AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1203500


Find 440 sgRNAs with CRISPR-Local

Find 1250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_1 gene 57767806 57785700 57767806 ID=Msa1203500;Name=Msa1203500
chr8_1 mRNA 57767806 57785700 57767806 ID=Msa1203500-mRNA-1;Parent=Msa1203500;Name=Msa1203500-mRNA-1;_AED=0.08;_eAED=0.08;_QI=299|0.91|0.87|1|1|1|24|480|1574
chr8_1 exon 57767806 57768756 57767806 ID=Msa1203500-mRNA-1:exon:18883;Parent=Msa1203500-mRNA-1
chr8_1 exon 57769300 57769494 57769300 ID=Msa1203500-mRNA-1:exon:18882;Parent=Msa1203500-mRNA-1
chr8_1 exon 57769853 57771272 57769853 ID=Msa1203500-mRNA-1:exon:18881;Parent=Msa1203500-mRNA-1
chr8_1 exon 57772429 57772583 57772429 ID=Msa1203500-mRNA-1:exon:18880;Parent=Msa1203500-mRNA-1
chr8_1 exon 57772662 57772773 57772662 ID=Msa1203500-mRNA-1:exon:18879;Parent=Msa1203500-mRNA-1
chr8_1 exon 57775613 57775783 57775613 ID=Msa1203500-mRNA-1:exon:18878;Parent=Msa1203500-mRNA-1
chr8_1 exon 57775890 57775948 57775890 ID=Msa1203500-mRNA-1:exon:18877;Parent=Msa1203500-mRNA-1
chr8_1 exon 57776161 57776244 57776161 ID=Msa1203500-mRNA-1:exon:18876;Parent=Msa1203500-mRNA-1
chr8_1 exon 57777239 57777399 57777239 ID=Msa1203500-mRNA-1:exon:18875;Parent=Msa1203500-mRNA-1
chr8_1 exon 57777516 57777746 57777516 ID=Msa1203500-mRNA-1:exon:18874;Parent=Msa1203500-mRNA-1
chr8_1 exon 57777833 57777995 57777833 ID=Msa1203500-mRNA-1:exon:18873;Parent=Msa1203500-mRNA-1
chr8_1 exon 57778129 57778275 57778129 ID=Msa1203500-mRNA-1:exon:18872;Parent=Msa1203500-mRNA-1
chr8_1 exon 57778358 57778459 57778358 ID=Msa1203500-mRNA-1:exon:18871;Parent=Msa1203500-mRNA-1
chr8_1 exon 57779395 57779446 57779395 ID=Msa1203500-mRNA-1:exon:18870;Parent=Msa1203500-mRNA-1
chr8_1 exon 57780084 57780180 57780084 ID=Msa1203500-mRNA-1:exon:18869;Parent=Msa1203500-mRNA-1
chr8_1 exon 57781244 57781343 57781244 ID=Msa1203500-mRNA-1:exon:18868;Parent=Msa1203500-mRNA-1
chr8_1 exon 57781432 57781556 57781432 ID=Msa1203500-mRNA-1:exon:18867;Parent=Msa1203500-mRNA-1
chr8_1 exon 57781818 57781978 57781818 ID=Msa1203500-mRNA-1:exon:18866;Parent=Msa1203500-mRNA-1
chr8_1 exon 57782132 57782267 57782132 ID=Msa1203500-mRNA-1:exon:18865;Parent=Msa1203500-mRNA-1
chr8_1 exon 57782372 57782444 57782372 ID=Msa1203500-mRNA-1:exon:18864;Parent=Msa1203500-mRNA-1
chr8_1 exon 57782548 57782648 57782548 ID=Msa1203500-mRNA-1:exon:18863;Parent=Msa1203500-mRNA-1
chr8_1 exon 57782750 57782915 57782750 ID=Msa1203500-mRNA-1:exon:18862;Parent=Msa1203500-mRNA-1
chr8_1 exon 57783527 57783636 57783527 ID=Msa1203500-mRNA-1:exon:18861;Parent=Msa1203500-mRNA-1
chr8_1 exon 57785269 57785700 57785269 ID=Msa1203500-mRNA-1:exon:18860;Parent=Msa1203500-mRNA-1
chr8_1 five_prime_UTR 57785402 57785700 57785402 ID=Msa1203500-mRNA-1:five_prime_utr;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57785269 57785401 57785269 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57783527 57783636 57783527 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57782750 57782915 57782750 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57782548 57782648 57782548 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57782372 57782444 57782372 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57782132 57782267 57782132 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57781818 57781978 57781818 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57781432 57781556 57781432 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57781244 57781343 57781244 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57780084 57780180 57780084 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57779395 57779446 57779395 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57778358 57778459 57778358 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57778129 57778275 57778129 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57777833 57777995 57777833 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57777516 57777746 57777516 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57777239 57777399 57777239 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57776161 57776244 57776161 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57775890 57775948 57775890 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57775613 57775783 57775613 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57772662 57772773 57772662 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57772429 57772583 57772429 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57769853 57771272 57769853 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57769300 57769494 57769300 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 CDS 57768286 57768756 57768286 ID=Msa1203500-mRNA-1:cds;Parent=Msa1203500-mRNA-1
chr8_1 three_prime_UTR 57767806 57768285 57767806 ID=Msa1203500-mRNA-1:three_prime_utr;Parent=Msa1203500-mRNA-1
Gene Sequence

>Msa1203500

ATGGAGTGGAGTACGTTGCAGCATCTAGATCTACGCCATATAGGGCGTGGTGTTAGGCCGTTGCAGCCTCACGCTGCTTCGTTTCATCCTCATCAAGCTCTTGTTGCTGTTGCCATTGGAACTTACATCGTTGAATTTGATGCATTAACTGGAAGCAAGATTTCCGCTCTTGACATTGGTGCGCCTGCTGTTCGAATGTCTTACAGTCCAACAAGTGGACACACTGTGATTGCAATCCTCCAGGACTGTACAATACGTTCTTGTGATTTTGACTTGGAGCAAACTTGTGTTTTGCATTCACCTGAGAAAAAGTCCGAGCAAATTTCTTCTGATACAGAAGTTCATATGGCTTTAACCCCACTCCAACCTGTTGTGTTTTTTGGGTTCCATAAGAGAATGAGTGTTACAGTTGTTGGAACTGTTGAAGGCGGTCGAACGCCTACCAAAATCAAACCAGACCTGAAGAAGGCTATCGTAAATCTTGCTTGTCATCCTCGACTCCCTGTACTGTATGTTGCTTATGCAGAAGGTTTGATTCGGGCATATAACATTCATACCTATGCTGTTCATTACACACTTCAACTTGACAATACCATTAAGCTTATTGGGGCTGGTGCATTTGCATTTCATCCAACTCTGGAGTGGATTTTTGTTGGGGATCGGCAGGGTACACTTCTGGCATGGGATGTATCAACAGAGAGACCAAGTATGATTGGAATAAAACAAGTTGGCTCACAACCAATAAAATCAGTTGCGTTTCTCCCCACATTGCGTTTACTTGTGACTCTATCCAAGGATGGAAATCTACAAGTTTGGGAAACACGTGTTACAGTTAATCCTAATAGACCTTCTACACAGGCTAGTTTTTTTGAGCCTGCAGCAATTGAATCAATTGATATCCCTCGCATCCTTTCTCAACAGGGTGGAGAAGCAGTTTATCCATTGCCACGAATTAAAGCAATAGAATTTCATCCAAAATCGAATTTAGCTGCCCTAGTGTTTGCAAATGTGACAAGTGCTGAAACTTCAAAAAATAAGGCCTCATACAGTAGAGAAGGGAGAAAGCAACTTTTTGCTGTTTTACAAAGTGCAAGGGGATCTTCAGCATCTGTTATAAAGGAAAAACTTTCAGCCTTGGGATCATCTGGGGTGTTAGCAGACCATCAGCTTCAAGCTCAACTCCAAGAGCATCATCTAAAAGGCCATAGTAATCTTACAATATCAGACATTGCAAGGAAGGCATTTCTTTACAGTCATTTTATGGAAGGCCATATGAAAATCTCTCCAATATCACGCTTGCCCCTCATCACTGTTTTAGATACCAAGCATCATCTGAAGGACTTTCCAGTTTGTGAGCCATATCATTTGGAGCTAAATTTTTTTAATAAAGCAAACCGAGTTCTTCATTATCCATCCAGGGCGTTCTATATGGATGGATTGAACCTTATGGCACATAGCCTTTCGTCTGGGTCAGATATTATCTACAGGAAGCTCTATAATTTGATACCTGGAAATGTGGAGTACCGAGCTAAATATTTGATTCACAGTAAAAAGCAGCGCTTATTTCTTGTAGTTTATGAATTTAGTGGTTCTACAAATGAAGTTGTGCTTTACTGGGAAAATACTGATGTACAGACAGGAAACAGTAAAAGCAGTACAGTAAAAGGTCGAGATGCAGCATTTATTGGTTCCAATGAAAATCAGTTTGCTATACTTGATGAGGACAGGACAGGGTTAGCTCTATATACTCTGCCAGGAGGGACCTCCCAAGAAGTCAAGGACAATGATAAAGTTCTTGAAGAAAATCAACCTACAGAGACTAATGTTGGTTCAATTCGTGGCCCGACACCATTTATGTTTGAAACTGAAGTTGATCGTATCTTTTCTACGCCATTAGATTCTACTTTGATGTTTGCTTCTCATGGGAACCAAATTGGACTAGTAAAGCTCATTGAAGGGTACCGCTTATCAACTTCAACTGCCAATGGCCATTATATTTCCACCAAAAGTGATGGAAAAAAGTCAATTAAGTTAAAAAGAAACGAGATTGTACTTCAGGTGCACTGGCAAGAGACACTACGGGGAAATGTTGCTGGAATTTTAACGACACACAGAGTCCTTATTGTTTCGGCGGCACTCGATTATACTTGGTTGGGATGGAAAAGTGAGGCCTGTCCTATCAATCAGTATGCCATATGCAGATTGTTGCTCGCTAGCCCTACAGAAATAAATCCCAGACAGAAGAAGGGGGTAGAGATCAAAAGTTGCCTTGTTGGTCTTCTTGAGCCAATTCTTATTGGATTTGCCACAATGCAGCTAAGCTTTGAGCAGAAGCTTGATCTGTCAGAAATACTGTACCAAATAACGTCAAGGTTTGACAGTTTGCGCATAACACCAAGGTCTCTAGACATCCTTGCAAAAGGATCTCCGGTTTGTGGAGATTTAGCTGTCTCTTTATCACAATCAGGTCCGCAGTTCACGCAGGTGATGCGAGGTGTCTATGCTGTTAAAGCTCTTCGTTTTTCCACTGCTTTATCTGTTTTGAAAGATGAATTTCTACGTTCCAGAGATTATCCAAGATGTCCTCCCACATCTCATTTGTTTCATCGGTTCAGGCAGTTGGCTTATGCGTGTATCAGGTTTGGTCAATTTGATAGTGCAAAAGAAACATTTGAAACCATAGCAGACTATGAAGGCATGCTTGATCTGTTTATATGCCACCTTAATCCCAGCGCCATGCGGCGTCTTGCACAGAAATTGGAAGACGAAGGCCTTGATTCAGAATTGAGGCGGTATTGTGAAAGGATATTACGAGTTCGATCTACTGGATGGACACAAGGTATATTTGCCAACTTTGCTGCCGAGAGTATGGTTCCAAAAGGACCTGAATGGGGTGGTGGAAACTGGGAAATTAAAACCCCAACCACTGTGAAGGACATACCTCAGTGGGAACTTGCTGCAGAGGTGACGCCATACATGAAGACTGATGATGGTACGGTTCCATCCATTATTGTAGATCATATTGGTGTGTATTTAGGCTCAATTAAAGGAAGAGGTAATATTGTTGAGGTGAGGGAAGATAGTTTGGTCAAGGCCTTCATGCCAGCAGGCAATGACAATAAAGTAAATGGTCTTGAATTATCTTCAGTTAAATCCATATCTAATCAACCGAATGTGGTTGGTAATCCCAAAGGTGATTCATCGATGGGTCTGGAAAGCCTTAACAAACAGCTTGCCAATTCATCTGCTGATGAGCAGGCTAAAGCAGAAGAAGAATTTAAGAAATCTATGTACGGAGCTGCTGATGGTAGCAGTAGCGATGAAGAAGGAGCATCCAAAATTAAAAGAATACACATTAAAATACGAGACAAGCCAATTTCCTCTTCTACTGTGGATGTGAATAAGATTAAAGAAGCCACTAAACAGTTTAAACTTGGTGAAGGATTACCTCCACCAATGAGGACCAGGTCAAATAGCGGAAGCCAGGATCTTGGCCAGATTTTGTCCCTGCCACCAGCAACTACAGGAATTCCTACTGCTACTGTTTCAACTCCTGTTGACCTTTTTGGTACAGATGCCTCAACTCAACCAGAAATGATTTCACAGCCAACTACTGGGGCTGTGGGTGGGGGAGTTGCAACAGGGCCTATTCCAGAGGATTTCTTTCAGAATACAATTTCTTCTGTTCACGTTGCTGCATCACTGCCTCCTGCTGGAACTTTTCTCTCAAAATTCACTCCAGGGATTCAAACTAGCAATACTACAACTCCAAATCAAGCTAGTGCGACTGAAGCTGGTTTTGGTCTTCAAGGTGGTGTTTCCAATCAAGCCATTCAACAACCTGTTGTTCCGGTCGAGTCCATAGGACTTCCTGATGGTGGTGTCCCACCGCAGTCCATGCCTCAGGCTGCAGTCACGCCCCAACCTCAGTTGCAGCCTGCTCAGCCCCAAATTTCTAACCAGCCTCTTGATCTTAGCGTACTTGGAGTACCAAATTCAGCTGATTCAGGGAAGCTTCCACAAAGTGGTTCTGCACCAGTTTCCGTGCATCCTGGACAGGTTCCCCGTGGTGCTCCGGCTTCTGTATGTTTCAAGACTGGTCTTGCTCACTTGGAACTAAACCATCTTTCAGATGCGTTGTCTTGCTTTGATGAATCTTTTCTTGCATTGGCCAAGGAACAATCTCGTGGAAGTGATATAAAAGCTCAAGCGACAATTTGTGCTCAATATAAAATAGCAGTCACTCTTCTTCGGGAAATAGGACGTCTGCAGAGAGTCCATGGCCCAAGTGCAATCAGTGCAAAAGATGAGATGGCAAGACTTTCGCGTCATCTCGGTTCATTACCTCTTCTTGCCAAGCACAGAATAAATTGCATTCGAACTGCCATCAAAAGAAATATGGAGGTTCAAAATTATGCATATTCAAAGCAAATGCTGGAACTACTACTGTCCAAAGCACCTTCAAACAAGCAGGAGGAATTTAGGAGCCTGGTTGACCTATGTGTTCAGAGGGGTTTGACTAACAAGTCCATTGATCCCTTGGAAGATCCCTCGCAGTTCTGTTCTGCCACTTTAAGCAGACTGTCTACCATTGGATATGATGTATGTGATCTCTGTGGGGCCAAGTTTTCTGCCGTGACCGCTCCTGGATGCATCGTCTGTGGAATGGGAAGCATCAAAAGATCTGATGCTATTGCAGCATCAGTTCCTTCACCATTTGGTTGA

Protein sequence

>Msa1203500

MEWSTLQHLDLRHIGRGVRPLQPHAASFHPHQALVAVAIGTYIVEFDALTGSKISALDIGAPAVRMSYSPTSGHTVIAILQDCTIRSCDFDLEQTCVLHSPEKKSEQISSDTEVHMALTPLQPVVFFGFHKRMSVTVVGTVEGGRTPTKIKPDLKKAIVNLACHPRLPVLYVAYAEGLIRAYNIHTYAVHYTLQLDNTIKLIGAGAFAFHPTLEWIFVGDRQGTLLAWDVSTERPSMIGIKQVGSQPIKSVAFLPTLRLLVTLSKDGNLQVWETRVTVNPNRPSTQASFFEPAAIESIDIPRILSQQGGEAVYPLPRIKAIEFHPKSNLAALVFANVTSAETSKNKASYSREGRKQLFAVLQSARGSSASVIKEKLSALGSSGVLADHQLQAQLQEHHLKGHSNLTISDIARKAFLYSHFMEGHMKISPISRLPLITVLDTKHHLKDFPVCEPYHLELNFFNKANRVLHYPSRAFYMDGLNLMAHSLSSGSDIIYRKLYNLIPGNVEYRAKYLIHSKKQRLFLVVYEFSGSTNEVVLYWENTDVQTGNSKSSTVKGRDAAFIGSNENQFAILDEDRTGLALYTLPGGTSQEVKDNDKVLEENQPTETNVGSIRGPTPFMFETEVDRIFSTPLDSTLMFASHGNQIGLVKLIEGYRLSTSTANGHYISTKSDGKKSIKLKRNEIVLQVHWQETLRGNVAGILTTHRVLIVSAALDYTWLGWKSEACPINQYAICRLLLASPTEINPRQKKGVEIKSCLVGLLEPILIGFATMQLSFEQKLDLSEILYQITSRFDSLRITPRSLDILAKGSPVCGDLAVSLSQSGPQFTQVMRGVYAVKALRFSTALSVLKDEFLRSRDYPRCPPTSHLFHRFRQLAYACIRFGQFDSAKETFETIADYEGMLDLFICHLNPSAMRRLAQKLEDEGLDSELRRYCERILRVRSTGWTQGIFANFAAESMVPKGPEWGGGNWEIKTPTTVKDIPQWELAAEVTPYMKTDDGTVPSIIVDHIGVYLGSIKGRGNIVEVREDSLVKAFMPAGNDNKVNGLELSSVKSISNQPNVVGNPKGDSSMGLESLNKQLANSSADEQAKAEEEFKKSMYGAADGSSSDEEGASKIKRIHIKIRDKPISSSTVDVNKIKEATKQFKLGEGLPPPMRTRSNSGSQDLGQILSLPPATTGIPTATVSTPVDLFGTDASTQPEMISQPTTGAVGGGVATGPIPEDFFQNTISSVHVAASLPPAGTFLSKFTPGIQTSNTTTPNQASATEAGFGLQGGVSNQAIQQPVVPVESIGLPDGGVPPQSMPQAAVTPQPQLQPAQPQISNQPLDLSVLGVPNSADSGKLPQSGSAPVSVHPGQVPRGAPASVCFKTGLAHLELNHLSDALSCFDESFLALAKEQSRGSDIKAQATICAQYKIAVTLLREIGRLQRVHGPSAISAKDEMARLSRHLGSLPLLAKHRINCIRTAIKRNMEVQNYAYSKQMLELLLSKAPSNKQEEFRSLVDLCVQRGLTNKSIDPLEDPSQFCSATLSRLSTIGYDVCDLCGAKFSAVTAPGCIVCGMGSIKRSDAIAASVPSPFG*