AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0509950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509950 MtrunA17_Chr3g0115101 90.472 1018 16 4 1 1011 1 944 0.0 1834
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0509950 AT2G39340.1 53.921 1033 386 23 2 1008 37 1005 0.0 957

Find 288 sgRNAs with CRISPR-Local

Find 806 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGGTAATTCATCAAATT+TGG 0.051963 3_4:+58600315 Msa0509950:CDS
TCCTGCTGTGCCGCCTTTAC+AGG 0.137684 3_4:+58600966 Msa0509950:CDS
TGTCGATTGAAGAAGGAATT+AGG 0.171630 3_4:-58599260 None:intergenic
GTACCCTATGCACACGTAAT+TGG 0.176540 3_4:+58604498 Msa0509950:CDS
CGTTCTAAGCGATTTGATTT+AGG 0.215889 3_4:+58607222 Msa0509950:CDS
TTCTTCTTATGATAAATTTC+AGG 0.216493 3_4:+58601433 Msa0509950:CDS
ATTTCCTCCTTTCAGAATAC+TGG 0.222746 3_4:+58600520 Msa0509950:CDS
TCCAAATGACTTTGATAGTT+TGG 0.223926 3_4:-58601404 None:intergenic
CACAATCATATCCACAATAT+TGG 0.236437 3_4:+58600926 Msa0509950:CDS
CTTACAAAGTGCTCCATCTT+TGG 0.247433 3_4:+58601550 Msa0509950:CDS
CTCGATATTCTCTGAAATAA+TGG 0.250084 3_4:-58607030 None:intergenic
GAACTTAAACACCTGCCTTA+TGG 0.252251 3_4:+58610272 Msa0509950:CDS
GATGAATTTGAGAACTAGTT+TGG 0.252769 3_4:-58601343 None:intergenic
ACAAACCTACAGATACATTA+AGG 0.255906 3_4:-58611004 None:intergenic
TCAGTGCCAATCTCAGTTAA+AGG 0.258907 3_4:+58609280 Msa0509950:intron
AACTTAAACACCTGCCTTAT+GGG 0.259233 3_4:+58610273 Msa0509950:CDS
CTGCTTCTTAAATGGCCTTT+GGG 0.260755 3_4:-58607061 None:intergenic
ATAATTAAATACTATGTAAA+AGG 0.272883 3_4:+58611109 Msa0509950:three_prime_UTR
TTGCGTATCCGTTGCTGTTT+TGG 0.287700 3_4:-58600615 None:intergenic
GTAGTACCTTGACTGTTAAT+TGG 0.288051 3_4:-58607696 None:intergenic
CCCGGTTGGCACTGGAAGTT+GGG 0.289514 3_4:+58608057 Msa0509950:CDS
GGGTGCTTACCATTCTTTCT+TGG 0.292774 3_4:+58611182 Msa0509950:three_prime_UTR
CCAGAACCTATTCTCAAATC+TGG 0.295243 3_4:+58611068 Msa0509950:three_prime_UTR
GCGGCTGCGGCTGCGGATGC+TGG 0.296808 3_4:-58600252 None:intergenic
GCAAGACGCTGCTTCTTAAA+TGG 0.300355 3_4:-58607069 None:intergenic
CTTTGATAGTTTGGTTGAAT+AGG 0.300385 3_4:-58601395 None:intergenic
TTAACTGGTCACATTTATAA+AGG 0.309288 3_4:-58607633 None:intergenic
CCGTGGGCCACAGCATCTTC+TGG 0.309619 3_4:-58610916 None:intergenic
TGTAAAAGGAAAATAGAAAA+TGG 0.310413 3_4:+58611123 Msa0509950:three_prime_UTR
GTTTCTACTGCTCATGAAAA+TGG 0.311872 3_4:+58607096 Msa0509950:CDS
ATTTATAAAGGTAATTCCTT+TGG 0.313444 3_4:-58607621 None:intergenic
GTCCCAAGTTCATCTACTTT+GGG 0.314090 3_4:+58600838 Msa0509950:CDS
GCTGGTAATTCATCAAATTT+GGG 0.328650 3_4:+58600316 Msa0509950:CDS
ATTAGGGTTCGTTGTAGATT+AGG 0.333676 3_4:-58599243 None:intergenic
ACCAAACTATCAAAGTCATT+TGG 0.335372 3_4:+58601403 Msa0509950:CDS
CGGGATCTGGCGCCGATGTT+AGG 0.338007 3_4:-58607440 None:intergenic
TCTGCATCTGCCTCCGGCAT+TGG 0.339714 3_4:-58604539 None:intergenic
TTGGTTGAATAGGATTAGTT+TGG 0.345571 3_4:-58601385 None:intergenic
GTCGATTGAAGAAGGAATTA+GGG 0.356758 3_4:-58599259 None:intergenic
CTGCATCTGCCTCCGGCATT+GGG 0.356862 3_4:-58604538 None:intergenic
TTAGGGTTCGTTGTAGATTA+GGG 0.359293 3_4:-58599242 None:intergenic
TTTATAAAGGTAATTCCTTT+GGG 0.360413 3_4:-58607620 None:intergenic
CCTACGGGCGGCTGCGGCTG+CGG 0.360451 3_4:-58600259 None:intergenic
TCTTCTAATCCATATGGTTA+TGG 0.361279 3_4:+58600388 Msa0509950:CDS
TGTCCCAAGTTCATCTACTT+TGG 0.362411 3_4:+58600837 Msa0509950:CDS
CTGGTTCTGAAGCCGTTTCA+TGG 0.363728 3_4:+58600173 Msa0509950:CDS
GCTGCTTCTTAAATGGCCTT+TGG 0.363898 3_4:-58607062 None:intergenic
TCCTACGTATCTCAGGTTCT+AGG 0.367060 3_4:+58610448 Msa0509950:CDS
ACAGACAAGTTCTCTGTCCC+TGG 0.368424 3_4:-58600817 None:intergenic
GTATTCTGAAAGGAGGAAAT+AGG 0.369237 3_4:-58600517 None:intergenic
ATGCACACGTAATTGGGATA+TGG 0.369705 3_4:+58604505 Msa0509950:CDS
CTTGGCGAATAGACTTTAAC+TGG 0.370716 3_4:-58607648 None:intergenic
ATTGTAGTCAGAATAGAAAA+AGG 0.378337 3_4:+58611030 Msa0509950:three_prime_UTR
GCCCGGTTGGCACTGGAAGT+TGG 0.378623 3_4:+58608056 Msa0509950:CDS
AGGGATCGAAGGCTCGTATA+TGG 0.383381 3_4:+58609316 Msa0509950:CDS
CTAGTCCCAGATTTGAGAAT+AGG 0.387823 3_4:-58611074 None:intergenic
ATGAATTTGAGAACTAGTTT+GGG 0.391251 3_4:-58601342 None:intergenic
ACAATCATATCCACAATATT+GGG 0.394547 3_4:+58600927 Msa0509950:CDS
TACCCTATGCACACGTAATT+GGG 0.398034 3_4:+58604499 Msa0509950:CDS
TGTGTATTCGTTGCACAGTT+AGG 0.398571 3_4:-58607672 None:intergenic
CCCCAACTTCCAGTGCCAAC+CGG 0.400824 3_4:-58608058 None:intergenic
GATATTACGGTGGCGGGATC+TGG 0.401090 3_4:-58607453 None:intergenic
TTCGTTGCACAGTTAGGTCT+TGG 0.401797 3_4:-58607666 None:intergenic
GGGCACAACTGACTTCTGTT+TGG 0.402893 3_4:-58600795 None:intergenic
GTGGTGGTCATGATGATTAC+TGG 0.404253 3_4:+58601309 Msa0509950:CDS
ACCTGTAAAGGCGGCACAGC+AGG 0.410044 3_4:-58600967 None:intergenic
CAAAGATGGAGCACTTTGTA+AGG 0.411359 3_4:-58601549 None:intergenic
GCAAATTCTTCTAATCCATA+TGG 0.411362 3_4:+58600382 Msa0509950:CDS
TGAGAAAGAGGCCACTGCTT+TGG 0.411832 3_4:+58610507 Msa0509950:CDS
AAAGAGCCTTTAACTGAGAT+TGG 0.414274 3_4:-58609286 None:intergenic
GCCACAGCATCTTCTGGCTC+TGG 0.417167 3_4:-58610910 None:intergenic
GCTGCGGATGCTGGTCATAC+TGG 0.421733 3_4:-58600243 None:intergenic
TTTATTGCAACCATGACATC+TGG 0.422025 3_4:+58600154 Msa0509950:exon
CAACAGAAGGGCTAGTGCTC+TGG 0.424865 3_4:+58607308 Msa0509950:CDS
TGCTGCTAATTCAATACTTA+AGG 0.425260 3_4:+58601745 Msa0509950:CDS
CTTCAGTGCTGCACTGGATG+TGG 0.425420 3_4:-58601666 None:intergenic
AAGCTAACCTGATTATATTC+AGG 0.427569 3_4:-58608086 None:intergenic
GTCAAATTTGAAGCAATTCG+AGG 0.427572 3_4:-58601611 None:intergenic
ATCAGCCACAATACAATCAA+TGG 0.427782 3_4:+58600758 Msa0509950:CDS
CTTAGCAAAAGCTTTGATAA+TGG 0.428213 3_4:+58607333 Msa0509950:CDS
ACCGGCTTCTCCTCTGGTAA+TGG 0.429110 3_4:-58605410 None:intergenic
AAAATATAAATTTGCAATGA+AGG 0.429184 3_4:-58598832 None:intergenic
TTACCATTCTTTCTTGGTAA+AGG 0.430009 3_4:+58611188 Msa0509950:three_prime_UTR
CCAGATTTGAGAATAGGTTC+TGG 0.434151 3_4:-58611068 None:intergenic
AACTCATGCCCGGTTGGCAC+TGG 0.434911 3_4:+58608049 Msa0509950:CDS
TTCACCTTGCCATTGATGAT+AGG 0.435816 3_4:-58609397 None:intergenic
GCAGGAGCAGGAGCAGGAAC+AGG 0.436399 3_4:-58600865 None:intergenic
GTTCGTGCAGCTGTAACTTC+AGG 0.440910 3_4:+58610210 Msa0509950:CDS
AACATAGCCACGCAAAGACT+TGG 0.445716 3_4:-58603114 None:intergenic
GACACAGGATGATGGTTAAC+CGG 0.448056 3_4:-58605491 None:intergenic
TTATTGTCTGCATCTGCCTC+CGG 0.449792 3_4:-58604545 None:intergenic
AGGAAGAGGGAAGTACAAAT+TGG 0.449984 3_4:-58601489 None:intergenic
TGGGATGCTCTTACTGTAAA+GGG 0.453003 3_4:+58607384 Msa0509950:CDS
GAAGCAATTCGAGGATTTGT+TGG 0.453082 3_4:-58601602 None:intergenic
CAAAGACTTGGGAAACATAC+CGG 0.453318 3_4:-58603102 None:intergenic
ATACTGTAAAATACAGTAGT+TGG 0.455481 3_4:+58605462 Msa0509950:CDS
ATACTGTAAAATACAGTAGT+TGG 0.455481 3_4:+58605525 Msa0509950:CDS
TGGCTATGTTGAAAGAGCTT+TGG 0.455514 3_4:+58603127 Msa0509950:CDS
AGGCGGCACAGCAGGAGTGC+TGG 0.456913 3_4:-58600959 None:intergenic
GGCTGAGAATAAGCAGGATT+AGG 0.457090 3_4:-58600457 None:intergenic
ATTGTTATCAGCAATTATAC+TGG 0.462204 3_4:-58610563 None:intergenic
CAGAAATTGTCGATTGAAGA+AGG 0.463195 3_4:-58599267 None:intergenic
GACACAGGATGATGGTCAAC+CGG 0.463264 3_4:-58605428 None:intergenic
ATAAGGCAGGTGTTTAAGTT+CGG 0.463914 3_4:-58610270 None:intergenic
TAAGCAAATGGCAGCATGCC+AGG 0.464128 3_4:+58603166 Msa0509950:CDS
CAGATTTGAGAATAGGTTCT+GGG 0.465177 3_4:-58611067 None:intergenic
CAACCCAAAGTAGATGAACT+TGG 0.465843 3_4:-58600841 None:intergenic
CAGAATACTGGGTCTAATGC+TGG 0.466623 3_4:+58600532 Msa0509950:CDS
AGCAGGCTTCAGTGCTGCAC+TGG 0.467043 3_4:-58601672 None:intergenic
TCCAGTAGCTCTTATAGTAC+TGG 0.469410 3_4:+58600712 Msa0509950:CDS
TGGTCAACCGGCTTCTCCTC+TGG 0.472769 3_4:-58605416 None:intergenic
ACCATCTTGAACGCTTCCTA+CGG 0.473101 3_4:-58600275 None:intergenic
ACCAGTACTATAAGAGCTAC+TGG 0.473490 3_4:-58600713 None:intergenic
TTTCCTCCTTTCAGAATACT+GGG 0.474082 3_4:+58600521 Msa0509950:CDS
GAATGGCATGCAGGTGGTAG+TGG 0.477039 3_4:+58606960 Msa0509950:intron
ACAGAGAGAAATATAGTGCT+TGG 0.477191 3_4:-58598886 None:intergenic
AAAATCATTAACAGCAAGGT+TGG 0.480465 3_4:-58610944 None:intergenic
CTGGGATGCTCTTACTGTAA+AGG 0.481316 3_4:+58607383 Msa0509950:CDS
TGTCCTTTACCAAGAAAGAA+TGG 0.483538 3_4:-58611191 None:intergenic
ACCTGAGATACGTAGGAAAC+GGG 0.485335 3_4:-58610442 None:intergenic
TATGCAGTAAAACGTTGAAA+GGG 0.486573 3_4:-58598940 None:intergenic
TACTGTAAAGGGTACCTGCC+AGG 0.488396 3_4:+58607395 Msa0509950:CDS
GCCTAATGAAAAGGATAGAA+AGG 0.490421 3_4:+58605550 Msa0509950:CDS
AAAACGTTGAAAGGGGTTGT+TGG 0.490933 3_4:-58598932 None:intergenic
AACCTGAGATACGTAGGAAA+CGG 0.491900 3_4:-58610443 None:intergenic
CCACTAGTAGCTGCAGGAGC+AGG 0.492394 3_4:-58600877 None:intergenic
ACTTTGGCAATACAGAATCA+TGG 0.492394 3_4:-58605349 None:intergenic
TGGGTCGTAATTTGAGAAGA+AGG 0.493609 3_4:-58598866 None:intergenic
CCGCAGCCGCAGCCGCCCGT+AGG 0.495074 3_4:+58600259 Msa0509950:CDS
TTAAAGGCTCTTTATGCTGA+AGG 0.495998 3_4:+58609296 Msa0509950:CDS
AAGGAGGAAATAGGCTGATA+AGG 0.496384 3_4:-58600508 None:intergenic
ACCCGTTTCCTACGTATCTC+AGG 0.496736 3_4:+58610441 Msa0509950:CDS
ACAGAAGTCAGTTGTGCCCC+AGG 0.496956 3_4:+58600799 Msa0509950:CDS
CCCGTGCTGCCATAACCATA+TGG 0.497830 3_4:-58600397 None:intergenic
CAAACCTACAGATACATTAA+GGG 0.498360 3_4:-58611003 None:intergenic
TGAAGCAAATGATGAGAAAG+AGG 0.498622 3_4:+58610495 Msa0509950:CDS
TTTATCAATACTAACCCATA+AGG 0.501651 3_4:-58610287 None:intergenic
TCTGTGGCGTAACTTGTATA+CGG 0.502129 3_4:-58600688 None:intergenic
GGACCTGCCTGAATATAATC+AGG 0.505112 3_4:+58608079 Msa0509950:CDS
CAGAGAGAAATATAGTGCTT+GGG 0.507664 3_4:-58598885 None:intergenic
ACGCTTCCTACGGGCGGCTG+CGG 0.508637 3_4:-58600265 None:intergenic
CCCAACTTCCAGTGCCAACC+GGG 0.510017 3_4:-58608057 None:intergenic
CAGAACCTATTCTCAAATCT+GGG 0.511748 3_4:+58611069 Msa0509950:three_prime_UTR
GTAGGAGCATATCAAAATAC+AGG 0.512154 3_4:+58600481 Msa0509950:CDS
TGAAGCTGTAAAACATGCTC+TGG 0.512592 3_4:+58610185 Msa0509950:CDS
TAGTTGGGTGCCTAATGAAA+AGG 0.512618 3_4:+58605541 Msa0509950:CDS
TTGTAAAGATGATAAGCAAA+TGG 0.513557 3_4:+58603154 Msa0509950:CDS
TACGTAGCAGAAATCGTTGA+AGG 0.515406 3_4:-58599326 None:intergenic
GTTATCTGACGAAGCAAAGA+AGG 0.515818 3_4:+58610161 Msa0509950:CDS
CCATATGGTTATGGCAGCAC+GGG 0.516635 3_4:+58600397 Msa0509950:CDS
GCAACCCTTAATGTATCTGT+AGG 0.517344 3_4:+58610999 Msa0509950:three_prime_UTR
GTAGCTGCAGGAGCAGGAGC+AGG 0.517946 3_4:-58600871 None:intergenic
TTAATTAAGTAATTAACAGA+AGG 0.521008 3_4:-58598986 None:intergenic
AAAGGAGATATTACGGTGGC+GGG 0.521108 3_4:-58607459 None:intergenic
ATCCCAATTACGTGTGCATA+GGG 0.522319 3_4:-58604501 None:intergenic
AGTGATATTCAAACCTGTAA+AGG 0.522822 3_4:-58600979 None:intergenic
TTAGATGATAGTTTCTCAGT+TGG 0.523740 3_4:-58601719 None:intergenic
CAGACAAGTTCTCTGTCCCT+GGG 0.524755 3_4:-58600816 None:intergenic
TCGTAATTTGAGAAGAAGGT+GGG 0.524937 3_4:-58598862 None:intergenic
TGCATCTAGTGATAGTGATA+AGG 0.526272 3_4:+58607122 Msa0509950:CDS
TACTTGTTGACACAGGATGA+TGG 0.527108 3_4:-58605499 None:intergenic
AATGAAACAGCAATATAAGC+AGG 0.527678 3_4:-58601689 None:intergenic
CCTGCATGTGCCGATCATAT+CGG 0.528944 3_4:+58610410 Msa0509950:CDS
CAAAGTGTATCATCAGTTGC+TGG 0.530028 3_4:+58600298 Msa0509950:CDS
CCATCTTGAACGCTTCCTAC+GGG 0.530099 3_4:-58600274 None:intergenic
CCACCACTATTTACTGCAGC+AGG 0.530413 3_4:-58601293 None:intergenic
GCTCTGAACGTTCCATGAAA+CGG 0.532106 3_4:-58600185 None:intergenic
CCAGAAGATGCTGTGGCCCA+CGG 0.533746 3_4:+58610916 Msa0509950:CDS
TCCTTTGCAGATGATCACTA+AGG 0.534413 3_4:+58604463 Msa0509950:intron
GACTCTTGCACCCAATATTG+TGG 0.535657 3_4:-58600937 None:intergenic
TACTTGTTGACACAGGATGA+TGG 0.536480 3_4:-58605436 None:intergenic
GCCATTACCAGAGGAGAAGC+CGG 0.537479 3_4:+58605409 Msa0509950:CDS
TACTGTAAAATACAGTAGTT+GGG 0.538465 3_4:+58605463 Msa0509950:CDS
TACTGTAAAATACAGTAGTT+GGG 0.538465 3_4:+58605526 Msa0509950:CDS
TTATGCAGTAAAACGTTGAA+AGG 0.540436 3_4:-58598941 None:intergenic
CAGAGAACTCCTATCATCAA+TGG 0.540998 3_4:+58609388 Msa0509950:CDS
ACGCAAATCAAGCGCCGGCA+TGG 0.541797 3_4:+58600632 Msa0509950:CDS
CCGATATGATCGGCACATGC+AGG 0.542062 3_4:-58610410 None:intergenic
GGCGCCAGATTCACCTGTTG+AGG 0.542468 3_4:-58601527 None:intergenic
TGCTTCTTAAATGGCCTTTG+GGG 0.542792 3_4:-58607060 None:intergenic
TATCCCAATTACGTGTGCAT+AGG 0.545696 3_4:-58604502 None:intergenic
TCAGCCACAATACAATCAAT+GGG 0.547636 3_4:+58600759 Msa0509950:CDS
GCGCCAGATTCACCTGTTGA+GGG 0.548174 3_4:-58601526 None:intergenic
TGCTGGTCATACTGGTAGGT+CGG 0.548260 3_4:-58600235 None:intergenic
ATACAGTAGTTGGGTGCCGC+CGG 0.548866 3_4:+58605472 Msa0509950:CDS
TCACCTCTTTCATGACAGCC+TGG 0.549405 3_4:-58603184 None:intergenic
CTGGAAACTTGTACAACAGA+AGG 0.551854 3_4:+58607295 Msa0509950:CDS
TGGTGTCAGCAAAGCTGTTG+AGG 0.553579 3_4:+58607353 Msa0509950:CDS
TGCATATTATTCTGCTGCAA+TGG 0.553825 3_4:+58607158 Msa0509950:CDS
CGGATGCTGGTCATACTGGT+AGG 0.555373 3_4:-58600239 None:intergenic
CCTGCTGATTATCAGACCAC+TGG 0.555735 3_4:+58600586 Msa0509950:CDS
TCCATATGGTTATGGCAGCA+CGG 0.557054 3_4:+58600396 Msa0509950:CDS
AAGCTGTTGAGGATATTGAC+TGG 0.559177 3_4:+58607364 Msa0509950:CDS
GCCAGATTCACCTGTTGAGG+GGG 0.559645 3_4:-58601524 None:intergenic
TGTGGAGGCTGGTAATTTGA+AGG 0.560594 3_4:-58600907 None:intergenic
AGAGCAAGGAAGACAGTTGG+AGG 0.560733 3_4:+58606992 Msa0509950:CDS
AAAAGGAGATATTACGGTGG+CGG 0.561173 3_4:-58607460 None:intergenic
CCTGCTCCTGCAGCTACTAG+TGG 0.561241 3_4:+58600877 Msa0509950:CDS
CCAGTGGTCTGATAATCAGC+AGG 0.561824 3_4:-58600586 None:intergenic
AAGAGAGCAAGGAAGACAGT+TGG 0.562299 3_4:+58606989 Msa0509950:CDS
TAACCTGATTATATTCAGGC+AGG 0.562357 3_4:-58608082 None:intergenic
CAAATCTGGGACTAGTGTCA+TGG 0.564251 3_4:+58611082 Msa0509950:three_prime_UTR
TAAAGGCTCTTTATGCTGAA+GGG 0.564963 3_4:+58609297 Msa0509950:CDS
GTGGATATGATTGTGGAGGC+TGG 0.565484 3_4:-58600918 None:intergenic
GCCTCCGGCATTGGGAAGAG+TGG 0.566459 3_4:-58604530 None:intergenic
TAATTAAGTAATTAACAGAA+GGG 0.567138 3_4:-58598985 None:intergenic
GTCCTAGACGATCTAAAAGT+AGG 0.569257 3_4:+58605381 Msa0509950:CDS
CAGCCTGCTGCAGTAAATAG+TGG 0.570492 3_4:+58601290 Msa0509950:intron
GGAACCACTCTTCCCAATGC+CGG 0.571157 3_4:+58604526 Msa0509950:CDS
CTTTGGAAGAGTGTTTAGAA+TGG 0.571807 3_4:+58610524 Msa0509950:CDS
GCATAACCACTAGTAGCTGC+AGG 0.571910 3_4:-58600883 None:intergenic
GTTCAGAGCTCCACAGCGAA+TGG 0.572983 3_4:+58600199 Msa0509950:CDS
CCTACAGGCTGAGAATAAGC+AGG 0.576409 3_4:-58600463 None:intergenic
CGGATACGCAAATCAAGCGC+CGG 0.577868 3_4:+58600627 Msa0509950:CDS
GCGATACCTGCGCCTAACAT+CGG 0.579158 3_4:+58607428 Msa0509950:CDS
CTGGCGCCGATGTTAGGCGC+AGG 0.581743 3_4:-58607434 None:intergenic
GGCTTCAGAACCAGATGTCA+TGG 0.581974 3_4:-58600164 None:intergenic
AGTATAATTGCTGATAACAA+TGG 0.582252 3_4:+58610565 Msa0509950:CDS
CGCCAGATTCACCTGTTGAG+GGG 0.582343 3_4:-58601525 None:intergenic
GTACGGTTGGCCGATATGAT+CGG 0.583535 3_4:-58610420 None:intergenic
ATGCCAGGCTGTCATGAAAG+AGG 0.584265 3_4:+58603181 Msa0509950:CDS
GTCGTAATTTGAGAAGAAGG+TGG 0.585323 3_4:-58598863 None:intergenic
CAATATTGTGGATATGATTG+TGG 0.585569 3_4:-58600925 None:intergenic
AGGTATATGAAACTCATGCC+CGG 0.586101 3_4:+58608039 Msa0509950:intron
GCAATAAAGATGTCTGATGT+CGG 0.586640 3_4:-58600139 None:intergenic
AGCAAGGTTGGCATCTCCGT+GGG 0.587369 3_4:-58610932 None:intergenic
ACATAGCCACGCAAAGACTT+GGG 0.587714 3_4:-58603113 None:intergenic
AACTCCTATCATCAATGGCA+AGG 0.587936 3_4:+58609393 Msa0509950:CDS
AAAGACTTGGGAAACATACC+GGG 0.594352 3_4:-58603101 None:intergenic
TAACTGTCATTGTTCCATGC+CGG 0.594398 3_4:-58600646 None:intergenic
TCAATACTAACCCATAAGGC+AGG 0.596141 3_4:-58610283 None:intergenic
AGTGGAAAACAAAGAGAGCA+AGG 0.597172 3_4:+58606978 Msa0509950:CDS
CCTGCTTATTCTCAGCCTGT+AGG 0.600180 3_4:+58600463 Msa0509950:CDS
CTAGACGATCTAAAAGTAGG+TGG 0.601709 3_4:+58605384 Msa0509950:CDS
ATTCTTAAATCTGCAAACAA+CGG 0.602162 3_4:+58599292 Msa0509950:five_prime_UTR
CTTTATGCTGAAGGGATCGA+AGG 0.603964 3_4:+58609305 Msa0509950:CDS
ATATGAAACTCATGCCCGGT+TGG 0.604591 3_4:+58608043 Msa0509950:CDS
ATGCAGTAAAACGTTGAAAG+GGG 0.609817 3_4:-58598939 None:intergenic
GAACAGAAAATAATCACTCA+AGG 0.611292 3_4:+58607256 Msa0509950:CDS
TCCGCCCATTGATTGTATTG+TGG 0.611868 3_4:-58600763 None:intergenic
CGTAATTTGAGAAGAAGGTG+GGG 0.614238 3_4:-58598861 None:intergenic
CTCTGGCACAAATAAACTAG+AGG 0.614360 3_4:-58610893 None:intergenic
AACCCAAAGTAGATGAACTT+GGG 0.614812 3_4:-58600840 None:intergenic
ATGTTTCCCAAGTCTTTGCG+TGG 0.615774 3_4:+58603107 Msa0509950:CDS
TTAGAATGGTTGAAAGCTCA+TGG 0.616091 3_4:+58610538 Msa0509950:CDS
CAGAAGACAGTATCTTCTCA+AGG 0.616801 3_4:+58601464 Msa0509950:CDS
CATGATGATTACTGGAAACA+TGG 0.617331 3_4:+58601317 Msa0509950:CDS
TAGATTAGGGTTCTTCGATG+CGG 0.618633 3_4:-58599229 None:intergenic
TAATGGTTCAAAATTCCCAA+AGG 0.619992 3_4:+58607605 Msa0509950:CDS
ACACAACCAATTAACAGTCA+AGG 0.621344 3_4:+58607690 Msa0509950:CDS
GCTGATTATCAGACCACTGG+AGG 0.623549 3_4:+58600589 Msa0509950:CDS
ATAAGTGCTTGAATAACTTG+CGG 0.624859 3_4:-58600557 None:intergenic
ATAAGAGCTACTGGAATCTG+TGG 0.625635 3_4:-58600704 None:intergenic
CCGGTTGGCACTGGAAGTTG+GGG 0.625846 3_4:+58608058 Msa0509950:CDS
CCCGTAGGAAGCGTTCAAGA+TGG 0.628957 3_4:+58600274 Msa0509950:CDS
GCGTATGCATTATAATCTTG+TGG 0.629965 3_4:-58600352 None:intergenic
AGATACGTAGGAAACGGGTA+CGG 0.629992 3_4:-58610437 None:intergenic
AAAGATGGAGCACTTTGTAA+GGG 0.633740 3_4:-58601548 None:intergenic
ACGTAGGAAACGGGTACGGT+TGG 0.636510 3_4:-58610433 None:intergenic
AGAATAAATTCCATTCGCTG+TGG 0.636759 3_4:-58600209 None:intergenic
TGATAACAATGGAGACATGA+TGG 0.639004 3_4:+58610576 Msa0509950:CDS
AGACCCAGTATTCTGAAAGG+AGG 0.639972 3_4:-58600524 None:intergenic
TAGACGATCTAAAAGTAGGT+GGG 0.640865 3_4:+58605385 Msa0509950:CDS
TAAACACTCTTCCAAAGCAG+TGG 0.643140 3_4:-58610518 None:intergenic
TGGAAACTTGTACAACAGAA+GGG 0.643768 3_4:+58607296 Msa0509950:CDS
CAGCAAGGTTGGCATCTCCG+TGG 0.644377 3_4:-58610933 None:intergenic
GGGGTTGTTGGCGAAAACGA+TGG 0.646102 3_4:-58598920 None:intergenic
CAGAAGTCAGTTGTGCCCCA+GGG 0.647530 3_4:+58600800 Msa0509950:CDS
ATTAGACCCAGTATTCTGAA+AGG 0.648423 3_4:-58600527 None:intergenic
GCCAGAGCCAGAAGATGCTG+TGG 0.649747 3_4:+58610909 Msa0509950:CDS
AGCTGTTGAGGATATTGACT+GGG 0.653712 3_4:+58607365 Msa0509950:CDS
GTATCATTACTTGTTGACAC+AGG 0.654941 3_4:-58605443 None:intergenic
GTATCATTACTTGTTGACAC+AGG 0.654941 3_4:-58605506 None:intergenic
ACCACTCTTCCCAATGCCGG+AGG 0.658673 3_4:+58604529 Msa0509950:CDS
GATATTCAAACCTGTAAAGG+CGG 0.659423 3_4:-58600976 None:intergenic
TATCGAGTAAAGCTCCCCAA+AGG 0.663783 3_4:+58607046 Msa0509950:CDS
GTAACTTGTATACGGATGAG+AGG 0.666117 3_4:-58600680 None:intergenic
GGAGGTTACCAAAACAGCAA+CGG 0.667976 3_4:+58600607 Msa0509950:CDS
TAGGTGGGAGCCATTACCAG+AGG 0.672885 3_4:+58605400 Msa0509950:CDS
TCCTAGAACCTGAGATACGT+AGG 0.679539 3_4:-58610449 None:intergenic
TGATTATCAAAGGTCATACA+CGG 0.680744 3_4:-58611148 None:intergenic
CCTGCTGCAGTAAATAGTGG+TGG 0.681233 3_4:+58601293 Msa0509950:CDS
ACAGGATGATGGTTAACCGG+CGG 0.700654 3_4:-58605488 None:intergenic
GCCACAATACAATCAATGGG+CGG 0.709329 3_4:+58600762 Msa0509950:CDS
AGACAAGTTCTCTGTCCCTG+GGG 0.709687 3_4:-58600815 None:intergenic
TCTTGAACGCTTCCTACGGG+CGG 0.710978 3_4:-58600271 None:intergenic
TATTGTGGATATGATTGTGG+AGG 0.718936 3_4:-58600922 None:intergenic
GTATTGTGGCTGATACTGCA+CGG 0.734393 3_4:-58600749 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTATCTTTTAGTATAT+TGG + chr3_4:58601150-58601169 Msa0509950:intron 10.0%
!! TAAATAAAAAATAAATGAAC+TGG - chr3_4:58601841-58601860 None:intergenic 10.0%
!!! AAAAAAAAGTTTTATAAACA+AGG - chr3_4:58602264-58602283 None:intergenic 10.0%
!! AATGAAAACAATAATATATT+TGG + chr3_4:58603923-58603942 Msa0509950:intron 10.0%
!! ATGAAAACAATAATATATTT+GGG + chr3_4:58603924-58603943 Msa0509950:intron 10.0%
!! TCAATTAATATTTGTAAAAA+AGG + chr3_4:58604937-58604956 Msa0509950:intron 10.0%
!! AAAACTATAATAAAAATTCA+AGG - chr3_4:58605178-58605197 None:intergenic 10.0%
!! AAAACTTATAATTAATTTAG+GGG + chr3_4:58606594-58606613 Msa0509950:intron 10.0%
!! TATTGTCAAATAAAATTTAA+AGG - chr3_4:58609674-58609693 None:intergenic 10.0%
!! TACTAATAATAATAATTTCA+AGG - chr3_4:58609844-58609863 None:intergenic 10.0%
!! ATAATTAAATACTATGTAAA+AGG + chr3_4:58611109-58611128 Msa0509950:three_prime_UTR 10.0%
!! AAAATATAAATTTGCAATGA+AGG - chr3_4:58598835-58598854 None:intergenic 15.0%
!! TAATTAAGTAATTAACAGAA+GGG - chr3_4:58598988-58599007 None:intergenic 15.0%
!! TTAATTAAGTAATTAACAGA+AGG - chr3_4:58598989-58599008 None:intergenic 15.0%
!!! GGTTTTATAATTTATTTGAT+CGG - chr3_4:58599759-58599778 None:intergenic 15.0%
!! TAATAAGTAGATAGAAATTA+AGG + chr3_4:58601928-58601947 Msa0509950:intron 15.0%
!!! TTGTTATTTTTAGTGAAAAT+AGG + chr3_4:58602042-58602061 Msa0509950:intron 15.0%
!!! AATAATATAGGACATTATTT+TGG + chr3_4:58602321-58602340 Msa0509950:intron 15.0%
!!! TTGAATCTTGAATTATTTTA+TGG + chr3_4:58602778-58602797 Msa0509950:intron 15.0%
!!! TTTAAACTGTAATCAATTTT+TGG - chr3_4:58603010-58603029 None:intergenic 15.0%
!! AGATACAGTAAAAAAAATAT+AGG - chr3_4:58603758-58603777 None:intergenic 15.0%
!! GTAAACTAATATACTAAATT+AGG - chr3_4:58604332-58604351 None:intergenic 15.0%
!!! AATTTAGTATATTAGTTTAC+AGG + chr3_4:58604332-58604351 Msa0509950:intron 15.0%
!!! AAAAGAAAGCATAAAAAAAA+AGG - chr3_4:58606137-58606156 None:intergenic 15.0%
!!! AATACATAAACTATTTTCTT+TGG + chr3_4:58606169-58606188 Msa0509950:intron 15.0%
!! ACATAATAAGCATTTATTTA+GGG - chr3_4:58606251-58606270 None:intergenic 15.0%
!! AACATAATAAGCATTTATTT+AGG - chr3_4:58606252-58606271 None:intergenic 15.0%
!! AATAACACTTATGTTAATTT+AGG + chr3_4:58606676-58606695 Msa0509950:intron 15.0%
!! ATAACACTTATGTTAATTTA+GGG + chr3_4:58606677-58606696 Msa0509950:intron 15.0%
!!! AAAAAAAGTATCCATATTAA+GGG - chr3_4:58606802-58606821 None:intergenic 15.0%
!!! AAAAAAAAGTATCCATATTA+AGG - chr3_4:58606803-58606822 None:intergenic 15.0%
!! AATAAATGAAGTAAAAGAAA+GGG - chr3_4:58607851-58607870 None:intergenic 15.0%
!! AAATAAATGAAGTAAAAGAA+AGG - chr3_4:58607852-58607871 None:intergenic 15.0%
!! AATTATTAACGAATGTTTAT+GGG - chr3_4:58609569-58609588 None:intergenic 15.0%
!! AAATTATTAACGAATGTTTA+TGG - chr3_4:58609570-58609589 None:intergenic 15.0%
!! TATATTTATCAAGCAAATAA+AGG + chr3_4:58609599-58609618 Msa0509950:intron 15.0%
!! TATTATTATTAGTAGAAAAC+TGG + chr3_4:58609850-58609869 Msa0509950:intron 15.0%
!!! AAATTTATTGCAATTTTGTT+TGG + chr3_4:58609881-58609900 Msa0509950:intron 15.0%
!!! AATTTATTGCAATTTTGTTT+GGG + chr3_4:58609882-58609901 Msa0509950:intron 15.0%
!! GGTAAATTCTAAATTAATAT+GGG - chr3_4:58610771-58610790 None:intergenic 15.0%
!! AGGTAAATTCTAAATTAATA+TGG - chr3_4:58610772-58610791 None:intergenic 15.0%
!! AAAAAACAAATGATTATCAA+AGG - chr3_4:58611161-58611180 None:intergenic 15.0%
!!! TTTGATAATCATTTGTTTTT+TGG + chr3_4:58611160-58611179 Msa0509950:three_prime_UTR 15.0%
!!! TTGATAATCATTTGTTTTTT+GGG + chr3_4:58611161-58611180 Msa0509950:three_prime_UTR 15.0%
!!! TTTTTTTCGACGAATTATTA+GGG + chr3_4:58599153-58599172 Msa0509950:five_prime_UTR 20.0%
!!! GATATTTTTGGAGATATTTT+AGG - chr3_4:58599812-58599831 None:intergenic 20.0%
!! TATCTCCAAAAATATCTATT+TGG + chr3_4:58599816-58599835 Msa0509950:intron 20.0%
!!! ACATACCAAATAGATATTTT+TGG - chr3_4:58599824-58599843 None:intergenic 20.0%
!! TCATACCAAATAGATATTTA+CGG - chr3_4:58599878-58599897 None:intergenic 20.0%
!!! TTTTGTCTTTTTTACAGAAT+CGG + chr3_4:58600102-58600121 Msa0509950:intron 20.0%
!! TTCTTCTTATGATAAATTTC+AGG + chr3_4:58601433-58601452 Msa0509950:CDS 20.0%
!! TAGTTTATAAAACTTAGCTA+TGG + chr3_4:58602294-58602313 Msa0509950:intron 20.0%
!!! AATTAACAGAAGTTGTTTTT+TGG + chr3_4:58602454-58602473 Msa0509950:intron 20.0%
!! GTTATAAATCAAAGAACAAA+AGG - chr3_4:58602758-58602777 None:intergenic 20.0%
!! TCATTATTCAAAGCATAAAA+AGG - chr3_4:58603304-58603323 None:intergenic 20.0%
!!! TTTCTATGTTTTTATAACCT+TGG + chr3_4:58603392-58603411 Msa0509950:intron 20.0%
!!! TTCTATGTTTTTATAACCTT+GGG + chr3_4:58603393-58603412 Msa0509950:intron 20.0%
!! ACATATAAATACGTAGAAAT+AGG + chr3_4:58603651-58603670 Msa0509950:intron 20.0%
!!! AATGTCAAATTATAGTTTTC+AGG - chr3_4:58604257-58604276 None:intergenic 20.0%
!! TGAAAACTATAATTTGACAT+TGG + chr3_4:58604256-58604275 Msa0509950:intron 20.0%
!!! ATATATTTTTATTTGCTCTC+TGG + chr3_4:58604280-58604299 Msa0509950:intron 20.0%
!! GAATCAAAACTATTTCATAT+TGG - chr3_4:58604760-58604779 None:intergenic 20.0%
!! TATTAATTGACATCAGTTAA+AGG - chr3_4:58604927-58604946 None:intergenic 20.0%
!!! ATAAAAAGTGAACTTGTTAA+CGG - chr3_4:58605665-58605684 None:intergenic 20.0%
!!! TTCTTTTTATGGGTTATATT+TGG + chr3_4:58605734-58605753 Msa0509950:intron 20.0%
!!! TTTACTATTCCTCTAAAAAA+AGG + chr3_4:58605779-58605798 Msa0509950:intron 20.0%
!!! AGTAAATATCCTTTTTTTAG+AGG - chr3_4:58605791-58605810 None:intergenic 20.0%
!! TTGTCAAAATTACACAAAAA+TGG - chr3_4:58606025-58606044 None:intergenic 20.0%
!!! TTTGTGTAATTTTGACAAAT+AGG + chr3_4:58606027-58606046 Msa0509950:intron 20.0%
!! CATAATAAGCATTTATTTAG+GGG - chr3_4:58606250-58606269 None:intergenic 20.0%
!! TAACACTTATGTTAATTTAG+GGG + chr3_4:58606678-58606697 Msa0509950:intron 20.0%
!! TACATTTGCCATTAAAAAAA+GGG - chr3_4:58606765-58606784 None:intergenic 20.0%
!! TTACATTTGCCATTAAAAAA+AGG - chr3_4:58606766-58606785 None:intergenic 20.0%
!! TTTATTGAGATTAGTAGTAA+AGG - chr3_4:58607534-58607553 None:intergenic 20.0%
!! TTTATAAAGGTAATTCCTTT+GGG - chr3_4:58607623-58607642 None:intergenic 20.0%
!! ATTTATAAAGGTAATTCCTT+TGG - chr3_4:58607624-58607643 None:intergenic 20.0%
!! TTCATAATATTTCTCAGTAA+TGG + chr3_4:58607762-58607781 Msa0509950:intron 20.0%
!! ATAAATGAAGTAAAAGAAAG+GGG - chr3_4:58607850-58607869 None:intergenic 20.0%
!! TTATTTGACTATATCTCAAA+TGG + chr3_4:58607866-58607885 Msa0509950:intron 20.0%
!! AAAACAAACCCTAATTAATT+AGG + chr3_4:58608783-58608802 Msa0509950:intron 20.0%
!! AAACAAACCCTAATTAATTA+GGG + chr3_4:58608784-58608803 Msa0509950:intron 20.0%
!! CTGATTTATTGAAAATTCTT+TGG + chr3_4:58609776-58609795 Msa0509950:intron 20.0%
!! ACAACATTAGATACAAAAAT+TGG - chr3_4:58610132-58610151 None:intergenic 20.0%
!! AGCTATATCTATCAAAATAT+GGG - chr3_4:58610807-58610826 None:intergenic 20.0%
!! TAGCTATATCTATCAAAATA+TGG - chr3_4:58610808-58610827 None:intergenic 20.0%
!!! TTTTGATAGATATAGCTAAT+AGG + chr3_4:58610810-58610829 Msa0509950:intron 20.0%
!!! TGTTAATGATTTTTTAGCAA+AGG + chr3_4:58610954-58610973 Msa0509950:CDS 20.0%
!! TGTAAAAGGAAAATAGAAAA+TGG + chr3_4:58611123-58611142 Msa0509950:three_prime_UTR 20.0%
!!! TGATAATCATTTGTTTTTTG+GGG + chr3_4:58611162-58611181 Msa0509950:three_prime_UTR 20.0%
!!! ATAGTTTTTTCGTACTTCAA+AGG + chr3_4:58599109-58599128 Msa0509950:five_prime_UTR 25.0%
!!! GTTTTTTTCGACGAATTATT+AGG + chr3_4:58599152-58599171 Msa0509950:five_prime_UTR 25.0%
! ATTCTTAAATCTGCAAACAA+CGG + chr3_4:58599292-58599311 Msa0509950:five_prime_UTR 25.0%
!!! GTTTTTCTCTGATTGATTTA+TGG + chr3_4:58599440-58599459 Msa0509950:intron 25.0%
! AATACACTTGAAAAACGTTA+TGG + chr3_4:58599658-58599677 Msa0509950:intron 25.0%
! ATCTAATCAATATACACTGA+CGG + chr3_4:58599710-58599729 Msa0509950:intron 25.0%
!!! TTTTAGGAACTAAACTAGAA+AGG - chr3_4:58599796-58599815 None:intergenic 25.0%
! TTCGATTAAATTTCATAACG+CGG + chr3_4:58599960-58599979 Msa0509950:intron 25.0%
! TAAAGCTATTGTTTCAATAG+TGG + chr3_4:58600010-58600029 Msa0509950:intron 25.0%
! AAAGCTATTGTTTCAATAGT+GGG + chr3_4:58600011-58600030 Msa0509950:intron 25.0%
! ACAATCATATCCACAATATT+GGG + chr3_4:58600927-58600946 Msa0509950:CDS 25.0%
! AAATCAACAGTTGAATAGTT+TGG + chr3_4:58601016-58601035 Msa0509950:intron 25.0%
! AAATCATAACCAAAGCAATT+TGG - chr3_4:58601076-58601095 None:intergenic 25.0%
!!! AACTTCATGTTTGTTTCTTT+TGG + chr3_4:58601263-58601282 Msa0509950:intron 25.0%
!! ATGAATTTGAGAACTAGTTT+GGG - chr3_4:58601345-58601364 None:intergenic 25.0%
!! TCTGATACAAATTTTCGTAA+CGG + chr3_4:58601992-58602011 Msa0509950:intron 25.0%
!!! AATGCATAGTTTAGTTTTGT+TGG - chr3_4:58602181-58602200 None:intergenic 25.0%
! ACAAAACTAAACTATGCATT+CGG + chr3_4:58602181-58602200 Msa0509950:intron 25.0%
!!! ATAGCTATTAGTCTTTTTAG+GGG - chr3_4:58602218-58602237 None:intergenic 25.0%
!!! CATAGCTATTAGTCTTTTTA+GGG - chr3_4:58602219-58602238 None:intergenic 25.0%
! AGCTATGGCTAAAATAATAT+AGG + chr3_4:58602309-58602328 Msa0509950:intron 25.0%
! ACTTCTGTTAATTCAAAAGT+AGG - chr3_4:58602447-58602466 None:intergenic 25.0%
! GGAATACATCATAATGAATA+AGG - chr3_4:58602640-58602659 None:intergenic 25.0%
! TTACAGTTTGAATCTTGATT+TGG + chr3_4:58602874-58602893 Msa0509950:intron 25.0%
! TTGTAAGATACATAAACTAC+CGG - chr3_4:58602961-58602980 None:intergenic 25.0%
! TTGTAAAGATGATAAGCAAA+TGG + chr3_4:58603154-58603173 Msa0509950:CDS 25.0%
! TGCAACTTATACAATTACAA+CGG - chr3_4:58603543-58603562 None:intergenic 25.0%
! TTAAGAATCAGACACATAAA+GGG - chr3_4:58603887-58603906 None:intergenic 25.0%
! ATTAAGAATCAGACACATAA+AGG - chr3_4:58603888-58603907 None:intergenic 25.0%
! ATAAGATTATGCAAATAACC+TGG - chr3_4:58604430-58604449 None:intergenic 25.0%
! ATTGATCAAATCTTGAAGAT+CGG - chr3_4:58604658-58604677 None:intergenic 25.0%
!!! TAGTTTTGATTCAATTCAGA+CGG + chr3_4:58604768-58604787 Msa0509950:intron 25.0%
! TATCTCTGTAATAGAAACAA+AGG - chr3_4:58604808-58604827 None:intergenic 25.0%
!! TTTTACATACCATACTCTTT+GGG - chr3_4:58604845-58604864 None:intergenic 25.0%
!! ATTTTACATACCATACTCTT+TGG - chr3_4:58604846-58604865 None:intergenic 25.0%
! ATGGTATGTAAAATCTATAG+TGG + chr3_4:58604852-58604871 Msa0509950:intron 25.0%
!! ATTTAGCTTAAATGGTAGAA+GGG - chr3_4:58605059-58605078 None:intergenic 25.0%
! TAGGTAGTCATAAAATAGTT+GGG - chr3_4:58605099-58605118 None:intergenic 25.0%
! TTCATACTAATCTTATACCA+TGG + chr3_4:58605226-58605245 Msa0509950:intron 25.0%
! ATACTGTAAAATACAGTAGT+TGG + chr3_4:58605462-58605481 Msa0509950:CDS 25.0%
! TACTGTAAAATACAGTAGTT+GGG + chr3_4:58605463-58605482 Msa0509950:CDS 25.0%
! ATACTGTAAAATACAGTAGT+TGG + chr3_4:58605462-58605481 Msa0509950:CDS 25.0%
! TACTGTAAAATACAGTAGTT+GGG + chr3_4:58605463-58605482 Msa0509950:CDS 25.0%
!!! TTATTTTTCCCCTCAATATT+TGG + chr3_4:58605681-58605700 Msa0509950:intron 25.0%
!!! TCATGCTGTTTTCTTTTTAT+GGG + chr3_4:58605724-58605743 Msa0509950:intron 25.0%
!! GCATATCATTTTACCAAAAT+GGG - chr3_4:58605845-58605864 None:intergenic 25.0%
!! TGCATATCATTTTACCAAAA+TGG - chr3_4:58605846-58605865 None:intergenic 25.0%
!! TATACAAGATGGATTTAAGA+AGG - chr3_4:58606069-58606088 None:intergenic 25.0%
! AAACTGCTAAATATACAAGA+TGG - chr3_4:58606080-58606099 None:intergenic 25.0%
!! TTGTATATTTAGCAGTTTTG+TGG + chr3_4:58606082-58606101 Msa0509950:intron 25.0%
! GCATAATAATTGTTCTATGT+TGG + chr3_4:58606312-58606331 Msa0509950:intron 25.0%
!! ATCATTAATTATAGTGGAAG+TGG + chr3_4:58606716-58606735 Msa0509950:intron 25.0%
! ACATTTGCCATTAAAAAAAG+GGG - chr3_4:58606764-58606783 None:intergenic 25.0%
!! TATATTTGAGACCCTTAATA+TGG + chr3_4:58606788-58606807 Msa0509950:intron 25.0%
! GTTTAATTCACCTAAATGAA+TGG + chr3_4:58606943-58606962 Msa0509950:intron 25.0%
! ACTCTTAAAAGGAGATATTA+CGG - chr3_4:58607469-58607488 None:intergenic 25.0%
!!! TCTCCTTTTAAGAGTTTAAA+TGG + chr3_4:58607474-58607493 Msa0509950:intron 25.0%
! ATAAAATGTTGTGAACTTAC+AGG + chr3_4:58607549-58607568 Msa0509950:intron 25.0%
!!! TCTTGAAAAAGCACTATTAA+TGG + chr3_4:58607588-58607607 Msa0509950:CDS 25.0%
! TTAACTGGTCACATTTATAA+AGG - chr3_4:58607636-58607655 None:intergenic 25.0%
! ACTTTAATAGCTCTTCTATA+TGG - chr3_4:58607815-58607834 None:intergenic 25.0%
! ACTATATCTCAAATGGAAAT+TGG + chr3_4:58607873-58607892 Msa0509950:intron 25.0%
!!! AAATGGAAATTGGTTTTTGA+CGG + chr3_4:58607883-58607902 Msa0509950:intron 25.0%
!!! CATCTTTTGATTACATGAAT+CGG + chr3_4:58607915-58607934 Msa0509950:intron 25.0%
!!! TAGCTTTGATTACTTTTTAC+TGG + chr3_4:58608103-58608122 Msa0509950:intron 25.0%
! TCTTGAAGTCTATTGAATAA+TGG + chr3_4:58608217-58608236 Msa0509950:intron 25.0%
! CTTGAAGTCTATTGAATAAT+GGG + chr3_4:58608218-58608237 Msa0509950:intron 25.0%
! TTGAAGTCTATTGAATAATG+GGG + chr3_4:58608219-58608238 Msa0509950:intron 25.0%
!!! TGCAATTTTGTATTTCAAGT+AGG - chr3_4:58608362-58608381 None:intergenic 25.0%
! ATTGAATATAAATAAGGGAG+AGG + chr3_4:58608585-58608604 Msa0509950:intron 25.0%
!!! CAACTAGGTTTTAAGTTTTA+GGG - chr3_4:58608855-58608874 None:intergenic 25.0%
! CTGAAAATCCATTGTAAAAT+TGG - chr3_4:58609044-58609063 None:intergenic 25.0%
!!! TTTACAATGGATTTTCAGTA+TGG + chr3_4:58609046-58609065 Msa0509950:intron 25.0%
! TCAAATCATTAACAAGATCT+AGG + chr3_4:58609158-58609177 Msa0509950:intron 25.0%
! AATACGTAAGCATTTAAACA+CGG - chr3_4:58609425-58609444 None:intergenic 25.0%
! TATTATTAGTAGAAAACTGG+TGG + chr3_4:58609853-58609872 Msa0509950:intron 25.0%
!! AACGTAACTAAGTCTTTTAA+TGG + chr3_4:58610019-58610038 Msa0509950:intron 25.0%
! GACGATTAATACATTAACTT+AGG - chr3_4:58610065-58610084 None:intergenic 25.0%
! CATAATAACTGATAGTACAA+AGG - chr3_4:58610098-58610117 None:intergenic 25.0%
! TGTACTATCAGTTATTATGT+TGG + chr3_4:58610099-58610118 Msa0509950:intron 25.0%
! ACATTAGATACAAAAATTGG+AGG - chr3_4:58610129-58610148 None:intergenic 25.0%
! TATCTAATGTTGTCTATGAT+AGG + chr3_4:58610139-58610158 Msa0509950:intron 25.0%
! TTTATCAATACTAACCCATA+AGG - chr3_4:58610290-58610309 None:intergenic 25.0%
! ATTGTTATCAGCAATTATAC+TGG - chr3_4:58610566-58610585 None:intergenic 25.0%
! AGTATAATTGCTGATAACAA+TGG + chr3_4:58610565-58610584 Msa0509950:CDS 25.0%
!! TTCATTGAATGCTGAATTTT+TGG + chr3_4:58610651-58610670 Msa0509950:intron 25.0%
! CTAAAAAATCATTAACAGCA+AGG - chr3_4:58610951-58610970 None:intergenic 25.0%
! ATTGTAGTCAGAATAGAAAA+AGG + chr3_4:58611030-58611049 Msa0509950:three_prime_UTR 25.0%
TATGCAGTAAAACGTTGAAA+GGG - chr3_4:58598943-58598962 None:intergenic 30.0%
TTATGCAGTAAAACGTTGAA+AGG - chr3_4:58598944-58598963 None:intergenic 30.0%
AAGAAGAAGAAGAAAAACAC+GGG - chr3_4:58599040-58599059 None:intergenic 30.0%
GAAGAAGAAGAAGAAAAACA+CGG - chr3_4:58599041-58599060 None:intergenic 30.0%
GAGAAGCAGAAAAATCTTAT+TGG - chr3_4:58599074-58599093 None:intergenic 30.0%
AATTCGTCGAAAAAAACGAA+TGG - chr3_4:58599149-58599168 None:intergenic 30.0%
!! TCATTTTTCGAAGGTAACAT+TGG + chr3_4:58599350-58599369 Msa0509950:intron 30.0%
CTTGTGAATTGACAAAATAG+TGG + chr3_4:58599538-58599557 Msa0509950:intron 30.0%
TCACACCGTAAATATCTATT+TGG + chr3_4:58599870-58599889 Msa0509950:intron 30.0%
GATTACTTTCTATGCAATGA+CGG - chr3_4:58599932-58599951 None:intergenic 30.0%
AAAAGACAAAAATGCGATGT+CGG - chr3_4:58600093-58600112 None:intergenic 30.0%
TGCTGGTAATTCATCAAATT+TGG + chr3_4:58600315-58600334 Msa0509950:CDS 30.0%
GCTGGTAATTCATCAAATTT+GGG + chr3_4:58600316-58600335 Msa0509950:CDS 30.0%
GCAAATTCTTCTAATCCATA+TGG + chr3_4:58600382-58600401 Msa0509950:CDS 30.0%
TCTTCTAATCCATATGGTTA+TGG + chr3_4:58600388-58600407 Msa0509950:CDS 30.0%
ATAAGTGCTTGAATAACTTG+CGG - chr3_4:58600560-58600579 None:intergenic 30.0%
CAATATTGTGGATATGATTG+TGG - chr3_4:58600928-58600947 None:intergenic 30.0%
CACAATCATATCCACAATAT+TGG + chr3_4:58600926-58600945 Msa0509950:CDS 30.0%
AGTGATATTCAAACCTGTAA+AGG - chr3_4:58600982-58601001 None:intergenic 30.0%
TGAATATCACTGACAAAGTT+TGG + chr3_4:58600991-58601010 Msa0509950:intron 30.0%
AGCAATTTGGCATGAATAAA+TGG - chr3_4:58601063-58601082 None:intergenic 30.0%
TTATTCATGCCAAATTGCTT+TGG + chr3_4:58601064-58601083 Msa0509950:intron 30.0%
TCTAATCATTGATGCTTCAA+TGG + chr3_4:58601176-58601195 Msa0509950:intron 30.0%
!! TTCATGTTTGTTTCTTTTGG+TGG + chr3_4:58601266-58601285 Msa0509950:intron 30.0%
GATGAATTTGAGAACTAGTT+TGG - chr3_4:58601346-58601365 None:intergenic 30.0%
!! TTGGTTGAATAGGATTAGTT+TGG - chr3_4:58601388-58601407 None:intergenic 30.0%
! CTTTGATAGTTTGGTTGAAT+AGG - chr3_4:58601398-58601417 None:intergenic 30.0%
ACCAAACTATCAAAGTCATT+TGG + chr3_4:58601403-58601422 Msa0509950:CDS 30.0%
! TCCAAATGACTTTGATAGTT+TGG - chr3_4:58601407-58601426 None:intergenic 30.0%
AATGAAACAGCAATATAAGC+AGG - chr3_4:58601692-58601711 None:intergenic 30.0%
TTAGATGATAGTTTCTCAGT+TGG - chr3_4:58601722-58601741 None:intergenic 30.0%
TGCTGCTAATTCAATACTTA+AGG + chr3_4:58601745-58601764 Msa0509950:CDS 30.0%
ACGAAAATTTGTATCAGAGA+TGG - chr3_4:58601990-58602009 None:intergenic 30.0%
ACGGAAATGAAAGCAAAATA+TGG + chr3_4:58602011-58602030 Msa0509950:intron 30.0%
AGTGAAAATAGGAATAAGAC+CGG + chr3_4:58602053-58602072 Msa0509950:intron 30.0%
! CGATTCAAGAAAAGATTTTC+CGG - chr3_4:58602075-58602094 None:intergenic 30.0%
!!! TAGCTATTAGTCTTTTTAGG+GGG - chr3_4:58602217-58602236 None:intergenic 30.0%
!!! GCATAGCTATTAGTCTTTTT+AGG - chr3_4:58602220-58602239 None:intergenic 30.0%
TAAACAAGGCAATATTTAGC+AGG - chr3_4:58602250-58602269 None:intergenic 30.0%
!! TTTGGAACTTTTGTATGTAG+AGG + chr3_4:58602383-58602402 Msa0509950:intron 30.0%
ATATTGCAACCAAATTGTGA+TGG + chr3_4:58602512-58602531 Msa0509950:intron 30.0%
TGCATAAAACCATCACAATT+TGG - chr3_4:58602524-58602543 None:intergenic 30.0%
!!! AATTGTGATGGTTTTATGCA+TGG + chr3_4:58602524-58602543 Msa0509950:intron 30.0%
! CATAACGGTTCATATTGATT+GGG - chr3_4:58602599-58602618 None:intergenic 30.0%
TAAGGTTTCATACCCAAAAT+AGG - chr3_4:58602622-58602641 None:intergenic 30.0%
AAGAACAAAAGGAAAGTGAT+TGG - chr3_4:58602747-58602766 None:intergenic 30.0%
TGTAAGATACATAAACTACC+GGG - chr3_4:58602960-58602979 None:intergenic 30.0%
TCTAGCAAAATCATGAAGAA+CGG - chr3_4:58603271-58603290 None:intergenic 30.0%
AATAATGACCAACGATACTT+TGG + chr3_4:58603316-58603335 Msa0509950:intron 30.0%
! TAGAGTTTAGAGTTTCACAA+GGG - chr3_4:58603464-58603483 None:intergenic 30.0%
! ATAGAGTTTAGAGTTTCACA+AGG - chr3_4:58603465-58603484 None:intergenic 30.0%
AATTACAGAGCATGATTTAG+TGG + chr3_4:58603489-58603508 Msa0509950:intron 30.0%
!! TGAAAGCATCATCAAGAAAA+AGG + chr3_4:58603583-58603602 Msa0509950:intron 30.0%
!! GAAAGCATCATCAAGAAAAA+GGG + chr3_4:58603584-58603603 Msa0509950:intron 30.0%
! GGACTTCTATATTTTATGAC+TGG - chr3_4:58603737-58603756 None:intergenic 30.0%
ATTGAAACAAAGCCAAGATT+TGG + chr3_4:58603972-58603991 Msa0509950:intron 30.0%
TATGAGTACCAGTTTCATAA+AGG - chr3_4:58604029-58604048 None:intergenic 30.0%
ACACTAATGCAGATGATTAA+TGG - chr3_4:58604149-58604168 None:intergenic 30.0%
ACACTACTGAAATTCATTCT+AGG + chr3_4:58604188-58604207 Msa0509950:intron 30.0%
ATAGTTATGTGTATGTTTGC+TGG - chr3_4:58604220-58604239 None:intergenic 30.0%
AAATTAGGTAGAACTTATCC+TGG - chr3_4:58604317-58604336 None:intergenic 30.0%
! ATTTATTCTTTTGCACTGTC+TGG + chr3_4:58604356-58604375 Msa0509950:intron 30.0%
! TTTATTAGTCTGTGAACTTC+AGG + chr3_4:58604617-58604636 Msa0509950:intron 30.0%
! TTATTAGTCTGTGAACTTCA+GGG + chr3_4:58604618-58604637 Msa0509950:intron 30.0%
TATACTCCAGTAAAAGAACA+GGG - chr3_4:58604695-58604714 None:intergenic 30.0%
ATATACTCCAGTAAAAGAAC+AGG - chr3_4:58604696-58604715 None:intergenic 30.0%
! AATATTTTCCCCAAAGAGTA+TGG + chr3_4:58604833-58604852 Msa0509950:intron 30.0%
TTTACATACCATACTCTTTG+GGG - chr3_4:58604844-58604863 None:intergenic 30.0%
AATTGACATCAGTTAAAGGA+AGG - chr3_4:58604923-58604942 None:intergenic 30.0%
GTTGTAAAAGGAGAAATCAA+TGG - chr3_4:58604974-58604993 None:intergenic 30.0%
! GATTTAGCTTAAATGGTAGA+AGG - chr3_4:58605060-58605079 None:intergenic 30.0%
TAAAATAGTTGGGTGATTAG+AGG - chr3_4:58605089-58605108 None:intergenic 30.0%
CTAGGTAGTCATAAAATAGT+TGG - chr3_4:58605100-58605119 None:intergenic 30.0%
AGTTACAGTATTAGTTAGGT+AGG - chr3_4:58605124-58605143 None:intergenic 30.0%
GTGTAGTTACAGTATTAGTT+AGG - chr3_4:58605128-58605147 None:intergenic 30.0%
AGAAATGAAATGAGTGATAC+AGG - chr3_4:58605204-58605223 None:intergenic 30.0%
AATTAGCAAGATAACATCCA+TGG - chr3_4:58605246-58605265 None:intergenic 30.0%
! ACCTTTCTATCCTTTTCATT+AGG - chr3_4:58605554-58605573 None:intergenic 30.0%
AGATTCAATAGAAGGTGAAA+AGG - chr3_4:58605625-58605644 None:intergenic 30.0%
TTTCACCTTCTATTGAATCT+TGG + chr3_4:58605625-58605644 Msa0509950:intron 30.0%
ACCAACAATCCAAATATTGA+GGG - chr3_4:58605693-58605712 None:intergenic 30.0%
AACCAACAATCCAAATATTG+AGG - chr3_4:58605694-58605713 None:intergenic 30.0%
!!! CTCATGCTGTTTTCTTTTTA+TGG + chr3_4:58605723-58605742 Msa0509950:intron 30.0%
TTGGATGCATGTTATAATCA+AGG + chr3_4:58605753-58605772 Msa0509950:intron 30.0%
GGATATTTACTATTGTGAAC+TGG + chr3_4:58605800-58605819 Msa0509950:intron 30.0%
!! GTGTAATTTTGACAAATAGG+AGG + chr3_4:58606030-58606049 Msa0509950:intron 30.0%
AAAAAAAAGGCAGGTATTAG+CGG - chr3_4:58606124-58606143 None:intergenic 30.0%
! GAAAGCATAAAAAAAAAGGC+AGG - chr3_4:58606133-58606152 None:intergenic 30.0%
ATAAGCATTTATTTAGGGGT+GGG - chr3_4:58606246-58606265 None:intergenic 30.0%
AATAAGCATTTATTTAGGGG+TGG - chr3_4:58606247-58606266 None:intergenic 30.0%
ACACAAAATAAATCCATCTG+AGG - chr3_4:58606372-58606391 None:intergenic 30.0%
AGATCAAGATTAATGGTACA+TGG - chr3_4:58606496-58606515 None:intergenic 30.0%
TGTACCATTAATCTTGATCT+TGG + chr3_4:58606496-58606515 Msa0509950:intron 30.0%
TTGTCCAAGATCAAGATTAA+TGG - chr3_4:58606503-58606522 None:intergenic 30.0%
TTCAATGACTCTTATTCTCA+TGG - chr3_4:58606570-58606589 None:intergenic 30.0%
GTTAATTTAGGGGTTTCTTA+AGG + chr3_4:58606688-58606707 Msa0509950:intron 30.0%
!!! TTTGAGACCCCTTTTTTTAA+TGG + chr3_4:58606754-58606773 Msa0509950:intron 30.0%
TAATCCTCTTTATGTCATTG+AGG + chr3_4:58606856-58606875 Msa0509950:intron 30.0%
!! CTCGATATTCTCTGAAATAA+TGG - chr3_4:58607033-58607052 None:intergenic 30.0%
GAACAGAAAATAATCACTCA+AGG + chr3_4:58607256-58607275 Msa0509950:CDS 30.0%
! CTTAGCAAAAGCTTTGATAA+TGG + chr3_4:58607333-58607352 Msa0509950:CDS 30.0%
ACGCCATTTAAACTCTTAAA+AGG - chr3_4:58607480-58607499 None:intergenic 30.0%
TAATGGTTCAAAATTCCCAA+AGG + chr3_4:58607605-58607624 Msa0509950:CDS 30.0%
ATATGGATGGGGAAATTTAA+AGG - chr3_4:58607798-58607817 None:intergenic 30.0%
AATAGCTCTTCTATATGGAT+GGG - chr3_4:58607810-58607829 None:intergenic 30.0%
TAATAGCTCTTCTATATGGA+TGG - chr3_4:58607811-58607830 None:intergenic 30.0%
TATCAAGAGTTAGCAAGTTA+AGG - chr3_4:58608010-58608029 None:intergenic 30.0%
AAGCTAACCTGATTATATTC+AGG - chr3_4:58608089-58608108 None:intergenic 30.0%
GGTGTCAAGTTTGTAATTTA+AGG + chr3_4:58608305-58608324 Msa0509950:intron 30.0%
GTAATTTAAGGATCACAACA+CGG + chr3_4:58608317-58608336 Msa0509950:intron 30.0%
!! TATTATCTAATTTGCTCGAG+AGG - chr3_4:58608564-58608583 None:intergenic 30.0%
!!! AAGTTTTAGGGTCAGATAAA+GGG - chr3_4:58608843-58608862 None:intergenic 30.0%
!!! TAAGTTTTAGGGTCAGATAA+AGG - chr3_4:58608844-58608863 None:intergenic 30.0%
!!! GCAACTAGGTTTTAAGTTTT+AGG - chr3_4:58608856-58608875 None:intergenic 30.0%
AAAAGATATGTGGGATTGTA+AGG - chr3_4:58608915-58608934 None:intergenic 30.0%
! ATCAAGAGCCAATTTTACAA+TGG + chr3_4:58609033-58609052 Msa0509950:intron 30.0%
ACTTATTAAGTTATCTGTGC+TGG + chr3_4:58609090-58609109 Msa0509950:intron 30.0%
!!! TGCCAATTTGTTTTGGAAAT+GGG + chr3_4:58609181-58609200 Msa0509950:intron 30.0%
ATCCCATTTCCAAAACAAAT+TGG - chr3_4:58609186-58609205 None:intergenic 30.0%
!!! ATTTGTTTTGGAAATGGGAT+CGG + chr3_4:58609186-58609205 Msa0509950:intron 30.0%
ATACGTAAGCATTTAAACAC+GGG - chr3_4:58609424-58609443 None:intergenic 30.0%
!!! GGTTTTTGAGATTTTCTTGT+TGG + chr3_4:58609526-58609545 Msa0509950:intron 30.0%
ACATGTAGCTATATATCTTG+AGG + chr3_4:58610317-58610336 Msa0509950:intron 30.0%
CATGTAGCTATATATCTTGA+GGG + chr3_4:58610318-58610337 Msa0509950:intron 30.0%
ATGTAGCTATATATCTTGAG+GGG + chr3_4:58610319-58610338 Msa0509950:intron 30.0%
!! TAACAAACGTTCATTTTTGC+AGG + chr3_4:58610864-58610883 Msa0509950:intron 30.0%
AAAATCATTAACAGCAAGGT+TGG - chr3_4:58610947-58610966 None:intergenic 30.0%
! TGCAACATTTTTCGCTATAA+AGG - chr3_4:58610982-58611001 None:intergenic 30.0%
CAAACCTACAGATACATTAA+GGG - chr3_4:58611006-58611025 None:intergenic 30.0%
ACAAACCTACAGATACATTA+AGG - chr3_4:58611007-58611026 None:intergenic 30.0%
TGATTATCAAAGGTCATACA+CGG - chr3_4:58611151-58611170 None:intergenic 30.0%
TTACCATTCTTTCTTGGTAA+AGG + chr3_4:58611188-58611207 Msa0509950:three_prime_UTR 30.0%
TCGTAATTTGAGAAGAAGGT+GGG - chr3_4:58598865-58598884 None:intergenic 35.0%
CAGAGAGAAATATAGTGCTT+GGG - chr3_4:58598888-58598907 None:intergenic 35.0%
ACAGAGAGAAATATAGTGCT+TGG - chr3_4:58598889-58598908 None:intergenic 35.0%
ATGCAGTAAAACGTTGAAAG+GGG - chr3_4:58598942-58598961 None:intergenic 35.0%
ACAGAAGGGAAGAAAAAGAA+CGG - chr3_4:58598974-58598993 None:intergenic 35.0%
TTAGGGTTCGTTGTAGATTA+GGG - chr3_4:58599245-58599264 None:intergenic 35.0%
ATTAGGGTTCGTTGTAGATT+AGG - chr3_4:58599246-58599265 None:intergenic 35.0%
GTCGATTGAAGAAGGAATTA+GGG - chr3_4:58599262-58599281 None:intergenic 35.0%
! TGTCGATTGAAGAAGGAATT+AGG - chr3_4:58599263-58599282 None:intergenic 35.0%
! CAGAAATTGTCGATTGAAGA+AGG - chr3_4:58599270-58599289 None:intergenic 35.0%
!! GCTACGTATTCATTTTTCGA+AGG + chr3_4:58599341-58599360 Msa0509950:five_prime_UTR 35.0%
ATGCTACAAACAAGTGAGTT+TGG - chr3_4:58599402-58599421 None:intergenic 35.0%
TAGGAACTAAACTAGAAAGG+TGG - chr3_4:58599793-58599812 None:intergenic 35.0%
GCAATAAAGATGTCTGATGT+CGG - chr3_4:58600142-58600161 None:intergenic 35.0%
TTTATTGCAACCATGACATC+TGG + chr3_4:58600154-58600173 Msa0509950:exon 35.0%
AGAATAAATTCCATTCGCTG+TGG - chr3_4:58600212-58600231 None:intergenic 35.0%
GCGTATGCATTATAATCTTG+TGG - chr3_4:58600355-58600374 None:intergenic 35.0%
!!! GTATTTTGATATGCTCCTAC+AGG - chr3_4:58600481-58600500 None:intergenic 35.0%
! GTAGGAGCATATCAAAATAC+AGG + chr3_4:58600481-58600500 Msa0509950:CDS 35.0%
! GTATTCTGAAAGGAGGAAAT+AGG - chr3_4:58600520-58600539 None:intergenic 35.0%
ATTTCCTCCTTTCAGAATAC+TGG + chr3_4:58600520-58600539 Msa0509950:CDS 35.0%
TTTCCTCCTTTCAGAATACT+GGG + chr3_4:58600521-58600540 Msa0509950:CDS 35.0%
ATTAGACCCAGTATTCTGAA+AGG - chr3_4:58600530-58600549 None:intergenic 35.0%
ATCAGCCACAATACAATCAA+TGG + chr3_4:58600758-58600777 Msa0509950:CDS 35.0%
TCAGCCACAATACAATCAAT+GGG + chr3_4:58600759-58600778 Msa0509950:CDS 35.0%
AACCCAAAGTAGATGAACTT+GGG - chr3_4:58600843-58600862 None:intergenic 35.0%
TATTGTGGATATGATTGTGG+AGG - chr3_4:58600925-58600944 None:intergenic 35.0%
GATATTCAAACCTGTAAAGG+CGG - chr3_4:58600979-58600998 None:intergenic 35.0%
CATGATGATTACTGGAAACA+TGG + chr3_4:58601317-58601336 Msa0509950:CDS 35.0%
! AAAGATGGAGCACTTTGTAA+GGG - chr3_4:58601551-58601570 None:intergenic 35.0%
! ACTCGTTTTGTATCCAAAGA+TGG - chr3_4:58601566-58601585 None:intergenic 35.0%
! GTCAAATTTGAAGCAATTCG+AGG - chr3_4:58601614-58601633 None:intergenic 35.0%
TGTTTGAATTTACCGAAGTG+TGG + chr3_4:58602105-58602124 Msa0509950:intron 35.0%
GTTTGAATTTACCGAAGTGT+GGG + chr3_4:58602106-58602125 Msa0509950:intron 35.0%
TTTGAATTTACCGAAGTGTG+GGG + chr3_4:58602107-58602126 Msa0509950:intron 35.0%
GCAATATTTAGCAGGCATAT+TGG - chr3_4:58602242-58602261 None:intergenic 35.0%
!! TTTGGAACTTTTGTATGCAG+AGG + chr3_4:58602339-58602358 Msa0509950:intron 35.0%
! ACGAGACTAGGAACTTATTT+TGG + chr3_4:58602365-58602384 Msa0509950:intron 35.0%
! AACTTTTGTATGTAGAGGTC+TGG + chr3_4:58602388-58602407 Msa0509950:intron 35.0%
CAACATGTTCCATTTCACTA+AGG - chr3_4:58602414-58602433 None:intergenic 35.0%
CTTAGTGAAATGGAACATGT+TGG + chr3_4:58602412-58602431 Msa0509950:intron 35.0%
GTTATCAGCATCTTAGTCAA+CGG + chr3_4:58602546-58602565 Msa0509950:intron 35.0%
GCATAACGGTTCATATTGAT+TGG - chr3_4:58602600-58602619 None:intergenic 35.0%
! ATGAACCGTTATGCCTATTT+TGG + chr3_4:58602606-58602625 Msa0509950:intron 35.0%
! TGAACCGTTATGCCTATTTT+GGG + chr3_4:58602607-58602626 Msa0509950:intron 35.0%
CATACCCAAAATAGGCATAA+CGG - chr3_4:58602614-58602633 None:intergenic 35.0%
TGCACAAAGTTAGCAAAAAG+TGG - chr3_4:58602723-58602742 None:intergenic 35.0%
ACTATTCATTTCTTACAGCC+CGG + chr3_4:58602939-58602958 Msa0509950:intron 35.0%
! GGTGAGTTTCACTTTAAGTT+TGG + chr3_4:58603202-58603221 Msa0509950:intron 35.0%
!! GAAGAATTCCAAAGTATCGT+TGG - chr3_4:58603327-58603346 None:intergenic 35.0%
AGAGGAAAATAAGACAGATG+AGG - chr3_4:58603864-58603883 None:intergenic 35.0%
GTGTAAGTTGCAACAGAAAT+TGG + chr3_4:58603946-58603965 Msa0509950:intron 35.0%
! ACAAAGCCAAGATTTGGTAA+AGG + chr3_4:58603978-58603997 Msa0509950:intron 35.0%
AAGACTCCTTTACCAAATCT+TGG - chr3_4:58603987-58604006 None:intergenic 35.0%
GGTACTCATACAACTATACT+TGG + chr3_4:58604039-58604058 Msa0509950:intron 35.0%
CTCATACAACTATACTTGGT+TGG + chr3_4:58604043-58604062 Msa0509950:intron 35.0%
!!! ATTAGTGTTTTGACAGTGTG+TGG + chr3_4:58604161-58604180 Msa0509950:intron 35.0%
! TTATGTGTATGTTTGCTGGT+TGG - chr3_4:58604216-58604235 None:intergenic 35.0%
! GACAATATTAGTTGCTTTCC+AGG + chr3_4:58604409-58604428 Msa0509950:intron 35.0%
! TATTAGTCTGTGAACTTCAG+GGG + chr3_4:58604619-58604638 Msa0509950:intron 35.0%
ATACTCCAGTAAAAGAACAG+GGG - chr3_4:58604694-58604713 None:intergenic 35.0%
GTACACATGTAAGAAGCTAT+AGG + chr3_4:58604720-58604739 Msa0509950:intron 35.0%
AGCAGTAGCTTAGTTGTAAA+AGG - chr3_4:58604986-58605005 None:intergenic 35.0%
AGTATTAGTTAGGTAGGTCT+AGG - chr3_4:58605118-58605137 None:intergenic 35.0%
ACTTTGGCAATACAGAATCA+TGG - chr3_4:58605352-58605371 None:intergenic 35.0%
!! CTAGGACTTTTTCTAGACTT+TGG - chr3_4:58605368-58605387 None:intergenic 35.0%
TAGACGATCTAAAAGTAGGT+GGG + chr3_4:58605385-58605404 Msa0509950:CDS 35.0%
! GTATCATTACTTGTTGACAC+AGG - chr3_4:58605446-58605465 None:intergenic 35.0%
! GTATCATTACTTGTTGACAC+AGG - chr3_4:58605446-58605465 None:intergenic 35.0%
GCCTAATGAAAAGGATAGAA+AGG + chr3_4:58605550-58605569 Msa0509950:CDS 35.0%
CCAACAATCCAAATATTGAG+GGG - chr3_4:58605692-58605711 None:intergenic 35.0%
ACTATTGTGAACTGGATACT+AGG + chr3_4:58605808-58605827 Msa0509950:intron 35.0%
AAGCAAAGATCATTAGCAGT+AGG - chr3_4:58605981-58606000 None:intergenic 35.0%
!! TATTTAGCAGTTTTGTGGTG+TGG + chr3_4:58606087-58606106 Msa0509950:intron 35.0%
AAAAAAAGGCAGGTATTAGC+GGG - chr3_4:58606123-58606142 None:intergenic 35.0%
TAAGCATTTATTTAGGGGTG+GGG - chr3_4:58606245-58606264 None:intergenic 35.0%
! TTTTGCTCATAATCGAGATC+CGG - chr3_4:58606443-58606462 None:intergenic 35.0%
ATTTAGGGGTTTCTTAAGGA+CGG + chr3_4:58606692-58606711 Msa0509950:intron 35.0%
GACGGCATCATTAATTATAG+TGG + chr3_4:58606710-58606729 Msa0509950:intron 35.0%
TGAACCTCAATGACATAAAG+AGG - chr3_4:58606863-58606882 None:intergenic 35.0%
GTTTCTACTGCTCATGAAAA+TGG + chr3_4:58607096-58607115 Msa0509950:CDS 35.0%
! TGCATCTAGTGATAGTGATA+AGG + chr3_4:58607122-58607141 Msa0509950:CDS 35.0%
TGCATATTATTCTGCTGCAA+TGG + chr3_4:58607158-58607177 Msa0509950:CDS 35.0%
! CGTTCTAAGCGATTTGATTT+AGG + chr3_4:58607222-58607241 Msa0509950:CDS 35.0%
AGGAAAAAAAATGCTAGAGC+TGG + chr3_4:58607276-58607295 Msa0509950:CDS 35.0%
TGGAAACTTGTACAACAGAA+GGG + chr3_4:58607296-58607315 Msa0509950:CDS 35.0%
CTTAAAAGGAGATATTACGG+TGG - chr3_4:58607466-58607485 None:intergenic 35.0%
!!! GCTTTTTCAAGAACATCTTC+AGG - chr3_4:58607580-58607599 None:intergenic 35.0%
ACACAACCAATTAACAGTCA+AGG + chr3_4:58607690-58607709 Msa0509950:CDS 35.0%
GTAGTACCTTGACTGTTAAT+TGG - chr3_4:58607699-58607718 None:intergenic 35.0%
ATAGCTCTTCTATATGGATG+GGG - chr3_4:58607809-58607828 None:intergenic 35.0%
AATGAAGTAAAAGAAAGGGG+TGG - chr3_4:58607847-58607866 None:intergenic 35.0%
AGAGTTAGCAAGTTAAGGAA+AGG - chr3_4:58608005-58608024 None:intergenic 35.0%
! AACTCTTGATACGTTGTTTC+AGG + chr3_4:58608019-58608038 Msa0509950:intron 35.0%
TAACCTGATTATATTCAGGC+AGG - chr3_4:58608085-58608104 None:intergenic 35.0%
GAAGGAAAAATGATAGCTAC+AGG - chr3_4:58608130-58608149 None:intergenic 35.0%
!!! TCATTTTTCCTTCTGAGATC+AGG + chr3_4:58608137-58608156 Msa0509950:intron 35.0%
!!! CATTTTTCCTTCTGAGATCA+GGG + chr3_4:58608138-58608157 Msa0509950:intron 35.0%
TATAAATCCCTGATCTCAGA+AGG - chr3_4:58608148-58608167 None:intergenic 35.0%
! GCATGCTTTTCAAACTATCA+TGG + chr3_4:58608182-58608201 Msa0509950:intron 35.0%
! ATTGAATAATGGGGCTTCAT+AGG + chr3_4:58608228-58608247 Msa0509950:intron 35.0%
ATTGCAGTTGTGTTTACGAA+CGG + chr3_4:58608755-58608774 Msa0509950:intron 35.0%
CAAGGATGGGAAAAATTGTT+CGG + chr3_4:58608877-58608896 Msa0509950:intron 35.0%
CGGAATGTCAAAAGATATGT+GGG - chr3_4:58608924-58608943 None:intergenic 35.0%
ACGGAATGTCAAAAGATATG+TGG - chr3_4:58608925-58608944 None:intergenic 35.0%
!! TTGGCTCTTGATAATGTTGT+CGG - chr3_4:58609025-58609044 None:intergenic 35.0%
!! ATCTAGGTGCCAATTTGTTT+TGG + chr3_4:58609174-58609193 Msa0509950:intron 35.0%
!!! GTGCCAATTTGTTTTGGAAA+TGG + chr3_4:58609180-58609199 Msa0509950:intron 35.0%
AAAGAGCCTTTAACTGAGAT+TGG - chr3_4:58609289-58609308 None:intergenic 35.0%
TTAAAGGCTCTTTATGCTGA+AGG + chr3_4:58609296-58609315 Msa0509950:CDS 35.0%
TAAAGGCTCTTTATGCTGAA+GGG + chr3_4:58609297-58609316 Msa0509950:CDS 35.0%
TACGTAAGCATTTAAACACG+GGG - chr3_4:58609423-58609442 None:intergenic 35.0%
ATTAATACCGTGATGTTTGC+TGG + chr3_4:58609504-58609523 Msa0509950:intron 35.0%
TTAATACCGTGATGTTTGCT+GGG + chr3_4:58609505-58609524 Msa0509950:intron 35.0%
! AGATTTTCTTGTTGGTCCTT+TGG + chr3_4:58609534-58609553 Msa0509950:intron 35.0%
! GATTTTCTTGTTGGTCCTTT+GGG + chr3_4:58609535-58609554 Msa0509950:intron 35.0%
AGGTATAAGAGTCAACAAAG+TGG - chr3_4:58609654-58609673 None:intergenic 35.0%
ACAATTGACATTATCAGCCT+AGG + chr3_4:58609722-58609741 Msa0509950:intron 35.0%
!! ATTGCAATTTTGTTTGGGCA+AGG + chr3_4:58609887-58609906 Msa0509950:intron 35.0%
GCCATAAATTTGAGCCTTAA+GGG - chr3_4:58609937-58609956 None:intergenic 35.0%
AGCCATAAATTTGAGCCTTA+AGG - chr3_4:58609938-58609957 None:intergenic 35.0%
GCTCAAATTTATGGCTGTTT+GGG + chr3_4:58609942-58609961 Msa0509950:intron 35.0%
TGATAGTACAAAGGTAACGA+CGG - chr3_4:58610089-58610108 None:intergenic 35.0%
! ATAAGGCAGGTGTTTAAGTT+CGG - chr3_4:58610273-58610292 None:intergenic 35.0%
AACTTAAACACCTGCCTTAT+GGG + chr3_4:58610273-58610292 Msa0509950:CDS 35.0%
TGTAGCTATATATCTTGAGG+GGG + chr3_4:58610320-58610339 Msa0509950:intron 35.0%
TGAAGCAAATGATGAGAAAG+AGG + chr3_4:58610495-58610514 Msa0509950:CDS 35.0%
!! CTTTGGAAGAGTGTTTAGAA+TGG + chr3_4:58610524-58610543 Msa0509950:CDS 35.0%
TTAGAATGGTTGAAAGCTCA+TGG + chr3_4:58610538-58610557 Msa0509950:CDS 35.0%
TGATAACAATGGAGACATGA+TGG + chr3_4:58610576-58610595 Msa0509950:CDS 35.0%
! TCTCATACCATTTTCAGAGT+TGG + chr3_4:58610718-58610737 Msa0509950:intron 35.0%
CAGATTTGAGAATAGGTTCT+GGG - chr3_4:58611070-58611089 None:intergenic 35.0%
CAGAACCTATTCTCAAATCT+GGG + chr3_4:58611069-58611088 Msa0509950:three_prime_UTR 35.0%
TGTCCTTTACCAAGAAAGAA+TGG - chr3_4:58611194-58611213 None:intergenic 35.0%
CGTAATTTGAGAAGAAGGTG+GGG - chr3_4:58598864-58598883 None:intergenic 40.0%
GTCGTAATTTGAGAAGAAGG+TGG - chr3_4:58598866-58598885 None:intergenic 40.0%
TGGGTCGTAATTTGAGAAGA+AGG - chr3_4:58598869-58598888 None:intergenic 40.0%
AAAACGTTGAAAGGGGTTGT+TGG - chr3_4:58598935-58598954 None:intergenic 40.0%
TAGATTAGGGTTCTTCGATG+CGG - chr3_4:58599232-58599251 None:intergenic 40.0%
TACGTAGCAGAAATCGTTGA+AGG - chr3_4:58599329-58599348 None:intergenic 40.0%
!!! TCTCTAATTTTGCACCGACT+TGG + chr3_4:58599376-58599395 Msa0509950:intron 40.0%
AAACTAGAAAGGTGGCATCA+AGG - chr3_4:58599785-58599804 None:intergenic 40.0%
CAAAGTGTATCATCAGTTGC+TGG + chr3_4:58600298-58600317 Msa0509950:CDS 40.0%
AAGGAGGAAATAGGCTGATA+AGG - chr3_4:58600511-58600530 None:intergenic 40.0%
TAACTGTCATTGTTCCATGC+CGG - chr3_4:58600649-58600668 None:intergenic 40.0%
! GTAACTTGTATACGGATGAG+AGG - chr3_4:58600683-58600702 None:intergenic 40.0%
! TCTGTGGCGTAACTTGTATA+CGG - chr3_4:58600691-58600710 None:intergenic 40.0%
ATAAGAGCTACTGGAATCTG+TGG - chr3_4:58600707-58600726 None:intergenic 40.0%
TCCAGTAGCTCTTATAGTAC+TGG + chr3_4:58600712-58600731 Msa0509950:CDS 40.0%
ACCAGTACTATAAGAGCTAC+TGG - chr3_4:58600716-58600735 None:intergenic 40.0%
TGTCCCAAGTTCATCTACTT+TGG + chr3_4:58600837-58600856 Msa0509950:CDS 40.0%
GTCCCAAGTTCATCTACTTT+GGG + chr3_4:58600838-58600857 Msa0509950:CDS 40.0%
CAACCCAAAGTAGATGAACT+TGG - chr3_4:58600844-58600863 None:intergenic 40.0%
TGGCACAAGATTGATGCATT+TGG + chr3_4:58601196-58601215 Msa0509950:intron 40.0%
CAGAAGACAGTATCTTCTCA+AGG + chr3_4:58601464-58601483 Msa0509950:CDS 40.0%
! AGGAAGAGGGAAGTACAAAT+TGG - chr3_4:58601492-58601511 None:intergenic 40.0%
! CAAAGATGGAGCACTTTGTA+AGG - chr3_4:58601552-58601571 None:intergenic 40.0%
! CTTACAAAGTGCTCCATCTT+TGG + chr3_4:58601550-58601569 Msa0509950:CDS 40.0%
GAAGCAATTCGAGGATTTGT+TGG - chr3_4:58601605-58601624 None:intergenic 40.0%
! GATGTGGAGCTATCTTTTTC+GGG - chr3_4:58601653-58601672 None:intergenic 40.0%
! GGATGTGGAGCTATCTTTTT+CGG - chr3_4:58601654-58601673 None:intergenic 40.0%
! GTGGGGAGATCTTTTCAAAA+AGG + chr3_4:58602124-58602143 Msa0509950:intron 40.0%
! ACTAAACTATGCATTCGGTG+TGG + chr3_4:58602186-58602205 Msa0509950:intron 40.0%
TTCCTGCTCACTGATAAATC+TGG + chr3_4:58602656-58602675 Msa0509950:intron 40.0%
CAAAGTTAGCAAAAAGTGGC+TGG - chr3_4:58602719-58602738 None:intergenic 40.0%
AACTATTCTTGCTTACAGCC+CGG + chr3_4:58603083-58603102 Msa0509950:intron 40.0%
AAAGACTTGGGAAACATACC+GGG - chr3_4:58603104-58603123 None:intergenic 40.0%
CAAAGACTTGGGAAACATAC+CGG - chr3_4:58603105-58603124 None:intergenic 40.0%
TGGCTATGTTGAAAGAGCTT+TGG + chr3_4:58603127-58603146 Msa0509950:CDS 40.0%
! AGTTTAGAGTTTCACAAGGG+AGG - chr3_4:58603461-58603480 None:intergenic 40.0%
ACTTCTGCGCAGAATAACAA+AGG - chr3_4:58603515-58603534 None:intergenic 40.0%
AATCAGACACATAAAGGGAG+AGG - chr3_4:58603882-58603901 None:intergenic 40.0%
TCATAAAGGCAGAATGGAAG+TGG - chr3_4:58604015-58604034 None:intergenic 40.0%
CCAGTTTCATAAAGGCAGAA+TGG - chr3_4:58604021-58604040 None:intergenic 40.0%
CCATTCTGCCTTTATGAAAC+TGG + chr3_4:58604018-58604037 Msa0509950:intron 40.0%
CACCAAGAACGATTCAAACT+GGG - chr3_4:58604124-58604143 None:intergenic 40.0%
TCCTTTGCAGATGATCACTA+AGG + chr3_4:58604463-58604482 Msa0509950:intron 40.0%
TACCCTATGCACACGTAATT+GGG + chr3_4:58604499-58604518 Msa0509950:CDS 40.0%
ATCCCAATTACGTGTGCATA+GGG - chr3_4:58604504-58604523 None:intergenic 40.0%
TATCCCAATTACGTGTGCAT+AGG - chr3_4:58604505-58604524 None:intergenic 40.0%
ATGCACACGTAATTGGGATA+TGG + chr3_4:58604505-58604524 Msa0509950:CDS 40.0%
AAGAGAGTGACATGTCAACT+CGG - chr3_4:58604599-58604618 None:intergenic 40.0%
TACTCCAGTAAAAGAACAGG+GGG - chr3_4:58604693-58604712 None:intergenic 40.0%
TTGATTCAATTCAGACGGTC+TGG + chr3_4:58604773-58604792 Msa0509950:intron 40.0%
! GAGCAGGGATTTAGCTTAAA+TGG - chr3_4:58605067-58605086 None:intergenic 40.0%
GTCCTAGACGATCTAAAAGT+AGG + chr3_4:58605381-58605400 Msa0509950:CDS 40.0%
!! CACCTACTTTTAGATCGTCT+AGG - chr3_4:58605386-58605405 None:intergenic 40.0%
CTAGACGATCTAAAAGTAGG+TGG + chr3_4:58605384-58605403 Msa0509950:CDS 40.0%
! TACTTGTTGACACAGGATGA+TGG - chr3_4:58605439-58605458 None:intergenic 40.0%
! TACTTGTTGACACAGGATGA+TGG - chr3_4:58605439-58605458 None:intergenic 40.0%
TAGTTGGGTGCCTAATGAAA+AGG + chr3_4:58605541-58605560 Msa0509950:CDS 40.0%
GTGAAAAGGATAACTCTTGC+TGG - chr3_4:58605611-58605630 None:intergenic 40.0%
ACCTTCTATTGAATCTTGGC+TGG + chr3_4:58605629-58605648 Msa0509950:intron 40.0%
TCCAGCCAAGATTCAATAGA+AGG - chr3_4:58605633-58605652 None:intergenic 40.0%
CCCCTCAATATTTGGATTGT+TGG + chr3_4:58605689-58605708 Msa0509950:intron 40.0%
! GGTGCATTATGTTCCCATTT+TGG + chr3_4:58605829-58605848 Msa0509950:intron 40.0%
AAGCATTTATTTAGGGGTGG+GGG - chr3_4:58606244-58606263 None:intergenic 40.0%
!! AATTGTTCTATGTTGGCTCC+TGG + chr3_4:58606319-58606338 Msa0509950:intron 40.0%
!! ATTGTTCTATGTTGGCTCCT+GGG + chr3_4:58606320-58606339 Msa0509950:intron 40.0%
GGATCTTCTTGAAAGGAAGA+CGG - chr3_4:58606351-58606370 None:intergenic 40.0%
CATCTGAGGATCTTCTTGAA+AGG - chr3_4:58606358-58606377 None:intergenic 40.0%
CTTTCAAGAAGATCCTCAGA+TGG + chr3_4:58606356-58606375 Msa0509950:intron 40.0%
!! TTTTCATCTGTGAAGTACCC+CGG + chr3_4:58606421-58606440 Msa0509950:intron 40.0%
TTTGCTCATAATCGAGATCC+GGG - chr3_4:58606442-58606461 None:intergenic 40.0%
AGCACATAACCTCACTTAGT+AGG + chr3_4:58606462-58606481 Msa0509950:intron 40.0%
GCTATCTTTCCTACTAAGTG+AGG - chr3_4:58606474-58606493 None:intergenic 40.0%
TAATACTTATACCCCCTCTG+AGG - chr3_4:58606838-58606857 None:intergenic 40.0%
AGTGGAAAACAAAGAGAGCA+AGG + chr3_4:58606978-58606997 Msa0509950:CDS 40.0%
TGCTTCTTAAATGGCCTTTG+GGG - chr3_4:58607063-58607082 None:intergenic 40.0%
CTGCTTCTTAAATGGCCTTT+GGG - chr3_4:58607064-58607083 None:intergenic 40.0%
! GGCTTTTAATGATACACCAG+AGG + chr3_4:58607179-58607198 Msa0509950:CDS 40.0%
! TCACGTCTTTTCTTTTCCTC+TGG - chr3_4:58607198-58607217 None:intergenic 40.0%
CTGGAAACTTGTACAACAGA+AGG + chr3_4:58607295-58607314 Msa0509950:CDS 40.0%
AAGCTGTTGAGGATATTGAC+TGG + chr3_4:58607364-58607383 Msa0509950:CDS 40.0%
! AGCTGTTGAGGATATTGACT+GGG + chr3_4:58607365-58607384 Msa0509950:CDS 40.0%
TGGGATGCTCTTACTGTAAA+GGG + chr3_4:58607384-58607403 Msa0509950:CDS 40.0%
!! GGTATCGCTTTTCAATTTCC+TGG - chr3_4:58607416-58607435 None:intergenic 40.0%
AAAAGGAGATATTACGGTGG+CGG - chr3_4:58607463-58607482 None:intergenic 40.0%
CTTGGCGAATAGACTTTAAC+TGG - chr3_4:58607651-58607670 None:intergenic 40.0%
TGTGTATTCGTTGCACAGTT+AGG - chr3_4:58607675-58607694 None:intergenic 40.0%
GTTAGCAAGTTAAGGAAAGG+TGG - chr3_4:58608002-58608021 None:intergenic 40.0%
AGGTATATGAAACTCATGCC+CGG + chr3_4:58608039-58608058 Msa0509950:intron 40.0%
CTTGAGATTCTACCTAGAAC+CGG + chr3_4:58608280-58608299 Msa0509950:intron 40.0%
TTGAGATTCTACCTAGAACC+GGG + chr3_4:58608281-58608300 Msa0509950:intron 40.0%
ATTACAAACTTGACACCACC+CGG - chr3_4:58608302-58608321 None:intergenic 40.0%
! GTATTTCAAGTAGGCGTAGT+AGG - chr3_4:58608353-58608372 None:intergenic 40.0%
!! ATCTAATTTGCTCGAGAGGA+GGG - chr3_4:58608560-58608579 None:intergenic 40.0%
!! TATCTAATTTGCTCGAGAGG+AGG - chr3_4:58608561-58608580 None:intergenic 40.0%
ATAAGGGAGAGGATATATGC+AGG + chr3_4:58608596-58608615 Msa0509950:intron 40.0%
CTTCTGTGACAAGTTGTTTG+TGG - chr3_4:58608697-58608716 None:intergenic 40.0%
CACAAACAACTTGTCACAGA+AGG + chr3_4:58608695-58608714 Msa0509950:intron 40.0%
TTGCAGTTGTGTTTACGAAC+GGG + chr3_4:58608756-58608775 Msa0509950:intron 40.0%
! TTTAGGGTCAGATAAAGGGT+TGG - chr3_4:58608839-58608858 None:intergenic 40.0%
ACTTAAAACCTAGTTGCGCA+AGG + chr3_4:58608859-58608878 Msa0509950:intron 40.0%
ATGTGGGATTGTAAGGTTGA+AGG - chr3_4:58608908-58608927 None:intergenic 40.0%
! TCTTTTGACATTCCGTTCGT+AGG + chr3_4:58608929-58608948 Msa0509950:intron 40.0%
!! TGGCTCTTGATAATGTTGTC+GGG - chr3_4:58609024-58609043 None:intergenic 40.0%
TCGGTCTGTTATACATGTTG+AGG + chr3_4:58609205-58609224 Msa0509950:intron 40.0%
TCAGTGCCAATCTCAGTTAA+AGG + chr3_4:58609280-58609299 Msa0509950:intron 40.0%
CAGAGAACTCCTATCATCAA+TGG + chr3_4:58609388-58609407 Msa0509950:CDS 40.0%
AACTCCTATCATCAATGGCA+AGG + chr3_4:58609393-58609412 Msa0509950:CDS 40.0%
! TTCACCTTGCCATTGATGAT+AGG - chr3_4:58609400-58609419 None:intergenic 40.0%
CAAAAACCCAGCAAACATCA+CGG - chr3_4:58609514-58609533 None:intergenic 40.0%
CAACAGAAATGTGAGCACAT+GGG - chr3_4:58609628-58609647 None:intergenic 40.0%
AAATCAGCTATCCACCAGAA+GGG - chr3_4:58609763-58609782 None:intergenic 40.0%
TAAATCAGCTATCCACCAGA+AGG - chr3_4:58609764-58609783 None:intergenic 40.0%
!! AAGGCTAGTTTGGTAGCTAT+GGG + chr3_4:58609906-58609925 Msa0509950:intron 40.0%
GCCCTTAAGGCTCAAATTTA+TGG + chr3_4:58609933-58609952 Msa0509950:intron 40.0%
GGCTCAAATTTATGGCTGTT+TGG + chr3_4:58609941-58609960 Msa0509950:intron 40.0%
GTTATCTGACGAAGCAAAGA+AGG + chr3_4:58610161-58610180 Msa0509950:CDS 40.0%
TGAAGCTGTAAAACATGCTC+TGG + chr3_4:58610185-58610204 Msa0509950:CDS 40.0%
GAACTTAAACACCTGCCTTA+TGG + chr3_4:58610272-58610291 Msa0509950:CDS 40.0%
TCAATACTAACCCATAAGGC+AGG - chr3_4:58610286-58610305 None:intergenic 40.0%
AACCTGAGATACGTAGGAAA+CGG - chr3_4:58610446-58610465 None:intergenic 40.0%
TAAACACTCTTCCAAAGCAG+TGG - chr3_4:58610521-58610540 None:intergenic 40.0%
CTTTAGATTTGCAGACCAGT+AGG + chr3_4:58610627-58610646 Msa0509950:intron 40.0%
CAGCATTCAATGAAACCTAC+TGG - chr3_4:58610645-58610664 None:intergenic 40.0%
TCAAATGCAGCTGAGATTAC+AGG - chr3_4:58610683-58610702 None:intergenic 40.0%
! GTCAAAGCCAACTCTGAAAA+TGG - chr3_4:58610728-58610747 None:intergenic 40.0%
!! AATATGGGTTGATGAGTGAC+AGG - chr3_4:58610792-58610811 None:intergenic 40.0%
CTCTGGCACAAATAAACTAG+AGG - chr3_4:58610896-58610915 None:intergenic 40.0%
GCAACCCTTAATGTATCTGT+AGG + chr3_4:58610999-58611018 Msa0509950:three_prime_UTR 40.0%
CCAGATTTGAGAATAGGTTC+TGG - chr3_4:58611071-58611090 None:intergenic 40.0%
CCAGAACCTATTCTCAAATC+TGG + chr3_4:58611068-58611087 Msa0509950:three_prime_UTR 40.0%
CTAGTCCCAGATTTGAGAAT+AGG - chr3_4:58611077-58611096 None:intergenic 40.0%
ACAAGTGAGTTTGGCCAAGT+CGG - chr3_4:58599393-58599412 None:intergenic 45.0%
TATGGACGTAGCGTAGCATA+AGG + chr3_4:58599676-58599695 Msa0509950:intron 45.0%
ATGGACGTAGCGTAGCATAA+GGG + chr3_4:58599677-58599696 Msa0509950:intron 45.0%
CGTAGCATAAGGGGTTAACT+AGG + chr3_4:58599687-58599706 Msa0509950:intron 45.0%
AGAAAGGTGGCATCAAGGAA+TGG - chr3_4:58599780-58599799 None:intergenic 45.0%
GTGAACAGTAACCGCAATTG+TGG - chr3_4:58599986-58600005 None:intergenic 45.0%
! GCTCTGAACGTTCCATGAAA+CGG - chr3_4:58600188-58600207 None:intergenic 45.0%
ACCATCTTGAACGCTTCCTA+CGG - chr3_4:58600278-58600297 None:intergenic 45.0%
TCCATATGGTTATGGCAGCA+CGG + chr3_4:58600396-58600415 Msa0509950:CDS 45.0%
GGCTGAGAATAAGCAGGATT+AGG - chr3_4:58600460-58600479 None:intergenic 45.0%
! AGACCCAGTATTCTGAAAGG+AGG - chr3_4:58600527-58600546 None:intergenic 45.0%
CAGAATACTGGGTCTAATGC+TGG + chr3_4:58600532-58600551 Msa0509950:CDS 45.0%
GGAGGTTACCAAAACAGCAA+CGG + chr3_4:58600607-58600626 Msa0509950:CDS 45.0%
!!! TTGCGTATCCGTTGCTGTTT+TGG - chr3_4:58600618-58600637 None:intergenic 45.0%
GTATTGTGGCTGATACTGCA+CGG - chr3_4:58600752-58600771 None:intergenic 45.0%
GCCACAATACAATCAATGGG+CGG + chr3_4:58600762-58600781 Msa0509950:CDS 45.0%
! TCCGCCCATTGATTGTATTG+TGG - chr3_4:58600766-58600785 None:intergenic 45.0%
TGTGGAGGCTGGTAATTTGA+AGG - chr3_4:58600910-58600929 None:intergenic 45.0%
GACTCTTGCACCCAATATTG+TGG - chr3_4:58600940-58600959 None:intergenic 45.0%
GTGGTGGTCATGATGATTAC+TGG + chr3_4:58601309-58601328 Msa0509950:CDS 45.0%
!!! GAGCTATCTTTTTCGGGCTT+AGG - chr3_4:58601647-58601666 None:intergenic 45.0%
GAAAAGATCTCCCCACACTT+CGG - chr3_4:58602120-58602139 None:intergenic 45.0%
GTCCAGATTTATCAGTGAGC+AGG - chr3_4:58602661-58602680 None:intergenic 45.0%
ATGTTTCCCAAGTCTTTGCG+TGG + chr3_4:58603107-58603126 Msa0509950:CDS 45.0%
ACATAGCCACGCAAAGACTT+GGG - chr3_4:58603116-58603135 None:intergenic 45.0%
AACATAGCCACGCAAAGACT+TGG - chr3_4:58603117-58603136 None:intergenic 45.0%
TCATGCTCTGTTTGATCCCA+AGG - chr3_4:58603412-58603431 None:intergenic 45.0%
CATGTCCTTTCTGTGCACTT+GGG - chr3_4:58603815-58603834 None:intergenic 45.0%
TCATGTCCTTTCTGTGCACT+TGG - chr3_4:58603816-58603835 None:intergenic 45.0%
AGCCCAGTTTGAATCGTTCT+TGG + chr3_4:58604119-58604138 Msa0509950:intron 45.0%
GCACCAAGAACGATTCAAAC+TGG - chr3_4:58604125-58604144 None:intergenic 45.0%
TAGGTAGAACTTATCCTGGC+TGG - chr3_4:58604313-58604332 None:intergenic 45.0%
GCCTTAGTGATCATCTGCAA+AGG - chr3_4:58604467-58604486 None:intergenic 45.0%
GTACCCTATGCACACGTAAT+TGG + chr3_4:58604498-58604517 Msa0509950:CDS 45.0%
TTATTGTCTGCATCTGCCTC+CGG - chr3_4:58604548-58604567 None:intergenic 45.0%
! ACTTCCCCCTGTTCTTTTAC+TGG + chr3_4:58604686-58604705 Msa0509950:intron 45.0%
ATTCAATTCAGACGGTCTGG+AGG + chr3_4:58604776-58604795 Msa0509950:intron 45.0%
TTCAATTCAGACGGTCTGGA+GGG + chr3_4:58604777-58604796 Msa0509950:intron 45.0%
! GACACAGGATGATGGTTAAC+CGG - chr3_4:58605494-58605513 None:intergenic 45.0%
AGCATTTATTTAGGGGTGGG+GGG - chr3_4:58606243-58606262 None:intergenic 45.0%
TCCTCCATGTTCTGTTTGAG+TGG + chr3_4:58606395-58606414 Msa0509950:intron 45.0%
CCTCCATGTTCTGTTTGAGT+GGG + chr3_4:58606396-58606415 Msa0509950:intron 45.0%
AAGCCCACTCAAACAGAACA+TGG - chr3_4:58606402-58606421 None:intergenic 45.0%
TTGCTCATAATCGAGATCCG+GGG - chr3_4:58606441-58606460 None:intergenic 45.0%
TTGCTTATCCTTGACCTCAG+AGG + chr3_4:58606821-58606840 Msa0509950:intron 45.0%
TGCTTATCCTTGACCTCAGA+GGG + chr3_4:58606822-58606841 Msa0509950:intron 45.0%
CACCTAAATGAATGGCATGC+AGG + chr3_4:58606951-58606970 Msa0509950:intron 45.0%
CACCTGCATGCCATTCATTT+AGG - chr3_4:58606956-58606975 None:intergenic 45.0%
CTAAATGAATGGCATGCAGG+TGG + chr3_4:58606954-58606973 Msa0509950:intron 45.0%
AAGAGAGCAAGGAAGACAGT+TGG + chr3_4:58606989-58607008 Msa0509950:CDS 45.0%
TATCGAGTAAAGCTCCCCAA+AGG + chr3_4:58607046-58607065 Msa0509950:CDS 45.0%
GCTGCTTCTTAAATGGCCTT+TGG - chr3_4:58607065-58607084 None:intergenic 45.0%
GCAAGACGCTGCTTCTTAAA+TGG - chr3_4:58607072-58607091 None:intergenic 45.0%
CTGGGATGCTCTTACTGTAA+AGG + chr3_4:58607383-58607402 Msa0509950:CDS 45.0%
!! TCGCTTTTCAATTTCCTGGC+AGG - chr3_4:58607412-58607431 None:intergenic 45.0%
AAAGGAGATATTACGGTGGC+GGG - chr3_4:58607462-58607481 None:intergenic 45.0%
TTCGTTGCACAGTTAGGTCT+TGG - chr3_4:58607669-58607688 None:intergenic 45.0%
ATATGAAACTCATGCCCGGT+TGG + chr3_4:58608043-58608062 Msa0509950:CDS 45.0%
GGACCTGCCTGAATATAATC+AGG + chr3_4:58608079-58608098 Msa0509950:CDS 45.0%
ACAAAACAGTCTGTCTCGTC+AGG + chr3_4:58608527-58608546 Msa0509950:intron 45.0%
TTTCTACTGTGCGTGCATCT+TGG - chr3_4:58608634-58608653 None:intergenic 45.0%
ACACAACTGCAATCCAAGAC+CGG - chr3_4:58608748-58608767 None:intergenic 45.0%
AAAACCTAGTTGCGCAAGGA+TGG + chr3_4:58608863-58608882 Msa0509950:intron 45.0%
AAACCTAGTTGCGCAAGGAT+GGG + chr3_4:58608864-58608883 Msa0509950:intron 45.0%
GGGATTGTAAGGTTGAAGGT+GGG - chr3_4:58608904-58608923 None:intergenic 45.0%
TGGGATTGTAAGGTTGAAGG+TGG - chr3_4:58608905-58608924 None:intergenic 45.0%
TGTAGCTCAGCATGGAAACA+TGG + chr3_4:58608952-58608971 Msa0509950:intron 45.0%
TCAGCATGGAAACATGGTTG+AGG + chr3_4:58608958-58608977 Msa0509950:intron 45.0%
CTTTATGCTGAAGGGATCGA+AGG + chr3_4:58609305-58609324 Msa0509950:CDS 45.0%
! TTGTTGGTCCTTTGGGAGTT+AGG + chr3_4:58609542-58609561 Msa0509950:intron 45.0%
TTATGGGACCTAACTCCCAA+AGG - chr3_4:58609553-58609572 None:intergenic 45.0%
GCAACAGAAATGTGAGCACA+TGG - chr3_4:58609629-58609648 None:intergenic 45.0%
AATCAGCTATCCACCAGAAG+GGG - chr3_4:58609762-58609781 None:intergenic 45.0%
! TTGTTTGGGCAAGGCTAGTT+TGG + chr3_4:58609896-58609915 Msa0509950:intron 45.0%
!! CAAGGCTAGTTTGGTAGCTA+TGG + chr3_4:58609905-58609924 Msa0509950:intron 45.0%
! CTAGTTTGGTAGCTATGGGA+GGG + chr3_4:58609910-58609929 Msa0509950:intron 45.0%
! TAGTTTGGTAGCTATGGGAG+GGG + chr3_4:58609911-58609930 Msa0509950:intron 45.0%
AGATACGTAGGAAACGGGTA+CGG - chr3_4:58610440-58610459 None:intergenic 45.0%
ACCTGAGATACGTAGGAAAC+GGG - chr3_4:58610445-58610464 None:intergenic 45.0%
TCCTACGTATCTCAGGTTCT+AGG + chr3_4:58610448-58610467 Msa0509950:CDS 45.0%
TCCTAGAACCTGAGATACGT+AGG - chr3_4:58610452-58610471 None:intergenic 45.0%
! CAAATCTGGGACTAGTGTCA+TGG + chr3_4:58611082-58611101 Msa0509950:three_prime_UTR 45.0%
GGGTGCTTACCATTCTTTCT+TGG + chr3_4:58611182-58611201 Msa0509950:three_prime_UTR 45.0%
!! AATATTAATATGTATAATAT+TGG + chr3_4:58601874-58601893 Msa0509950:intron 5.0%
!!! TTATAAAACTTTTTTTTTTA+CGG + chr3_4:58602267-58602286 Msa0509950:intron 5.0%
!!! TTATAGATATATTTAATTTA+TGG + chr3_4:58605575-58605594 Msa0509950:intron 5.0%
!! ATAAAACTTATAATTAATTT+AGG + chr3_4:58606592-58606611 Msa0509950:intron 5.0%
!! TAAAACTTATAATTAATTTA+GGG + chr3_4:58606593-58606612 Msa0509950:intron 5.0%
!! TAATAAATTGAATATAAATA+AGG + chr3_4:58608579-58608598 Msa0509950:intron 5.0%
!! AATAAATTGAATATAAATAA+GGG + chr3_4:58608580-58608599 Msa0509950:intron 5.0%
TGGACGTAGCGTAGCATAAG+GGG + chr3_4:58599678-58599697 Msa0509950:intron 50.0%
TCATAACGCGGCCACAATTG+CGG + chr3_4:58599972-58599991 Msa0509950:intron 50.0%
GGCTTCAGAACCAGATGTCA+TGG - chr3_4:58600167-58600186 None:intergenic 50.0%
!! CTGGTTCTGAAGCCGTTTCA+TGG + chr3_4:58600173-58600192 Msa0509950:CDS 50.0%
TGCTGGTCATACTGGTAGGT+CGG - chr3_4:58600238-58600257 None:intergenic 50.0%
CCATCTTGAACGCTTCCTAC+GGG - chr3_4:58600277-58600296 None:intergenic 50.0%
CCATATGGTTATGGCAGCAC+GGG + chr3_4:58600397-58600416 Msa0509950:CDS 50.0%
CCTACAGGCTGAGAATAAGC+AGG - chr3_4:58600466-58600485 None:intergenic 50.0%
CCTGCTTATTCTCAGCCTGT+AGG + chr3_4:58600463-58600482 Msa0509950:CDS 50.0%
CCAGTGGTCTGATAATCAGC+AGG - chr3_4:58600589-58600608 None:intergenic 50.0%
! CCTGCTGATTATCAGACCAC+TGG + chr3_4:58600586-58600605 Msa0509950:CDS 50.0%
GCTGATTATCAGACCACTGG+AGG + chr3_4:58600589-58600608 Msa0509950:CDS 50.0%
!!! GCTGTTTTGGTAACCTCCAG+TGG - chr3_4:58600605-58600624 None:intergenic 50.0%
! GGGCACAACTGACTTCTGTT+TGG - chr3_4:58600798-58600817 None:intergenic 50.0%
AGACAAGTTCTCTGTCCCTG+GGG - chr3_4:58600818-58600837 None:intergenic 50.0%
CAGACAAGTTCTCTGTCCCT+GGG - chr3_4:58600819-58600838 None:intergenic 50.0%
ACAGACAAGTTCTCTGTCCC+TGG - chr3_4:58600820-58600839 None:intergenic 50.0%
GCATAACCACTAGTAGCTGC+AGG - chr3_4:58600886-58600905 None:intergenic 50.0%
GTGGATATGATTGTGGAGGC+TGG - chr3_4:58600921-58600940 None:intergenic 50.0%
CAGCCTGCTGCAGTAAATAG+TGG + chr3_4:58601290-58601309 Msa0509950:intron 50.0%
CCACCACTATTTACTGCAGC+AGG - chr3_4:58601296-58601315 None:intergenic 50.0%
CCTGCTGCAGTAAATAGTGG+TGG + chr3_4:58601293-58601312 Msa0509950:CDS 50.0%
ATGCAGAGGTCTACGAGACT+AGG + chr3_4:58602353-58602372 Msa0509950:intron 50.0%
!! GAGGTCTGGCCTTAGTGAAA+TGG + chr3_4:58602402-58602421 Msa0509950:intron 50.0%
TAAGCAAATGGCAGCATGCC+AGG + chr3_4:58603166-58603185 Msa0509950:CDS 50.0%
ATGCCAGGCTGTCATGAAAG+AGG + chr3_4:58603181-58603200 Msa0509950:CDS 50.0%
TCACCTCTTTCATGACAGCC+TGG - chr3_4:58603187-58603206 None:intergenic 50.0%
GAACGATTCAAACTGGGCTC+TGG - chr3_4:58604118-58604137 None:intergenic 50.0%
GTGACATGTCAACTCGGAGA+AGG - chr3_4:58604593-58604612 None:intergenic 50.0%
TCAATTCAGACGGTCTGGAG+GGG + chr3_4:58604778-58604797 Msa0509950:intron 50.0%
GTTGGGTGATTAGAGGAGCA+GGG - chr3_4:58605082-58605101 None:intergenic 50.0%
AGTTGGGTGATTAGAGGAGC+AGG - chr3_4:58605083-58605102 None:intergenic 50.0%
! GACACAGGATGATGGTCAAC+CGG - chr3_4:58605431-58605450 None:intergenic 50.0%
! ACAGGATGATGGTTAACCGG+CGG - chr3_4:58605491-58605510 None:intergenic 50.0%
!! TCTATGTTGGCTCCTGGGTT+TGG + chr3_4:58606325-58606344 Msa0509950:intron 50.0%
CCCACTCAAACAGAACATGG+AGG - chr3_4:58606399-58606418 None:intergenic 50.0%
GCTTATCCTTGACCTCAGAG+GGG + chr3_4:58606823-58606842 Msa0509950:intron 50.0%
CTTATCCTTGACCTCAGAGG+GGG + chr3_4:58606824-58606843 Msa0509950:intron 50.0%
!! TTATACCCCCTCTGAGGTCA+AGG - chr3_4:58606832-58606851 None:intergenic 50.0%
AGAGCAAGGAAGACAGTTGG+AGG + chr3_4:58606992-58607011 Msa0509950:CDS 50.0%
! TGGTGTCAGCAAAGCTGTTG+AGG + chr3_4:58607353-58607372 Msa0509950:CDS 50.0%
!! TACTGTAAAGGGTACCTGCC+AGG + chr3_4:58607395-58607414 Msa0509950:CDS 50.0%
AGATTCTACCTAGAACCGGG+TGG + chr3_4:58608284-58608303 Msa0509950:intron 50.0%
TTGCTCGAGAGGAGGGAAAT+AGG - chr3_4:58608553-58608572 None:intergenic 50.0%
AGCAAAGTCAGTGTCAGTCC+CGG + chr3_4:58608726-58608745 Msa0509950:intron 50.0%
CACAACTGCAATCCAAGACC+GGG - chr3_4:58608747-58608766 None:intergenic 50.0%
TTTCCCATCCTTGCGCAACT+AGG - chr3_4:58608870-58608889 None:intergenic 50.0%
TGCTGAGCTACACCTACGAA+CGG - chr3_4:58608944-58608963 None:intergenic 50.0%
TTCGTAGGTGTAGCTCAGCA+TGG + chr3_4:58608944-58608963 Msa0509950:intron 50.0%
AGGGATCGAAGGCTCGTATA+TGG + chr3_4:58609316-58609335 Msa0509950:CDS 50.0%
! CAGCCTAGGTGAAGCGTTAA+TGG + chr3_4:58609736-58609755 Msa0509950:intron 50.0%
! GCTAGTTTGGTAGCTATGGG+AGG + chr3_4:58609909-58609928 Msa0509950:intron 50.0%
GTTCGTGCAGCTGTAACTTC+AGG + chr3_4:58610210-58610229 Msa0509950:CDS 50.0%
! CCTGCATGTGCCGATCATAT+CGG + chr3_4:58610410-58610429 Msa0509950:CDS 50.0%
! GTACGGTTGGCCGATATGAT+CGG - chr3_4:58610423-58610442 None:intergenic 50.0%
ACCCGTTTCCTACGTATCTC+AGG + chr3_4:58610441-58610460 Msa0509950:CDS 50.0%
TGAGAAAGAGGCCACTGCTT+TGG + chr3_4:58610507-58610526 Msa0509950:CDS 50.0%
GGGGTTGTTGGCGAAAACGA+TGG - chr3_4:58598923-58598942 None:intergenic 55.0%
GTTCAGAGCTCCACAGCGAA+TGG + chr3_4:58600199-58600218 Msa0509950:CDS 55.0%
CGGATGCTGGTCATACTGGT+AGG - chr3_4:58600242-58600261 None:intergenic 55.0%
TCTTGAACGCTTCCTACGGG+CGG - chr3_4:58600274-58600293 None:intergenic 55.0%
!! CCCGTAGGAAGCGTTCAAGA+TGG + chr3_4:58600274-58600293 Msa0509950:CDS 55.0%
CCCGTGCTGCCATAACCATA+TGG - chr3_4:58600400-58600419 None:intergenic 55.0%
CGGATACGCAAATCAAGCGC+CGG + chr3_4:58600627-58600646 Msa0509950:CDS 55.0%
ACAGAAGTCAGTTGTGCCCC+AGG + chr3_4:58600799-58600818 Msa0509950:CDS 55.0%
CAGAAGTCAGTTGTGCCCCA+GGG + chr3_4:58600800-58600819 Msa0509950:CDS 55.0%
ATTCACCTGTTGAGGGGGAG+GGG - chr3_4:58601522-58601541 None:intergenic 55.0%
GATTCACCTGTTGAGGGGGA+GGG - chr3_4:58601523-58601542 None:intergenic 55.0%
AGATTCACCTGTTGAGGGGG+AGG - chr3_4:58601524-58601543 None:intergenic 55.0%
TCCCCCTCAACAGGTGAATC+TGG + chr3_4:58601523-58601542 Msa0509950:CDS 55.0%
GCCAGATTCACCTGTTGAGG+GGG - chr3_4:58601527-58601546 None:intergenic 55.0%
CGCCAGATTCACCTGTTGAG+GGG - chr3_4:58601528-58601547 None:intergenic 55.0%
GCGCCAGATTCACCTGTTGA+GGG - chr3_4:58601529-58601548 None:intergenic 55.0%
CTTCAGTGCTGCACTGGATG+TGG - chr3_4:58601669-58601688 None:intergenic 55.0%
GGAACCACTCTTCCCAATGC+CGG + chr3_4:58604526-58604545 Msa0509950:CDS 55.0%
TAGGTGGGAGCCATTACCAG+AGG + chr3_4:58605400-58605419 Msa0509950:CDS 55.0%
GCCATTACCAGAGGAGAAGC+CGG + chr3_4:58605409-58605428 Msa0509950:CDS 55.0%
! ACCGGCTTCTCCTCTGGTAA+TGG - chr3_4:58605413-58605432 None:intergenic 55.0%
! ATACAGTAGTTGGGTGCCGC+CGG + chr3_4:58605472-58605491 Msa0509950:CDS 55.0%
AAAGGAAGACGGCCAAACCC+AGG - chr3_4:58606340-58606359 None:intergenic 55.0%
GAATGGCATGCAGGTGGTAG+TGG + chr3_4:58606960-58606979 Msa0509950:intron 55.0%
! CAACAGAAGGGCTAGTGCTC+TGG + chr3_4:58607308-58607327 Msa0509950:CDS 55.0%
GCGATACCTGCGCCTAACAT+CGG + chr3_4:58607428-58607447 Msa0509950:CDS 55.0%
!! GATATTACGGTGGCGGGATC+TGG - chr3_4:58607456-58607475 None:intergenic 55.0%
ATGAATCGGCCTCGCCTACA+TGG + chr3_4:58607929-58607948 Msa0509950:intron 55.0%
TGAATCGGCCTCGCCTACAT+GGG + chr3_4:58607930-58607949 Msa0509950:intron 55.0%
AAAGCCTTCCCATGTAGGCG+AGG - chr3_4:58607941-58607960 None:intergenic 55.0%
TCGCCTACATGGGAAGGCTT+TGG + chr3_4:58607940-58607959 Msa0509950:intron 55.0%
CCACCAAAGCCTTCCCATGT+AGG - chr3_4:58607946-58607965 None:intergenic 55.0%
! CCTACATGGGAAGGCTTTGG+TGG + chr3_4:58607943-58607962 Msa0509950:intron 55.0%
! ACATGGGAAGGCTTTGGTGG+TGG + chr3_4:58607946-58607965 Msa0509950:intron 55.0%
ACTTGACACCACCCGGTTCT+AGG - chr3_4:58608295-58608314 None:intergenic 55.0%
GGGCCATTAACGCTTCACCT+AGG - chr3_4:58609742-58609761 None:intergenic 55.0%
! GAAGCGTTAATGGCCCCTTC+TGG + chr3_4:58609746-58609765 Msa0509950:intron 55.0%
CCGATATGATCGGCACATGC+AGG - chr3_4:58610413-58610432 None:intergenic 55.0%
ACGTAGGAAACGGGTACGGT+TGG - chr3_4:58610436-58610455 None:intergenic 55.0%
AGCAAGGTTGGCATCTCCGT+GGG - chr3_4:58610935-58610954 None:intergenic 55.0%
GCTGCGGATGCTGGTCATAC+TGG - chr3_4:58600246-58600265 None:intergenic 60.0%
!! ACGCAAATCAAGCGCCGGCA+TGG + chr3_4:58600632-58600651 Msa0509950:CDS 60.0%
CCACTAGTAGCTGCAGGAGC+AGG - chr3_4:58600880-58600899 None:intergenic 60.0%
CCTGCTCCTGCAGCTACTAG+TGG + chr3_4:58600877-58600896 Msa0509950:CDS 60.0%
TCCTGCTGTGCCGCCTTTAC+AGG + chr3_4:58600966-58600985 Msa0509950:CDS 60.0%
ACCTGTAAAGGCGGCACAGC+AGG - chr3_4:58600970-58600989 None:intergenic 60.0%
TTCACCTGTTGAGGGGGAGG+GGG - chr3_4:58601521-58601540 None:intergenic 60.0%
GGCGCCAGATTCACCTGTTG+AGG - chr3_4:58601530-58601549 None:intergenic 60.0%
AGCAGGCTTCAGTGCTGCAC+TGG - chr3_4:58601675-58601694 None:intergenic 60.0%
TCTCTGGTCATCAGCCAGCC+AGG + chr3_4:58604296-58604315 Msa0509950:intron 60.0%
ACCACTCTTCCCAATGCCGG+AGG + chr3_4:58604529-58604548 Msa0509950:CDS 60.0%
CTGCATCTGCCTCCGGCATT+GGG - chr3_4:58604541-58604560 None:intergenic 60.0%
TCTGCATCTGCCTCCGGCAT+TGG - chr3_4:58604542-58604561 None:intergenic 60.0%
! TGGTCAACCGGCTTCTCCTC+TGG - chr3_4:58605419-58605438 None:intergenic 60.0%
AACTCATGCCCGGTTGGCAC+TGG + chr3_4:58608049-58608068 Msa0509950:CDS 60.0%
CCCAACTTCCAGTGCCAACC+GGG - chr3_4:58608060-58608079 None:intergenic 60.0%
! CCCGGTTGGCACTGGAAGTT+GGG + chr3_4:58608057-58608076 Msa0509950:CDS 60.0%
CCCCAACTTCCAGTGCCAAC+CGG - chr3_4:58608061-58608080 None:intergenic 60.0%
! CCGGTTGGCACTGGAAGTTG+GGG + chr3_4:58608058-58608077 Msa0509950:CDS 60.0%
GTCAGTGTCAGTCCCGGTCT+TGG + chr3_4:58608732-58608751 Msa0509950:intron 60.0%
GCGTTAATGGCCCCTTCTGG+TGG + chr3_4:58609749-58609768 Msa0509950:intron 60.0%
AGCTATGGGAGGGGCCCTTA+AGG + chr3_4:58609920-58609939 Msa0509950:intron 60.0%
GCCAGAGCCAGAAGATGCTG+TGG + chr3_4:58610909-58610928 Msa0509950:CDS 60.0%
!! GCCACAGCATCTTCTGGCTC+TGG - chr3_4:58610913-58610932 None:intergenic 60.0%
CCAGAAGATGCTGTGGCCCA+CGG + chr3_4:58610916-58610935 Msa0509950:CDS 60.0%
CAGCAAGGTTGGCATCTCCG+TGG - chr3_4:58610936-58610955 None:intergenic 60.0%
GCAGGAGCAGGAGCAGGAAC+AGG - chr3_4:58600868-58600887 None:intergenic 65.0%
GTAGCTGCAGGAGCAGGAGC+AGG - chr3_4:58600874-58600893 None:intergenic 65.0%
GAGGGGGAGGAGGAGGAAGA+GGG - chr3_4:58601505-58601524 None:intergenic 65.0%
! GCCTCCGGCATTGGGAAGAG+TGG - chr3_4:58604533-58604552 None:intergenic 65.0%
!! CGGGATCTGGCGCCGATGTT+AGG - chr3_4:58607443-58607462 None:intergenic 65.0%
TCGGCCTCGCCTACATGGGA+AGG + chr3_4:58607934-58607953 Msa0509950:intron 65.0%
! GCCCGGTTGGCACTGGAAGT+TGG + chr3_4:58608056-58608075 Msa0509950:CDS 65.0%
CCGTGGGCCACAGCATCTTC+TGG - chr3_4:58610919-58610938 None:intergenic 65.0%
ACGCTTCCTACGGGCGGCTG+CGG - chr3_4:58600268-58600287 None:intergenic 70.0%
! AGGCGGCACAGCAGGAGTGC+TGG - chr3_4:58600962-58600981 None:intergenic 70.0%
GGAGGGGGAGGAGGAGGAAG+AGG - chr3_4:58601506-58601525 None:intergenic 70.0%
TGTTGAGGGGGAGGGGGAGG+AGG - chr3_4:58601515-58601534 None:intergenic 70.0%
TCCTCCCCCTCCCCCTCAAC+AGG + chr3_4:58601514-58601533 Msa0509950:CDS 70.0%
ACCTGTTGAGGGGGAGGGGG+AGG - chr3_4:58601518-58601537 None:intergenic 70.0%
!! CTGGCGCCGATGTTAGGCGC+AGG - chr3_4:58607437-58607456 None:intergenic 70.0%
TGAGGGGGAGGGGGAGGAGG+AGG - chr3_4:58601512-58601531 None:intergenic 75.0%
! GCGGCTGCGGCTGCGGATGC+TGG - chr3_4:58600255-58600274 None:intergenic 80.0%
! CCTACGGGCGGCTGCGGCTG+CGG - chr3_4:58600262-58600281 None:intergenic 80.0%
! CCGCAGCCGCAGCCGCCCGT+AGG + chr3_4:58600259-58600278 Msa0509950:CDS 85.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 58598811 58611270 58598811 ID=Msa0509950;Name=Msa0509950
chr3_4 mRNA 58598811 58611270 58598811 ID=Msa0509950-mRNA-1;Parent=Msa0509950;Name=Msa0509950-mRNA-1;_AED=0.05;_eAED=0.05;_QI=599|1|0.92|1|0.91|0.84|13|283|1011
chr3_4 exon 58598811 58599362 58598811 ID=Msa0509950-mRNA-1:exon:13614;Parent=Msa0509950-mRNA-1
chr3_4 exon 58600119 58600987 58600119 ID=Msa0509950-mRNA-1:exon:13615;Parent=Msa0509950-mRNA-1
chr3_4 exon 58601293 58601766 58601293 ID=Msa0509950-mRNA-1:exon:13616;Parent=Msa0509950-mRNA-1
chr3_4 exon 58603101 58603202 58603101 ID=Msa0509950-mRNA-1:exon:13617;Parent=Msa0509950-mRNA-1
chr3_4 exon 58604473 58604570 58604473 ID=Msa0509950-mRNA-1:exon:13618;Parent=Msa0509950-mRNA-1
chr3_4 exon 58605331 58605571 58605331 ID=Msa0509950-mRNA-1:exon:13619;Parent=Msa0509950-mRNA-1
chr3_4 exon 58606973 58607467 58606973 ID=Msa0509950-mRNA-1:exon:13620;Parent=Msa0509950-mRNA-1
chr3_4 exon 58607571 58607711 58607571 ID=Msa0509950-mRNA-1:exon:13621;Parent=Msa0509950-mRNA-1
chr3_4 exon 58608041 58608100 58608041 ID=Msa0509950-mRNA-1:exon:13622;Parent=Msa0509950-mRNA-1
chr3_4 exon 58609284 58609414 58609284 ID=Msa0509950-mRNA-1:exon:13623;Parent=Msa0509950-mRNA-1
chr3_4 exon 58610161 58610294 58610161 ID=Msa0509950-mRNA-1:exon:13624;Parent=Msa0509950-mRNA-1
chr3_4 exon 58610374 58610609 58610374 ID=Msa0509950-mRNA-1:exon:13625;Parent=Msa0509950-mRNA-1
chr3_4 exon 58610886 58611270 58610886 ID=Msa0509950-mRNA-1:exon:13626;Parent=Msa0509950-mRNA-1
chr3_4 five_prime_UTR 58598811 58599362 58598811 ID=Msa0509950-mRNA-1:five_prime_utr;Parent=Msa0509950-mRNA-1
chr3_4 five_prime_UTR 58600119 58600165 58600119 ID=Msa0509950-mRNA-1:five_prime_utr;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58600166 58600987 58600166 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58601293 58601766 58601293 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58603101 58603202 58603101 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58604473 58604570 58604473 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58605331 58605571 58605331 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58606973 58607467 58606973 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58607571 58607711 58607571 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58608041 58608100 58608041 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58609284 58609414 58609284 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58610161 58610294 58610161 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58610374 58610609 58610374 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 CDS 58610886 58610987 58610886 ID=Msa0509950-mRNA-1:cds;Parent=Msa0509950-mRNA-1
chr3_4 three_prime_UTR 58610988 58611270 58610988 ID=Msa0509950-mRNA-1:three_prime_utr;Parent=Msa0509950-mRNA-1
Gene Sequence

>Msa0509950

ATGACATCTGGTTCTGAAGCCGTTTCATGGAACGTTCAGAGCTCCACAGCGAATGGAATTTATTCTAATCCGACCTACCAGTATGACCAGCATCCGCAGCCGCAGCCGCCCGTAGGAAGCGTTCAAGATGGTCAAAGTGTATCATCAGTTGCTGGTAATTCATCAAATTTGGGAACAGCTAATGCACCACAAGATTATAATGCATACGCATCATATGCAAATTCTTCTAATCCATATGGTTATGGCAGCACGGGATACTCAGACTACTATAACAGCTATCAGCAGCAGCAACCTAATCCTGCTTATTCTCAGCCTGTAGGAGCATATCAAAATACAGGTGCTCCTTATCAGCCTATTTCCTCCTTTCAGAATACTGGGTCTAATGCTGGATCCGCAAGTTATTCAAGCACTTATTACAATCCTGCTGATTATCAGACCACTGGAGGTTACCAAAACAGCAACGGATACGCAAATCAAGCGCCGGCATGGAACAATGACAGTTATTCAAGCTATGCCTCTCATCCGTATACAAGTTACGCCACAGATTCCAGTAGCTCTTATAGTACTGGTGCTGCAGCTACTTCCGTGCAGTATCAGCCACAATACAATCAATGGGCGGACTATTACAGCCAAACAGAAGTCAGTTGTGCCCCAGGGACAGAGAACTTGTCTGTCCCAAGTTCATCTACTTTGGGTTGTCCTGTTCCTGCTCCTGCTCCTGCAGCTACTAGTGGTTATGCACCTTCAAATTACCAGCCTCCACAATCATATCCACAATATTGGGTGCAAGAGTCCAGCACTCCTGCTGTGCCGCCTTTACAGCCTGCTGCAGTAAATAGTGGTGGTCATGATGATTACTGGAAACATGGCGCCCAAACTAGTTCTCAAATTCATCAAACTAGTTCTCAAATTCACCAAACTAATCCTATTCAACCAAACTATCAAAGTCATTTGGATTTAAATTCTTCTTATGATAAATTTCAGGATCAACAACAGAAGACAGTATCTTCTCAAGGAACCAATTTGTACTTCCCTCTTCCTCCTCCTCCCCCTCCCCCTCAACAGGTGAATCTGGCGCCCTTACAAAGTGCTCCATCTTTGGATACAAAACGAGTAAACAAGCTTCAGATTCCAACAAATCCTCGAATTGCTTCAAATTTGACATATGAACAACCTAAGCCCGAAAAAGATAGCTCCACATCCAGTGCAGCACTGAAGCCTGCTTATATTGCTGTTTCATTGACAAAACCAACTGAGAAACTATCATCTAATGATGCTGCTAATTCAATACTTAAGCCCGGTATGTTTCCCAAGTCTTTGCGTGGCTATGTTGAAAGAGCTTTGGCTCGTTGTAAAGATGATAAGCAAATGGCAGCATGCCAGGCTGTCATGAAAGAGATGATCACTAAGGCTACAGCTGATTGTACCCTATGCACACGTAATTGGGATATGGAACCACTCTTCCCAATGCCGGAGGCAGATGCAGACAATAAAGATAATTCACTGTCTTCAAGCCATGATTCTGTATTGCCAAAGTCTAGAAAAAGTCCTAGACGATCTAAAAGTAGGTGGGAGCCATTACCAGAGGAGAAGCCGGTTGACCATCATCCTGTGTCAACAAGTAATGATACTGTAAAATACAGTAGTTGGGTGCCGCCGGTTAACCATCATCCTGTGTCAACAAGTAATGATACTGTAAAATACAGTAGTTGGGTGCCTAATGAAAAGGATAGAAAGGTGGTAGTGGAAAACAAAGAGAGCAAGGAAGACAGTTGGAGGAATACAAAATTTTCTCCATTATTTCAGAGAATATCGAGTAAAGCTCCCCAAAGGCCATTTAAGAAGCAGCGTCTTGCTGATGTTTCTACTGCTCATGAAAATGGTGATGCATCTAGTGATAGTGATAAGGAACAAAGTTTGACTGCATATTATTCTGCTGCAATGGCTTTTAATGATACACCAGAGGAAAAGAAAAGACGTGAAAGTCGTTCTAAGCGATTTGATTTAGGACAAGCACAACGAACAGAAAATAATCACTCAAGGAAAAAAAATGCTAGAGCTGGAAACTTGTACAACAGAAGGGCTAGTGCTCTGGTGCTTAGCAAAAGCTTTGATAATGGTGTCAGCAAAGCTGTTGAGGATATTGACTGGGATGCTCTTACTGTAAAGGGTACCTGCCAGGAAATTGAAAAGCGATACCTGCGCCTAACATCGGCGCCAGATCCCGCCACCGTAAGACCTGAAGATGTTCTTGAAAAAGCACTATTAATGGTTCAAAATTCCCAAAGGAATTACCTTTATAAATGTGACCAGTTAAAGTCTATTCGCCAAGACCTAACTGTGCAACGAATACACAACCAATTAACAGTCAAGGTATATGAAACTCATGCCCGGTTGGCACTGGAAGTTGGGGACCTGCCTGAATATAATCAGTGCCAATCTCAGTTAAAGGCTCTTTATGCTGAAGGGATCGAAGGCTCGTATATGGAATTTGCTGCTTACAACTTGCTTTGTGTTATAATGCATTCAAATAACTACAGAGAACTCCTATCATCAATGGCAAGGTTATCTGACGAAGCAAAGAAGGATGAAGCTGTAAAACATGCTCTGGCAGTTCGTGCAGCTGTAACTTCAGGAAATTATGTTGCGTTCTTTAGATTGTACAAAGCAGCTCCGAACTTAAACACCTGCCTTATGGATCTATATGTCGAAAAGATGCGTTATAAAGCTGTGACCTGCATGTGCCGATCATATCGGCCAACCGTACCCGTTTCCTACGTATCTCAGGTTCTAGGATTCTCATCTGTCGTTGTCACAAATGAAGCAAATGATGAGAAAGAGGCCACTGCTTTGGAAGAGTGTTTAGAATGGTTGAAAGCTCATGGTGCCAGTATAATTGCTGATAACAATGGAGACATGATGGTTGATACAAAAGTTTCATCCTCTAGTTTATTTGTGCCAGAGCCAGAAGATGCTGTGGCCCACGGAGATGCCAACCTTGCTGTTAATGATTTTTTAGCAAAGGCACCTTTATAG
Protein sequence

>Msa0509950

MTSGSEAVSWNVQSSTANGIYSNPTYQYDQHPQPQPPVGSVQDGQSVSSVAGNSSNLGTANAPQDYNAYASYANSSNPYGYGSTGYSDYYNSYQQQQPNPAYSQPVGAYQNTGAPYQPISSFQNTGSNAGSASYSSTYYNPADYQTTGGYQNSNGYANQAPAWNNDSYSSYASHPYTSYATDSSSSYSTGAAATSVQYQPQYNQWADYYSQTEVSCAPGTENLSVPSSSTLGCPVPAPAPAATSGYAPSNYQPPQSYPQYWVQESSTPAVPPLQPAAVNSGGHDDYWKHGAQTSSQIHQTSSQIHQTNPIQPNYQSHLDLNSSYDKFQDQQQKTVSSQGTNLYFPLPPPPPPPQQVNLAPLQSAPSLDTKRVNKLQIPTNPRIASNLTYEQPKPEKDSSTSSAALKPAYIAVSLTKPTEKLSSNDAANSILKPGMFPKSLRGYVERALARCKDDKQMAACQAVMKEMITKATADCTLCTRNWDMEPLFPMPEADADNKDNSLSSSHDSVLPKSRKSPRRSKSRWEPLPEEKPVDHHPVSTSNDTVKYSSWVPPVNHHPVSTSNDTVKYSSWVPNEKDRKVVVENKESKEDSWRNTKFSPLFQRISSKAPQRPFKKQRLADVSTAHENGDASSDSDKEQSLTAYYSAAMAFNDTPEEKKRRESRSKRFDLGQAQRTENNHSRKKNARAGNLYNRRASALVLSKSFDNGVSKAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPATVRPEDVLEKALLMVQNSQRNYLYKCDQLKSIRQDLTVQRIHNQLTVKVYETHARLALEVGDLPEYNQCQSQLKALYAEGIEGSYMEFAAYNLLCVIMHSNNYRELLSSMARLSDEAKKDEAVKHALAVRAAVTSGNYVAFFRLYKAAPNLNTCLMDLYVEKMRYKAVTCMCRSYRPTVPVSYVSQVLGFSSVVVTNEANDEKEATALEECLEWLKAHGASIIADNNGDMMVDTKVSSSSLFVPEPEDAVAHGDANLAVNDFLAKAPL*