGGCATCAAGGAA+TGG - chr3_3:1609500-1609519 None:intergenic 45.0%
GTGAACAGTAACCGCAATTG+TGG - chr3_3:1609706-1609725 None:intergenic 45.0%
! GCTCTGAACGTTCCATGAAA+CGG - chr3_3:1609908-1609927 None:intergenic 45.0%
ACCATCTTGAACGCTTCCTA+CGG - chr3_3:1609998-1610017 None:intergenic 45.0%
TCCATATGGTTATGGCAGCA+CGG + chr3_3:1610116-1610135 Msa0437690:CDS 45.0%
GGCTGAGAATAAGCAGGATT+AGG - chr3_3:1610180-1610199 None:intergenic 45.0%
! AGACCCAGTATTCTGAAAGG+AGG - chr3_3:1610247-1610266 None:intergenic 45.0%
CAGAATACTGGGTCTAATGC+TGG + chr3_3:1610252-1610271 Msa0437690:CDS 45.0%
GGAGGTTACCAAAACAGCAA+CGG + chr3_3:1610327-1610346 Msa0437690:CDS 45.0%
!!! TTGCGTATCCGTTGCTGTTT+TGG - chr3_3:1610338-1610357 None:intergenic 45.0%
GTATTGTGGCTGATACTGCA+CGG - chr3_3:1610472-1610491 None:intergenic 45.0%
GCCACAATACAATCAATGGG+CGG + chr3_3:1610482-1610501 Msa0437690:CDS 45.0%
! TCCGCCCATTGATTGTATTG+TGG - chr3_3:1610486-1610505 None:intergenic 45.0%
TGTGGAGGCTGGTAATTTGA+AGG - chr3_3:1610630-1610649 None:intergenic 45.0%
GACTCTTGCACCCAATATTG+TGG - chr3_3:1610660-1610679 None:intergenic 45.0%
GTGGTGGTCATGATGATTAC+TGG + chr3_3:1611029-1611048 Msa0437690:CDS 45.0%
!!! GAGCTATCTTTTTCGGGCTT+AGG - chr3_3:1611367-1611386 None:intergenic 45.0%
GAAAAGATCTCCCCACACTT+CGG - chr3_3:1611840-1611859 None:intergenic 45.0%
GTCCAGATTTATCAGTGAGC+AGG - chr3_3:1612381-1612400 None:intergenic 45.0%
ATGTTTCCCAAGTCTTTGCG+TGG + chr3_3:1612827-1612846 Msa0437690:CDS 45.0%
ACATAGCCACGCAAAGACTT+GGG - chr3_3:1612836-1612855 None:intergenic 45.0%
AACATAGCCACGCAAAGACT+TGG - chr3_3:1612837-1612856 None:intergenic 45.0%
TCATGCTCTGTTTGATCCCA+AGG - chr3_3:1613132-1613151 None:intergenic 45.0%
CATGTCCTTTCTGTGCACTT+GGG - chr3_3:1613535-1613554 None:intergenic 45.0%
TCATGTCCTTTCTGTGCACT+TGG - chr3_3:1613536-1613555 None:intergenic 45.0%
AGCCCAGTTTGAATCGTTCT+TGG + chr3_3:1613839-1613858 Msa0437690:intron 45.0%
GCACCAAGAACGATTCAAAC+TGG - chr3_3:1613845-1613864 None:intergenic 45.0%
TAGGTAGAACTTATCCTGGC+TGG - chr3_3:1614033-1614052 None:intergenic 45.0%
GCCTTAGTGATCATCTGCAA+AGG - chr3_3:1614187-1614206 None:intergenic 45.0%
GTACCCTATGCACACGTAAT+TGG + chr3_3:1614218-1614237 Msa0437690:CDS 45.0%
TTATTGTCTGCATCTGCCTC+CGG - chr3_3:1614268-1614287 None:intergenic 45.0%
! ACTTCCCCCTGTTCTTTTAC+TGG + chr3_3:1614406-1614425 Msa0437690:intron 45.0%
ATTCAATTCAGACGGTCTGG+AGG + chr3_3:1614496-1614515 Msa0437690:intron 45.0%
TTCAATTCAGACGGTCTGGA+GGG + chr3_3:1614497-1614516 Msa0437690:intron 45.0%
! GACACAGGATGATGGTTAAC+CGG - chr3_3:1615214-1615233 None:intergenic 45.0%
AGCATTTATTTAGGGGTGGG+GGG - chr3_3:1615963-1615982 None:intergenic 45.0%
TCCTCCATGTTCTGTTTGAG+TGG + chr3_3:1616115-1616134 Msa0437690:intron 45.0%
CCTCCATGTTCTGTTTGAGT+GGG + chr3_3:1616116-1616135 Msa0437690:intron 45.0%
AAGCCCACTCAAACAGAACA+TGG - chr3_3:1616122-1616141 None:intergenic 45.0%
TTGCTCATAATCGAGATCCG+GGG - chr3_3:1616161-1616180 None:intergenic 45.0%
TTGCTTATCCTTGACCTCAG+AGG + chr3_3:1616541-1616560 Msa0437690:intron 45.0%
TGCTTATCCTTGACCTCAGA+GGG + chr3_3:1616542-1616561 Msa0437690:intron 45.0%
CACCTAAATGAATGGCATGC+AGG + chr3_3:1616671-1616690 Msa0437690:intron 45.0%
CACCTGCATGCCATTCATTT+AGG - chr3_3:1616676-1616695 None:intergenic 45.0%
CTAAATGAATGGCATGCAGG+TGG + chr3_3:1616674-1616693 Msa0437690:intron 45.0%
AAGAGAGCAAGGAAGACAGT+TGG + chr3_3:1616709-1616728 Msa0437690:CDS 45.0%
TATCGAGTAAAGCTCCCCAA+AGG + chr3_3:1616766-1616785 Msa0437690:CDS 45.0%
GCTGCTTCTTAAATGGCCTT+TGG - chr3_3:1616785-1616804 None:intergenic 45.0%
GCAAGACGCTGCTTCTTAAA+TGG - chr3_3:1616792-1616811 None:intergenic 45.0%
CTGGGATGCTCTTACTGTAA+AGG + chr3_3:1617103-1617122 Msa0437690:CDS 45.0%
!! TCGCTTTTCAATTTCCTGGC+AGG - chr3_3:1617132-1617151 None:intergenic 45.0%
AAAGGAGATATTACGGTGGC+GGG - chr3_3:1617182-1617201 None:intergenic 45.0%
TTCGTTGCACAGTTAGGTCT+TGG - chr3_3:1617389-1617408 None:intergenic 45.0%
ATATGAAACTCATGCCCGGT+TGG + chr3_3:1617763-1617782 Msa0437690:CDS 45.0%
GGACCTGCCTGAATATAATC+AGG + chr3_3:1617799-1617818 Msa0437690:CDS 45.0%
ACAAAACAGTCTGTCTCGTC+AGG + chr3_3:1618247-1618266 Msa0437690:intron 45.0%
TTTCTACTGTGCGTGCATCT+TGG - chr3_3:1618354-1618373 None:intergenic 45.0%
ACACAACTGCAATCCAAGAC+CGG - chr3_3:1618468-1618487 None:intergenic 45.0%
AAAACCTAGTTGCGCAAGGA+TGG + chr3_3:1618583-1618602 Msa0437690:intron 45.0%
AAACCTAGTTGCGCAAGGAT+GGG + chr3_3:1618584-1618603 Msa0437690:intron 45.0%
GGGATTGTAAGGTTGAAGGT+GGG - chr3_3:1618624-1618643 None:intergenic 45.0%
TGGGATTGTAAGGTTGAAGG+TGG - chr3_3:1618625-1618644 None:intergenic 45.0%
TGTAGCTCAGCATGGAAACA+TGG + chr3_3:1618672-1618691 Msa0437690:intron 45.0%
TCAGCATGGAAACATGGTTG+AGG + chr3_3:1618678-1618697 Msa0437690:intron 45.0%
CTTTATGCTGAAGGGATCGA+AGG + chr3_3:1619025-1619044 Msa0437690:CDS 45.0%
! TTGTTGGTCCTTTGGGAGTT+AGG + chr3_3:1619262-1619281 Msa0437690:intron 45.0%
TTATGGGACCTAACTCCCAA+AGG - chr3_3:1619273-1619292 None:intergenic 45.0%
GCAACAGAAATGTGAGCACA+TGG - chr3_3:1619349-1619368 None:intergenic 45.0%
AATCAGCTATCCACCAGAAG+GGG - chr3_3:1619482-1619501 None:intergenic 45.0%
! TTGTTTGGGCAAGGCTAGTT+TGG + chr3_3:1619616-1619635 Msa0437690:intron 45.0%
!! CAAGGCTAGTTTGGTAGCTA+TGG + chr3_3:1619625-1619644 Msa0437690:intron 45.0%
! CTAGTTTGGTAGCTATGGGA+GGG + chr3_3:1619630-1619649 Msa0437690:intron 45.0%
! TAGTTTGGTAGCTATGGGAG+GGG + chr3_3:1619631-1619650 Msa0437690:intron 45.0%
AGATACGTAGGAAACGGGTA+CGG - chr3_3:1620160-1620179 None:intergenic 45.0%
ACCTGAGATACGTAGGAAAC+GGG - chr3_3:1620165-1620184 None:intergenic 45.0%
TCCTACGTATCTCAGGTTCT+AGG + chr3_3:1620168-1620187 Msa0437690:CDS 45.0%
TCCTAGAACCTGAGATACGT+AGG - chr3_3:1620172-1620191 None:intergenic 45.0%
! CAAATCTGGGACTAGTGTCA+TGG + chr3_3:1620802-1620821 Msa0437690:three_prime_UTR 45.0%
GGGTGCTTACCATTCTTTCT+TGG + chr3_3:1620902-1620921 Msa0437690:three_prime_UTR 45.0%
!! AATATTAATATGTATAATAT+TGG + chr3_3:1611594-1611613 Msa0437690:intron 5.0%
!!! TTATAAAACTTTTTTTTTTA+CGG + chr3_3:1611987-1612006 Msa0437690:intron 5.0%
!!! TTATAGATATATTTAATTTA+TGG + chr3_3:1615295-1615314 Msa0437690:intron 5.0%
!! ATAAAACTTATAATTAATTT+AGG + chr3_3:1616312-1616331 Msa0437690:intron 5.0%
!! TAAAACTTATAATTAATTTA+GGG + chr3_3:1616313-1616332 Msa0437690:intron 5.0%
!! TAATAAATTGAATATAAATA+AGG + chr3_3:1618299-1618318 Msa0437690:intron 5.0%
!! AATAAATTGAATATAAATAA+GGG + chr3_3:1618300-1618319 Msa0437690:intron 5.0%
TGGACGTAGCGTAGCATAAG+GGG + chr3_3:1609398-1609417 Msa0437690:intron 50.0%
TCATAACGCGGCCACAATTG+CGG + chr3_3:1609692-1609711 Msa0437690:intron 50.0%
GGCTTCAGAACCAGATGTCA+TGG - chr3_3:1609887-1609906 None:intergenic 50.0%
!! CTGGTTCTGAAGCCGTTTCA+TGG + chr3_3:1609893-1609912 Msa0437690:CDS 50.0%
TGCTGGTCATACTGGTAGGT+CGG - chr3_3:1609958-1609977 None:intergenic 50.0%
CCATCTTGAACGCTTCCTAC+GGG - chr3_3:1609997-1610016 None:intergenic 50.0%
CCATATGGTTATGGCAGCAC+GGG + chr3_3:1610117-1610136 Msa0437690:CDS 50.0%
CCTACAGGCTGAGAATAAGC+AGG - chr3_3:1610186-1610205 None:intergenic 50.0%
CCTGCTTATTCTCAGCCTGT+AGG + chr3_3:1610183-1610202 Msa0437690:CDS 50.0%
CCAGTGGTCTGATAATCAGC+AGG - chr3_3:1610309-1610328 None:intergenic 50.0%
! CCTGCTGATTATCAGACCAC+TGG + chr3_3:1610306-1610325 Msa0437690:CDS 50.0%
GCTGATTATCAGACCACTGG+AGG + chr3_3:1610309-1610328 Msa0437690:CDS 50.0%
!!! GCTGTTTTGGTAACCTCCAG+TGG - chr3_3:1610325-1610344 None:intergenic 50.0%
! GGGCACAACTGACTTCTGTT+TGG - chr3_3:1610518-1610537 None:intergenic 50.0%
AGACAAGTTCTCTGTCCCTG+GGG - chr3_3:1610538-1610557 None:intergenic 50.0%
CAGACAAGTTCTCTGTCCCT+GGG - chr3_3:1610539-1610558 None:intergenic 50.0%
ACAGACAAGTTCTCTGTCCC+TGG - chr3_3:1610540-1610559 None:intergenic 50.0%
GCATAACCACTAGTAGCTGC+AGG - chr3_3:1610606-1610625 None:intergenic 50.0%
GTGGATATGATTGTGGAGGC+TGG - chr3_3:1610641-1610660 None:intergenic 50.0%
CAGCCTGCTGCAGTAAATAG+TGG + chr3_3:1611010-1611029 Msa0437690:intron 50.0%
CCACCACTATTTACTGCAGC+AGG - chr3_3:1611016-1611035 None:intergenic 50.0%
CCTGCTGCAGTAAATAGTGG+TGG + chr3_3:1611013-1611032 Msa0437690:CDS 50.0%
ATGCAGAGGTCTACGAGACT+AGG + chr3_3:1612073-1612092 Msa0437690:intron 50.0%
!! GAGGTCTGGCCTTAGTGAAA+TGG + chr3_3:1612122-1612141 Msa0437690:intron 50.0%
TAAGCAAATGGCAGCATGCC+AGG + chr3_3:1612886-1612905 Msa0437690:CDS 50.0%
ATGCCAGGCTGTCATGAAAG+AGG + chr3_3:1612901-1612920 Msa0437690:CDS 50.0%
TCACCTCTTTCATGACAGCC+TGG - chr3_3:1612907-1612926 None:intergenic 50.0%
GAACGATTCAAACTGGGCTC+TGG - chr3_3:1613838-1613857 None:intergenic 50.0%
GTGACATGTCAACTCGGAGA+AGG - chr3_3:1614313-1614332 None:intergenic 50.0%
TCAATTCAGACGGTCTGGAG+GGG + chr3_3:1614498-1614517 Msa0437690:intron 50.0%
GTTGGGTGATTAGAGGAGCA+GGG - chr3_3:1614802-1614821 None:intergenic 50.0%
AGTTGGGTGATTAGAGGAGC+AGG - chr3_3:1614803-1614822 None:intergenic 50.0%
! GACACAGGATGATGGTCAAC+CGG - chr3_3:1615151-1615170 None:intergenic 50.0%
! ACAGGATGATGGTTAACCGG+CGG - chr3_3:1615211-1615230 None:intergenic 50.0%
!! TCTATGTTGGCTCCTGGGTT+TGG + chr3_3:1616045-1616064 Msa0437690:intron 50.0%
CCCACTCAAACAGAACATGG+AGG - chr3_3:1616119-1616138 None:intergenic 50.0%
GCTTATCCTTGACCTCAGAG+GGG + chr3_3:1616543-1616562 Msa0437690:intron 50.0%
CTTATCCTTGACCTCAGAGG+GGG + chr3_3:1616544-1616563 Msa0437690:intron 50.0%
!! TTATACCCCCTCTGAGGTCA+AGG - chr3_3:1616552-1616571 None:intergenic 50.0%
AGAGCAAGGAAGACAGTTGG+AGG + chr3_3:1616712-1616731 Msa0437690:CDS 50.0%
! TGGTGTCAGCAAAGCTGTTG+AGG + chr3_3:1617073-1617092 Msa0437690:CDS 50.0%
!! TACTGTAAAGGGTACCTGCC+AGG + chr3_3:1617115-1617134 Msa0437690:CDS 50.0%
AGATTCTACCTAGAACCGGG+TGG + chr3_3:1618004-1618023 Msa0437690:intron 50.0%
TTGCTCGAGAGGAGGGAAAT+AGG - chr3_3:1618273-1618292 None:intergenic 50.0%
AGCAAAGTCAGTGTCAGTCC+CGG + chr3_3:1618446-1618465 Msa0437690:intron 50.0%
CACAACTGCAATCCAAGACC+GGG - chr3_3:1618467-1618486 None:intergenic 50.0%
TTTCCCATCCTTGCGCAACT+AGG - chr3_3:1618590-1618609 None:intergenic 50.0%
TGCTGAGCTACACCTACGAA+CGG - chr3_3:1618664-1618683 None:intergenic 50.0%
TTCGTAGGTGTAGCTCAGCA+TGG + chr3_3:1618664-1618683 Msa0437690:intron 50.0%
AGGGATCGAAGGCTCGTATA+TGG + chr3_3:1619036-1619055 Msa0437690:CDS 50.0%
! CAGCCTAGGTGAAGCGTTAA+TGG + chr3_3:1619456-1619475 Msa0437690:intron 50.0%
! GCTAGTTTGGTAGCTATGGG+AGG + chr3_3:1619629-1619648 Msa0437690:intron 50.0%
GTTCGTGCAGCTGTAACTTC+AGG + chr3_3:1619930-1619949 Msa0437690:CDS 50.0%
! CCTGCATGTGCCGATCATAT+CGG + chr3_3:1620130-1620149 Msa0437690:CDS 50.0%
! GTACGGTTGGCCGATATGAT+CGG - chr3_3:1620143-1620162 None:intergenic 50.0%
ACCCGTTTCCTACGTATCTC+AGG + chr3_3:1620161-1620180 Msa0437690:CDS 50.0%
TGAGAAAGAGGCCACTGCTT+TGG + chr3_3:1620227-1620246 Msa0437690:CDS 50.0%
GGGGTTGTTGGCGAAAACGA+TGG - chr3_3:1608643-1608662 None:intergenic 55.0%
GTTCAGAGCTCCACAGCGAA+TGG + chr3_3:1609919-1609938 Msa0437690:CDS 55.0%
CGGATGCTGGTCATACTGGT+AGG - chr3_3:1609962-1609981 None:intergenic 55.0%
TCTTGAACGCTTCCTACGGG+CGG - chr3_3:1609994-1610013 None:intergenic 55.0%
!! CCCGTAGGAAGCGTTCAAGA+TGG + chr3_3:1609994-1610013 Msa0437690:CDS 55.0%
CCCGTGCTGCCATAACCATA+TGG - chr3_3:1610120-1610139 None:intergenic 55.0%
CGGATACGCAAATCAAGCGC+CGG + chr3_3:1610347-1610366 Msa0437690:CDS 55.0%
ACAGAAGTCAGTTGTGCCCC+AGG + chr3_3:1610519-1610538 Msa0437690:CDS 55.0%
CAGAAGTCAGTTGTGCCCCA+GGG + chr3_3:1610520-1610539 Msa0437690:CDS 55.0%
ATTCACCTGTTGAGGGGGAG+GGG - chr3_3:1611242-1611261 None:intergenic 55.0%
GATTCACCTGTTGAGGGGGA+GGG - chr3_3:1611243-1611262 None:intergenic 55.0%
AGATTCACCTGTTGAGGGGG+AGG - chr3_3:1611244-1611263 None:intergenic 55.0%
TCCCCCTCAACAGGTGAATC+TGG + chr3_3:1611243-1611262 Msa0437690:CDS 55.0%
GCCAGATTCACCTGTTGAGG+GGG - chr3_3:1611247-1611266 None:intergenic 55.0%
CGCCAGATTCACCTGTTGAG+GGG - chr3_3:1611248-1611267 None:intergenic 55.0%
GCGCCAGATTCACCTGTTGA+GGG - chr3_3:1611249-1611268 None:intergenic 55.0%
CTTCAGTGCTGCACTGGATG+TGG - chr3_3:1611389-1611408 None:intergenic 55.0%
GGAACCACTCTTCCCAATGC+CGG + chr3_3:1614246-1614265 Msa0437690:CDS 55.0%
TAGGTGGGAGCCATTACCAG+AGG + chr3_3:1615120-1615139 Msa0437690:CDS 55.0%
GCCATTACCAGAGGAGAAGC+CGG + chr3_3:1615129-1615148 Msa0437690:CDS 55.0%
! ACCGGCTTCTCCTCTGGTAA+TGG - chr3_3:1615133-1615152 None:intergenic 55.0%
! ATACAGTAGTTGGGTGCCGC+CGG + chr3_3:1615192-1615211 Msa0437690:CDS 55.0%
AAAGGAAGACGGCCAAACCC+AGG - chr3_3:1616060-1616079 None:intergenic 55.0%
GAATGGCATGCAGGTGGTAG+TGG + chr3_3:1616680-1616699 Msa0437690:intron 55.0%
! CAACAGAAGGGCTAGTGCTC+TGG + chr3_3:1617028-1617047 Msa0437690:CDS 55.0%
GCGATACCTGCGCCTAACAT+CGG + chr3_3:1617148-1617167 Msa0437690:CDS 55.0%
!! GATATTACGGTGGCGGGATC+TGG - chr3_3:1617176-1617195 None:intergenic 55.0%
ATGAATCGGCCTCGCCTACA+TGG + chr3_3:1617649-1617668 Msa0437690:intron 55.0%
TGAATCGGCCTCGCCTACAT+GGG + chr3_3:1617650-1617669 Msa0437690:intron 55.0%
AAAGCCTTCCCATGTAGGCG+AGG - chr3_3:1617661-1617680 None:intergenic 55.0%
TCGCCTACATGGGAAGGCTT+TGG + chr3_3:1617660-1617679 Msa0437690:intron 55.0%
CCACCAAAGCCTTCCCATGT+AGG - chr3_3:1617666-1617685 None:intergenic 55.0%
! CCTACATGGGAAGGCTTTGG+TGG + chr3_3:1617663-1617682 Msa0437690:intron 55.0%
! ACATGGGAAGGCTTTGGTGG+TGG + chr3_3:1617666-1617685 Msa0437690:intron 55.0%
ACTTGACACCACCCGGTTCT+AGG - chr3_3:1618015-1618034 None:intergenic 55.0%
GGGCCATTAACGCTTCACCT+AGG - chr3_3:1619462-1619481 None:intergenic 55.0%
! GAAGCGTTAATGGCCCCTTC+TGG + chr3_3:1619466-1619485 Msa0437690:intron 55.0%
CCGATATGATCGGCACATGC+AGG - chr3_3:1620133-1620152 None:intergenic 55.0%
ACGTAGGAAACGGGTACGGT+TGG - chr3_3:1620156-1620175 None:intergenic 55.0%
AGCAAGGTTGGCATCTCCGT+GGG - chr3_3:1620655-1620674 None:intergenic 55.0%
GCTGCGGATGCTGGTCATAC+TGG - chr3_3:1609966-1609985 None:intergenic 60.0%
!! ACGCAAATCAAGCGCCGGCA+TGG + chr3_3:1610352-1610371 Msa0437690:CDS 60.0%
CCACTAGTAGCTGCAGGAGC+AGG - chr3_3:1610600-1610619 None:intergenic 60.0%
CCTGCTCCTGCAGCTACTAG+TGG + chr3_3:1610597-1610616 Msa0437690:CDS 60.0%
TCCTGCTGTGCCGCCTTTAC+AGG + chr3_3:1610686-1610705 Msa0437690:CDS 60.0%
ACCTGTAAAGGCGGCACAGC+AGG - chr3_3:1610690-1610709 None:intergenic 60.0%
TTCACCTGTTGAGGGGGAGG+GGG - chr3_3:1611241-1611260 None:intergenic 60.0%
GGCGCCAGATTCACCTGTTG+AGG - chr3_3:1611250-1611269 None:intergenic 60.0%
AGCAGGCTTCAGTGCTGCAC+TGG - chr3_3:1611395-1611414 None:intergenic 60.0%
TCTCTGGTCATCAGCCAGCC+AGG + chr3_3:1614016-1614035 Msa0437690:intron 60.0%
ACCACTCTTCCCAATGCCGG+AGG + chr3_3:1614249-1614268 Msa0437690:CDS 60.0%
CTGCATCTGCCTCCGGCATT+GGG - chr3_3:1614261-1614280 None:intergenic 60.0%
TCTGCATCTGCCTCCGGCAT+TGG - chr3_3:1614262-1614281 None:intergenic 60.0%
! TGGTCAACCGGCTTCTCCTC+TGG - chr3_3:1615139-1615158 None:intergenic 60.0%
AACTCATGCCCGGTTGGCAC+TGG + chr3_3:1617769-1617788 Msa0437690:CDS 60.0%
CCCAACTTCCAGTGCCAACC+GGG - chr3_3:1617780-1617799 None:intergenic 60.0%
! CCCGGTTGGCACTGGAAGTT+GGG + chr3_3:1617777-1617796 Msa0437690:CDS 60.0%
CCCCAACTTCCAGTGCCAAC+CGG - chr3_3:1617781-1617800 None:intergenic 60.0%
! CCGGTTGGCACTGGAAGTTG+GGG + chr3_3:1617778-1617797 Msa0437690:CDS 60.0%
GTCAGTGTCAGTCCCGGTCT+TGG + chr3_3:1618452-1618471 Msa0437690:intron 60.0%
GCGTTAATGGCCCCTTCTGG+TGG + chr3_3:1619469-1619488 Msa0437690:intron 60.0%
AGCTATGGGAGGGGCCCTTA+AGG + chr3_3:1619640-1619659 Msa0437690:intron 60.0%
GCCAGAGCCAGAAGATGCTG+TGG + chr3_3:1620629-1620648 Msa0437690:CDS 60.0%
!! GCCACAGCATCTTCTGGCTC+TGG - chr3_3:1620633-1620652 None:intergenic 60.0%
CCAGAAGATGCTGTGGCCCA+CGG + chr3_3:1620636-1620655 Msa0437690:CDS 60.0%
CAGCAAGGTTGGCATCTCCG+TGG - chr3_3:1620656-1620675 None:intergenic 60.0%
GCAGGAGCAGGAGCAGGAAC+AGG - chr3_3:1610588-1610607 None:intergenic 65.0%
GTAGCTGCAGGAGCAGGAGC+AGG - chr3_3:1610594-1610613 None:intergenic 65.0%
GAGGGGGAGGAGGAGGAAGA+GGG - chr3_3:1611225-1611244 None:intergenic 65.0%
! GCCTCCGGCATTGGGAAGAG+TGG - chr3_3:1614253-1614272 None:intergenic 65.0%
!! CGGGATCTGGCGCCGATGTT+AGG - chr3_3:1617163-1617182 None:intergenic 65.0%
TCGGCCTCGCCTACATGGGA+AGG + chr3_3:1617654-1617673 Msa0437690:intron 65.0%
! GCCCGGTTGGCACTGGAAGT+TGG + chr3_3:1617776-1617795 Msa0437690:CDS 65.0%
CCGTGGGCCACAGCATCTTC+TGG - chr3_3:1620639-1620658 None:intergenic 65.0%
ACGCTTCCTACGGGCGGCTG+CGG - chr3_3:1609988-1610007 None:intergenic 70.0%
! AGGCGGCACAGCAGGAGTGC+TGG - chr3_3:1610682-1610701 None:intergenic 70.0%
GGAGGGGGAGGAGGAGGAAG+AGG - chr3_3:1611226-1611245 None:intergenic 70.0%
TGTTGAGGGGGAGGGGGAGG+AGG - chr3_3:1611235-1611254 None:intergenic 70.0%
TCCTCCCCCTCCCCCTCAAC+AGG + chr3_3:1611234-1611253 Msa0437690:CDS 70.0%
ACCTGTTGAGGGGGAGGGGG+AGG - chr3_3:1611238-1611257 None:intergenic 70.0%
!! CTGGCGCCGATGTTAGGCGC+AGG - chr3_3:1617157-1617176 None:intergenic 70.0%
TGAGGGGGAGGGGGAGGAGG+AGG - chr3_3:1611232-1611251 None:intergenic 75.0%
! GCGGCTGCGGCTGCGGATGC+TGG - chr3_3:1609975-1609994 None:intergenic 80.0%
! CCTACGGGCGGCTGCGGCTG+CGG - chr3_3:1609982-1610001 None:intergenic 80.0%
! CCGCAGCCGCAGCCGCCCGT+AGG + chr3_3:1609979-1609998 Msa0437690:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 1608531 1620990 1608531 ID=Msa0437690;Name=Msa0437690
chr3_3 mRNA 1608531 1620990 1608531 ID=Msa0437690-mRNA-1;Parent=Msa0437690;Name=Msa0437690-mRNA-1;_AED=0.05;_eAED=0.05;_QI=599|1|0.92|1|0.91|0.84|13|283|1011
chr3_3 exon 1608531 1609082 1608531 ID=Msa0437690-mRNA-1:exon:179;Parent=Msa0437690-mRNA-1
chr3_3 exon 1609839 1610707 1609839 ID=Msa0437690-mRNA-1:exon:180;Parent=Msa0437690-mRNA-1
chr3_3 exon 1611013 1611486 1611013 ID=Msa0437690-mRNA-1:exon:181;Parent=Msa0437690-mRNA-1
chr3_3 exon 1612821 1612922 1612821 ID=Msa0437690-mRNA-1:exon:182;Parent=Msa0437690-mRNA-1
chr3_3 exon 1614193 1614290 1614193 ID=Msa0437690-mRNA-1:exon:183;Parent=Msa0437690-mRNA-1
chr3_3 exon 1615051 1615291 1615051 ID=Msa0437690-mRNA-1:exon:184;Parent=Msa0437690-mRNA-1
chr3_3 exon 1616693 1617187 1616693 ID=Msa0437690-mRNA-1:exon:185;Parent=Msa0437690-mRNA-1
chr3_3 exon 1617291 1617431 1617291 ID=Msa0437690-mRNA-1:exon:186;Parent=Msa0437690-mRNA-1
chr3_3 exon 1617761 1617820 1617761 ID=Msa0437690-mRNA-1:exon:187;Parent=Msa0437690-mRNA-1
chr3_3 exon 1619004 1619134 1619004 ID=Msa0437690-mRNA-1:exon:188;Parent=Msa0437690-mRNA-1
chr3_3 exon 1619881 1620014 1619881 ID=Msa0437690-mRNA-1:exon:189;Parent=Msa0437690-mRNA-1
chr3_3 exon 1620094 1620329 1620094 ID=Msa0437690-mRNA-1:exon:190;Parent=Msa0437690-mRNA-1
chr3_3 exon 1620606 1620990 1620606 ID=Msa0437690-mRNA-1:exon:191;Parent=Msa0437690-mRNA-1
chr3_3 five_prime_UTR 1608531 1609082 1608531 ID=Msa0437690-mRNA-1:five_prime_utr;Parent=Msa0437690-mRNA-1
chr3_3 five_prime_UTR 1609839 1609885 1609839 ID=Msa0437690-mRNA-1:five_prime_utr;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1609886 1610707 1609886 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1611013 1611486 1611013 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1612821 1612922 1612821 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1614193 1614290 1614193 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1615051 1615291 1615051 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1616693 1617187 1616693 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1617291 1617431 1617291 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1617761 1617820 1617761 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1619004 1619134 1619004 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1619881 1620014 1619881 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1620094 1620329 1620094 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 CDS 1620606 1620707 1620606 ID=Msa0437690-mRNA-1:cds;Parent=Msa0437690-mRNA-1
chr3_3 three_prime_UTR 1620708 1620990 1620708 ID=Msa0437690-mRNA-1:three_prime_utr;Parent=Msa0437690-mRNA-1
Gene Sequence

>Msa0437690

ATGACATCTGGTTCTGAAGCCGTTTCATGGAACGTTCAGAGCTCCACAGCGAATGGAATTTATTCTAATCCGACCTACCAGTATGACCAGCATCCGCAGCCGCAGCCGCCCGTAGGAAGCGTTCAAGATGGTCAAAGTGTATCATCAGTTGCTGGTAATTCATCAAATTTGGGAACAGCTAATGCACCACAAGATTATAATGCATACGCATCATATGCAAATTCTTCTAATCCATATGGTTATGGCAGCACGGGATACTCAGACTACTATAACAGCTATCAGCAGCAGCAACCTAATCCTGCTTATTCTCAGCCTGTAGGAGCATATCAAAATACAGGTGCTCCTTATCAGCCTATTTCCTCCTTTCAGAATACTGGGTCTAATGCTGGATCCGCAAGTTATTCAAGCACTTATTACAATCCTGCTGATTATCAGACCACTGGAGGTTACCAAAACAGCAACGGATACGCAAATCAAGCGCCGGCATGGAACAATGACAGTTATTCAAGCTATGCCTCTCATCCGTATACAAGTTACGCCACAGATTCCAGTAGCTCTTATAGTACTGGTGCTGCAGCTACTTCCGTGCAGTATCAGCCACAATACAATCAATGGGCGGACTATTACAGCCAAACAGAAGTCAGTTGTGCCCCAGGGACAGAGAACTTGTCTGTCCCAAGTTCATCTACTTTGGGTTGTCCTGTTCCTGCTCCTGCTCCTGCAGCTACTAGTGGTTATGCACCTTCAAATTACCAGCCTCCACAATCATATCCACAATATTGGGTGCAAGAGTCCAGCACTCCTGCTGTGCCGCCTTTACAGCCTGCTGCAGTAAATAGTGGTGGTCATGATGATTACTGGAAACATGGCGCCCAAACTAGTTCTCAAATTCATCAAACTAGTTCTCAAATTCACCAAACTAATCCTATTCAACCAAACTATCAAAGTCATTTGGATTTAAATTCTTCTTATGATAAATTTCAGGATCAACAACAGAAGACAGTATCTTCTCAAGGAACCAATTTGTACTTCCCTCTTCCTCCTCCTCCCCCTCCCCCTCAACAGGTGAATCTGGCGCCCTTACAAAGTGCTCCATCTTTGGATACAAAACGAGTAAACAAGCTTCAGATTCCAACAAATCCTCGAATTGCTTCAAATTTGACATATGAACAACCTAAGCCCGAAAAAGATAGCTCCACATCCAGTGCAGCACTGAAGCCTGCTTATATTGCTGTTTCATTGACAAAACCAACTGAGAAACTATCATCTAATGATGCTGCTAATTCAATACTTAAGCCCGGTATGTTTCCCAAGTCTTTGCGTGGCTATGTTGAAAGAGCTTTGGCTCGTTGTAAAGATGATAAGCAAATGGCAGCATGCCAGGCTGTCATGAAAGAGATGATCACTAAGGCTACAGCTGATTGTACCCTATGCACACGTAATTGGGATATGGAACCACTCTTCCCAATGCCGGAGGCAGATGCAGACAATAAAGATAATTCACTGTCTTCAAGCCATGATTCTGTATTGCCAAAGTCTAGAAAAAGTCCTAGACGATCTAAAAGTAGGTGGGAGCCATTACCAGAGGAGAAGCCGGTTGACCATCATCCTGTGTCAACAAGTAATGATACTGTAAAATACAGTAGTTGGGTGCCGCCGGTTAACCATCATCCTGTGTCAACAAGTAATGATACTGTAAAATACAGTAGTTGGGTGCCTAATGAAAAGGATAGAAAGGTGGTAGTGGAAAACAAAGAGAGCAAGGAAGACAGTTGGAGGAATACAAAATTTTCTCCATTATTTCAGAGAATATCGAGTAAAGCTCCCCAAAGGCCATTTAAGAAGCAGCGTCTTGCTGATGTTTCTACTGCTCATGAAAATGGTGATGCATCTAGTGATAGTGATAAGGAACAAAGTTTGACTGCATATTATTCTGCTGCAATGGCTTTTAATGATACACCAGAGGAAAAGAAAAGACGTGAAAGTCGTTCTAAGCGATTTGATTTAGGACAAGCACAACGAACAGAAAATAATCACTCAAGGAAAAAAAATGCTAGAGCTGGAAACTTGTACAACAGAAGGGCTAGTGCTCTGGTGCTTAGCAAAAGCTTTGATAATGGTGTCAGCAAAGCTGTTGAGGATATTGACTGGGATGCTCTTACTGTAAAGGGTACCTGCCAGGAAATTGAAAAGCGATACCTGCGCCTAACATCGGCGCCAGATCCCGCCACCGTAAGACCTGAAGATGTTCTTGAAAAAGCACTATTAATGGTTCAAAATTCCCAAAGGAATTACCTTTATAAATGTGACCAGTTAAAGTCTATTCGCCAAGACCTAACTGTGCAACGAATACACAACCAATTAACAGTCAAGGTATATGAAACTCATGCCCGGTTGGCACTGGAAGTTGGGGACCTGCCTGAATATAATCAGTGCCAATCTCAGTTAAAGGCTCTTTATGCTGAAGGGATCGAAGGCTCGTATATGGAATTTGCTGCTTACAACTTGCTTTGTGTTATAATGCATTCAAATAACTACAGAGAACTCCTATCATCAATGGCAAGGTTATCTGACGAAGCAAAGAAGGATGAAGCTGTAAAACATGCTCTGGCAGTTCGTGCAGCTGTAACTTCAGGAAATTATGTTGCGTTCTTTAGATTGTACAAAGCAGCTCCGAACTTAAACACCTGCCTTATGGATCTATATGTCGAAAAGATGCGTTATAAAGCTGTGACCTGCATGTGCCGATCATATCGGCCAACCGTACCCGTTTCCTACGTATCTCAGGTTCTAGGATTCTCATCTGTCGTTGTCACAAATGAAGCAAATGATGAGAAAGAGGCCACTGCTTTGGAAGAGTGTTTAGAATGGTTGAAAGCTCATGGTGCCAGTATAATTGCTGATAACAATGGAGACATGATGGTTGATACAAAAGTTTCATCCTCTAGTTTATTTGTGCCAGAGCCAGAAGATGCTGTGGCCCACGGAGATGCCAACCTTGCTGTTAATGATTTTTTAGCAAAGGCACCTTTATAG
Protein sequence

>Msa0437690

MTSGSEAVSWNVQSSTANGIYSNPTYQYDQHPQPQPPVGSVQDGQSVSSVAGNSSNLGTANAPQDYNAYASYANSSNPYGYGSTGYSDYYNSYQQQQPNPAYSQPVGAYQNTGAPYQPISSFQNTGSNAGSASYSSTYYNPADYQTTGGYQNSNGYANQAPAWNNDSYSSYASHPYTSYATDSSSSYSTGAAATSVQYQPQYNQWADYYSQTEVSCAPGTENLSVPSSSTLGCPVPAPAPAATSGYAPSNYQPPQSYPQYWVQESSTPAVPPLQPAAVNSGGHDDYWKHGAQTSSQIHQTSSQIHQTNPIQPNYQSHLDLNSSYDKFQDQQQKTVSSQGTNLYFPLPPPPPPPQQVNLAPLQSAPSLDTKRVNKLQIPTNPRIASNLTYEQPKPEKDSSTSSAALKPAYIAVSLTKPTEKLSSNDAANSILKPGMFPKSLRGYVERALARCKDDKQMAACQAVMKEMITKATADCTLCTRNWDMEPLFPMPEADADNKDNSLSSSHDSVLPKSRKSPRRSKSRWEPLPEEKPVDHHPVSTSNDTVKYSSWVPPVNHHPVSTSNDTVKYSSWVPNEKDRKVVVENKESKEDSWRNTKFSPLFQRISSKAPQRPFKKQRLADVSTAHENGDASSDSDKEQSLTAYYSAAMAFNDTPEEKKRRESRSKRFDLGQAQRTENNHSRKKNARAGNLYNRRASALVLSKSFDNGVSKAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPATVRPEDVLEKALLMVQNSQRNYLYKCDQLKSIRQDLTVQRIHNQLTVKVYETHARLALEVGDLPEYNQCQSQLKALYAEGIEGSYMEFAAYNLLCVIMHSNNYRELLSSMARLSDEAKKDEAVKHALAVRAAVTSGNYVAFFRLYKAAPNLNTCLMDLYVEKMRYKAVTCMCRSYRPTVPVSYVSQVLGFSSVVVTNEANDEKEATALEECLEWLKAHGASIIADNNGDMMVDTKVSSSSLFVPEPEDAVAHGDANLAVNDFLAKAPL*