AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1135800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1135800 MtrunA17_Chr7g0217251 77.043 514 37 4 1 514 197 629 0.0 745
Msa1135800 MtrunA17_Chr5g0396101 74.104 251 28 2 198 411 2 252 9.17e-110 334
Msa1135800 MtrunA17_Chr5g0396111 59.848 132 38 2 30 161 241 357 7.94e-37 140
Msa1135800 MtrunA17_Chr7g0217261 54.198 131 42 1 8 120 105 235 4.24e-30 125
Msa1135800 MtrunA17_Chr7g0217261 58.779 131 30 5 1 110 137 264 2.53e-28 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1135800 AT1G33680.1 43.694 222 88 9 83 301 302 489 1.00e-32 134
Msa1135800 AT4G10070.1 33.179 431 175 19 30 425 232 584 1.57e-29 124

Find 276 sgRNAs with CRISPR-Local

Find 596 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAATTTGAAGGATCTTT+TGG 0.224942 7_4:+3545231 Msa1135800:five_prime_UTR
AGGAAAATGATCACCCATTA+TGG 0.257208 7_4:-3545183 None:intergenic
ACCAGGCGAGATTCCGTATC+AGG 0.257233 7_4:+3550384 Msa1135800:CDS
ACCAGGCGAGATTCCGTATC+AGG 0.257233 7_4:+3550753 Msa1135800:CDS
CAGTTTCTCACTTTCTCATT+TGG 0.272778 7_4:-3545988 None:intergenic
TTGAATTTCACCCCTACTTA+TGG 0.274326 7_4:+3542957 Msa1135800:five_prime_UTR
GAAATTTCAAACTTCTCATT+TGG 0.295325 7_4:-3545871 None:intergenic
ATGTTGTACCTAGGTAATTC+TGG 0.295808 7_4:-3543095 None:intergenic
TTTCAGCATGATACTTCTTC+TGG 0.297812 7_4:+3543782 Msa1135800:five_prime_UTR
TCATATGCACCTACTCCTTA+TGG 0.300051 7_4:+3549947 Msa1135800:CDS
AGTCCTTTCTTTAGAATCAT+AGG 0.302694 7_4:-3546548 None:intergenic
CTCCCCTGCTCGGGCTATCA+TGG 0.308630 7_4:+3545822 Msa1135800:CDS
GAAAGGACTGTCCAAGTTAC+TGG 0.320619 7_4:+3546804 Msa1135800:CDS
TTCTTTAGAATCATAGGCTT+CGG 0.321632 7_4:-3546542 None:intergenic
TTCTTTAGAATCATCGGCTT+CGG 0.324296 7_4:-3546784 None:intergenic
CCAAGGAGCAGTTACGGTTC+TGG 0.331193 7_4:+3549992 Msa1135800:CDS
TAATTGTAATTAATCTGAAC+TGG 0.332620 7_4:-3550190 None:intergenic
AAGTTTATCACCTTCTCATT+TGG 0.340261 7_4:-3545427 None:intergenic
ATAAGGACCGGTACAGTGTT+GGG 0.343519 7_4:-3550143 None:intergenic
GATCTGGTGGTCCACCACTA+TGG 0.343715 7_4:+3549846 Msa1135800:CDS
AGTTGTTCAATTGATTTAGA+TGG 0.351055 7_4:-3543734 None:intergenic
GGTCAGCAAGGTTCACATTA+TGG 0.354937 7_4:+3549869 Msa1135800:CDS
TATGGCAGGCCACCATTGTT+TGG 0.373347 7_4:+3550427 Msa1135800:CDS
TATGGCAGGCCACCATTGTT+TGG 0.373347 7_4:+3550673 Msa1135800:CDS
TATGGCTGGCCACCATTGTT+TGG 0.373477 7_4:+3550550 Msa1135800:CDS
GAAAGGACTGTCCAAGTTAC+CGG 0.378792 7_4:+3546562 Msa1135800:CDS
TCTTTAGAATCATAGGCTTC+GGG 0.378807 7_4:-3546541 None:intergenic
TCTTTAGAATCATCGGCTTC+GGG 0.381660 7_4:-3546783 None:intergenic
CGCCTGGTTGAGTGGCTCTA+GGG 0.386919 7_4:-3550492 None:intergenic
CGCCTGGTTGAGTGGCTCTA+GGG 0.386919 7_4:-3550615 None:intergenic
CGCCTGGTTGAGTGGCTCTA+GGG 0.386919 7_4:-3550738 None:intergenic
CTGTGAACATGGCATCCATT+AGG 0.387204 7_4:-3545276 None:intergenic
CTCCCCTGCTCAGGCTATTG+TGG 0.387651 7_4:+3545939 Msa1135800:CDS
CTCCTCAACGAGAATCTCTT+TGG 0.388726 7_4:-3543711 None:intergenic
CTCAAGACCTCTCCCCTGCT+CGG 0.391310 7_4:+3545812 Msa1135800:CDS
AACGAGAATCTCTTTGGTAT+TGG 0.395832 7_4:-3543705 None:intergenic
AATTGAGGTTCCTAGCAATA+AGG 0.397890 7_4:+3543850 Msa1135800:five_prime_UTR
AAGGCCTCACCAGAGTTTGC+AGG 0.398717 7_4:+3550024 Msa1135800:CDS
GCCTCTTATCACCGGTAACT+TGG 0.398801 7_4:-3546573 None:intergenic
AGGGGCCGCCCTCACACAAC+AGG 0.399074 7_4:+3550044 Msa1135800:CDS
AATTGAAATTGCACAAGAAA+TGG 0.400768 7_4:+3546597 Msa1135800:CDS
ACTTATGGCCGAAGAAGAAT+TGG 0.406832 7_4:+3542972 Msa1135800:five_prime_UTR
GGACAAAAGCAACCTATATC+CGG 0.410409 7_4:+3543803 Msa1135800:five_prime_UTR
ATCTGGTGGTCCACCACTAT+GGG 0.410501 7_4:+3549847 Msa1135800:CDS
TCCCCTGCTCAGGCTATTGT+GGG 0.411748 7_4:+3545940 Msa1135800:CDS
AAGGACAACATCCAGTCTTA+TGG 0.414360 7_4:+3550833 Msa1135800:CDS
CATGCACCTCCACAGCAGTA+TGG 0.418104 7_4:+3550286 Msa1135800:CDS
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_4:-3550370 None:intergenic
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_4:-3550493 None:intergenic
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_4:-3550616 None:intergenic
TCGCCTGGTTGAGTGGCTCT+AGG 0.418678 7_4:-3550739 None:intergenic
AACAACAACCAATTCTTCTT+CGG 0.421576 7_4:-3542980 None:intergenic
GCCTCTTATCACCAGTAACT+TGG 0.424651 7_4:-3546815 None:intergenic
AACAGGGGTTATGATCATTA+TGG 0.425468 7_4:+3550061 Msa1135800:CDS
TTGCTTGAGCCCAGGCTTGA+GGG 0.427950 7_4:-3550261 None:intergenic
ATATGAGTTCGAAAACCTAA+TGG 0.435925 7_4:+3545261 Msa1135800:exon
CTGAACTGGGGATGGACCTA+TGG 0.446415 7_4:-3550176 None:intergenic
TACCGTCCGCCACAAGGATC+TGG 0.447453 7_4:+3549830 Msa1135800:CDS
GATTGATTATGAGAGGGATA+TGG 0.448365 7_4:-3549926 None:intergenic
CTTTAAGGAGTTCAATTTGA+AGG 0.450357 7_4:+3545222 Msa1135800:five_prime_UTR
CATGGCAGGCCACCATTGTA+TGG 0.454068 7_4:+3550796 Msa1135800:CDS
TTCTTCTTCGGCCATAAGTA+GGG 0.455316 7_4:-3542968 None:intergenic
TTCAATTTGCCTCTTATCAC+CGG 0.455487 7_4:-3546581 None:intergenic
GAAATTTCACAGGCTGATGC+TGG 0.455531 7_4:+3545886 Msa1135800:CDS
GAAATTCCACAGGCTGATGC+TGG 0.457417 7_4:+3545382 Msa1135800:intron
TAGGGTGGCCGCCATAAGAC+TGG 0.458568 7_4:-3550844 None:intergenic
GGCAAAGGAAGCCTTGAGTC+AGG 0.459926 7_4:+3546618 Msa1135800:CDS
GACAAAGGAAGCCTTGAGTC+AGG 0.459926 7_4:+3546860 Msa1135800:CDS
ATTCTTCTTCGGCCATAAGT+AGG 0.460818 7_4:-3542969 None:intergenic
GCCAGAGGAAAATGCTCATT+CGG 0.461954 7_4:+3543631 Msa1135800:five_prime_UTR
GGGGATAGAACTGGGATGCG+GGG 0.462876 7_4:-3550122 None:intergenic
TATGGAAAGCCACCATTGTA+TGG 0.466268 7_4:+3550304 Msa1135800:CDS
TGATCATTATGGTGGACAAA+GGG 0.467199 7_4:+3550072 Msa1135800:CDS
GAGCAGTTACGGTTCTGGTT+GGG 0.467510 7_4:+3549997 Msa1135800:CDS
TCGAGGCCTCTCCCCTGCTC+AGG 0.468246 7_4:+3545930 Msa1135800:CDS
TGGAAATTATCCTCAACATA+TGG 0.468726 7_4:+3549967 Msa1135800:CDS
CCTCCATATGGATATTGTGC+AGG 0.471773 7_4:-3550226 None:intergenic
CCCTGATACGGAATCTCGCC+TGG 0.475637 7_4:-3550385 None:intergenic
CCCTGATACGGAATCTCGCC+TGG 0.475637 7_4:-3550754 None:intergenic
GGACAACATCCAGAGTCTTA+TGG 0.475815 7_4:+3550466 Msa1135800:CDS
GGACAACATCCAGAGTCTTA+TGG 0.475815 7_4:+3550589 Msa1135800:CDS
GGACAACATCCAGAGTCTTA+TGG 0.475815 7_4:+3550712 Msa1135800:CDS
TCCCCTGCTCGGGCTATCAT+GGG 0.476995 7_4:+3545823 Msa1135800:CDS
TGCATGATTTGCTTGAGCCC+AGG 0.477587 7_4:-3550269 None:intergenic
TAAAGATAATTCAGAAGAAA+CGG 0.480498 7_4:+3543673 Msa1135800:five_prime_UTR
TCCAAGTTACCGGTGATAAG+AGG 0.482256 7_4:+3546572 Msa1135800:CDS
GGCCTGCCATGTGATTGTGC+TGG 0.483736 7_4:-3550784 None:intergenic
TCATTTGGAACTTCACGTGC+AGG 0.483750 7_4:-3545412 None:intergenic
TCTACTCCAGCACAATCATA+TGG 0.485163 7_4:+3550532 Msa1135800:CDS
GATAGAACTGGGATGCGGGG+CGG 0.486930 7_4:-3550119 None:intergenic
TGAGAAGTTTGAAATTTCAC+AGG 0.487355 7_4:+3545876 Msa1135800:CDS
GAAATTTCACAGGACGATGA+TGG 0.489129 7_4:+3545769 Msa1135800:intron
CCAGAACCGTAACTGCTCCT+TGG 0.490935 7_4:-3549992 None:intergenic
AGTCCTTTCTTTAGAATCAT+CGG 0.492156 7_4:-3546790 None:intergenic
GCCCAGGCTTGAGGGTAGGT+TGG 0.492941 7_4:-3550253 None:intergenic
GTTGTGTCAGACCCGGATAT+AGG 0.494557 7_4:-3543815 None:intergenic
TAGCCTGTCAAGTCATCATC+AGG 0.494848 7_4:+3549788 Msa1135800:intron
ATCCAACCTACCCTCAAGCC+TGG 0.495983 7_4:+3550251 Msa1135800:CDS
AGGGCGGCCCCTGCAAACTC+TGG 0.497694 7_4:-3550033 None:intergenic
GTATCTAACCTCTGCACTCA+TGG 0.499696 7_4:-3545674 None:intergenic
TCAAGACCTCTCCCCTGCTC+GGG 0.499866 7_4:+3545813 Msa1135800:CDS
CGCCTGGTTGAGTGGCTCTA+GGG 0.500281 7_4:-3550369 None:intergenic
TGTTGAGGATAATTTCCATA+AGG 0.501436 7_4:-3549962 None:intergenic
ATCAGGTGGTTTCAGACAGC+AGG 0.502199 7_4:+3549805 Msa1135800:CDS
GATCCCACAATAGCCTGAGC+AGG 0.502943 7_4:-3545943 None:intergenic
TCCAAGTTACTGGTGATAAG+AGG 0.505553 7_4:+3546814 Msa1135800:CDS
TCTACTCCAGCACAATCATA+TGG 0.505828 7_4:+3550409 Msa1135800:CDS
TCTACTCCAGCACAATCATA+TGG 0.505828 7_4:+3550655 Msa1135800:CDS
GCCTGGTTGAGTGGCTCTAG+GGG 0.506058 7_4:-3550491 None:intergenic
GCCTGGTTGAGTGGCTCTAG+GGG 0.506058 7_4:-3550614 None:intergenic
GCCTGGTTGAGTGGCTCTAG+GGG 0.506058 7_4:-3550737 None:intergenic
CCTATGGAGGGTAAAGGATA+AGG 0.506258 7_4:-3550160 None:intergenic
AAGCCTATGATTCTAAAGAA+AGG 0.506362 7_4:+3546545 Msa1135800:CDS
CCATGATACGGAATCTCGCC+TGG 0.509473 7_4:-3550508 None:intergenic
CCATGATACGGAATCTCGCC+TGG 0.509473 7_4:-3550631 None:intergenic
AGATAAGGCAGAAAAGCTAT+TGG 0.511880 7_4:+3545648 Msa1135800:CDS
GATCCCATGATAGCCCGAGC+AGG 0.516227 7_4:-3545826 None:intergenic
ATGGCTCCAAGGAGCAGTTA+CGG 0.518058 7_4:+3549986 Msa1135800:CDS
TGTGGATGCTGCCCTTGTGA+AGG 0.518910 7_4:-3550334 None:intergenic
CCAGGCGAGATTCCGTATCA+TGG 0.519439 7_4:+3550508 Msa1135800:CDS
CCAGGCGAGATTCCGTATCA+TGG 0.519439 7_4:+3550631 Msa1135800:CDS
CATATTACTATCAGCATCGC+TGG 0.520981 7_4:+3549903 Msa1135800:CDS
TAACAGACATGATGAAAAGA+AGG 0.521017 7_4:+3543601 Msa1135800:five_prime_UTR
AGGCCTCGAGCTACAAGTGC+AGG 0.522201 7_4:-3545916 None:intergenic
GAAGTATCATGCTGAAAGGT+GGG 0.522280 7_4:-3543776 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_4:-3550377 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_4:-3550500 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_4:-3550623 None:intergenic
CGGAATCTCGCCTGGTTGAG+TGG 0.522392 7_4:-3550746 None:intergenic
CACCCTAGAGCCACTCAACC+AGG 0.523349 7_4:+3550367 Msa1135800:CDS
TGATAGCCCGAGCAGGGGAG+AGG 0.524339 7_4:-3545819 None:intergenic
GATAAGGACCGGTACAGTGT+TGG 0.525106 7_4:-3550144 None:intergenic
GGATGTTGTCCTTGTGAAGG+TGG 0.528344 7_4:-3550454 None:intergenic
GGATGTTGTCCTTGTGAAGG+TGG 0.528344 7_4:-3550577 None:intergenic
GGATGTTGTCCTTGTGAAGG+TGG 0.528344 7_4:-3550700 None:intergenic
CCACCTGATGATGACTTGAC+AGG 0.529512 7_4:-3549791 None:intergenic
GATGTACATACCTTATTGCT+AGG 0.530908 7_4:-3543860 None:intergenic
CTCCAGCACAATCATATGGC+TGG 0.531539 7_4:+3550536 Msa1135800:CDS
AGGCCTCACCAGAGTTTGCA+GGG 0.531736 7_4:+3550025 Msa1135800:CDS
CAATAGCCTGAGCAGGGGAG+AGG 0.532008 7_4:-3545936 None:intergenic
TAATTAATCTGAACTGGGGA+TGG 0.532591 7_4:-3550184 None:intergenic
TAGGTTGGATGTCCTCCATA+TGG 0.532711 7_4:-3550238 None:intergenic
AGGTCTTGAGCTACAAATGC+AGG 0.532914 7_4:-3545799 None:intergenic
GGCCAGCCATATGATTGTGC+TGG 0.532993 7_4:-3550538 None:intergenic
ACGGTTCTGGTTGGGAGCAA+AGG 0.533493 7_4:+3550005 Msa1135800:CDS
TTTGCTTGAGCCCAGGCTTG+AGG 0.534507 7_4:-3550262 None:intergenic
GGATGCTGCCCTTGTGAAGG+TGG 0.534828 7_4:-3550331 None:intergenic
TTGAGCCCAGGCTTGAGGGT+AGG 0.542149 7_4:-3550257 None:intergenic
AGGAACCTCAATTTCTTGTG+TGG 0.543235 7_4:-3543840 None:intergenic
CCTTATCCTTTACCCTCCAT+AGG 0.543764 7_4:+3550160 Msa1135800:CDS
CTCCATATGGATATTGTGCA+GGG 0.544808 7_4:-3550225 None:intergenic
GGCCTGCCATATGATTGTGC+TGG 0.545310 7_4:-3550415 None:intergenic
GGCCTGCCATATGATTGTGC+TGG 0.545310 7_4:-3550661 None:intergenic
AAGCCGATGATTCTAAAGAA+AGG 0.546417 7_4:+3546787 Msa1135800:CDS
CTCCAGCACAATCATATGGC+AGG 0.547509 7_4:+3550413 Msa1135800:CDS
CTCCAGCACAATCATATGGC+AGG 0.547509 7_4:+3550659 Msa1135800:CDS
AGATCCTTGTGGCGGACGGT+AGG 0.547916 7_4:-3549828 None:intergenic
AGAATCTCTTTGGTATTGGT+AGG 0.550145 7_4:-3543701 None:intergenic
TGCATATGATTGATTATGAG+AGG 0.551522 7_4:-3549933 None:intergenic
AACAACCACACAAGAAATTG+AGG 0.552466 7_4:+3543835 Msa1135800:five_prime_UTR
GGCTTTCCATACTGCTGTGG+AGG 0.552499 7_4:-3550292 None:intergenic
TAAGGACCGGTACAGTGTTG+GGG 0.552946 7_4:-3550142 None:intergenic
TTCACAAGGGCAGCATCCAC+AGG 0.553792 7_4:+3550336 Msa1135800:CDS
GTATCTAACCTCTGTGAACA+TGG 0.556597 7_4:-3545287 None:intergenic
AACTGGGGATGGACCTATGG+AGG 0.556603 7_4:-3550173 None:intergenic
AATTGTAATTAATCTGAACT+GGG 0.556874 7_4:-3550189 None:intergenic
AGAAGTATCATGCTGAAAGG+TGG 0.557514 7_4:-3543777 None:intergenic
GGAGCAGTTACGGTTCTGGT+TGG 0.559653 7_4:+3549996 Msa1135800:CDS
TCCAACCTACCCTCAAGCCT+GGG 0.561080 7_4:+3550252 Msa1135800:CDS
CCTGGTTGAGTGGCTCTAGG+GGG 0.564374 7_4:-3550490 None:intergenic
CCTGGTTGAGTGGCTCTAGG+GGG 0.564374 7_4:-3550613 None:intergenic
CCTGGTTGAGTGGCTCTAGG+GGG 0.564374 7_4:-3550736 None:intergenic
GACAAAAGCAACCTATATCC+GGG 0.566158 7_4:+3543804 Msa1135800:five_prime_UTR
ATCCCATGATAGCCCGAGCA+GGG 0.569495 7_4:-3545825 None:intergenic
CTCCAGCACAATCACATGGC+AGG 0.569765 7_4:+3550782 Msa1135800:CDS
CAGGCCTACCGTCCGCCACA+AGG 0.572683 7_4:+3549824 Msa1135800:CDS
GGATGTTGTCCTTGTGAAGG+TGG 0.573281 7_4:-3550823 None:intergenic
CTCCTTGGAGCCATATGTTG+AGG 0.573692 7_4:-3549977 None:intergenic
AAAGGTGGGATCATTCGAGC+TGG 0.574288 7_4:-3543762 None:intergenic
GGCCCCTGCAAACTCTGGTG+AGG 0.583174 7_4:-3550028 None:intergenic
ATGATCATTATGGTGGACAA+AGG 0.586741 7_4:+3550071 Msa1135800:CDS
GGATAATTTCCATAAGGAGT+AGG 0.588588 7_4:-3549956 None:intergenic
TCTGGATGTTGTCCTTGTGA+AGG 0.589660 7_4:-3550457 None:intergenic
TCTGGATGTTGTCCTTGTGA+AGG 0.589660 7_4:-3550580 None:intergenic
TCTGGATGTTGTCCTTGTGA+AGG 0.589660 7_4:-3550703 None:intergenic
CACCAGATCCTTGTGGCGGA+CGG 0.592623 7_4:-3549832 None:intergenic
ATCCCACAATAGCCTGAGCA+GGG 0.592936 7_4:-3545942 None:intergenic
TTGAACTCCTTAAAGAAACA+AGG 0.594360 7_4:-3545214 None:intergenic
CTGGTTGAGTGGCTCTAGGG+GGG 0.596393 7_4:-3550489 None:intergenic
CTGGTTGAGTGGCTCTAGGG+GGG 0.596393 7_4:-3550612 None:intergenic
CTGGTTGAGTGGCTCTAGGG+GGG 0.596393 7_4:-3550735 None:intergenic
GATGGACCTATGGAGGGTAA+AGG 0.597684 7_4:-3550166 None:intergenic
GAACTTGCGCTTACAATCAG+AGG 0.601991 7_4:-3543016 None:intergenic
ATCCTCAACATATGGCTCCA+AGG 0.603445 7_4:+3549975 Msa1135800:CDS
GGTGGCTTTCCATACTGCTG+TGG 0.604041 7_4:-3550295 None:intergenic
TACCAAAGAGATTCTCGTTG+AGG 0.605338 7_4:+3543709 Msa1135800:five_prime_UTR
TCTTCTTCGGCCATAAGTAG+GGG 0.607893 7_4:-3542967 None:intergenic
AGTAAAACAAACCTGACTCA+AGG 0.609370 7_4:-3546629 None:intergenic
AGTCAAACAAACCTGACTCA+AGG 0.609370 7_4:-3546871 None:intergenic
TGTGGTTGTTGTGTCAGACC+CGG 0.609391 7_4:-3543822 None:intergenic
CCAGGCGAGATTCCGTATCA+GGG 0.609811 7_4:+3550385 Msa1135800:CDS
CCAGGCGAGATTCCGTATCA+GGG 0.609811 7_4:+3550754 Msa1135800:CDS
TTTGGCATGCCACCTTCACA+AGG 0.611493 7_4:+3550445 Msa1135800:CDS
TTTGGCATGCCACCTTCACA+AGG 0.611493 7_4:+3550568 Msa1135800:CDS
TTTGGCATGCCACCTTCACA+AGG 0.611493 7_4:+3550691 Msa1135800:CDS
CCACCACTATGGGGTCAGCA+AGG 0.612728 7_4:+3549857 Msa1135800:CDS
TCGGCTTCGGGAAGATCTTG+AGG 0.612739 7_4:-3546771 None:intergenic
TATGGCGTGCCACCTTCACA+AGG 0.616928 7_4:+3550322 Msa1135800:CDS
CGATGCTGATAGTAATATGA+TGG 0.617010 7_4:-3549899 None:intergenic
TAGGCTTCGGGAAGATGTTG+AGG 0.617094 7_4:-3546529 None:intergenic
TAACCCCTGTTGTGTGAGGG+CGG 0.617324 7_4:-3550049 None:intergenic
CTGGTTGAGTGGCTCTAGGG+TGG 0.617348 7_4:-3550366 None:intergenic
AAGGACCGGTACAGTGTTGG+GGG 0.617380 7_4:-3550141 None:intergenic
ATTTCACAGGCTGATGCTGG+AGG 0.620760 7_4:+3545889 Msa1135800:CDS
AGAAGAAGTATCATGCTGAA+AGG 0.621992 7_4:-3543780 None:intergenic
GGGGCCGCCCTCACACAACA+GGG 0.626489 7_4:+3550045 Msa1135800:CDS
GGAGGGTAAAGGATAAGGAC+CGG 0.627635 7_4:-3550155 None:intergenic
AGGGGTTATGATCATTATGG+TGG 0.627740 7_4:+3550064 Msa1135800:CDS
TCCCATGATAGCCCGAGCAG+GGG 0.628243 7_4:-3545824 None:intergenic
TGCTGATAGTAATATGATGG+TGG 0.628397 7_4:-3549896 None:intergenic
GAAGATCAACACTCTGATGA+CGG 0.628431 7_4:+3543039 Msa1135800:five_prime_UTR
ACGTGAAGTTCCAAATGAGA+AGG 0.630318 7_4:+3545417 Msa1135800:CDS
GCTGGAGTAGAACCCTGATA+CGG 0.630359 7_4:-3550397 None:intergenic
GCTGGAGTAGAACCCTGATA+CGG 0.630359 7_4:-3550766 None:intergenic
ACTGGGGATGGACCTATGGA+GGG 0.630529 7_4:-3550172 None:intergenic
CCATATGGATATTGTGCAGG+GGG 0.630768 7_4:-3550223 None:intergenic
GATGATAACCAGAATTACCT+AGG 0.632946 7_4:+3543087 Msa1135800:five_prime_UTR
AACTTGCGCTTACAATCAGA+GGG 0.633621 7_4:-3543015 None:intergenic
AAAGAAGGTTGCTGAGCCAG+AGG 0.634204 7_4:+3543616 Msa1135800:five_prime_UTR
GCATATGATTGATTATGAGA+GGG 0.634444 7_4:-3549932 None:intergenic
CTGGTTGAGTGGCTCTAGGG+TGG 0.634984 7_4:-3550859 None:intergenic
GAACCTTGCTGACCCCATAG+TGG 0.636422 7_4:-3549860 None:intergenic
CGTCCGCCACAAGGATCTGG+TGG 0.637608 7_4:+3549833 Msa1135800:CDS
TGAACTCCTTAAAGAAACAA+GGG 0.640467 7_4:-3545213 None:intergenic
AATTGCACAAGAAATGGCAA+AGG 0.641008 7_4:+3546603 Msa1135800:CDS
GATCATTATGGTGGACAAAG+GGG 0.641676 7_4:+3550073 Msa1135800:CDS
GGTGGCACGCCATACAATGG+TGG 0.642515 7_4:-3550805 None:intergenic
TCTCCTGCACTTGTAGCTCG+AGG 0.645902 7_4:+3545913 Msa1135800:CDS
ATTTCACAGGACGATGATGG+AGG 0.647200 7_4:+3545772 Msa1135800:intron
ATCATAACCCCTGTTGTGTG+AGG 0.648263 7_4:-3550053 None:intergenic
GCTGGAGTAGAACCATGATA+CGG 0.649951 7_4:-3550520 None:intergenic
GCTGGAGTAGAACCATGATA+CGG 0.649951 7_4:-3550643 None:intergenic
GGACCACCAGATCCTTGTGG+CGG 0.656693 7_4:-3549836 None:intergenic
TGGTTATCATCGTCAAGACA+AGG 0.656873 7_4:-3543075 None:intergenic
GGTGGCACGCCATACAATGG+TGG 0.659754 7_4:-3550313 None:intergenic
TATGGCGTGCCACCTTCACA+AGG 0.660463 7_4:+3550814 Msa1135800:CDS
CTAGGGTGGACATAAGCCTG+TGG 0.661544 7_4:-3550352 None:intergenic
GACAACATCCAGTCTTATGG+CGG 0.662824 7_4:+3550836 Msa1135800:CDS
TCCCACAATAGCCTGAGCAG+GGG 0.667257 7_4:-3545941 None:intergenic
GGCCTCACCAGAGTTTGCAG+GGG 0.668815 7_4:+3550026 Msa1135800:CDS
TCATAACCCCTGTTGTGTGA+GGG 0.668905 7_4:-3550052 None:intergenic
TCCATATGGATATTGTGCAG+GGG 0.669519 7_4:-3550224 None:intergenic
ATTGTAATTAATCTGAACTG+GGG 0.674544 7_4:-3550188 None:intergenic
AGAGGAAAATGCTCATTCGG+AGG 0.674893 7_4:+3543634 Msa1135800:five_prime_UTR
ACTGGATGTTGTCCTTGTGA+AGG 0.675212 7_4:-3550826 None:intergenic
CCTGCACAATATCCATATGG+AGG 0.675215 7_4:+3550226 Msa1135800:CDS
GCTGATAGTAATATGATGGT+GGG 0.679017 7_4:-3549895 None:intergenic
TCTACTCCAGCACAATCACA+TGG 0.682255 7_4:+3550778 Msa1135800:CDS
CCTTGCTGACCCCATAGTGG+TGG 0.683281 7_4:-3549857 None:intergenic
ATTGGATGCCATGAGTGCAG+AGG 0.684700 7_4:+3545666 Msa1135800:CDS
CCTGTCAAGTCATCATCAGG+TGG 0.685141 7_4:+3549791 Msa1135800:CDS
GGGCCGCCCTCACACAACAG+GGG 0.685494 7_4:+3550046 Msa1135800:CDS
AATTGCACAAGAAATGACAA+AGG 0.687203 7_4:+3546845 Msa1135800:CDS
GAAGGTGGCACGCCATACAA+TGG 0.687612 7_4:-3550316 None:intergenic
GAAGGTGGCACGCCATACAA+TGG 0.687612 7_4:-3550808 None:intergenic
GGTGGACCACCAGATCCTTG+TGG 0.688140 7_4:-3549839 None:intergenic
TCTGGTGGTCCACCACTATG+GGG 0.696904 7_4:+3549848 Msa1135800:CDS
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_4:-3550436 None:intergenic
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_4:-3550559 None:intergenic
GGTGGCATGCCAAACAATGG+TGG 0.699630 7_4:-3550682 None:intergenic
GAAGGTGGCATGCCAAACAA+TGG 0.715515 7_4:-3550439 None:intergenic
GAAGGTGGCATGCCAAACAA+TGG 0.715515 7_4:-3550562 None:intergenic
GAAGGTGGCATGCCAAACAA+TGG 0.715515 7_4:-3550685 None:intergenic
GATAGTAATATGATGGTGGG+TGG 0.723828 7_4:-3549892 None:intergenic
ATGGCGTGCCACCTTCACAA+GGG 0.726964 7_4:+3550323 Msa1135800:CDS
AATGGATGCCATGTTCACAG+AGG 0.777271 7_4:+3545279 Msa1135800:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATATAATTTATGAAAT+GGG - chr7_4:3546193-3546212 None:intergenic 10.0%
!! ATGAAATATAATTTATGAAA+TGG - chr7_4:3546194-3546213 None:intergenic 10.0%
!!! TAAAAATATTTAATTGACTT+TGG - chr7_4:3547610-3547629 None:intergenic 10.0%
!!! AAAGTCAATTAAATATTTTT+AGG + chr7_4:3547609-3547628 Msa1135800:intron 10.0%
!!! TGTTAAGTAAATTTTAATTA+AGG + chr7_4:3548079-3548098 Msa1135800:intron 10.0%
!! TATAATACAAAACAATATAA+TGG - chr7_4:3548444-3548463 None:intergenic 10.0%
!!! TGTTAAGTAAATTTTAATTA+AGG - chr7_4:3548079-3548098 None:intergenic 10.0%
!!! ATAAGTTATAAGCTTTTATA+AGG + chr7_4:3543237-3543256 Msa1135800:intron 15.0%
!!! GTTTTTTGATAATAATATCT+TGG + chr7_4:3543259-3543278 Msa1135800:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG - chr7_4:3543442-3543461 None:intergenic 15.0%
!!! TCCATAATTTTTTTTGTAAT+GGG - chr7_4:3544833-3544852 None:intergenic 15.0%
!!! ATCCATAATTTTTTTTGTAA+TGG - chr7_4:3544834-3544853 None:intergenic 15.0%
!! AAATGTAAAACATAAATAGA+CGG - chr7_4:3546021-3546040 None:intergenic 15.0%
!! AAATATAATTTATGAAATGG+GGG - chr7_4:3546191-3546210 None:intergenic 15.0%
!! GAAATATAATTTATGAAATG+GGG - chr7_4:3546192-3546211 None:intergenic 15.0%
!!! TGAAGTTTTAAATTTTGAAA+GGG + chr7_4:3546386-3546405 Msa1135800:intron 15.0%
!! AAAAAAATCACAACATAAAA+AGG - chr7_4:3547022-3547041 None:intergenic 15.0%
!!! ATATTGTTTTGTATTATAAG+AGG + chr7_4:3548446-3548465 Msa1135800:intron 15.0%
!! AAACATATATTTAACTAAAG+AGG + chr7_4:3548492-3548511 Msa1135800:intron 15.0%
!! AACTGGATTTAATATTTAAT+TGG + chr7_4:3549661-3549680 Msa1135800:intron 15.0%
!! TTAAAATAAATGTTGTACCT+AGG - chr7_4:3543107-3543126 None:intergenic 20.0%
!!! TGTTATTAATGTTATGGTTT+TGG + chr7_4:3543568-3543587 Msa1135800:intron 20.0%
!! TAAAGATAATTCAGAAGAAA+CGG + chr7_4:3543673-3543692 Msa1135800:five_prime_UTR 20.0%
!!! CTGATTTAATTTGTATTGTT+TGG + chr7_4:3543992-3544011 Msa1135800:intron 20.0%
!!! TTTTTTCAATTAAGACTACA+GGG + chr7_4:3544085-3544104 Msa1135800:intron 20.0%
!! AGCTAATAAAAATAAGCTAT+AGG + chr7_4:3544173-3544192 Msa1135800:intron 20.0%
!!! TGAACTTTAGAAAAAACAAT+TGG - chr7_4:3544626-3544645 None:intergenic 20.0%
!! ACCCATTACAAAAAAAATTA+TGG + chr7_4:3544829-3544848 Msa1135800:intron 20.0%
!! AAAAAATTATGGATTCTACT+TGG + chr7_4:3544840-3544859 Msa1135800:intron 20.0%
!! AAAAATTATGGATTCTACTT+GGG + chr7_4:3544841-3544860 Msa1135800:intron 20.0%
!! AAAAAGTCAAAATCAAAACT+AGG - chr7_4:3545138-3545157 None:intergenic 20.0%
!!! GTTCAATTTGAATGATTTTT+TGG + chr7_4:3545618-3545637 Msa1135800:CDS 20.0%
!!! TTTTTTGGAAAGTATAGATA+AGG + chr7_4:3545633-3545652 Msa1135800:CDS 20.0%
!!! TTTAACTTTTGAAATTTCAC+AGG + chr7_4:3545759-3545778 Msa1135800:intron 20.0%
!! TTGAATCACAAAATTTATAC+AGG + chr7_4:3546066-3546085 Msa1135800:intron 20.0%
!! TTGTTTGATAAAAAGTGAAA+AGG - chr7_4:3546232-3546251 None:intergenic 20.0%
!! ATGTGAAAACTTCTAATAAA+TGG - chr7_4:3546256-3546275 None:intergenic 20.0%
!!! AGTTTTTGGTTTAAAATTCT+TGG + chr7_4:3546328-3546347 Msa1135800:intron 20.0%
!!! CTGAAGTTTTAAATTTTGAA+AGG + chr7_4:3546385-3546404 Msa1135800:intron 20.0%
!!! GAAGTTTTAAATTTTGAAAG+GGG + chr7_4:3546387-3546406 Msa1135800:intron 20.0%
!!! AAGTTTTAAATTTTGAAAGG+GGG + chr7_4:3546388-3546407 Msa1135800:intron 20.0%
!!! TGTACAGTAAAATTCTTTTT+AGG + chr7_4:3546429-3546448 Msa1135800:intron 20.0%
!!! TGTACAGTAAAATTCTTTTT+AGG + chr7_4:3546429-3546448 Msa1135800:intron 20.0%
!!! GTATTTTCATGTTAAAAACA+TGG + chr7_4:3547045-3547064 Msa1135800:intron 20.0%
!! ATTAATTACACATGAATAGA+AGG + chr7_4:3548335-3548354 Msa1135800:intron 20.0%
!!! ATTTTGTCTTTAAAACATGT+TGG + chr7_4:3549153-3549172 Msa1135800:intron 20.0%
!! CAAAAAAAAAAAAGGGAAAA+TGG - chr7_4:3549333-3549352 None:intergenic 20.0%
!! AATTGTAATTAATCTGAACT+GGG - chr7_4:3550192-3550211 None:intergenic 20.0%
!! TAATTGTAATTAATCTGAAC+TGG - chr7_4:3550193-3550212 None:intergenic 20.0%
!! ATAGCGTGTTATTAATGTTA+TGG + chr7_4:3543562-3543581 Msa1135800:intron 25.0%
!! AGTTGTTCAATTGATTTAGA+TGG - chr7_4:3543737-3543756 None:intergenic 25.0%
!!! ATTTTTTACCAGAGTTTAAG+AGG - chr7_4:3543885-3543904 None:intergenic 25.0%
! TAAACTCTGGTAAAAAATAG+TGG + chr7_4:3543887-3543906 Msa1135800:intron 25.0%
!!! CTTTTTTCAATTAAGACTAC+AGG + chr7_4:3544084-3544103 Msa1135800:intron 25.0%
!!! TTTTTCAATTAAGACTACAG+GGG + chr7_4:3544086-3544105 Msa1135800:intron 25.0%
! TTTACTCCTCAATTATATGT+TGG + chr7_4:3544450-3544469 Msa1135800:intron 25.0%
!!! CTCTAAGTCATTTTCAAAAT+TGG + chr7_4:3544497-3544516 Msa1135800:intron 25.0%
!!! GACTATGTGTTTGTTTTTTA+CGG + chr7_4:3544551-3544570 Msa1135800:intron 25.0%
! ATGAGATACGAATATTATGA+TGG + chr7_4:3544745-3544764 Msa1135800:intron 25.0%
! GTTGAATGAATACACAAAAT+AGG + chr7_4:3544767-3544786 Msa1135800:intron 25.0%
! TTAGATCTACATTGTTTAGT+TGG - chr7_4:3544977-3544996 None:intergenic 25.0%
!!! TTCATTTTTGCTATCCATAA+TGG + chr7_4:3545169-3545188 Msa1135800:five_prime_UTR 25.0%
!!! TCATTTTTGCTATCCATAAT+GGG + chr7_4:3545170-3545189 Msa1135800:five_prime_UTR 25.0%
!!! TTTAACTTTTGAAATTCCAC+AGG + chr7_4:3545372-3545391 Msa1135800:intron 25.0%
! ATTCAAAGCTATTGGATAAA+TGG - chr7_4:3545477-3545496 None:intergenic 25.0%
!! ATTTTGTGATTCAAAGCTAT+TGG - chr7_4:3545485-3545504 None:intergenic 25.0%
!!! TTTTTTCCCTTGTTTCTTTT+AGG + chr7_4:3545594-3545613 Msa1135800:intron 25.0%
! GAAATTTCAAACTTCTCATT+TGG - chr7_4:3545874-3545893 None:intergenic 25.0%
! ATCACAAAATTTATACAGGT+AGG + chr7_4:3546070-3546089 Msa1135800:intron 25.0%
! ACCAAAAACTCTTACTAAAA+GGG - chr7_4:3546318-3546337 None:intergenic 25.0%
! AACCAAAAACTCTTACTAAA+AGG - chr7_4:3546319-3546338 None:intergenic 25.0%
!!! CTGTTTTAGATTTAGCTTAT+GGG + chr7_4:3546471-3546490 Msa1135800:intron 25.0%
! AATTGAAATTGCACAAGAAA+TGG + chr7_4:3546597-3546616 Msa1135800:CDS 25.0%
!!! AGGTTTGTTTTACTATACAA+AGG + chr7_4:3546638-3546657 Msa1135800:intron 25.0%
!!! CTGTTTTAGATTTAGCTTAT+GGG + chr7_4:3546471-3546490 Msa1135800:intron 25.0%
!! TGTGCATATTTATGTTTTAC+TGG + chr7_4:3546945-3546964 Msa1135800:intron 25.0%
! ATGCCAAAAAATAATAGTTC+TGG + chr7_4:3547314-3547333 Msa1135800:intron 25.0%
!!! TCTCCAGAACTATTATTTTT+TGG - chr7_4:3547320-3547339 None:intergenic 25.0%
!! ATATTTAATTGACTTTGGCA+TGG - chr7_4:3547605-3547624 None:intergenic 25.0%
! AAAGTCAACCAATTCAAAAT+TGG - chr7_4:3547692-3547711 None:intergenic 25.0%
! GATAAGTAATTCTTGTCATT+TGG + chr7_4:3548046-3548065 Msa1135800:intron 25.0%
! GTAAATCAACACAACATATT+TGG - chr7_4:3548128-3548147 None:intergenic 25.0%
! ATAAGCAAACATATTTGCAT+TGG - chr7_4:3548191-3548210 None:intergenic 25.0%
! AACAATAGTAATTTACCTAG+CGG - chr7_4:3548381-3548400 None:intergenic 25.0%
! TGTATTATAAGAGGAGAAAA+TGG + chr7_4:3548455-3548474 Msa1135800:intron 25.0%
! ACCTCAGCAAAAAAAAAAAA+GGG - chr7_4:3549340-3549359 None:intergenic 25.0%
!! TACTTCTTTTACCATTTTAC+TGG + chr7_4:3549547-3549566 Msa1135800:intron 25.0%
!!! TTTTACCATTTTACTGGTTT+TGG + chr7_4:3549553-3549572 Msa1135800:intron 25.0%
!!! ATATTTGGTATTGACTATCA+TGG + chr7_4:3549637-3549656 Msa1135800:intron 25.0%
!! TACCTGTTTTCATATTATTC+TGG + chr7_4:3549719-3549738 Msa1135800:intron 25.0%
! AACCAGAATAATATGAAAAC+AGG - chr7_4:3549724-3549743 None:intergenic 25.0%
! AGCATACAAAAGTAAGTAAT+AGG - chr7_4:3549759-3549778 None:intergenic 25.0%
! ATTGTAATTAATCTGAACTG+GGG - chr7_4:3550191-3550210 None:intergenic 25.0%
AACAACAACCAATTCTTCTT+CGG - chr7_4:3542983-3543002 None:intergenic 30.0%
TTCATTTGATTAAGCTCGTT+TGG + chr7_4:3543149-3543168 Msa1135800:intron 30.0%
TAATAACACGCTATGAAGTA+CGG - chr7_4:3543556-3543575 None:intergenic 30.0%
TAACAGACATGATGAAAAGA+AGG + chr7_4:3543601-3543620 Msa1135800:five_prime_UTR 30.0%
!! TGGTAAAAAATAGTGGATAC+TGG + chr7_4:3543894-3543913 Msa1135800:intron 30.0%
AACTTTAAGTCATCCACTAT+AGG - chr7_4:3543951-3543970 None:intergenic 30.0%
! GACTTAAAGTTAGCTTATAG+CGG + chr7_4:3543960-3543979 Msa1135800:intron 30.0%
!! AAGACACATTTTTGAGCTTA+TGG - chr7_4:3544272-3544291 None:intergenic 30.0%
GGATTCTTATTGTCAATCTT+GGG + chr7_4:3544342-3544361 Msa1135800:intron 30.0%
GATTCTTATTGTCAATCTTG+GGG + chr7_4:3544343-3544362 Msa1135800:intron 30.0%
ATTCTTATTGTCAATCTTGG+GGG + chr7_4:3544344-3544363 Msa1135800:intron 30.0%
AGACATCCAACATATAATTG+AGG - chr7_4:3544459-3544478 None:intergenic 30.0%
AACACATAGTCCAAAACAAT+TGG - chr7_4:3544542-3544561 None:intergenic 30.0%
TACACAAAATAGGATTATGC+TGG + chr7_4:3544777-3544796 Msa1135800:intron 30.0%
GATCTAGTGAATTCTTAATG+AGG - chr7_4:3544901-3544920 None:intergenic 30.0%
TAAGAATTCACTAGATCACA+TGG + chr7_4:3544904-3544923 Msa1135800:intron 30.0%
TGACCTTACTAAATGGAAAA+TGG + chr7_4:3545061-3545080 Msa1135800:intron 30.0%
!! AAGCCATTTTCCATTTAGTA+AGG - chr7_4:3545067-3545086 None:intergenic 30.0%
! CTAAATGGAAAATGGCTTTA+TGG + chr7_4:3545069-3545088 Msa1135800:intron 30.0%
AAAGAAACAAGGGAAAAAGA+AGG - chr7_4:3545206-3545225 None:intergenic 30.0%
!! CTTTTTCCCTTGTTTCTTTA+AGG + chr7_4:3545207-3545226 Msa1135800:five_prime_UTR 30.0%
TGAACTCCTTAAAGAAACAA+GGG - chr7_4:3545216-3545235 None:intergenic 30.0%
TTGAACTCCTTAAAGAAACA+AGG - chr7_4:3545217-3545236 None:intergenic 30.0%
! CTTTAAGGAGTTCAATTTGA+AGG + chr7_4:3545222-3545241 Msa1135800:five_prime_UTR 30.0%
! GTTCAATTTGAAGGATCTTT+TGG + chr7_4:3545231-3545250 Msa1135800:five_prime_UTR 30.0%
ATATGAGTTCGAAAACCTAA+TGG + chr7_4:3545261-3545280 Msa1135800:exon 30.0%
AAGTTTATCACCTTCTCATT+TGG - chr7_4:3545430-3545449 None:intergenic 30.0%
TTGAATCACAAAATTTGTGC+AGG + chr7_4:3545491-3545510 Msa1135800:intron 30.0%
!! TTCCTTTTTGTTATCGACAA+TGG + chr7_4:3545555-3545574 Msa1135800:intron 30.0%
!! TCCTTTTTGTTATCGACAAT+GGG + chr7_4:3545556-3545575 Msa1135800:intron 30.0%
AAGAAACAAGGGAAAAAAGA+AGG - chr7_4:3545592-3545611 None:intergenic 30.0%
TGAACTCCTAAAAGAAACAA+GGG - chr7_4:3545603-3545622 None:intergenic 30.0%
TTGAACTCCTAAAAGAAACA+AGG - chr7_4:3545604-3545623 None:intergenic 30.0%
AAGAAGGCTGATATAAAGAT+CGG - chr7_4:3545705-3545724 None:intergenic 30.0%
! TGAGAAGTTTGAAATTTCAC+AGG + chr7_4:3545876-3545895 Msa1135800:CDS 30.0%
CCAAAAACTCTTACTAAAAG+GGG - chr7_4:3546317-3546336 None:intergenic 30.0%
! TAAGCTAAATCTAAAACAGC+AGG - chr7_4:3546470-3546489 None:intergenic 30.0%
!! GCTGTTTTAGATTTAGCTTA+TGG + chr7_4:3546470-3546489 Msa1135800:intron 30.0%
!! TTCTTTAGAATCATAGGCTT+CGG - chr7_4:3546545-3546564 None:intergenic 30.0%
! AAGCCTATGATTCTAAAGAA+AGG + chr7_4:3546545-3546564 Msa1135800:CDS 30.0%
!! AGTCCTTTCTTTAGAATCAT+AGG - chr7_4:3546551-3546570 None:intergenic 30.0%
! TAAGCTAAATCTAAAACAGC+AGG - chr7_4:3546470-3546489 None:intergenic 30.0%
!! GCTGTTTTAGATTTAGCTTA+TGG + chr7_4:3546470-3546489 Msa1135800:intron 30.0%
!! AGTCCTTTCTTTAGAATCAT+CGG - chr7_4:3546551-3546570 None:intergenic 30.0%
AATTGCACAAGAAATGACAA+AGG + chr7_4:3546845-3546864 Msa1135800:CDS 30.0%
! TTTATATGTCATGCTGATTG+TGG + chr7_4:3547188-3547207 Msa1135800:intron 30.0%
GAGAATGATTGCTTGTAATA+GGG + chr7_4:3547336-3547355 Msa1135800:intron 30.0%
TAATAGGGATCCTGTAAAAT+AGG + chr7_4:3547351-3547370 Msa1135800:intron 30.0%
AATAGGGATCCTGTAAAATA+GGG + chr7_4:3547352-3547371 Msa1135800:intron 30.0%
AAACTCGTAAAAACTGTTTC+AGG - chr7_4:3547565-3547584 None:intergenic 30.0%
! TGAAACAGTTTTTACGAGTT+TGG + chr7_4:3547564-3547583 Msa1135800:intron 30.0%
AGGATGACTTATTTATCTTG+AGG + chr7_4:3547664-3547683 Msa1135800:intron 30.0%
TATTCACTTTCTATGAAGAG+AGG + chr7_4:3547782-3547801 Msa1135800:intron 30.0%
TATGACTCTTATCTTCCAAA+AGG - chr7_4:3548870-3548889 None:intergenic 30.0%
CTCAATAAAGAACTAGATAG+AGG - chr7_4:3548018-3548037 None:intergenic 30.0%
ACTAACACTCACTCATTTAT+TGG + chr7_4:3548545-3548564 Msa1135800:intron 30.0%
CTAACACTCACTCATTTATT+GGG + chr7_4:3548546-3548565 Msa1135800:intron 30.0%
!!! TTTTAGTTAAGAGGAGTGTT+AGG - chr7_4:3548643-3548662 None:intergenic 30.0%
GTAAATCAACGCAACATATT+TGG + chr7_4:3548687-3548706 Msa1135800:intron 30.0%
GCTAAGTAATTCTTGTCATT+TGG - chr7_4:3548769-3548788 None:intergenic 30.0%
CTGAATAAAGAACTAGATAG+AGG + chr7_4:3548797-3548816 Msa1135800:intron 30.0%
TATGACTCTTATCTTCCAAA+AGG + chr7_4:3548870-3548889 Msa1135800:intron 30.0%
!! ATGATTTGTATGAGACCTTT+TGG - chr7_4:3548888-3548907 None:intergenic 30.0%
TATAATACTACGTATCAACC+TGG + chr7_4:3549115-3549134 Msa1135800:intron 30.0%
!!! TCCCTTTTTTTTTTTTGCTG+AGG + chr7_4:3549336-3549355 Msa1135800:intron 30.0%
CACCTCAGCAAAAAAAAAAA+AGG - chr7_4:3549341-3549360 None:intergenic 30.0%
!! TTGTTTTGTCACTTGACATT+TGG + chr7_4:3549485-3549504 Msa1135800:intron 30.0%
TGTTATTCAAATCCGATTGA+AGG - chr7_4:3549589-3549608 None:intergenic 30.0%
GCATATGATTGATTATGAGA+GGG - chr7_4:3549935-3549954 None:intergenic 30.0%
TGCATATGATTGATTATGAG+AGG - chr7_4:3549936-3549955 None:intergenic 30.0%
TGTTGAGGATAATTTCCATA+AGG - chr7_4:3549965-3549984 None:intergenic 30.0%
TGGAAATTATCCTCAACATA+TGG + chr7_4:3549967-3549986 Msa1135800:CDS 30.0%
TTGAATTTCACCCCTACTTA+TGG + chr7_4:3542957-3542976 Msa1135800:five_prime_UTR 35.0%
GATGATAACCAGAATTACCT+AGG + chr7_4:3543087-3543106 Msa1135800:five_prime_UTR 35.0%
ATGTTGTACCTAGGTAATTC+TGG - chr7_4:3543098-3543117 None:intergenic 35.0%
TTATCTATGAACCAGAGTCA+TGG + chr7_4:3543375-3543394 Msa1135800:intron 35.0%
GTAATCATATGTGTCAGTGT+CGG + chr7_4:3543473-3543492 Msa1135800:intron 35.0%
TAATCATATGTGTCAGTGTC+GGG + chr7_4:3543474-3543493 Msa1135800:intron 35.0%
!! AGAATCTCTTTGGTATTGGT+AGG - chr7_4:3543704-3543723 None:intergenic 35.0%
AACGAGAATCTCTTTGGTAT+TGG - chr7_4:3543708-3543727 None:intergenic 35.0%
!! AGAAGAAGTATCATGCTGAA+AGG - chr7_4:3543783-3543802 None:intergenic 35.0%
TTTCAGCATGATACTTCTTC+TGG + chr7_4:3543782-3543801 Msa1135800:five_prime_UTR 35.0%
AACAACCACACAAGAAATTG+AGG + chr7_4:3543835-3543854 Msa1135800:five_prime_UTR 35.0%
AATTGAGGTTCCTAGCAATA+AGG + chr7_4:3543850-3543869 Msa1135800:five_prime_UTR 35.0%
GATGTACATACCTTATTGCT+AGG - chr7_4:3543863-3543882 None:intergenic 35.0%
ATGTACATCCTCTTAAACTC+TGG + chr7_4:3543874-3543893 Msa1135800:intron 35.0%
ATGACTAAAATAGACCCGTT+TGG - chr7_4:3544221-3544240 None:intergenic 35.0%
CGGATTCTTATTGTCAATCT+TGG + chr7_4:3544341-3544360 Msa1135800:intron 35.0%
CAATTGGTATGATGCAGTTT+AGG - chr7_4:3544526-3544545 None:intergenic 35.0%
! CTGCATCATACCAATTGTTT+TGG + chr7_4:3544529-3544548 Msa1135800:intron 35.0%
! CTATAACACGTGCATTTTTG+TGG - chr7_4:3544597-3544616 None:intergenic 35.0%
!! ACTTGTTTTCTCCTGCTTAA+TGG + chr7_4:3544661-3544680 Msa1135800:intron 35.0%
GATGATAGACTCAATTGACA+GGG + chr7_4:3544722-3544741 Msa1135800:intron 35.0%
ATTACACTAGAGAGGAAGTT+GGG + chr7_4:3544800-3544819 Msa1135800:intron 35.0%
CATGGATGATAGTCTAATAG+AGG + chr7_4:3544922-3544941 Msa1135800:intron 35.0%
GATGATAGTCTAATAGAGGT+AGG + chr7_4:3544926-3544945 Msa1135800:intron 35.0%
!! ACGTTGATGACCTTACTAAA+TGG + chr7_4:3545054-3545073 Msa1135800:intron 35.0%
AGGAAAATGATCACCCATTA+TGG - chr7_4:3545186-3545205 None:intergenic 35.0%
AAGAAGGCTGAGATAAAGAT+CGG - chr7_4:3545318-3545337 None:intergenic 35.0%
ATAGCAAGAGAAGAACAAGA+AGG - chr7_4:3545334-3545353 None:intergenic 35.0%
ACCCATTGTCGATAACAAAA+AGG - chr7_4:3545560-3545579 None:intergenic 35.0%
AGATAAGGCAGAAAAGCTAT+TGG + chr7_4:3545648-3545667 Msa1135800:CDS 35.0%
GCTGATATAAAGATCGGATA+TGG - chr7_4:3545699-3545718 None:intergenic 35.0%
ATAGCAAGAGAAGAACAAGA+AGG - chr7_4:3545334-3545353 None:intergenic 35.0%
CAGTTTCTCACTTTCTCATT+TGG - chr7_4:3545991-3546010 None:intergenic 35.0%
GATTAATCATTGCGAAGAGT+GGG + chr7_4:3546092-3546111 Msa1135800:intron 35.0%
AAGGGGATAATGATCAACAA+AGG - chr7_4:3546300-3546319 None:intergenic 35.0%
! CCCCTTTTAGTAAGAGTTTT+TGG + chr7_4:3546314-3546333 Msa1135800:intron 35.0%
!! TCTTTAGAATCATAGGCTTC+GGG - chr7_4:3546544-3546563 None:intergenic 35.0%
TTCAATTTGCCTCTTATCAC+CGG - chr7_4:3546584-3546603 None:intergenic 35.0%
AATTGCACAAGAAATGGCAA+AGG + chr7_4:3546603-3546622 Msa1135800:CDS 35.0%
AGTAAAACAAACCTGACTCA+AGG - chr7_4:3546632-3546651 None:intergenic 35.0%
!! TTCTTTAGAATCATCGGCTT+CGG - chr7_4:3546787-3546806 None:intergenic 35.0%
! AAGCCGATGATTCTAAAGAA+AGG + chr7_4:3546787-3546806 Msa1135800:CDS 35.0%
! GTGCTGATAAAGTTTGCAAT+TGG + chr7_4:3546905-3546924 Msa1135800:intron 35.0%
CATAGAAAAGAAGCTGAAGT+TGG - chr7_4:3547157-3547176 None:intergenic 35.0%
! CAACTTCAGCTTCTTTTCTA+TGG + chr7_4:3547155-3547174 Msa1135800:intron 35.0%
! TTCTTTTCTATGGTAGACTG+AGG + chr7_4:3547165-3547184 Msa1135800:intron 35.0%
GGAGAATGATTGCTTGTAAT+AGG + chr7_4:3547335-3547354 Msa1135800:intron 35.0%
ATCCTGTAAAATAGGGATCT+AGG + chr7_4:3547359-3547378 Msa1135800:intron 35.0%
GCATGCATAAAATAGAGATC+TGG + chr7_4:3547399-3547418 Msa1135800:intron 35.0%
! TTCATATGCCTGCTCTAAAT+TGG + chr7_4:3547430-3547449 Msa1135800:intron 35.0%
ACAAATCGTGATTGTGTGTA+TGG + chr7_4:3547490-3547509 Msa1135800:intron 35.0%
GTAAAACCAAGATGAGAGTT+AGG + chr7_4:3547644-3547663 Msa1135800:intron 35.0%
!! TTGAGGTGCCAATTTTGAAT+TGG + chr7_4:3547681-3547700 Msa1135800:intron 35.0%
TCAGTAAGACTATATTGTGC+CGG + chr7_4:3547878-3547897 Msa1135800:intron 35.0%
TCAACACAACATATTTGGAC+TGG - chr7_4:3548123-3548142 None:intergenic 35.0%
TCAAAGATAAGTCAGAAAGC+AGG - chr7_4:3548150-3548169 None:intergenic 35.0%
CTTTGACCTGATGTCAATAA+AGG + chr7_4:3548164-3548183 Msa1135800:intron 35.0%
ATTGGTCCTTTATTGACATC+AGG - chr7_4:3548173-3548192 None:intergenic 35.0%
TTTGACCTGATGATACACTT+GGG + chr7_4:3548232-3548251 Msa1135800:intron 35.0%
AAAAACCCAAGTGTATCATC+AGG - chr7_4:3548240-3548259 None:intergenic 35.0%
! CCAACACTCACTCTTTTATT+GGG - chr7_4:3548596-3548615 None:intergenic 35.0%
! TCCAACACTCACTCTTTTAT+TGG - chr7_4:3548597-3548616 None:intergenic 35.0%
TTTACCTGCTTTCCAACATA+GGG - chr7_4:3548672-3548691 None:intergenic 35.0%
ATTTACCTGCTTTCCAACAT+AGG - chr7_4:3548673-3548692 None:intergenic 35.0%
TCAGTAAGATTGTATTGTGC+TGG - chr7_4:3548937-3548956 None:intergenic 35.0%
ATTGTAGGATGCTTAATGGT+TGG - chr7_4:3548990-3549009 None:intergenic 35.0%
ACCATTAAGCATCCTACAAT+TGG + chr7_4:3548990-3549009 Msa1135800:intron 35.0%
TCCAATTGTAGGATGCTTAA+TGG - chr7_4:3548994-3549013 None:intergenic 35.0%
ATTAAGCATCCTACAATTGG+AGG + chr7_4:3548993-3549012 Msa1135800:intron 35.0%
GCATTAAAACCTCCAATTGT+AGG - chr7_4:3549005-3549024 None:intergenic 35.0%
TGCTATATCAAGAAAGCGAA+TGG + chr7_4:3549067-3549086 Msa1135800:intron 35.0%
AATAAAGTGAAAGCTGAACC+AGG - chr7_4:3549136-3549155 None:intergenic 35.0%
CAACGATAACTAGACAAAGA+TGG - chr7_4:3549233-3549252 None:intergenic 35.0%
!!! AATTTTGCTGTTGCATTGTC+AGG + chr7_4:3549301-3549320 Msa1135800:intron 35.0%
!!! TACCATTTTACTGGTTTTGG+AGG + chr7_4:3549556-3549575 Msa1135800:intron 35.0%
TCACAATTAAATGAGTGCTC+AGG + chr7_4:3549609-3549628 Msa1135800:intron 35.0%
CACAATTAAATGAGTGCTCA+GGG + chr7_4:3549610-3549629 Msa1135800:intron 35.0%
AGTGCTCAGGGTTTAATATT+TGG + chr7_4:3549622-3549641 Msa1135800:intron 35.0%
GCTGATAGTAATATGATGGT+GGG - chr7_4:3549898-3549917 None:intergenic 35.0%
TGCTGATAGTAATATGATGG+TGG - chr7_4:3549899-3549918 None:intergenic 35.0%
CGATGCTGATAGTAATATGA+TGG - chr7_4:3549902-3549921 None:intergenic 35.0%
GATTGATTATGAGAGGGATA+TGG - chr7_4:3549929-3549948 None:intergenic 35.0%
GGATAATTTCCATAAGGAGT+AGG - chr7_4:3549959-3549978 None:intergenic 35.0%
AACAGGGGTTATGATCATTA+TGG + chr7_4:3550061-3550080 Msa1135800:CDS 35.0%
!! ATGATCATTATGGTGGACAA+AGG + chr7_4:3550071-3550090 Msa1135800:CDS 35.0%
!! TGATCATTATGGTGGACAAA+GGG + chr7_4:3550072-3550091 Msa1135800:CDS 35.0%
TAATTAATCTGAACTGGGGA+TGG - chr7_4:3550187-3550206 None:intergenic 35.0%
TTCTTCTTCGGCCATAAGTA+GGG - chr7_4:3542971-3542990 None:intergenic 40.0%
ATTCTTCTTCGGCCATAAGT+AGG - chr7_4:3542972-3542991 None:intergenic 40.0%
ACTTATGGCCGAAGAAGAAT+TGG + chr7_4:3542972-3542991 Msa1135800:five_prime_UTR 40.0%
AACTTGCGCTTACAATCAGA+GGG - chr7_4:3543018-3543037 None:intergenic 40.0%
GAAGATCAACACTCTGATGA+CGG + chr7_4:3543039-3543058 Msa1135800:five_prime_UTR 40.0%
TGGTTATCATCGTCAAGACA+AGG - chr7_4:3543078-3543097 None:intergenic 40.0%
ACACGATAAGTAACCGACAT+CGG + chr7_4:3543507-3543526 Msa1135800:intron 40.0%
TACCAAAGAGATTCTCGTTG+AGG + chr7_4:3543709-3543728 Msa1135800:five_prime_UTR 40.0%
! GAAGTATCATGCTGAAAGGT+GGG - chr7_4:3543779-3543798 None:intergenic 40.0%
!! AGAAGTATCATGCTGAAAGG+TGG - chr7_4:3543780-3543799 None:intergenic 40.0%
GGACAAAAGCAACCTATATC+CGG + chr7_4:3543803-3543822 Msa1135800:five_prime_UTR 40.0%
GACAAAAGCAACCTATATCC+GGG + chr7_4:3543804-3543823 Msa1135800:five_prime_UTR 40.0%
AGGAACCTCAATTTCTTGTG+TGG - chr7_4:3543843-3543862 None:intergenic 40.0%
GTAAATGACCTGTTGCCAAA+CGG + chr7_4:3544203-3544222 Msa1135800:intron 40.0%
TAAATGACCTGTTGCCAAAC+GGG + chr7_4:3544204-3544223 Msa1135800:intron 40.0%
TAACACGTATCCAAGCCTAA+GGG - chr7_4:3544305-3544324 None:intergenic 40.0%
ATAACACGTATCCAAGCCTA+AGG - chr7_4:3544306-3544325 None:intergenic 40.0%
TAGGCTTGGATACGTGTTAT+TGG + chr7_4:3544306-3544325 Msa1135800:intron 40.0%
! AGGCTTGGATACGTGTTATT+GGG + chr7_4:3544307-3544326 Msa1135800:intron 40.0%
GTTATTGGGCTCAATCATGT+CGG + chr7_4:3544321-3544340 Msa1135800:intron 40.0%
CACATATTTCCTCTCTGCAA+TGG + chr7_4:3544419-3544438 Msa1135800:intron 40.0%
TGTCTGCTCATATGTTGTGA+CGG + chr7_4:3544474-3544493 Msa1135800:intron 40.0%
AGTAGCTGTTACCATTAAGC+AGG - chr7_4:3544675-3544694 None:intergenic 40.0%
ACCACATGAGTAAGCATGAT+AGG + chr7_4:3544700-3544719 Msa1135800:intron 40.0%
TCCTATCATGCTTACTCATG+TGG - chr7_4:3544704-3544723 None:intergenic 40.0%
GGATGATAGACTCAATTGAC+AGG + chr7_4:3544721-3544740 Msa1135800:intron 40.0%
TATGCTGGATTACACTAGAG+AGG + chr7_4:3544792-3544811 Msa1135800:intron 40.0%
GATTACACTAGAGAGGAAGT+TGG + chr7_4:3544799-3544818 Msa1135800:intron 40.0%
TTACACTAGAGAGGAAGTTG+GGG + chr7_4:3544801-3544820 Msa1135800:intron 40.0%
TGGATTCTACTTGGGTGATT+TGG + chr7_4:3544849-3544868 Msa1135800:intron 40.0%
TAGGTTGTAGACCTGCAAAA+GGG - chr7_4:3545119-3545138 None:intergenic 40.0%
GTATCTAACCTCTGTGAACA+TGG - chr7_4:3545290-3545309 None:intergenic 40.0%
GCTGAGATAAAGATCGGATA+TGG - chr7_4:3545312-3545331 None:intergenic 40.0%
ACGTGAAGTTCCAAATGAGA+AGG + chr7_4:3545417-3545436 Msa1135800:CDS 40.0%
GAAATTTCACAGGACGATGA+TGG + chr7_4:3545769-3545788 Msa1135800:intron 40.0%
GGATTAATCATTGCGAAGAG+TGG + chr7_4:3546091-3546110 Msa1135800:intron 40.0%
GGGGAGAAGTTATTTGAGAA+TGG - chr7_4:3546172-3546191 None:intergenic 40.0%
CTCATGTGATTGAGGAGATT+AGG - chr7_4:3546356-3546375 None:intergenic 40.0%
TACAGCAACTCATGTGATTG+AGG - chr7_4:3546364-3546383 None:intergenic 40.0%
!! TCTTTAGAATCATCGGCTTC+GGG - chr7_4:3546786-3546805 None:intergenic 40.0%
TCCAAGTTACTGGTGATAAG+AGG + chr7_4:3546814-3546833 Msa1135800:CDS 40.0%
AGTCAAACAAACCTGACTCA+AGG - chr7_4:3546874-3546893 None:intergenic 40.0%
AGCTGAAGTTGGCACATATA+TGG - chr7_4:3547146-3547165 None:intergenic 40.0%
! ATATGTCATGCTGATTGTGG+AGG + chr7_4:3547191-3547210 Msa1135800:intron 40.0%
! TGCCTAGATCCCTATTTTAC+AGG - chr7_4:3547364-3547383 None:intergenic 40.0%
! ACACTGAACCAATTTAGAGC+AGG - chr7_4:3547441-3547460 None:intergenic 40.0%
AGTCATCCTAACTCTCATCT+TGG - chr7_4:3547653-3547672 None:intergenic 40.0%
!!! TTTGACCGTTGACTTTTCCA+TGG + chr7_4:3547723-3547742 Msa1135800:intron 40.0%
!!! TTGACCGTTGACTTTTCCAT+GGG + chr7_4:3547724-3547743 Msa1135800:intron 40.0%
!! TGCAATTGGGGTTTTAATGC+CGG - chr7_4:3547810-3547829 None:intergenic 40.0%
CATTAAGCATCCTGCAATTG+GGG - chr7_4:3547822-3547841 None:intergenic 40.0%
CCATTAAGCATCCTGCAATT+GGG - chr7_4:3547823-3547842 None:intergenic 40.0%
ACCATTAAGCATCCTGCAAT+TGG - chr7_4:3547824-3547843 None:intergenic 40.0%
ATTGCAGGATGCTTAATGGT+TGG + chr7_4:3547824-3547843 Msa1135800:intron 40.0%
TGGAAGATAAGAGTCATACC+TGG + chr7_4:3547947-3547966 Msa1135800:intron 40.0%
!! AACATATTTGGACTGGTTCC+GGG - chr7_4:3548699-3548718 None:intergenic 40.0%
!! CAACATATTTGGACTGGTTC+CGG - chr7_4:3548698-3548717 None:intergenic 40.0%
CTTTGACCTGATGATACACT+TGG + chr7_4:3548231-3548250 Msa1135800:intron 40.0%
ACACATGAATAGAAGGCAAG+AGG + chr7_4:3548342-3548361 Msa1135800:intron 40.0%
CACATGAATAGAAGGCAAGA+GGG + chr7_4:3548343-3548362 Msa1135800:intron 40.0%
ACACTCACTCATTTATTGGG+TGG + chr7_4:3548549-3548568 Msa1135800:intron 40.0%
CCCAATAAAAGAGTGAGTGT+TGG + chr7_4:3548593-3548612 Msa1135800:intron 40.0%
TTACCTGCTTTCCAACATAG+GGG - chr7_4:3548671-3548690 None:intergenic 40.0%
TCAACGCAACATATTTGGAC+TGG + chr7_4:3548692-3548711 Msa1135800:intron 40.0%
!! CAACATATTTGGACTGGTTC+CGG + chr7_4:3548698-3548717 Msa1135800:intron 40.0%
ATTAAGGTAGCCATGAGATC+CGG - chr7_4:3548720-3548739 None:intergenic 40.0%
! AGATTGTATTGTGCTGGCAT+TGG - chr7_4:3548931-3548950 None:intergenic 40.0%
ACTTAGAAGAGGTGACAGAT+TGG - chr7_4:3549206-3549225 None:intergenic 40.0%
AAGATGGCGAAACTTAGAAG+AGG - chr7_4:3549217-3549236 None:intergenic 40.0%
!! GTTGAGCTCTGAGATGATAA+TGG + chr7_4:3549421-3549440 Msa1135800:intron 40.0%
CTCCTCCAAAACCAGTAAAA+TGG - chr7_4:3549561-3549580 None:intergenic 40.0%
!! GTATTGACTATCATGGCAAC+TGG + chr7_4:3549644-3549663 Msa1135800:intron 40.0%
!! CTTACTTTTGTATGCTGTGC+TGG + chr7_4:3549763-3549782 Msa1135800:intron 40.0%
!! GATAGTAATATGATGGTGGG+TGG - chr7_4:3549895-3549914 None:intergenic 40.0%
CATATTACTATCAGCATCGC+TGG + chr7_4:3549903-3549922 Msa1135800:CDS 40.0%
TCATATGCACCTACTCCTTA+TGG + chr7_4:3549947-3549966 Msa1135800:CDS 40.0%
AGGGGTTATGATCATTATGG+TGG + chr7_4:3550064-3550083 Msa1135800:CDS 40.0%
!! GATCATTATGGTGGACAAAG+GGG + chr7_4:3550073-3550092 Msa1135800:CDS 40.0%
TCCATATGGATATTGTGCAG+GGG - chr7_4:3550227-3550246 None:intergenic 40.0%
CTCCATATGGATATTGTGCA+GGG - chr7_4:3550228-3550247 None:intergenic 40.0%
TATGGAAAGCCACCATTGTA+TGG + chr7_4:3550304-3550323 Msa1135800:CDS 40.0%
TCTACTCCAGCACAATCATA+TGG + chr7_4:3550409-3550428 Msa1135800:CDS 40.0%
TCTACTCCAGCACAATCATA+TGG + chr7_4:3550409-3550428 Msa1135800:CDS 40.0%
TCTACTCCAGCACAATCATA+TGG + chr7_4:3550409-3550428 Msa1135800:CDS 40.0%
AAGGACAACATCCAGTCTTA+TGG + chr7_4:3550833-3550852 Msa1135800:CDS 40.0%
TCTTCTTCGGCCATAAGTAG+GGG - chr7_4:3542970-3542989 None:intergenic 45.0%
GAACTTGCGCTTACAATCAG+AGG - chr7_4:3543019-3543038 None:intergenic 45.0%
CACGATAAGTAACCGACATC+GGG + chr7_4:3543508-3543527 Msa1135800:intron 45.0%
GCCAGAGGAAAATGCTCATT+CGG + chr7_4:3543631-3543650 Msa1135800:five_prime_UTR 45.0%
! TCCGAATGAGCATTTTCCTC+TGG - chr7_4:3543635-3543654 None:intergenic 45.0%
AGAGGAAAATGCTCATTCGG+AGG + chr7_4:3543634-3543653 Msa1135800:five_prime_UTR 45.0%
CTCCTCAACGAGAATCTCTT+TGG - chr7_4:3543714-3543733 None:intergenic 45.0%
!! TAGCTGCTAGGCTAGTCTAT+AGG + chr7_4:3543918-3543937 Msa1135800:intron 45.0%
!! AGCTGCTAGGCTAGTCTATA+GGG + chr7_4:3543919-3543938 Msa1135800:intron 45.0%
TATAGGGGATGGACCTATAG+TGG + chr7_4:3543935-3543954 Msa1135800:intron 45.0%
AAATAGACCCGTTTGGCAAC+AGG - chr7_4:3544214-3544233 None:intergenic 45.0%
ACAAGCAAACCATTGCAGAG+AGG - chr7_4:3544431-3544450 None:intergenic 45.0%
!! TTGGGTGATTTGGTCATGTG+CGG + chr7_4:3544859-3544878 Msa1135800:intron 45.0%
! AGCTTAAAACCCCCTTTTGC+AGG + chr7_4:3545105-3545124 Msa1135800:intron 45.0%
AGGTTGTAGACCTGCAAAAG+GGG - chr7_4:3545118-3545137 None:intergenic 45.0%
CTAGGTTGTAGACCTGCAAA+AGG - chr7_4:3545120-3545139 None:intergenic 45.0%
CTGTGAACATGGCATCCATT+AGG - chr7_4:3545279-3545298 None:intergenic 45.0%
AATGGATGCCATGTTCACAG+AGG + chr7_4:3545279-3545298 Msa1135800:exon 45.0%
! TCATTTGGAACTTCACGTGC+AGG - chr7_4:3545415-3545434 None:intergenic 45.0%
GTATCTAACCTCTGCACTCA+TGG - chr7_4:3545677-3545696 None:intergenic 45.0%
! ATTTCACAGGACGATGATGG+AGG + chr7_4:3545772-3545791 Msa1135800:intron 45.0%
AGGTCTTGAGCTACAAATGC+AGG - chr7_4:3545802-3545821 None:intergenic 45.0%
GAAATTTCACAGGCTGATGC+TGG + chr7_4:3545886-3545905 Msa1135800:CDS 45.0%
GAAAGGACTGTCCAAGTTAC+CGG + chr7_4:3546562-3546581 Msa1135800:CDS 45.0%
TCCAAGTTACCGGTGATAAG+AGG + chr7_4:3546572-3546591 Msa1135800:CDS 45.0%
GAAAGGACTGTCCAAGTTAC+TGG + chr7_4:3546562-3546581 Msa1135800:CDS 45.0%
GCCTCTTATCACCAGTAACT+TGG - chr7_4:3546818-3546837 None:intergenic 45.0%
! ATGCTGATTGTGGAGGTGAT+CGG + chr7_4:3547198-3547217 Msa1135800:intron 45.0%
GGTGATCTATCTCACTTGCA+TGG - chr7_4:3547544-3547563 None:intergenic 45.0%
!!! TGACCGTTGACTTTTCCATG+GGG + chr7_4:3547725-3547744 Msa1135800:intron 45.0%
TGACCCCATGGAAAAGTCAA+CGG - chr7_4:3547731-3547750 None:intergenic 45.0%
CTTTCTATGAAGAGAGGTCC+CGG + chr7_4:3547788-3547807 Msa1135800:intron 45.0%
!! GCAATTGGGGTTTTAATGCC+GGG - chr7_4:3547809-3547828 None:intergenic 45.0%
GGCATTAAAACCCCAATTGC+AGG + chr7_4:3547809-3547828 Msa1135800:intron 45.0%
CCCAATTGCAGGATGCTTAA+TGG + chr7_4:3547820-3547839 Msa1135800:intron 45.0%
! AGACTATATTGTGCCGGCAT+TGG + chr7_4:3547884-3547903 Msa1135800:intron 45.0%
TCAGAAGACACGACTTAACC+AGG - chr7_4:3547968-3547987 None:intergenic 45.0%
ATTAAGGTAGCCATGAGACC+CGG + chr7_4:3548095-3548114 Msa1135800:intron 45.0%
!!! GGGGAGGGATTTTAGTTAAG+AGG - chr7_4:3548652-3548671 None:intergenic 45.0%
CTAAAATCCCTCCCCTATGT+TGG + chr7_4:3548657-3548676 Msa1135800:intron 45.0%
TCAGAAGACACGACTTCACT+AGG + chr7_4:3548847-3548866 Msa1135800:intron 45.0%
!! AGCTCTGAGATGATAATGGC+AGG + chr7_4:3549425-3549444 Msa1135800:intron 45.0%
TAGCCTGTCAAGTCATCATC+AGG + chr7_4:3549788-3549807 Msa1135800:intron 45.0%
GGTCAGCAAGGTTCACATTA+TGG + chr7_4:3549869-3549888 Msa1135800:CDS 45.0%
ATCCTCAACATATGGCTCCA+AGG + chr7_4:3549975-3549994 Msa1135800:CDS 45.0%
TCATAACCCCTGTTGTGTGA+GGG - chr7_4:3550055-3550074 None:intergenic 45.0%
ATCATAACCCCTGTTGTGTG+AGG - chr7_4:3550056-3550075 None:intergenic 45.0%
ATAAGGACCGGTACAGTGTT+GGG - chr7_4:3550146-3550165 None:intergenic 45.0%
CCTATGGAGGGTAAAGGATA+AGG - chr7_4:3550163-3550182 None:intergenic 45.0%
CCTTATCCTTTACCCTCCAT+AGG + chr7_4:3550160-3550179 Msa1135800:CDS 45.0%
CCATATGGATATTGTGCAGG+GGG - chr7_4:3550226-3550245 None:intergenic 45.0%
CCTCCATATGGATATTGTGC+AGG - chr7_4:3550229-3550248 None:intergenic 45.0%
CCTGCACAATATCCATATGG+AGG + chr7_4:3550226-3550245 Msa1135800:CDS 45.0%
! TAGGTTGGATGTCCTCCATA+TGG - chr7_4:3550241-3550260 None:intergenic 45.0%
TCTGGATGTTGTCCTTGTGA+AGG - chr7_4:3550460-3550479 None:intergenic 45.0%
GGACAACATCCAGAGTCTTA+TGG + chr7_4:3550466-3550485 Msa1135800:CDS 45.0%
GCTGGAGTAGAACCATGATA+CGG - chr7_4:3550523-3550542 None:intergenic 45.0%
TCTGGATGTTGTCCTTGTGA+AGG - chr7_4:3550460-3550479 None:intergenic 45.0%
GGACAACATCCAGAGTCTTA+TGG + chr7_4:3550466-3550485 Msa1135800:CDS 45.0%
GCTGGAGTAGAACCATGATA+CGG - chr7_4:3550523-3550542 None:intergenic 45.0%
TCTGGATGTTGTCCTTGTGA+AGG - chr7_4:3550460-3550479 None:intergenic 45.0%
GGACAACATCCAGAGTCTTA+TGG + chr7_4:3550466-3550485 Msa1135800:CDS 45.0%
TCTACTCCAGCACAATCACA+TGG + chr7_4:3550778-3550797 Msa1135800:CDS 45.0%
ACTGGATGTTGTCCTTGTGA+AGG - chr7_4:3550829-3550848 None:intergenic 45.0%
! GACAACATCCAGTCTTATGG+CGG + chr7_4:3550836-3550855 Msa1135800:CDS 45.0%
TGAACCAGAGTCATGGACAC+CGG + chr7_4:3543382-3543401 Msa1135800:intron 50.0%
GTTTGTGTCCGTGTCATGTC+CGG - chr7_4:3543404-3543423 None:intergenic 50.0%
! CATATGTGTCAGTGTCGGGT+CGG + chr7_4:3543478-3543497 Msa1135800:intron 50.0%
GATCAAGCATGTCCCGATGT+CGG - chr7_4:3543523-3543542 None:intergenic 50.0%
ATCGGGACATGCTTGATCTG+AGG + chr7_4:3543525-3543544 Msa1135800:intron 50.0%
AAAGAAGGTTGCTGAGCCAG+AGG + chr7_4:3543616-3543635 Msa1135800:five_prime_UTR 50.0%
AAAGGTGGGATCATTCGAGC+TGG - chr7_4:3543765-3543784 None:intergenic 50.0%
GTTGTGTCAGACCCGGATAT+AGG - chr7_4:3543818-3543837 None:intergenic 50.0%
TGTGGTTGTTGTGTCAGACC+CGG - chr7_4:3543825-3543844 None:intergenic 50.0%
GTGGATACTGGATAGCTGCT+AGG + chr7_4:3543906-3543925 Msa1135800:intron 50.0%
!! GCTGCTAGGCTAGTCTATAG+GGG + chr7_4:3543920-3543939 Msa1135800:intron 50.0%
!! CTAGGCTAGTCTATAGGGGA+TGG + chr7_4:3543924-3543943 Msa1135800:intron 50.0%
GTCTTGCCAAACACACCCTT+AGG + chr7_4:3544287-3544306 Msa1135800:intron 50.0%
! TCCAAGCCTAAGGGTGTGTT+TGG - chr7_4:3544296-3544315 None:intergenic 50.0%
GGTTGTAGACCTGCAAAAGG+GGG - chr7_4:3545117-3545136 None:intergenic 50.0%
GAAATTCCACAGGCTGATGC+TGG + chr7_4:3545382-3545401 Msa1135800:intron 50.0%
ATTGGATGCCATGAGTGCAG+AGG + chr7_4:3545666-3545685 Msa1135800:CDS 50.0%
ATTTCACAGGCTGATGCTGG+AGG + chr7_4:3545889-3545908 Msa1135800:CDS 50.0%
ATCCCACAATAGCCTGAGCA+GGG - chr7_4:3545945-3545964 None:intergenic 50.0%
TAGGCTTCGGGAAGATGTTG+AGG - chr7_4:3546532-3546551 None:intergenic 50.0%
GCCTCTTATCACCGGTAACT+TGG - chr7_4:3546576-3546595 None:intergenic 50.0%
GACAAAGGAAGCCTTGAGTC+AGG + chr7_4:3546860-3546879 Msa1135800:CDS 50.0%
! TGCTGATTGTGGAGGTGATC+GGG + chr7_4:3547199-3547218 Msa1135800:intron 50.0%
AGAAAGCAATGCTGACCCCA+TGG - chr7_4:3547743-3547762 None:intergenic 50.0%
! CTCATTTTGAGCGCCAATGC+CGG - chr7_4:3547900-3547919 None:intergenic 50.0%
CTGCTTTCCAACATAGGGGA+GGG - chr7_4:3548667-3548686 None:intergenic 50.0%
!! CACTTTCGTGCTCTGAAGAG+AGG - chr7_4:3549034-3549053 None:intergenic 50.0%
! GGAGGAGCATGTCCTTCAAT+CGG + chr7_4:3549574-3549593 Msa1135800:intron 50.0%
! CCACCTGATGATGACTTGAC+AGG - chr7_4:3549794-3549813 None:intergenic 50.0%
CCTGTCAAGTCATCATCAGG+TGG + chr7_4:3549791-3549810 Msa1135800:CDS 50.0%
ATCAGGTGGTTTCAGACAGC+AGG + chr7_4:3549805-3549824 Msa1135800:CDS 50.0%
ATCTGGTGGTCCACCACTAT+GGG + chr7_4:3549847-3549866 Msa1135800:CDS 50.0%
CTCCTTGGAGCCATATGTTG+AGG - chr7_4:3549980-3549999 None:intergenic 50.0%
ATGGCTCCAAGGAGCAGTTA+CGG + chr7_4:3549986-3550005 Msa1135800:CDS 50.0%
! GAGCAGTTACGGTTCTGGTT+GGG + chr7_4:3549997-3550016 Msa1135800:CDS 50.0%
! CAGTGTTGGGGGATAGAACT+GGG - chr7_4:3550133-3550152 None:intergenic 50.0%
! ACAGTGTTGGGGGATAGAAC+TGG - chr7_4:3550134-3550153 None:intergenic 50.0%
TCTATCCCCCAACACTGTAC+CGG + chr7_4:3550136-3550155 Msa1135800:CDS 50.0%
TAAGGACCGGTACAGTGTTG+GGG - chr7_4:3550145-3550164 None:intergenic 50.0%
GATAAGGACCGGTACAGTGT+TGG - chr7_4:3550147-3550166 None:intergenic 50.0%
GGAGGGTAAAGGATAAGGAC+CGG - chr7_4:3550158-3550177 None:intergenic 50.0%
GATGGACCTATGGAGGGTAA+AGG - chr7_4:3550169-3550188 None:intergenic 50.0%
ATGGATATTGTGCAGGGGGA+CGG - chr7_4:3550222-3550241 None:intergenic 50.0%
CCCCCTGCACAATATCCATA+TGG + chr7_4:3550223-3550242 Msa1135800:CDS 50.0%
!! TGCATGATTTGCTTGAGCCC+AGG - chr7_4:3550272-3550291 None:intergenic 50.0%
GCTGGAGTAGAACCCTGATA+CGG - chr7_4:3550400-3550419 None:intergenic 50.0%
CTCCAGCACAATCATATGGC+AGG + chr7_4:3550413-3550432 Msa1135800:CDS 50.0%
TATGGCAGGCCACCATTGTT+TGG + chr7_4:3550427-3550446 Msa1135800:CDS 50.0%
GAAGGTGGCATGCCAAACAA+TGG - chr7_4:3550442-3550461 None:intergenic 50.0%
TTTGGCATGCCACCTTCACA+AGG + chr7_4:3550445-3550464 Msa1135800:CDS 50.0%
GGATGTTGTCCTTGTGAAGG+TGG - chr7_4:3550457-3550476 None:intergenic 50.0%
CTCCAGCACAATCATATGGC+TGG + chr7_4:3550413-3550432 Msa1135800:CDS 50.0%
! TATGGCTGGCCACCATTGTT+TGG + chr7_4:3550550-3550569 Msa1135800:CDS 50.0%
GAAGGTGGCATGCCAAACAA+TGG - chr7_4:3550442-3550461 None:intergenic 50.0%
TTTGGCATGCCACCTTCACA+AGG + chr7_4:3550445-3550464 Msa1135800:CDS 50.0%
GGATGTTGTCCTTGTGAAGG+TGG - chr7_4:3550457-3550476 None:intergenic 50.0%
CTCCAGCACAATCATATGGC+AGG + chr7_4:3550413-3550432 Msa1135800:CDS 50.0%
TATGGCAGGCCACCATTGTT+TGG + chr7_4:3550427-3550446 Msa1135800:CDS 50.0%
GAAGGTGGCATGCCAAACAA+TGG - chr7_4:3550442-3550461 None:intergenic 50.0%
TTTGGCATGCCACCTTCACA+AGG + chr7_4:3550445-3550464 Msa1135800:CDS 50.0%
GGATGTTGTCCTTGTGAAGG+TGG - chr7_4:3550457-3550476 None:intergenic 50.0%
GCTGGAGTAGAACCCTGATA+CGG - chr7_4:3550400-3550419 None:intergenic 50.0%
GGATGTTGTCCTTGTGAAGG+TGG - chr7_4:3550457-3550476 None:intergenic 50.0%
ATGTCCGGTGTCCATGACTC+TGG - chr7_4:3543389-3543408 None:intergenic 55.0%
CATGGACACCGGACATGACA+CGG + chr7_4:3543393-3543412 Msa1135800:intron 55.0%
GCCAAACACACCCTTAGGCT+TGG + chr7_4:3544292-3544311 Msa1135800:intron 55.0%
GAATCTCCAGCATCAGCCTG+TGG - chr7_4:3545391-3545410 None:intergenic 55.0%
ATCCCATGATAGCCCGAGCA+GGG - chr7_4:3545828-3545847 None:intergenic 55.0%
TCTCCTGCACTTGTAGCTCG+AGG + chr7_4:3545913-3545932 Msa1135800:CDS 55.0%
TCCCCTGCTCAGGCTATTGT+GGG + chr7_4:3545940-3545959 Msa1135800:CDS 55.0%
TCCCACAATAGCCTGAGCAG+GGG - chr7_4:3545944-3545963 None:intergenic 55.0%
GATCCCACAATAGCCTGAGC+AGG - chr7_4:3545946-3545965 None:intergenic 55.0%
GGCAAAGGAAGCCTTGAGTC+AGG + chr7_4:3546618-3546637 Msa1135800:CDS 55.0%
TCGGCTTCGGGAAGATCTTG+AGG - chr7_4:3546774-3546793 None:intergenic 55.0%
CCTGCTTTCCAACATAGGGG+AGG - chr7_4:3548668-3548687 None:intergenic 55.0%
CCTCCCCTATGTTGGAAAGC+AGG + chr7_4:3548665-3548684 Msa1135800:intron 55.0%
!! TGGACTGGTTCCGGATCTCA+TGG + chr7_4:3548707-3548726 Msa1135800:intron 55.0%
!! GTGCTCTGAAGAGAGGTGTC+AGG - chr7_4:3549027-3549046 None:intergenic 55.0%
GATCTGGTGGTCCACCACTA+TGG + chr7_4:3549846-3549865 Msa1135800:CDS 55.0%
TCTGGTGGTCCACCACTATG+GGG + chr7_4:3549848-3549867 Msa1135800:CDS 55.0%
GAACCTTGCTGACCCCATAG+TGG - chr7_4:3549863-3549882 None:intergenic 55.0%
CCAGAACCGTAACTGCTCCT+TGG - chr7_4:3549995-3550014 None:intergenic 55.0%
CCAAGGAGCAGTTACGGTTC+TGG + chr7_4:3549992-3550011 Msa1135800:CDS 55.0%
! GGAGCAGTTACGGTTCTGGT+TGG + chr7_4:3549996-3550015 Msa1135800:CDS 55.0%
! ACGGTTCTGGTTGGGAGCAA+AGG + chr7_4:3550005-3550024 Msa1135800:CDS 55.0%
AAGGCCTCACCAGAGTTTGC+AGG + chr7_4:3550024-3550043 Msa1135800:CDS 55.0%
AGGCCTCACCAGAGTTTGCA+GGG + chr7_4:3550025-3550044 Msa1135800:CDS 55.0%
TAACCCCTGTTGTGTGAGGG+CGG - chr7_4:3550052-3550071 None:intergenic 55.0%
TGGGGGATAGAACTGGGATG+CGG - chr7_4:3550127-3550146 None:intergenic 55.0%
! AAGGACCGGTACAGTGTTGG+GGG - chr7_4:3550144-3550163 None:intergenic 55.0%
ACTGGGGATGGACCTATGGA+GGG - chr7_4:3550175-3550194 None:intergenic 55.0%
AACTGGGGATGGACCTATGG+AGG - chr7_4:3550176-3550195 None:intergenic 55.0%
CTGAACTGGGGATGGACCTA+TGG - chr7_4:3550179-3550198 None:intergenic 55.0%
ATCCAACCTACCCTCAAGCC+TGG + chr7_4:3550251-3550270 Msa1135800:CDS 55.0%
TCCAACCTACCCTCAAGCCT+GGG + chr7_4:3550252-3550271 Msa1135800:CDS 55.0%
TTGCTTGAGCCCAGGCTTGA+GGG - chr7_4:3550264-3550283 None:intergenic 55.0%
TTTGCTTGAGCCCAGGCTTG+AGG - chr7_4:3550265-3550284 None:intergenic 55.0%
CATGCACCTCCACAGCAGTA+TGG + chr7_4:3550286-3550305 Msa1135800:CDS 55.0%
GGCTTTCCATACTGCTGTGG+AGG - chr7_4:3550295-3550314 None:intergenic 55.0%
GGTGGCTTTCCATACTGCTG+TGG - chr7_4:3550298-3550317 None:intergenic 55.0%
GAAGGTGGCACGCCATACAA+TGG - chr7_4:3550319-3550338 None:intergenic 55.0%
TATGGCGTGCCACCTTCACA+AGG + chr7_4:3550322-3550341 Msa1135800:CDS 55.0%
ATGGCGTGCCACCTTCACAA+GGG + chr7_4:3550323-3550342 Msa1135800:CDS 55.0%
TGTGGATGCTGCCCTTGTGA+AGG - chr7_4:3550337-3550356 None:intergenic 55.0%
TTCACAAGGGCAGCATCCAC+AGG + chr7_4:3550336-3550355 Msa1135800:CDS 55.0%
CTAGGGTGGACATAAGCCTG+TGG - chr7_4:3550355-3550374 None:intergenic 55.0%
ACCAGGCGAGATTCCGTATC+AGG + chr7_4:3550384-3550403 Msa1135800:CDS 55.0%
CCAGGCGAGATTCCGTATCA+GGG + chr7_4:3550385-3550404 Msa1135800:CDS 55.0%
GGCCTGCCATATGATTGTGC+TGG - chr7_4:3550418-3550437 None:intergenic 55.0%
GGTGGCATGCCAAACAATGG+TGG - chr7_4:3550439-3550458 None:intergenic 55.0%
CCATGATACGGAATCTCGCC+TGG - chr7_4:3550511-3550530 None:intergenic 55.0%
CCAGGCGAGATTCCGTATCA+TGG + chr7_4:3550385-3550404 Msa1135800:CDS 55.0%
GGCCAGCCATATGATTGTGC+TGG - chr7_4:3550541-3550560 None:intergenic 55.0%
GGTGGCATGCCAAACAATGG+TGG - chr7_4:3550439-3550458 None:intergenic 55.0%
CCATGATACGGAATCTCGCC+TGG - chr7_4:3550511-3550530 None:intergenic 55.0%
CCAGGCGAGATTCCGTATCA+TGG + chr7_4:3550385-3550404 Msa1135800:CDS 55.0%
GGCCTGCCATATGATTGTGC+TGG - chr7_4:3550418-3550437 None:intergenic 55.0%
GGTGGCATGCCAAACAATGG+TGG - chr7_4:3550439-3550458 None:intergenic 55.0%
ACCAGGCGAGATTCCGTATC+AGG + chr7_4:3550384-3550403 Msa1135800:CDS 55.0%
CCAGGCGAGATTCCGTATCA+GGG + chr7_4:3550385-3550404 Msa1135800:CDS 55.0%
CTCCAGCACAATCACATGGC+AGG + chr7_4:3550782-3550801 Msa1135800:CDS 55.0%
CATGGCAGGCCACCATTGTA+TGG + chr7_4:3550796-3550815 Msa1135800:CDS 55.0%
GAAGGTGGCACGCCATACAA+TGG - chr7_4:3550319-3550338 None:intergenic 55.0%
TATGGCGTGCCACCTTCACA+AGG + chr7_4:3550322-3550341 Msa1135800:CDS 55.0%
! TGTCAGTGTCGGGTCGGTGT+TGG + chr7_4:3543484-3543503 Msa1135800:intron 60.0%
CTCAAGACCTCTCCCCTGCT+CGG + chr7_4:3545812-3545831 Msa1135800:CDS 60.0%
TCAAGACCTCTCCCCTGCTC+GGG + chr7_4:3545813-3545832 Msa1135800:CDS 60.0%
TCCCCTGCTCGGGCTATCAT+GGG + chr7_4:3545823-3545842 Msa1135800:CDS 60.0%
TCCCATGATAGCCCGAGCAG+GGG - chr7_4:3545827-3545846 None:intergenic 60.0%
GATCCCATGATAGCCCGAGC+AGG - chr7_4:3545829-3545848 None:intergenic 60.0%
AGGCCTCGAGCTACAAGTGC+AGG - chr7_4:3545919-3545938 None:intergenic 60.0%
CAATAGCCTGAGCAGGGGAG+AGG - chr7_4:3545939-3545958 None:intergenic 60.0%
CTCCCCTGCTCAGGCTATTG+TGG + chr7_4:3545939-3545958 Msa1135800:CDS 60.0%
!! TGGACTGGTTCCGGGTCTCA+TGG - chr7_4:3548108-3548127 None:intergenic 60.0%
!! AGATCCTTGTGGCGGACGGT+AGG - chr7_4:3549831-3549850 None:intergenic 60.0%
TACCGTCCGCCACAAGGATC+TGG + chr7_4:3549830-3549849 Msa1135800:CDS 60.0%
! CACCAGATCCTTGTGGCGGA+CGG - chr7_4:3549835-3549854 None:intergenic 60.0%
GGACCACCAGATCCTTGTGG+CGG - chr7_4:3549839-3549858 None:intergenic 60.0%
GGTGGACCACCAGATCCTTG+TGG - chr7_4:3549842-3549861 None:intergenic 60.0%
CCTTGCTGACCCCATAGTGG+TGG - chr7_4:3549860-3549879 None:intergenic 60.0%
CCACCACTATGGGGTCAGCA+AGG + chr7_4:3549857-3549876 Msa1135800:CDS 60.0%
GGCCTCACCAGAGTTTGCAG+GGG + chr7_4:3550026-3550045 Msa1135800:CDS 60.0%
GATAGAACTGGGATGCGGGG+CGG - chr7_4:3550122-3550141 None:intergenic 60.0%
GGGGATAGAACTGGGATGCG+GGG - chr7_4:3550125-3550144 None:intergenic 60.0%
GGGGGATAGAACTGGGATGC+GGG - chr7_4:3550126-3550145 None:intergenic 60.0%
TTGAGCCCAGGCTTGAGGGT+AGG - chr7_4:3550260-3550279 None:intergenic 60.0%
GGTGGCACGCCATACAATGG+TGG - chr7_4:3550316-3550335 None:intergenic 60.0%
GGATGCTGCCCTTGTGAAGG+TGG - chr7_4:3550334-3550353 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+TGG - chr7_4:3550369-3550388 None:intergenic 60.0%
CACCCTAGAGCCACTCAACC+AGG + chr7_4:3550367-3550386 Msa1135800:CDS 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG - chr7_4:3550372-3550391 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG - chr7_4:3550373-3550392 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG - chr7_4:3550380-3550399 None:intergenic 60.0%
CCCTGATACGGAATCTCGCC+TGG - chr7_4:3550388-3550407 None:intergenic 60.0%
CTAGGGGGGCCATAAGACTC+TGG - chr7_4:3550478-3550497 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+GGG - chr7_4:3550369-3550388 None:intergenic 60.0%
!! CCTGGTTGAGTGGCTCTAGG+GGG - chr7_4:3550370-3550389 None:intergenic 60.0%
!! GCCTGGTTGAGTGGCTCTAG+GGG - chr7_4:3550371-3550390 None:intergenic 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG - chr7_4:3550372-3550391 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG - chr7_4:3550373-3550392 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG - chr7_4:3550380-3550399 None:intergenic 60.0%
CTAGGGGGGCCATAAGACTC+TGG - chr7_4:3550478-3550497 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+GGG - chr7_4:3550369-3550388 None:intergenic 60.0%
!! CCTGGTTGAGTGGCTCTAGG+GGG - chr7_4:3550370-3550389 None:intergenic 60.0%
!! GCCTGGTTGAGTGGCTCTAG+GGG - chr7_4:3550371-3550390 None:intergenic 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG - chr7_4:3550372-3550391 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG - chr7_4:3550373-3550392 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG - chr7_4:3550380-3550399 None:intergenic 60.0%
CTAGGGGGGCCATAAGACTC+TGG - chr7_4:3550478-3550497 None:intergenic 60.0%
!! CTGGTTGAGTGGCTCTAGGG+GGG - chr7_4:3550369-3550388 None:intergenic 60.0%
!! CCTGGTTGAGTGGCTCTAGG+GGG - chr7_4:3550370-3550389 None:intergenic 60.0%
!! GCCTGGTTGAGTGGCTCTAG+GGG - chr7_4:3550371-3550390 None:intergenic 60.0%
! CGCCTGGTTGAGTGGCTCTA+GGG - chr7_4:3550372-3550391 None:intergenic 60.0%
TCGCCTGGTTGAGTGGCTCT+AGG - chr7_4:3550373-3550392 None:intergenic 60.0%
CGGAATCTCGCCTGGTTGAG+TGG - chr7_4:3550380-3550399 None:intergenic 60.0%
CCCTGATACGGAATCTCGCC+TGG - chr7_4:3550388-3550407 None:intergenic 60.0%
GGCCTGCCATGTGATTGTGC+TGG - chr7_4:3550787-3550806 None:intergenic 60.0%
GGTGGCACGCCATACAATGG+TGG - chr7_4:3550316-3550335 None:intergenic 60.0%
TAGGGTGGCCGCCATAAGAC+TGG - chr7_4:3550847-3550866 None:intergenic 60.0%
TGATAGCCCGAGCAGGGGAG+AGG - chr7_4:3545822-3545841 None:intergenic 65.0%
CTCCCCTGCTCGGGCTATCA+TGG + chr7_4:3545822-3545841 Msa1135800:CDS 65.0%
! GGGCAACAAGCTGTGCCGCT+AGG + chr7_4:3548363-3548382 Msa1135800:intron 65.0%
CGTCCGCCACAAGGATCTGG+TGG + chr7_4:3549833-3549852 Msa1135800:CDS 65.0%
GGCCCCTGCAAACTCTGGTG+AGG - chr7_4:3550031-3550050 None:intergenic 65.0%
GCCCAGGCTTGAGGGTAGGT+TGG - chr7_4:3550256-3550275 None:intergenic 65.0%
CCCCCTAGAGCCACTCAACC+AGG + chr7_4:3550490-3550509 Msa1135800:CDS 65.0%
CCCCCTAGAGCCACTCAACC+AGG + chr7_4:3550490-3550509 Msa1135800:CDS 65.0%
CCCCCTAGAGCCACTCAACC+AGG + chr7_4:3550490-3550509 Msa1135800:CDS 65.0%
TCGAGGCCTCTCCCCTGCTC+AGG + chr7_4:3545930-3545949 Msa1135800:CDS 70.0%
CAGGCCTACCGTCCGCCACA+AGG + chr7_4:3549824-3549843 Msa1135800:CDS 70.0%
AGGGCGGCCCCTGCAAACTC+TGG - chr7_4:3550036-3550055 None:intergenic 70.0%
AGGGGCCGCCCTCACACAAC+AGG + chr7_4:3550044-3550063 Msa1135800:CDS 70.0%
GGGGCCGCCCTCACACAACA+GGG + chr7_4:3550045-3550064 Msa1135800:CDS 70.0%
GGGCCGCCCTCACACAACAG+GGG + chr7_4:3550046-3550065 Msa1135800:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 3542932 3550867 3542932 ID=Msa1135800;Name=Msa1135800
chr7_4 mRNA 3542932 3550867 3542932 ID=Msa1135800-mRNA-1;Parent=Msa1135800;Name=Msa1135800-mRNA-1;_AED=0.28;_eAED=0.28;_QI=569|1|0.88|1|0.87|0.88|9|0|555
chr7_4 exon 3542932 3543108 3542932 ID=Msa1135800-mRNA-1:exon:1000;Parent=Msa1135800-mRNA-1
chr7_4 exon 3543594 3543871 3543594 ID=Msa1135800-mRNA-1:exon:1001;Parent=Msa1135800-mRNA-1
chr7_4 exon 3545166 3545300 3545166 ID=Msa1135800-mRNA-1:exon:1002;Parent=Msa1135800-mRNA-1
chr7_4 exon 3545394 3545438 3545394 ID=Msa1135800-mRNA-1:exon:1003;Parent=Msa1135800-mRNA-1
chr7_4 exon 3545616 3545687 3545616 ID=Msa1135800-mRNA-1:exon:1004;Parent=Msa1135800-mRNA-1
chr7_4 exon 3545781 3545999 3545781 ID=Msa1135800-mRNA-1:exon:1005;Parent=Msa1135800-mRNA-1
chr7_4 exon 3546523 3546639 3546523 ID=Msa1135800-mRNA-1:exon:1006;Parent=Msa1135800-mRNA-1
chr7_4 exon 3546765 3546881 3546765 ID=Msa1135800-mRNA-1:exon:1007;Parent=Msa1135800-mRNA-1
chr7_4 exon 3549791 3550867 3549791 ID=Msa1135800-mRNA-1:exon:1008;Parent=Msa1135800-mRNA-1
chr7_4 five_prime_UTR 3542932 3543108 3542932 ID=Msa1135800-mRNA-1:five_prime_utr;Parent=Msa1135800-mRNA-1
chr7_4 five_prime_UTR 3543594 3543871 3543594 ID=Msa1135800-mRNA-1:five_prime_utr;Parent=Msa1135800-mRNA-1
chr7_4 five_prime_UTR 3545166 3545279 3545166 ID=Msa1135800-mRNA-1:five_prime_utr;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3545280 3545300 3545280 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3545394 3545438 3545394 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3545616 3545687 3545616 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3545781 3545999 3545781 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3546523 3546639 3546523 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3546765 3546881 3546765 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
chr7_4 CDS 3549791 3550867 3549791 ID=Msa1135800-mRNA-1:cds;Parent=Msa1135800-mRNA-1
Gene Sequence

>Msa1135800

ATGGATGCCATGTTCACAGAGGCTGATGCTGGAGATTCTCCTGCACGTGAAGTTCCAAATGAGAAGGAGTTCAATTTGAATGATTTTTTGGAAAGTATAGATAAGGCAGAAAAGCTATTGGATGCCATGAGTGCAGAGGACGATGATGGAGGTTCTCCTGCATTTGTAGCTCAAGACCTCTCCCCTGCTCGGGCTATCATGGGATCTGATCAAATTCAAATACAAGTTCCAAATGAGAAGTTTGAAATTTCACAGGCTGATGCTGGAGGTTCTCCTGCACTTGTAGCTCGAGGCCTCTCCCCTGCTCAGGCTATTGTGGGATCTGATCAAATTCAGATACAAGTTCCAAATGAGAAATTGATACCTCAACATCTTCCCGAAGCCTATGATTCTAAAGAAAGGACTGTCCAAGTTACCGGTGATAAGAGGCAAATTGAAATTGCACAAGAAATGGCAAAGGAAGCCTTGAGTCAGTTGATACCTCAAGATCTTCCCGAAGCCGATGATTCTAAAGAAAGGACTGTCCAAGTTACTGGTGATAAGAGGCAAATTGCAATTGCACAAGAAATGACAAAGGAAGCCTTGAGTCAGCCTGTCAAGTCATCATCAGGTGGTTTCAGACAGCAGGCCTACCGTCCGCCACAAGGATCTGGTGGTCCACCACTATGGGGTCAGCAAGGTTCACATTATGGCCACCCACCATCATATTACTATCAGCATCGCTGGCCATATCCCTCTCATAATCAATCATATGCACCTACTCCTTATGGAAATTATCCTCAACATATGGCTCCAAGGAGCAGTTACGGTTCTGGTTGGGAGCAAAGGCCTCACCAGAGTTTGCAGGGGCCGCCCTCACACAACAGGGGTTATGATCATTATGGTGGACAAAGGGGTCATTCATCTGAAGTTACATCATCCGCCCCGCATCCCAGTTCTATCCCCCAACACTGTACCGGTCCTTATCCTTTACCCTCCATAGGTCCATCCCCAGTTCAGATTAATTACAATTACGAAAACCGTCCCCCTGCACAATATCCATATGGAGGACATCCAACCTACCCTCAAGCCTGGGCTCAAGCAAATCATGCACCTCCACAGCAGTATGGAAAGCCACCATTGTATGGCGTGCCACCTTCACAAGGGCAGCATCCACAGGCTTATGTCCACCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCAGGGTTCTACTCCAGCACAATCATATGGCAGGCCACCATTGTTTGGCATGCCACCTTCACAAGGACAACATCCAGAGTCTTATGGCCCCCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCATGGTTCTACTCCAGCACAATCATATGGCTGGCCACCATTGTTTGGCATGCCACCTTCACAAGGACAACATCCAGAGTCTTATGGCCCCCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCATGGTTCTACTCCAGCACAATCATATGGCAGGCCACCATTGTTTGGCATGCCACCTTCACAAGGACAACATCCAGAGTCTTATGGCCCCCCTAGAGCCACTCAACCAGGCGAGATTCCGTATCAGGGTTCTACTCCAGCACAATCACATGGCAGGCCACCATTGTATGGCGTGCCACCTTCACAAGGACAACATCCAGTCTTATGGCGGCCACCCTAG
Protein sequence

>Msa1135800

MDAMFTEADAGDSPAREVPNEKEFNLNDFLESIDKAEKLLDAMSAEDDDGGSPAFVAQDLSPARAIMGSDQIQIQVPNEKFEISQADAGGSPALVARGLSPAQAIVGSDQIQIQVPNEKLIPQHLPEAYDSKERTVQVTGDKRQIEIAQEMAKEALSQLIPQDLPEADDSKERTVQVTGDKRQIAIAQEMTKEALSQPVKSSSGGFRQQAYRPPQGSGGPPLWGQQGSHYGHPPSYYYQHRWPYPSHNQSYAPTPYGNYPQHMAPRSSYGSGWEQRPHQSLQGPPSHNRGYDHYGGQRGHSSEVTSSAPHPSSIPQHCTGPYPLPSIGPSPVQINYNYENRPPAQYPYGGHPTYPQAWAQANHAPPQQYGKPPLYGVPPSQGQHPQAYVHPRATQPGEIPYQGSTPAQSYGRPPLFGMPPSQGQHPESYGPPRATQPGEIPYHGSTPAQSYGWPPLFGMPPSQGQHPESYGPPRATQPGEIPYHGSTPAQSYGRPPLFGMPPSQGQHPESYGPPRATQPGEIPYQGSTPAQSHGRPPLYGVPPSQGQHPVLWRPP*