AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0047000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047000 MtrunA17_Chr7g0245901 98.327 1793 22 2 1 1789 1 1789 0.0 3643
Msa0047000 MtrunA17_Chr8g0351691 83.857 1784 273 9 9 1789 13 1784 0.0 3044
Msa0047000 MtrunA17_Chr5g0448771 50.279 1792 772 21 8 1786 11 1696 0.0 1709
Msa0047000 MtrunA17_Chr4g0069791 37.853 1556 741 35 12 1523 30 1403 0.0 915
Msa0047000 MtrunA17_Chr3g0112241 26.161 1055 647 27 383 1409 357 1307 2.26e-97 347
Msa0047000 MtrunA17_Chr3g0112221 26.585 1057 640 26 383 1409 358 1308 2.26e-96 343
Msa0047000 MtrunA17_Chr5g0435701 24.848 1316 790 38 140 1409 142 1304 6.89e-93 333
Msa0047000 MtrunA17_Chr6g0485251 23.423 1110 680 36 226 1281 145 1138 1.08e-60 230
Msa0047000 MtrunA17_Chr1g0191121 19.747 633 373 16 867 1431 485 1050 2.40e-16 85.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047000 AT3G60860.1 75.694 1802 416 12 1 1789 1 1793 0.0 2729
Msa0047000 AT1G01960.1 72.950 1793 437 14 1 1789 1 1749 0.0 2624
Msa0047000 AT4G35380.1 46.633 1797 838 19 8 1785 11 1705 0.0 1582
Msa0047000 AT4G38200.1 50.885 1525 680 15 288 1785 203 1685 0.0 1531
Msa0047000 AT4G38200.1 35.878 262 141 5 1 259 1 238 3.17e-38 158
Msa0047000 AT4G38200.2 51.351 1295 568 12 511 1785 13 1265 0.0 1321
Msa0047000 AT4G35380.2 49.303 1292 598 12 511 1785 16 1267 0.0 1229
Msa0047000 AT3G43300.3 39.536 1467 710 36 67 1523 90 1389 0.0 915
Msa0047000 AT3G43300.3 26.939 245 144 9 1549 1785 1520 1737 4.98e-11 68.9
Msa0047000 AT3G43300.1 39.031 1486 710 37 67 1523 90 1408 0.0 903
Msa0047000 AT3G43300.1 26.939 245 144 9 1549 1785 1539 1756 5.76e-11 68.6
Msa0047000 AT3G43300.2 38.923 1467 707 36 67 1523 90 1377 0.0 886
Msa0047000 AT3G43300.2 26.939 245 144 9 1549 1785 1508 1725 4.73e-11 68.9
Msa0047000 AT1G13980.2 27.962 1055 628 26 383 1409 351 1301 1.47e-105 372
Msa0047000 AT1G13980.1 27.962 1055 628 26 383 1409 351 1301 1.47e-105 372
Msa0047000 AT5G39500.1 24.881 1053 658 26 383 1411 352 1295 2.36e-91 328
Msa0047000 AT5G39500.2 24.881 1053 658 26 383 1411 352 1295 2.36e-91 328
Msa0047000 AT5G19610.1 27.237 771 456 20 238 979 134 828 3.34e-67 251
Msa0047000 AT5G27970.3 22.353 680 383 23 880 1478 496 1111 8.87e-20 97.4
Msa0047000 AT5G27970.1 22.476 614 355 19 880 1431 509 1063 9.02e-20 97.4
Msa0047000 AT5G27970.4 22.439 615 355 19 880 1431 496 1051 1.13e-19 97.1
Msa0047000 AT5G27970.2 22.439 615 355 19 880 1431 510 1065 1.62e-19 96.7
Msa0047000 AT5G27970.5 22.439 615 350 20 880 1431 496 1046 5.85e-19 94.7

Find 391 sgRNAs with CRISPR-Local

Find 790 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTTCTGGTTTCCTTTAT+TGG 0.058275 1_1:+79535274 Msa0047000:CDS
TCTTCAGACTATTAGTAATT+TGG 0.137674 1_1:+79537183 Msa0047000:CDS
AGGACGATCATCTCTATTTC+TGG 0.171624 1_1:+79535261 Msa0047000:CDS
AAGGCTTCATAAATTCATTT+TGG 0.172494 1_1:-79534644 None:intergenic
ACTTGTTATGATATCTATTT+AGG 0.218049 1_1:+79526956 Msa0047000:CDS
CGCTCAAAGTTACAAGAGTT+TGG 0.220831 1_1:+79536866 Msa0047000:CDS
AGAAACTCAATTCCTTTCTT+TGG 0.225349 1_1:-79531204 None:intergenic
CAGCTTTGTCAGGAGGTCTT+AGG 0.233192 1_1:+79537028 Msa0047000:CDS
CTCTTTGTTAAATCTACTAT+TGG 0.252479 1_1:-79535069 None:intergenic
TACGAATCCGGCGGATTTGC+TGG 0.253919 1_1:+79527279 Msa0047000:CDS
CTTCAGACTATTAGTAATTT+GGG 0.276877 1_1:+79537184 Msa0047000:CDS
GTTCCTTCTAGGATGGTAAA+TGG 0.283520 1_1:+79530725 Msa0047000:intron
TTTGTTACCATTGGTTGTTC+AGG 0.295712 1_1:+79534531 Msa0047000:CDS
GACGCTTTATAAAGCTTATA+AGG 0.303842 1_1:-79536084 None:intergenic
AGATGTTAGTGATTGTCTTT+AGG 0.306765 1_1:+79527026 Msa0047000:CDS
CGTCATGCTATTGATCCTTC+AGG 0.308176 1_1:+79535905 Msa0047000:CDS
AGCCTTAACAAAGTCTATTA+TGG 0.310241 1_1:-79533858 None:intergenic
TCAGCACTAGAAAAGACTTT+TGG 0.314488 1_1:-79531504 None:intergenic
CGCATTCCCGATCCTCATTC+AGG 0.314583 1_1:+79530890 Msa0047000:CDS
CAATCCTATGGTGAAGAATA+AGG 0.316014 1_1:+79531578 Msa0047000:CDS
CGAGGAGAGGGATGATGATT+TGG 0.316789 1_1:+79527405 Msa0047000:CDS
ACAGTGGAGGGTCTTGCATT+TGG 0.316813 1_1:-79536898 None:intergenic
AACAGCAACCAAACATTTCA+TGG 0.318060 1_1:-79530831 None:intergenic
AACTAAAACAACTATTCTTC+CGG 0.318572 1_1:+79533622 Msa0047000:CDS
GCTGGGTTGAAAGCAGAAAT+TGG 0.334692 1_1:+79530335 Msa0047000:CDS
TTCTGGTTTCCTTTATTGGC+TGG 0.339409 1_1:+79535278 Msa0047000:CDS
GTCTATGAAGTCGCCGTCTA+AGG 0.344197 1_1:+79527492 Msa0047000:CDS
GATTGTCGTGGCGGAATTGA+TGG 0.348846 1_1:+79527087 Msa0047000:CDS
TTGTCTTGATTCACAGATAT+TGG 0.352870 1_1:+79530454 Msa0047000:CDS
TGATGATGCTATGGAGCTTT+TGG 0.354485 1_1:+79526856 Msa0047000:CDS
TCAGATTTCTTTGTTACCAT+TGG 0.360943 1_1:+79534522 Msa0047000:CDS
CTCGCTAGAAACTTCGATTC+AGG 0.363997 1_1:-79526797 None:intergenic
TGGTTAATTCCTCTAGGCTC+TGG 0.368515 1_1:+79537115 Msa0047000:CDS
TGAGTATCTGATCCTTCAAC+TGG 0.368600 1_1:-79530986 None:intergenic
GGCTCTTCGTCAAGGAATAA+AGG 0.369547 1_1:+79535155 Msa0047000:CDS
GGCTTATAAGCTAGAACTTC+AGG 0.370113 1_1:+79531060 Msa0047000:CDS
ACACCTCGATCATGAATCTA+AGG 0.373706 1_1:-79532393 None:intergenic
CGTGTCAACAATGTTAAATC+AGG 0.376670 1_1:+79534747 Msa0047000:CDS
AGGGGAGCTGGTGGATGGAG+AGG 0.378023 1_1:+79527378 Msa0047000:CDS
CAGTGGAGGGTCTTGCATTT+GGG 0.378076 1_1:-79536897 None:intergenic
TTTGCTGGATTCGACGGATA+AGG 0.384516 1_1:+79527294 Msa0047000:CDS
ATCAATTCCGCCACGACAAT+CGG 0.385243 1_1:-79527085 None:intergenic
AGGGAGGAAAGGGGAGCTGG+TGG 0.388702 1_1:+79527369 Msa0047000:CDS
ACCTTGATTGGTGATTATCT+TGG 0.388820 1_1:+79531303 Msa0047000:CDS
GCGTGGGGAGGACAGTCATA+TGG 0.390327 1_1:+79531893 Msa0047000:CDS
GCTCAAAGTTACAAGAGTTT+GGG 0.391698 1_1:+79536867 Msa0047000:CDS
TCGGCTGTAGCATCGGAATT+CGG 0.393989 1_1:-79526560 None:intergenic
AAGTCCTTACCAGCCAATAA+AGG 0.395110 1_1:-79535287 None:intergenic
CTCTGCCTTATCTCAGACCT+TGG 0.395472 1_1:-79535773 None:intergenic
CGGCTTTGGAAGGGAGGAAA+GGG 0.395862 1_1:+79527359 Msa0047000:CDS
GTAATAGCTCTGTGTCTTGA+AGG 0.397445 1_1:+79532475 Msa0047000:CDS
CTCATCAACGCGGCGAGCTC+CGG 0.398169 1_1:+79526680 Msa0047000:CDS
AAGGTATATCGCTCTTTAAT+AGG 0.398424 1_1:+79531178 Msa0047000:CDS
TATGCTCCCAAGCTTCTTGT+AGG 0.398490 1_1:-79533490 None:intergenic
AAAATAATGCAGGATATAGA+TGG 0.398909 1_1:+79527172 Msa0047000:CDS
AATAAAGGAAAGGAAACTTC+TGG 0.399811 1_1:+79535170 Msa0047000:CDS
CTCATCGACTGCGGATCAGC+GGG 0.400950 1_1:-79527520 None:intergenic
TTTGAGCATCTACATCTTCT+CGG 0.404413 1_1:+79533533 Msa0047000:CDS
GACTGTCCTCCCCACGCTTA+CGG 0.406849 1_1:-79531887 None:intergenic
ATACTTGGGAATGGCTTCTT+CGG 0.409163 1_1:+79526394 None:intergenic
AAAGAGGGGAGACAAGATAA+TGG 0.409725 1_1:+79535224 Msa0047000:CDS
GATGCTACAGCCGATGATTC+CGG 0.409830 1_1:+79526569 Msa0047000:CDS
TTTCCCATGGCAAATGGTAA+TGG 0.412091 1_1:+79530956 Msa0047000:CDS
AGCTTTGTCAGGAGGTCTTA+GGG 0.414138 1_1:+79537029 Msa0047000:CDS
TTTCAGCCTTACAAAGATAG+TGG 0.414212 1_1:+79533931 Msa0047000:CDS
TGACGAACATAATCGAAAAT+CGG 0.415261 1_1:-79535887 None:intergenic
TGGAGAGGTGGTCGAGGAGA+GGG 0.416405 1_1:+79527393 Msa0047000:CDS
AGGAAAGGGGAGCTGGTGGA+TGG 0.417135 1_1:+79527373 Msa0047000:CDS
TCAATTTCGCTTCGGATTCA+CGG 0.417220 1_1:+79526908 Msa0047000:CDS
CAGTCTCCACTTCATTGACC+TGG 0.422263 1_1:-79535937 None:intergenic
TATGTTGGATGCAAAGTATT+GGG 0.422829 1_1:+79527318 Msa0047000:CDS
CACTGTTCTTTAACAATGAT+AGG 0.423497 1_1:-79530244 None:intergenic
CATAATCGAAAATCGGGAAT+AGG 0.425208 1_1:-79535880 None:intergenic
AGTGATTGTCTTTAGGAGAA+TGG 0.425713 1_1:+79527033 Msa0047000:CDS
CGGTGAGTTACCCACTTTGT+GGG 0.425772 1_1:-79531235 None:intergenic
GGTCCTTTCTTCTTCAAAAC+CGG 0.425932 1_1:-79533641 None:intergenic
GGCTTGTGTGGTCAAGCATC+TGG 0.426123 1_1:+79534490 Msa0047000:CDS
CTTCAAGGCTTTAGACTGCC+TGG 0.426672 1_1:+79531420 Msa0047000:CDS
TTTCCCAATGATTGTTCTCA+GGG 0.427061 1_1:+79530364 Msa0047000:CDS
ACTTGAAGCCATGAAATGTT+TGG 0.430187 1_1:+79530823 Msa0047000:CDS
TGGGAAAATCTCCAGGTTCA+TGG 0.430581 1_1:-79530940 None:intergenic
GGTTGCGTAAGGTTTCAAAT+AGG 0.431295 1_1:-79535808 None:intergenic
ATTCATGATCGAGGTGTGTT+GGG 0.432968 1_1:+79532399 Msa0047000:CDS
CTGAAATTGACAGGCTGTGA+TGG 0.433126 1_1:+79536730 Msa0047000:intron
TTCTTGCCTGAATGAGGATC+GGG 0.434642 1_1:-79530896 None:intergenic
GATTCACTGCCTGTACTTGT+TGG 0.435110 1_1:-79531821 None:intergenic
GATGATTTGGAGATTCAGAT+TGG 0.437549 1_1:+79527418 Msa0047000:CDS
TCCACAGCTTCACCTAGAAC+TGG 0.439576 1_1:+79535200 Msa0047000:CDS
TATCAGATGTGTCTCTCAAA+TGG 0.440325 1_1:+79534716 Msa0047000:CDS
CCGGTGAGTTACCCACTTTG+TGG 0.441105 1_1:-79531236 None:intergenic
TGGAGTTTGATGAGGCAATC+AGG 0.441812 1_1:+79531391 Msa0047000:CDS
GAAGATGTAGATGCTCAAAT+CGG 0.446649 1_1:-79533529 None:intergenic
CGTGGGGAGGACAGTCATAT+GGG 0.447067 1_1:+79531894 Msa0047000:CDS
CAGTAACTTCAATTTCGCTT+CGG 0.448023 1_1:+79526900 Msa0047000:CDS
CAAAATGAAAGATGTTGATC+TGG 0.450199 1_1:+79531794 Msa0047000:CDS
CGCGGTGAAGCCGATGCTGC+TGG 0.451697 1_1:+79526767 Msa0047000:CDS
TATATTGAAGTAGCAGGCTC+TGG 0.453566 1_1:+79537055 Msa0047000:CDS
ACTATAATATGAACCGTATC+CGG 0.454260 1_1:+79534469 Msa0047000:CDS
GACGAACATAATCGAAAATC+GGG 0.455136 1_1:-79535886 None:intergenic
TCATCTAGTTCAGCTTTGTC+AGG 0.455532 1_1:+79537018 Msa0047000:CDS
CGTCCTCATCAAAGCCTGGC+TGG 0.461935 1_1:+79536103 Msa0047000:CDS
GGCCATAATAGACTTTGTTA+AGG 0.462561 1_1:+79533856 Msa0047000:CDS
TTGAATATGTTGGAACAAGT+TGG 0.463575 1_1:+79533782 Msa0047000:CDS
AGAAAAGCAGCAATATCTTC+CGG 0.464280 1_1:-79531255 None:intergenic
GAGAGGGAAGATTGTGGCAT+TGG 0.465759 1_1:+79527540 Msa0047000:CDS
AGAACCCTGAGAACAATCAT+TGG 0.467710 1_1:-79530368 None:intergenic
ATGCTCTATCTTCATCAGTC+TGG 0.468171 1_1:+79530298 Msa0047000:CDS
AGTTTCTAACTTGAATATGT+TGG 0.468934 1_1:+79533772 Msa0047000:CDS
GGAAGGGAGGAAAGGGGAGC+TGG 0.469658 1_1:+79527366 Msa0047000:CDS
TCCATCAGGTACGCCGAGTA+AGG 0.470388 1_1:+79527204 Msa0047000:CDS
TAGTATGTATAAGACGGCTT+TGG 0.471348 1_1:+79527345 Msa0047000:CDS
GGCTTTATGCAAGGTCTCCA+TGG 0.471365 1_1:+79533877 Msa0047000:CDS
ATAGGCATGCATTACTTTCA+AGG 0.471858 1_1:-79531343 None:intergenic
TTGGTGATTATCTTGGAGAA+AGG 0.473056 1_1:+79531310 Msa0047000:CDS
TTCGGAGATTGAATATCCTT+CGG 0.473272 1_1:-79526542 None:intergenic
TTTCTCATAACAATCACAAA+AGG 0.473659 1_1:-79534663 None:intergenic
ATCAGCACCTTCTTTAAAAG+TGG 0.476932 1_1:-79536058 None:intergenic
GCAATCAGGATGTTTCTTCA+AGG 0.477489 1_1:+79531405 Msa0047000:CDS
TTTATCTGATGCAAAATGTC+GGG 0.478088 1_1:+79536381 Msa0047000:CDS
TTCTCCATTACCATTTGCCA+TGG 0.478529 1_1:-79530960 None:intergenic
GTTGATAACGGCCATGAACC+TGG 0.478571 1_1:+79530929 Msa0047000:CDS
CATCAAAGCCTGGCTGGCAT+TGG 0.480740 1_1:+79536109 Msa0047000:CDS
TGGTGATTATCTTGGAGAAA+GGG 0.481288 1_1:+79531311 Msa0047000:CDS
GTCAATGAAATTTCTTGAGC+GGG 0.481380 1_1:+79534599 Msa0047000:CDS
CAATCTCCACTATCTTTGTA+AGG 0.481427 1_1:-79533937 None:intergenic
GACGATGACGTGGCTGAGAC+GGG 0.481472 1_1:-79526426 None:intergenic
CTGAGCTTAGCTTTGACCCA+AGG 0.484971 1_1:+79535756 Msa0047000:CDS
CCTCCATCATGAAGCGGTCC+AGG 0.486217 1_1:-79526611 None:intergenic
GACGTGGCTGAGACGGGAAT+CGG 0.486245 1_1:-79526420 None:intergenic
TAGGCATAAGTACTGCTTGA+TGG 0.486382 1_1:-79530225 None:intergenic
GTTTCAGTCTCAGTGATGTA+TGG 0.487207 1_1:-79535005 None:intergenic
GCCGAGTAAGGTTGTGGCGA+TGG 0.488307 1_1:+79527216 Msa0047000:CDS
CCATCGAGGAATGAAAAGTC+GGG 0.489015 1_1:-79536238 None:intergenic
GGACGATGACGTGGCTGAGA+CGG 0.490496 1_1:-79526427 None:intergenic
ATTTCTTGAGCGGGAAGAGT+TGG 0.491391 1_1:+79534608 Msa0047000:CDS
AACAACCGTGGCATAGATGA+TGG 0.492324 1_1:+79531711 Msa0047000:CDS
TCCAAGCCTAACAGTCTGTT+GGG 0.492429 1_1:-79531843 None:intergenic
GTGAATCCCAACAGACTGTT+AGG 0.492443 1_1:+79531837 Msa0047000:CDS
TTACAATTTCATCATCACTT+TGG 0.492539 1_1:-79532456 None:intergenic
AGAAACATCAGACGCCTCAT+TGG 0.493582 1_1:-79531020 None:intergenic
CCGCAATACCAATGCCAGCC+AGG 0.494190 1_1:-79536117 None:intergenic
GGAATTACCTACAAGAAGCT+TGG 0.494721 1_1:+79533483 Msa0047000:CDS
AGGATGGAAGAGCATGTTCA+TGG 0.495028 1_1:+79534767 Msa0047000:CDS
AGCCGATGATTCCGGTGAGC+CGG 0.495688 1_1:+79526577 Msa0047000:CDS
GATTCATGATCGAGGTGTGT+TGG 0.499466 1_1:+79532398 Msa0047000:CDS
GTCATGCTATTGATCCTTCA+GGG 0.499713 1_1:+79535906 Msa0047000:CDS
AAAGCAAAGAATGTGGCATC+TGG 0.501687 1_1:-79533569 None:intergenic
GAATTACCTACAAGAAGCTT+GGG 0.502287 1_1:+79533484 Msa0047000:CDS
TCAAATACTCTTTCCCATAA+CGG 0.502791 1_1:-79535851 None:intergenic
TAATATCAGCAGGAGAATGC+AGG 0.504066 1_1:-79532585 None:intergenic
TGGTATCAAGATTTAGAGCT+GGG 0.504299 1_1:+79530318 Msa0047000:CDS
TGGAGCTATCACATCAGAAC+AGG 0.504466 1_1:+79533739 Msa0047000:CDS
TCATATGATAGTGCTGGAAT+CGG 0.504584 1_1:+79533704 Msa0047000:CDS
ACCTTACTCGGCGTACCTGA+TGG 0.505296 1_1:-79527205 None:intergenic
GCCACGACAATCGGTTGAAT+CGG 0.506253 1_1:-79527076 None:intergenic
TCTGCCTTATCTCAGACCTT+GGG 0.506520 1_1:-79535772 None:intergenic
GCATAAAGACGGTCAGTCCT+CGG 0.506591 1_1:-79536355 None:intergenic
TCCAAGATAATCACCAATCA+AGG 0.507032 1_1:-79531304 None:intergenic
GTTCGTTTGATGAGTAATGC+TGG 0.507997 1_1:+79536145 Msa0047000:CDS
TTTAATAGGAAGCCAAAGAA+AGG 0.508509 1_1:+79531192 Msa0047000:CDS
ACCGCCCAAGGTGTCCCTCC+TGG 0.509145 1_1:+79530758 Msa0047000:CDS
GAACCCTGAGAACAATCATT+GGG 0.509263 1_1:-79530367 None:intergenic
GTTACTATTGCTGATGAGGA+TGG 0.509571 1_1:+79533461 Msa0047000:CDS
TGTGTTGAAGATCGCCGATC+CGG 0.510801 1_1:+79526703 Msa0047000:CDS
GGTCCAGGTAGTGAAACTTC+CGG 0.511737 1_1:-79526596 None:intergenic
ATGGAGAGGTGGTCGAGGAG+AGG 0.511838 1_1:+79527392 Msa0047000:CDS
ATCCAAGCCTAACAGTCTGT+TGG 0.512094 1_1:-79531844 None:intergenic
CATAAAGACGGTCAGTCCTC+GGG 0.514704 1_1:-79536354 None:intergenic
ACCTCAACCTCCTCATAGCT+TGG 0.516374 1_1:-79536989 None:intergenic
AAGATGTAGATGCTCAAATC+GGG 0.516978 1_1:-79533528 None:intergenic
CAACATGACCGTAGTAAAAG+AGG 0.517016 1_1:-79537331 None:intergenic
ATGCACGTTAGCCCTCCAAT+TGG 0.517623 1_1:+79535997 Msa0047000:CDS
TCAACATCAGATTTCTCCAC+TGG 0.517634 1_1:-79527112 None:intergenic
GGGTTGAACAAGACCTTGAT+TGG 0.517964 1_1:+79531291 Msa0047000:CDS
ATATGTTGGATGCAAAGTAT+TGG 0.519050 1_1:+79527317 Msa0047000:CDS
AGAAGTGGTCTTGTCACTAA+AGG 0.519802 1_1:+79536195 Msa0047000:CDS
CTGGTATCAAGATTTAGAGC+TGG 0.519998 1_1:+79530317 Msa0047000:CDS
GGCGGATTTGCTGGATTCGA+CGG 0.520119 1_1:+79527288 Msa0047000:CDS
TCCCAACAGACTGTTAGGCT+TGG 0.522216 1_1:+79531842 Msa0047000:CDS
AAAATTGAAGCAGTTGATAA+CGG 0.522307 1_1:+79530917 Msa0047000:CDS
AAAGACCTCAAGTATTCCTC+TGG 0.522452 1_1:-79531744 None:intergenic
CACTGACGCTCACAATCCTA+TGG 0.524414 1_1:+79531566 Msa0047000:CDS
TTCGTTTGATGAGTAATGCT+GGG 0.524961 1_1:+79536146 Msa0047000:CDS
ACAAGATAATGGAGAGGTGA+TGG 0.525382 1_1:+79535235 Msa0047000:CDS
GGTTAATTCCTCTAGGCTCT+GGG 0.526043 1_1:+79537116 Msa0047000:CDS
TTCTAATATTGAGCAACGCC+GGG 0.526684 1_1:+79531039 Msa0047000:CDS
TCCTTCAGGGAATAGCGCCC+AGG 0.527761 1_1:+79535919 Msa0047000:CDS
AAAGATCTACAACCAATTGG+AGG 0.528972 1_1:-79536009 None:intergenic
GGAATCATCGGCTGTAGCAT+CGG 0.529309 1_1:-79526567 None:intergenic
CCTGGCTGGCATTGGTATTG+CGG 0.529932 1_1:+79536117 Msa0047000:CDS
TTCTGTATCGCATCAACCGC+CGG 0.530389 1_1:-79526722 None:intergenic
GCATATCACTGAGAGCGACT+TGG 0.530659 1_1:-79537291 None:intergenic
ACGGCTTTGGAAGGGAGGAA+AGG 0.531555 1_1:+79527358 Msa0047000:CDS
CGACCTAGGTGATGATGCTA+TGG 0.532394 1_1:+79526847 Msa0047000:CDS
TGAAGTGAGGGTTTCAGTGA+CGG 0.532558 1_1:-79526519 None:intergenic
GACAGTTGAGACTACGAATC+CGG 0.533337 1_1:+79527267 Msa0047000:CDS
GATATGCTTAGTTTATCAGT+TGG 0.533929 1_1:+79537307 Msa0047000:CDS
CTGAAAACCCGCGGATCAGA+TGG 0.534133 1_1:-79533914 None:intergenic
TTTCTTGCCTGAATGAGGAT+CGG 0.534710 1_1:-79530897 None:intergenic
TTTGCCATGGGAAAATCTCC+AGG 0.534757 1_1:-79530947 None:intergenic
TTCGACGGATAAGGATATGT+TGG 0.535689 1_1:+79527303 Msa0047000:CDS
CTCATGGTAGACAGCAACAT+TGG 0.538157 1_1:+79537095 Msa0047000:CDS
TCTAGCGAGATTGATTGAAT+CGG 0.538223 1_1:+79526811 Msa0047000:CDS
GCTGCATACTGCATCCTCCC+AGG 0.538943 1_1:-79533662 None:intergenic
ACCAAGCTATGAGGAGGTTG+AGG 0.539462 1_1:+79536988 Msa0047000:CDS
TAGTGAAACTTCCGGCTCAC+CGG 0.539564 1_1:-79526588 None:intergenic
CATCTACATCTTCTCGGAGA+GGG 0.539659 1_1:+79533539 Msa0047000:CDS
TCACCTAGAACTGGAAAAGA+GGG 0.539756 1_1:+79535209 Msa0047000:CDS
CGTGGTTCATATGATAGTGC+TGG 0.539821 1_1:+79533698 Msa0047000:CDS
AAATGTGATGCATATTTGGT+AGG 0.540332 1_1:-79536939 None:intergenic
GGAATCGGCAGTAATGCTGC+TGG 0.540548 1_1:+79533719 Msa0047000:CDS
AATATTGTGGTCCGTAAGCG+TGG 0.540883 1_1:+79531876 Msa0047000:CDS
AGGTACGCCGAGTAAGGTTG+TGG 0.541065 1_1:+79527210 Msa0047000:CDS
ATGTATAAGACGGCTTTGGA+AGG 0.541241 1_1:+79527349 Msa0047000:CDS
TTCACCTAGAACTGGAAAAG+AGG 0.542258 1_1:+79535208 Msa0047000:CDS
GGTGGATGGAGAGGTGGTCG+AGG 0.544698 1_1:+79527387 Msa0047000:CDS
TCAACCTCCTCATAGCTTGG+TGG 0.545945 1_1:-79536986 None:intergenic
ACAATTGACACAATCTGTAA+AGG 0.546679 1_1:-79535033 None:intergenic
ATTTATCTGATGCAAAATGT+CGG 0.546991 1_1:+79536380 Msa0047000:CDS
TCTCATCGACTGCGGATCAG+CGG 0.547808 1_1:-79527521 None:intergenic
GGAGCTGGTGGATGGAGAGG+TGG 0.548042 1_1:+79527381 Msa0047000:CDS
CAACATTGGTTAATTCCTCT+AGG 0.549862 1_1:+79537109 Msa0047000:CDS
GGATAGTATATTGAATATTG+TGG 0.549942 1_1:+79531863 Msa0047000:CDS
TACACCAGGAGGGACACCTT+GGG 0.550361 1_1:-79530762 None:intergenic
TTCCGGCTCACCGGAATCAT+CGG 0.550605 1_1:-79526579 None:intergenic
TTATCAAGCTTGAGAGAAGA+GGG 0.550760 1_1:-79537243 None:intergenic
AATGGAGAAGACCCAGTTGA+AGG 0.550815 1_1:+79530974 Msa0047000:CDS
AAAGCGTCCTCATCAAAGCC+TGG 0.554139 1_1:+79536099 Msa0047000:CDS
GAGGTGGCCATGGTTGCGTA+AGG 0.554208 1_1:-79535819 None:intergenic
GCCATCGCCACAACCTTACT+CGG 0.554384 1_1:-79527217 None:intergenic
ATTCATCGAACATATTTGAA+AGG 0.554920 1_1:+79530510 Msa0047000:CDS
TCAGCACCTTCTTTAAAAGT+GGG 0.555099 1_1:-79536057 None:intergenic
GAGATCACCATCTGATCCGC+GGG 0.555790 1_1:+79533907 Msa0047000:CDS
CTCATCAATGCCCACAAAGT+GGG 0.556838 1_1:+79531225 Msa0047000:CDS
TCTAGTTCAGCTTTGTCAGG+AGG 0.561054 1_1:+79537021 Msa0047000:CDS
CTTATCAAGCTTGAGAGAAG+AGG 0.561864 1_1:-79537244 None:intergenic
TCATGTGAGCTAGACTCAGC+AGG 0.561923 1_1:-79536319 None:intergenic
CTTTGTTAAGGCTTTATGCA+AGG 0.562330 1_1:+79533868 Msa0047000:CDS
AAACTAGCTGAAGGAGACCT+TGG 0.563179 1_1:+79535134 Msa0047000:CDS
TTGACCACACAAGCCGGATA+CGG 0.564339 1_1:-79534482 None:intergenic
ACCATCGAGGAATGAAAAGT+CGG 0.565039 1_1:-79536239 None:intergenic
GGAGATTAGTATGTATAAGA+CGG 0.566854 1_1:+79527339 Msa0047000:CDS
TTTCTAATATTGAGCAACGC+CGG 0.567933 1_1:+79531038 Msa0047000:CDS
ACCAGGAGGGACACCTTGGG+CGG 0.569099 1_1:-79530759 None:intergenic
GAAGTTCTAGCTTATAAGCC+CGG 0.569233 1_1:-79531057 None:intergenic
CCCATAACGGCAGTGAAAAG+AGG 0.569785 1_1:-79535838 None:intergenic
TATCGCATCAACCGCCGGAT+CGG 0.571028 1_1:-79526717 None:intergenic
TGTCTTTAGGAGAATGGAGG+CGG 0.571714 1_1:+79527039 Msa0047000:CDS
TTGACCCAAGGTCTGAGATA+AGG 0.572307 1_1:+79535768 Msa0047000:CDS
CATCGACTGCGGATCAGCGG+GGG 0.573357 1_1:-79527518 None:intergenic
AATATCCTTCGGTGAAGTGA+GGG 0.574206 1_1:-79526531 None:intergenic
CACACCTTATTCTTCACCAT+AGG 0.574355 1_1:-79531582 None:intergenic
TTACTATTGCTGATGAGGAT+GGG 0.575258 1_1:+79533462 Msa0047000:CDS
TCAACAATGTTAAATCAGGA+TGG 0.575372 1_1:+79534751 Msa0047000:CDS
TCATCATCACTTTGGTCGAG+AGG 0.576329 1_1:-79532448 None:intergenic
GCTGATCCGCAGTCGATGAG+AGG 0.577581 1_1:+79527523 Msa0047000:CDS
AAGATCTACAACCAATTGGA+GGG 0.577866 1_1:-79536008 None:intergenic
TTCTCAAGTCGTAACAGTGG+AGG 0.577904 1_1:-79536911 None:intergenic
TCAAGGGATGGAGTTTGATG+AGG 0.577984 1_1:+79531383 Msa0047000:CDS
ATCGCTCCTCCATCATGAAG+CGG 0.578712 1_1:-79526617 None:intergenic
CGATGAGAAGTGGTTAGAAG+TGG 0.578815 1_1:+79536180 Msa0047000:CDS
CTACCTGGACCGCTTCATGA+TGG 0.579347 1_1:+79526608 Msa0047000:CDS
CACTTCTAACCACTTCTCAT+CGG 0.579353 1_1:-79536179 None:intergenic
GCAAAGAATGTGGCATCTGG+TGG 0.579661 1_1:-79533566 None:intergenic
GGGGAGACAAGATAATGGAG+AGG 0.580109 1_1:+79535229 Msa0047000:CDS
GATAGTTACTATTGCTGATG+AGG 0.581723 1_1:+79533457 Msa0047000:CDS
TGGTGATCTCAGTTCCTCCA+TGG 0.581999 1_1:-79533894 None:intergenic
AGGACATTCACCAGCAGCAT+CGG 0.582674 1_1:-79526777 None:intergenic
TCTGGAACACCAACAAGTAC+AGG 0.583363 1_1:+79531812 Msa0047000:CDS
TCTATGACAGTGTTTGTGCA+AGG 0.583896 1_1:+79527139 Msa0047000:CDS
GAATATCCTTCGGTGAAGTG+AGG 0.583973 1_1:-79526532 None:intergenic
AGCTTGATAAGTTGTGAACA+TGG 0.585463 1_1:+79537256 Msa0047000:CDS
CAAGTGTCTGAATCTTCTCA+TGG 0.585993 1_1:+79537079 Msa0047000:CDS
ATCTACATCTTCTCGGAGAG+GGG 0.586553 1_1:+79533540 Msa0047000:CDS
TTTAGAGTTGCCTCTTGAGG+CGG 0.586575 1_1:-79530800 None:intergenic
TCCAGTTCTAGGTGAAGCTG+TGG 0.586596 1_1:-79535201 None:intergenic
TCTCCATTACCATTTGCCAT+GGG 0.587650 1_1:-79530959 None:intergenic
AGATTGGTAATAAGCTGAGG+AGG 0.587948 1_1:+79527434 Msa0047000:CDS
AAGATTTCCTGAACAACCAA+TGG 0.589197 1_1:-79534538 None:intergenic
TAGCGCCCAGGTCAATGAAG+TGG 0.590211 1_1:+79535931 Msa0047000:CDS
GAGCTCGCCGCGTTGATGAG+AGG 0.591743 1_1:-79526677 None:intergenic
CTTTGATGCTATGCGTAATG+TGG 0.592427 1_1:+79536805 Msa0047000:CDS
ACGACGGATCAGATCATCAC+TGG 0.592493 1_1:-79531919 None:intergenic
TCTCAAGTCGTAACAGTGGA+GGG 0.593341 1_1:-79536910 None:intergenic
TCCGATTCAACCGATTGTCG+TGG 0.593468 1_1:+79527075 Msa0047000:CDS
ACCTGGGCGCTATTCCCTGA+AGG 0.594322 1_1:-79535920 None:intergenic
TTTGAAACCTTACGCAACCA+TGG 0.594910 1_1:+79535812 Msa0047000:CDS
GAGCCGGAAGTTTCACTACC+TGG 0.595363 1_1:+79526593 Msa0047000:CDS
TTTCATTGACAACTGACGCA+AGG 0.598599 1_1:-79534586 None:intergenic
ATGCTCAAATCGGGAAACAC+AGG 0.598733 1_1:-79533519 None:intergenic
TGAATTCTTCTTGCATACGA+CGG 0.599903 1_1:-79531935 None:intergenic
AGTCTCCACTTCATTGACCT+GGG 0.600252 1_1:-79535936 None:intergenic
GAGACCTTGGCTCTTCGTCA+AGG 0.600550 1_1:+79535147 Msa0047000:CDS
GAAAGTAATGCATGCCTATG+TGG 0.601884 1_1:+79531347 Msa0047000:CDS
CTGATCCGCAGTCGATGAGA+GGG 0.602486 1_1:+79527524 Msa0047000:CDS
TATTCCTTGACGAAGAGCCA+AGG 0.602752 1_1:-79535151 None:intergenic
ATACAGAAGCTGATTGCTGT+AGG 0.602783 1_1:+79526737 Msa0047000:CDS
CAGATAAATAAGCATAAAGA+CGG 0.603422 1_1:-79536366 None:intergenic
AGATGCTTGACCACACAAGC+CGG 0.603844 1_1:-79534488 None:intergenic
TTCGTCAAGGAATAAAGGAA+AGG 0.605949 1_1:+79535160 Msa0047000:CDS
GTCAATGAAGTGGAGACTGA+TGG 0.606495 1_1:+79535941 Msa0047000:CDS
CTATTTAGGTAGTAAGAATG+TGG 0.606504 1_1:+79526970 Msa0047000:CDS
ACGCTAAAAGCAGCTAACAT+TGG 0.608030 1_1:-79532424 None:intergenic
TATGAAGTCGCCGTCTAAGG+AGG 0.609331 1_1:+79527495 Msa0047000:CDS
GCAGTGAAAAGAGGTGGCCA+TGG 0.609490 1_1:-79535829 None:intergenic
GTGTGTAAATGTCACGACCT+AGG 0.609737 1_1:+79526833 Msa0047000:CDS
ACAATATCACAGAATAAGCA+AGG 0.610220 1_1:-79531539 None:intergenic
TGTCAATGAAATTTCTTGAG+CGG 0.610448 1_1:+79534598 Msa0047000:CDS
GTCGAATCCAGCAAATCCGC+CGG 0.613451 1_1:-79527286 None:intergenic
CTCTTGAGGCGGCAAAACTG+TGG 0.616155 1_1:-79530789 None:intergenic
TGTGCAACAAAACTAGCTGA+AGG 0.616510 1_1:+79535125 Msa0047000:CDS
GATGTCAATGAAGACACATC+GGG 0.616640 1_1:+79532528 Msa0047000:CDS
GGACAAACCACCAAGCTATG+AGG 0.616692 1_1:+79536979 Msa0047000:CDS
AGGCTTTAGACTGCCTGGTG+AGG 0.617131 1_1:+79531425 Msa0047000:CDS
GGACTTCTTAAAACCGCCCA+AGG 0.619097 1_1:+79530746 Msa0047000:CDS
TTACACCAGGAGGGACACCT+TGG 0.619111 1_1:-79530763 None:intergenic
CGAGAGCAGGGACGATGACG+TGG 0.620227 1_1:-79526436 None:intergenic
CTTCGTTTCCCAGAGCCTAG+AGG 0.621545 1_1:-79537124 None:intergenic
GGCGGAATTGATGGATCCAG+TGG 0.622504 1_1:+79527096 Msa0047000:CDS
ATATTGTGGTCCGTAAGCGT+GGG 0.623209 1_1:+79531877 Msa0047000:CDS
TGAACCGTATCCGGCTTGTG+TGG 0.623396 1_1:+79534478 Msa0047000:CDS
TCTCATCAATGCCCACAAAG+TGG 0.624406 1_1:+79531224 Msa0047000:CDS
TGTATAAGACGGCTTTGGAA+GGG 0.626185 1_1:+79527350 Msa0047000:CDS
ATAAGACGGCTTTGGAAGGG+AGG 0.629460 1_1:+79527353 Msa0047000:CDS
AATATCAGCAGGAGAATGCA+GGG 0.630191 1_1:-79532584 None:intergenic
ATCTTCCCTCTCATCGACTG+CGG 0.630559 1_1:-79527529 None:intergenic
TTCAGATTGGTAATAAGCTG+AGG 0.630987 1_1:+79527431 Msa0047000:CDS
TCTACATCTTCTCGGAGAGG+GGG 0.632966 1_1:+79533541 Msa0047000:CDS
GCGAGCTTGATCAAGATGCA+TGG 0.633713 1_1:+79535963 Msa0047000:CDS
GCTCCATAGCATCATCACCT+AGG 0.633823 1_1:-79526850 None:intergenic
GATTGGTAATAAGCTGAGGA+GGG 0.634012 1_1:+79527435 Msa0047000:CDS
CCACAAAGTGGGTAACTCAC+CGG 0.634397 1_1:+79531236 Msa0047000:CDS
CCTGGACCGCTTCATGATGG+AGG 0.634967 1_1:+79526611 Msa0047000:CDS
AAAGTCAAAAGAATCCACAT+AGG 0.635411 1_1:-79531361 None:intergenic
GTCGATGAGAGGGAAGATTG+TGG 0.635888 1_1:+79527534 Msa0047000:CDS
GTTGAAGATCGCCGATCCGG+CGG 0.637889 1_1:+79526706 Msa0047000:CDS
GATTCAACCGATTGTCGTGG+CGG 0.638327 1_1:+79527078 Msa0047000:CDS
ATTGACACAATCTGTAAAGG+TGG 0.638809 1_1:-79535030 None:intergenic
AAAACTGTGGTTGTTACACC+AGG 0.639031 1_1:-79530776 None:intergenic
TGATGTCAATGAAGACACAT+CGG 0.639531 1_1:+79532527 Msa0047000:CDS
ATTACTAATAGTCTGAAGAG+TGG 0.639943 1_1:-79537179 None:intergenic
TCATTCTGAAATATCCAATG+AGG 0.641714 1_1:+79531006 Msa0047000:CDS
TAATGGAGAGGTGATGGACA+AGG 0.642641 1_1:+79535241 Msa0047000:CDS
TGTGGTCCGTAAGCGTGGGG+AGG 0.642676 1_1:+79531881 Msa0047000:CDS
TGAGATCACCATCTGATCCG+CGG 0.643447 1_1:+79533906 Msa0047000:CDS
ATGCCAGCCAGGCTTTGATG+AGG 0.644604 1_1:-79536106 None:intergenic
GATTGTCTTTAGGAGAATGG+AGG 0.649902 1_1:+79527036 Msa0047000:CDS
ATGATAATGCAGAAAGCCCG+AGG 0.650516 1_1:+79536338 Msa0047000:CDS
ACAGAATCGAAGGAAAGTGA+TGG 0.651435 1_1:-79535105 None:intergenic
AGCATCAAAGAGGACTAGCA+TGG 0.652129 1_1:-79536792 None:intergenic
TGAAACCCTCACTTCACCGA+AGG 0.653545 1_1:+79526526 Msa0047000:CDS
GGCTTTGGAAGGGAGGAAAG+GGG 0.653848 1_1:+79527360 Msa0047000:CDS
GTGGGGAGGACAGTCATATG+GGG 0.655751 1_1:+79531895 Msa0047000:CDS
CTGAGGAAAAGCAAAGAATG+TGG 0.661494 1_1:-79533576 None:intergenic
CAGCATCGGCTTCACCGCGG+AGG 0.665534 1_1:-79526763 None:intergenic
TATTGTGGTCCGTAAGCGTG+GGG 0.666676 1_1:+79531878 Msa0047000:CDS
ACTGTGGTTGTTACACCAGG+AGG 0.668524 1_1:-79530773 None:intergenic
TCATCGACTGCGGATCAGCG+GGG 0.668977 1_1:-79527519 None:intergenic
CATCGAGGAATGAAAAGTCG+GGG 0.670061 1_1:-79536237 None:intergenic
ATAACGGCAGTGAAAAGAGG+TGG 0.674174 1_1:-79535835 None:intergenic
ATCGGCGATCTTCAACACAC+CGG 0.676397 1_1:-79526699 None:intergenic
TCATTCTCAAGTCGTAACAG+TGG 0.677774 1_1:-79536914 None:intergenic
CATTACGCATAGCATCAAAG+AGG 0.678669 1_1:-79536802 None:intergenic
AATCCTTAGATTCATGATCG+AGG 0.681965 1_1:+79532390 Msa0047000:CDS
ATATACCAGAGGAATACTTG+AGG 0.682518 1_1:+79531739 Msa0047000:CDS
TGATGGAAAAGATATACCAG+AGG 0.682725 1_1:+79531728 Msa0047000:CDS
GCATCTACATCTTCTCGGAG+AGG 0.683207 1_1:+79533538 Msa0047000:CDS
GTTGTGGCGATGGCTCATGA+TGG 0.684591 1_1:+79527226 Msa0047000:CDS
CTGTGGTTGTTACACCAGGA+GGG 0.684960 1_1:-79530772 None:intergenic
TTTGTAAGGCTGAAAACCCG+CGG 0.687177 1_1:-79533923 None:intergenic
GAGTATCTGATCCTTCAACT+GGG 0.690537 1_1:-79530985 None:intergenic
TGAAGAGTGGTCACTATGAG+TGG 0.694410 1_1:-79537166 None:intergenic
GCAGCTACCACATTGATGCG+TGG 0.694858 1_1:+79533680 Msa0047000:CDS
CACCTAGAACTGGAAAAGAG+GGG 0.696679 1_1:+79535210 Msa0047000:CDS
CAAACCACCAAGCTATGAGG+AGG 0.699823 1_1:+79536982 Msa0047000:CDS
TGAAGAAGAAAGGACCTGGG+AGG 0.701633 1_1:+79533648 Msa0047000:CDS
TTTATGCAAGGTCTCCATGG+AGG 0.706970 1_1:+79533880 Msa0047000:CDS
GAGTCAAAAGTTGAATAGTG+AGG 0.707269 1_1:+79533835 Msa0047000:CDS
TCGTTTGATGAGTAATGCTG+GGG 0.708020 1_1:+79536147 Msa0047000:CDS
AAATGAATCGAATATTCACA+CGG 0.714294 1_1:+79533813 Msa0047000:CDS
TTGTGAACATGGATCAACAG+AGG 0.715986 1_1:+79537267 Msa0047000:CDS
TTGGTGGTTTGTCCACAACG+AGG 0.717064 1_1:-79536970 None:intergenic
TCACAAAATCTCCACCATCG+AGG 0.719194 1_1:-79536252 None:intergenic
AGTTGAGACTACGAATCCGG+CGG 0.727110 1_1:+79527270 Msa0047000:CDS
ATATGAACCACGCATCAATG+TGG 0.728221 1_1:-79533687 None:intergenic
GAATGTGGTGAATCAAACGA+CGG 0.729456 1_1:+79526985 Msa0047000:CDS
CAGCAGCATCGGCTTCACCG+CGG 0.733179 1_1:-79526766 None:intergenic
ATTGCTGTAGGTTACCTCCG+CGG 0.735072 1_1:+79526749 Msa0047000:CDS
ATGTAACATGAATAGCATAG+CGG 0.776906 1_1:-79532501 None:intergenic
ATCAGCAGGAGAATGCAGGG+AGG 0.778320 1_1:-79532581 None:intergenic
TCTATCTCCTCTCATCAACG+CGG 0.785792 1_1:+79526670 Msa0047000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTATATTATTAATTA+AGG + chr1_1:79528358-79528377 Msa0047000:intron 0.0%
!!! TTTAATTGTAATAGATATTT+TGG + chr1_1:79528233-79528252 Msa0047000:intron 10.0%
!! ACATATATAAAAATAAAAAG+TGG + chr1_1:79533196-79533215 Msa0047000:intron 10.0%
!!! ATCTTTTATTAGTATTTTTA+CGG + chr1_1:79536517-79536536 Msa0047000:intron 10.0%
!!! TTTTATAACAAAAATAATGC+AGG + chr1_1:79527162-79527181 Msa0047000:CDS 15.0%
!! ATTAAAATTAAGAATGAACA+AGG - chr1_1:79529596-79529615 None:intergenic 15.0%
!!! GATGTGTTTTTTTTTTTTTT+TGG + chr1_1:79529705-79529724 Msa0047000:intron 15.0%
!! ACTGTTATTAAAATTAAGAA+TGG - chr1_1:79529897-79529916 None:intergenic 15.0%
!! ATACAGTAATGAAATTAAAA+GGG - chr1_1:79530081-79530100 None:intergenic 15.0%
!! TACATAAAATGCTAATAAAT+TGG - chr1_1:79530605-79530624 None:intergenic 15.0%
!! TTAGACAAAAATATTATCAT+CGG - chr1_1:79532002-79532021 None:intergenic 15.0%
!! ATTTATTTGCTTAAATTTGT+AGG + chr1_1:79532338-79532357 Msa0047000:intron 15.0%
!! TTATATCATGAAAAATATCA+AGG - chr1_1:79532946-79532965 None:intergenic 15.0%
!!! CAACAAATTGAATTAATTTT+TGG + chr1_1:79534071-79534090 Msa0047000:intron 15.0%
!!! ACTTGTTATGATATCTATTT+AGG + chr1_1:79526956-79526975 Msa0047000:CDS 20.0%
!! TTAGCATCTTATATTAGTTA+GGG + chr1_1:79527719-79527738 Msa0047000:intron 20.0%
!! TTATAGTTGTGAGTTAAATA+TGG + chr1_1:79527787-79527806 Msa0047000:intron 20.0%
!! ACTTAATTACCATTGATATA+TGG + chr1_1:79527955-79527974 Msa0047000:intron 20.0%
!! CTTAATTACCATTGATATAT+GGG + chr1_1:79527956-79527975 Msa0047000:intron 20.0%
!! TAGTCATTGAAAATATGAAA+AGG - chr1_1:79528261-79528280 None:intergenic 20.0%
!!! AATGATTAGTACTTAAGTTT+TGG + chr1_1:79529157-79529176 Msa0047000:intron 20.0%
!! ATTAAAATTAAGAATGGACA+GGG - chr1_1:79529891-79529910 None:intergenic 20.0%
!! TATTAAAATTAAGAATGGAC+AGG - chr1_1:79529892-79529911 None:intergenic 20.0%
!! TAATAATCATATGCAATTCA+TGG - chr1_1:79529978-79529997 None:intergenic 20.0%
!!! AAATACTATTGTGTTTCTAA+TGG + chr1_1:79530011-79530030 Msa0047000:intron 20.0%
!! GATACAGTAATGAAATTAAA+AGG - chr1_1:79530082-79530101 None:intergenic 20.0%
!!! TGCAATTTTACATTTATAGA+TGG + chr1_1:79530575-79530594 Msa0047000:intron 20.0%
!!! TTGTTTTTTATGAAATCTTC+AGG - chr1_1:79531696-79531715 None:intergenic 20.0%
!! TTTGTGTCAAAAATAGAATA+AGG - chr1_1:79532050-79532069 None:intergenic 20.0%
!! TTATATCATGAAAGATAACA+AGG - chr1_1:79532809-79532828 None:intergenic 20.0%
!! ATCCATTTAAGAACAAAAAA+AGG - chr1_1:79532834-79532853 None:intergenic 20.0%
!!! CTAAAAATGATTTTAAGCAA+AGG - chr1_1:79533298-79533317 None:intergenic 20.0%
!!! CTTTGCTTAAAATCATTTTT+AGG + chr1_1:79533296-79533315 Msa0047000:intron 20.0%
!!! AAATTGTAGGTTGAAAAAAT+TGG + chr1_1:79534165-79534184 Msa0047000:intron 20.0%
!!! TTATTTTACAACAATTGAAC+GGG - chr1_1:79534198-79534217 None:intergenic 20.0%
!!! GTTATTTTACAACAATTGAA+CGG - chr1_1:79534199-79534218 None:intergenic 20.0%
!! TCAATTGTTGTAAAATAACA+TGG + chr1_1:79534200-79534219 Msa0047000:intron 20.0%
!! CAATTGTTGTAAAATAACAT+GGG + chr1_1:79534201-79534220 Msa0047000:intron 20.0%
!! ACAAATTGTTATCCAAAAAA+AGG - chr1_1:79534245-79534264 None:intergenic 20.0%
!!! TTTTTGGATAACAATTTGTA+AGG + chr1_1:79534246-79534265 Msa0047000:intron 20.0%
!! TATTCATCTGAAAAAAATTC+AGG + chr1_1:79534331-79534350 Msa0047000:intron 20.0%
!!! ATTGTTTGCTTTTGATTGTA+AGG + chr1_1:79526933-79526952 Msa0047000:CDS 25.0%
! AAAATAATGCAGGATATAGA+TGG + chr1_1:79527172-79527191 Msa0047000:CDS 25.0%
! GTTAGCATCTTATATTAGTT+AGG + chr1_1:79527718-79527737 Msa0047000:intron 25.0%
! TAGTATTACTATTACCATCT+TGG - chr1_1:79527881-79527900 None:intergenic 25.0%
! ATATTTATCAACGTGACAAA+AGG - chr1_1:79528142-79528161 None:intergenic 25.0%
!!! TTTTGTCACGTTGATAAATA+TGG + chr1_1:79528141-79528160 Msa0047000:intron 25.0%
! CTTATACATCTACTACATAT+GGG - chr1_1:79528176-79528195 None:intergenic 25.0%
! TCTTATACATCTACTACATA+TGG - chr1_1:79528177-79528196 None:intergenic 25.0%
!!! TTTTGGTTTTACAATCCTTT+AGG + chr1_1:79528710-79528729 Msa0047000:intron 25.0%
!! TTCTTCTTTTGTCTTGAAAT+AGG - chr1_1:79529267-79529286 None:intergenic 25.0%
! CGATTAACGAAGTAATTATA+GGG - chr1_1:79529355-79529374 None:intergenic 25.0%
! ACGATTAACGAAGTAATTAT+AGG - chr1_1:79529356-79529375 None:intergenic 25.0%
! GTTAAAATTGAGAATGGAAT+AGG - chr1_1:79529412-79529431 None:intergenic 25.0%
!!! GACTAGAAATTTTTAAGATC+GGG - chr1_1:79529487-79529506 None:intergenic 25.0%
!!! GGACTAGAAATTTTTAAGAT+CGG - chr1_1:79529488-79529507 None:intergenic 25.0%
!!! TCTTAAAAATTTCTAGTCCT+AGG + chr1_1:79529489-79529508 Msa0047000:intron 25.0%
!!! TCTTACTTTTTCTGCTTTTT+AGG + chr1_1:79530103-79530122 Msa0047000:intron 25.0%
!! ACTTTATTGTGATACTTTTC+TGG + chr1_1:79530150-79530169 Msa0047000:intron 25.0%
!! ATCATCTTTTGCTGAAAATT+AGG - chr1_1:79530410-79530429 None:intergenic 25.0%
! ATTCATCGAACATATTTGAA+AGG + chr1_1:79530510-79530529 Msa0047000:CDS 25.0%
!! AGCATTTTATGTATTTGAGT+TGG + chr1_1:79530612-79530631 Msa0047000:intron 25.0%
! TTAATCATTATGTTCCTTCT+AGG + chr1_1:79530714-79530733 Msa0047000:intron 25.0%
!!! AAAATTGAAGCAGTTGATAA+CGG + chr1_1:79530917-79530936 Msa0047000:CDS 25.0%
! ACAAAAAATTGATCGAATCA+TGG + chr1_1:79531449-79531468 Msa0047000:CDS 25.0%
! GGATAGTATATTGAATATTG+TGG + chr1_1:79531863-79531882 Msa0047000:CDS 25.0%
! TCTTCTCAAGATATTGAAAT+AGG - chr1_1:79532287-79532306 None:intergenic 25.0%
! TTACAATTTCATCATCACTT+TGG - chr1_1:79532459-79532478 None:intergenic 25.0%
!!! GTCCTTTTTTTGTTCTTAAA+TGG + chr1_1:79532829-79532848 Msa0047000:intron 25.0%
! GCAAAAAGTAACACAAAAAA+AGG - chr1_1:79532971-79532990 None:intergenic 25.0%
! TTGATTGAACTCAAATAGAA+AGG - chr1_1:79533226-79533245 None:intergenic 25.0%
! TATACTTAATTGTCATGTGT+AGG + chr1_1:79533341-79533360 Msa0047000:intron 25.0%
! AACTAAAACAACTATTCTTC+CGG + chr1_1:79533622-79533641 Msa0047000:CDS 25.0%
! AGTTTCTAACTTGAATATGT+TGG + chr1_1:79533772-79533791 Msa0047000:CDS 25.0%
! AAATGAATCGAATATTCACA+CGG + chr1_1:79533813-79533832 Msa0047000:CDS 25.0%
!!! AATTTGTTTTGCAATAGATG+GGG - chr1_1:79534150-79534169 None:intergenic 25.0%
!!! CAATTTGTTTTGCAATAGAT+GGG - chr1_1:79534151-79534170 None:intergenic 25.0%
!!! ACAATTTGTTTTGCAATAGA+TGG - chr1_1:79534152-79534171 None:intergenic 25.0%
! TCTATTGCAAAACAAATTGT+AGG + chr1_1:79534152-79534171 Msa0047000:intron 25.0%
!! AACGTTATCTTATGATTTTG+TGG + chr1_1:79534363-79534382 Msa0047000:intron 25.0%
!! AAGGCTTCATAAATTCATTT+TGG - chr1_1:79534647-79534666 None:intergenic 25.0%
! TTTCTCATAACAATCACAAA+AGG - chr1_1:79534666-79534685 None:intergenic 25.0%
! CTCTTTGTTAAATCTACTAT+TGG - chr1_1:79535072-79535091 None:intergenic 25.0%
! TGCTAAAAAGATTAGTACTT+TGG + chr1_1:79535368-79535387 Msa0047000:intron 25.0%
! TTCTTACAACTAGAATATAC+TGG - chr1_1:79535684-79535703 None:intergenic 25.0%
! TAAAAAGATCTACAACCAAT+TGG - chr1_1:79536015-79536034 None:intergenic 25.0%
! CAGATAAATAAGCATAAAGA+CGG - chr1_1:79536369-79536388 None:intergenic 25.0%
! ATTTATCTGATGCAAAATGT+CGG + chr1_1:79536380-79536399 Msa0047000:CDS 25.0%
!!! TATGATACTCTTTTTTGGTA+TGG - chr1_1:79536456-79536475 None:intergenic 25.0%
!!! GTTTCTATGATACTCTTTTT+TGG - chr1_1:79536461-79536480 None:intergenic 25.0%
! TTCTATGGAAGATATAATTG+TGG - chr1_1:79536661-79536680 None:intergenic 25.0%
!!! ACATCTCTATTCTATTTCTA+TGG - chr1_1:79536676-79536695 None:intergenic 25.0%
! GTAAAAATGTGATGCATATT+TGG - chr1_1:79536946-79536965 None:intergenic 25.0%
! TCTTCAGACTATTAGTAATT+TGG + chr1_1:79537183-79537202 Msa0047000:CDS 25.0%
! CTTCAGACTATTAGTAATTT+GGG + chr1_1:79537184-79537203 Msa0047000:CDS 25.0%
!!! TAGTTCTTTTGAGAAAAATC+TGG + chr1_1:79537210-79537229 Msa0047000:CDS 25.0%
CTATTTAGGTAGTAAGAATG+TGG + chr1_1:79526970-79526989 Msa0047000:CDS 30.0%
AGATGTTAGTGATTGTCTTT+AGG + chr1_1:79527026-79527045 Msa0047000:CDS 30.0%
ATATGTTGGATGCAAAGTAT+TGG + chr1_1:79527317-79527336 Msa0047000:CDS 30.0%
! TATGTTGGATGCAAAGTATT+GGG + chr1_1:79527318-79527337 Msa0047000:CDS 30.0%
GGAGATTAGTATGTATAAGA+CGG + chr1_1:79527339-79527358 Msa0047000:CDS 30.0%
! GGAGTTGTTGAAAATTTTGT+TGG + chr1_1:79527561-79527580 Msa0047000:CDS 30.0%
! AAAATTTTGTTGGAGAATGC+TGG + chr1_1:79527571-79527590 Msa0047000:CDS 30.0%
ATCAACACAGAGTAAATAGA+AGG - chr1_1:79527631-79527650 None:intergenic 30.0%
! ATTTCGCTGTACCTTTATTT+AGG + chr1_1:79527671-79527690 Msa0047000:intron 30.0%
! TTTCGCTGTACCTTTATTTA+GGG + chr1_1:79527672-79527691 Msa0047000:intron 30.0%
TGTGAGTTAAATATGGTACT+TGG + chr1_1:79527794-79527813 Msa0047000:intron 30.0%
ATAGACATGACTACATTATG+TGG + chr1_1:79527822-79527841 Msa0047000:intron 30.0%
TTACTTTCAAACTTCCAAGA+TGG + chr1_1:79527864-79527883 Msa0047000:intron 30.0%
! CTTTGTTTCCCATATATCAA+TGG - chr1_1:79527967-79527986 None:intergenic 30.0%
!!! AATTTGTTGTGTGCTTTTAC+AGG + chr1_1:79528088-79528107 Msa0047000:intron 30.0%
!! TAAAATTTGTTGCACGTGTT+TGG - chr1_1:79528217-79528236 None:intergenic 30.0%
!!! TTCTTCTTCATTTTGACTGT+AGG + chr1_1:79528498-79528517 Msa0047000:intron 30.0%
AACTATGCTTAAGATCCTAA+AGG - chr1_1:79528728-79528747 None:intergenic 30.0%
! ATAGTTTGTAGGCATTAACT+TGG + chr1_1:79528742-79528761 Msa0047000:intron 30.0%
AATTCTCCTTGTCTTGAAAT+AGG - chr1_1:79528801-79528820 None:intergenic 30.0%
ATTAGAATTAAGAACAGTCC+AGG - chr1_1:79528928-79528947 None:intergenic 30.0%
GACTGTTCTTAATTCTAATG+TGG + chr1_1:79528929-79528948 Msa0047000:intron 30.0%
TCTTAATTCTAATGTGGAAC+TGG + chr1_1:79528935-79528954 Msa0047000:intron 30.0%
CTTGCTAAAATCACTATATG+CGG - chr1_1:79529096-79529115 None:intergenic 30.0%
AACTATGTGTATCATCCAAT+AGG - chr1_1:79529191-79529210 None:intergenic 30.0%
! GATGATACACATAGTTTGTA+GGG + chr1_1:79529195-79529214 Msa0047000:intron 30.0%
! ATGATACACATAGTTTGTAG+GGG + chr1_1:79529196-79529215 Msa0047000:intron 30.0%
!! TTAATTTGGCTTTGCAAGTT+AGG + chr1_1:79529221-79529240 Msa0047000:intron 30.0%
! CACGTATTTTCTAGATAGTA+TGG + chr1_1:79529319-79529338 Msa0047000:intron 30.0%
!! AGTAATTATAGGGAGTACTT+TGG - chr1_1:79529345-79529364 None:intergenic 30.0%
!! TTCCATTCTCAATTTTAACG+TGG + chr1_1:79529413-79529432 Msa0047000:intron 30.0%
ATCCACGTTAAAATTGAGAA+TGG - chr1_1:79529418-79529437 None:intergenic 30.0%
GGAATAGAAAGTTGTAAGAT+CGG - chr1_1:79529673-79529692 None:intergenic 30.0%
CACTGTTCTTTAACAATGAT+AGG - chr1_1:79530247-79530266 None:intergenic 30.0%
TTGTCTTGATTCACAGATAT+TGG + chr1_1:79530454-79530473 Msa0047000:CDS 30.0%
!!! GTTGCTGTTTTGAAATCAAT+GGG + chr1_1:79530845-79530864 Msa0047000:CDS 30.0%
!! TCATTCTGAAATATCCAATG+AGG + chr1_1:79531006-79531025 Msa0047000:CDS 30.0%
TGAAGCTAATGCAAAGTTTA+TGG + chr1_1:79531151-79531170 Msa0047000:intron 30.0%
AAGGTATATCGCTCTTTAAT+AGG + chr1_1:79531178-79531197 Msa0047000:CDS 30.0%
TTTAATAGGAAGCCAAAGAA+AGG + chr1_1:79531192-79531211 Msa0047000:CDS 30.0%
AGAAACTCAATTCCTTTCTT+TGG - chr1_1:79531207-79531226 None:intergenic 30.0%
! CTTTTCTTAAAGATGCATCT+GGG + chr1_1:79531271-79531290 Msa0047000:CDS 30.0%
AAAGTCAAAAGAATCCACAT+AGG - chr1_1:79531364-79531383 None:intergenic 30.0%
!!! TGGATTCTTTTGACTTTCAA+GGG + chr1_1:79531367-79531386 Msa0047000:CDS 30.0%
ACAATATCACAGAATAAGCA+AGG - chr1_1:79531542-79531561 None:intergenic 30.0%
! TGTGATGTGTTAGTTTCATT+TGG + chr1_1:79531648-79531667 Msa0047000:intron 30.0%
GATTTCATAAAAAACAACCG+TGG + chr1_1:79531699-79531718 Msa0047000:CDS 30.0%
CAAAATGAAAGATGTTGATC+TGG + chr1_1:79531794-79531813 Msa0047000:CDS 30.0%
! ATATTATCATCGGAAAGTAC+TGG - chr1_1:79531992-79532011 None:intergenic 30.0%
ATGTAACATGAATAGCATAG+CGG - chr1_1:79532504-79532523 None:intergenic 30.0%
! TTTTTCTGCTTAATATCAGC+AGG - chr1_1:79532598-79532617 None:intergenic 30.0%
GAAAAATGTAGATGCAATCA+AGG + chr1_1:79532612-79532631 Msa0047000:CDS 30.0%
TAGTGAAGAAATTACTTGCA+AGG - chr1_1:79533177-79533196 None:intergenic 30.0%
TTGAACTCAAATAGAAAGGA+TGG - chr1_1:79533222-79533241 None:intergenic 30.0%
TAATTGTCATGTGTAGGAAT+AGG + chr1_1:79533347-79533366 Msa0047000:intron 30.0%
! AAGCCAATTTTAAACTCTTG+TGG + chr1_1:79533390-79533409 Msa0047000:intron 30.0%
! CAACCACAAGAGTTTAAAAT+TGG - chr1_1:79533396-79533415 None:intergenic 30.0%
! ATTTTAAACTCTTGTGGTTG+TGG + chr1_1:79533396-79533415 Msa0047000:intron 30.0%
TTTCCTTCTGAATTGTTGAT+AGG + chr1_1:79533433-79533452 Msa0047000:intron 30.0%
!!! ACTTTTTCAGAATCATTCTG+AGG - chr1_1:79533596-79533615 None:intergenic 30.0%
TTGAATATGTTGGAACAAGT+TGG + chr1_1:79533782-79533801 Msa0047000:CDS 30.0%
AGCCTTAACAAAGTCTATTA+TGG - chr1_1:79533861-79533880 None:intergenic 30.0%
! TTTTTGTGTCTCAGTGTTTA+TGG + chr1_1:79534027-79534046 Msa0047000:intron 30.0%
! TTTTGTGTCTCAGTGTTTAT+GGG + chr1_1:79534028-79534047 Msa0047000:intron 30.0%
!!! ATTTTTGGAACCTTGATTTG+TGG + chr1_1:79534086-79534105 Msa0047000:intron 30.0%
AATAGATGGGGATTTAAAAG+AGG - chr1_1:79534138-79534157 None:intergenic 30.0%
! ATCTTATGATTTTGTGGTTC+AGG + chr1_1:79534369-79534388 Msa0047000:intron 30.0%
TGACACTAATATTCTGTAAC+AGG + chr1_1:79534445-79534464 Msa0047000:intron 30.0%
ACTATAATATGAACCGTATC+CGG + chr1_1:79534469-79534488 Msa0047000:CDS 30.0%
TCAGATTTCTTTGTTACCAT+TGG + chr1_1:79534522-79534541 Msa0047000:CDS 30.0%
! TTCGATTGCAATTTTTGCTA+TGG + chr1_1:79534560-79534579 Msa0047000:CDS 30.0%
TGTCAATGAAATTTCTTGAG+CGG + chr1_1:79534598-79534617 Msa0047000:CDS 30.0%
TCAACAATGTTAAATCAGGA+TGG + chr1_1:79534751-79534770 Msa0047000:CDS 30.0%
TTTCATTAACTCATTGCTTG+TGG + chr1_1:79534883-79534902 Msa0047000:intron 30.0%
ACAATTGACACAATCTGTAA+AGG - chr1_1:79535036-79535055 None:intergenic 30.0%
AATAAAGGAAAGGAAACTTC+TGG + chr1_1:79535170-79535189 Msa0047000:CDS 30.0%
!! CTATTTCTGGTTTCCTTTAT+TGG + chr1_1:79535274-79535293 Msa0047000:CDS 30.0%
AGTTTGTCTAGCTATGAATT+AGG + chr1_1:79535316-79535335 Msa0047000:intron 30.0%
GTTTGTCTAGCTATGAATTA+GGG + chr1_1:79535317-79535336 Msa0047000:intron 30.0%
TGAATTAGGGCAAAAATAGT+TGG + chr1_1:79535330-79535349 Msa0047000:intron 30.0%
!!! CTTTGGCGATGTTTTAAAAT+CGG + chr1_1:79535385-79535404 Msa0047000:intron 30.0%
ACATGAAGACTATCAGATTA+TGG + chr1_1:79535408-79535427 Msa0047000:intron 30.0%
TATGGTTTAAGTAGATCAAC+TGG + chr1_1:79535426-79535445 Msa0047000:intron 30.0%
TCAAATACTCTTTCCCATAA+CGG - chr1_1:79535854-79535873 None:intergenic 30.0%
TGACGAACATAATCGAAAAT+CGG - chr1_1:79535890-79535909 None:intergenic 30.0%
!! TGTTAACCCACTTTTAAAGA+AGG + chr1_1:79536051-79536070 Msa0047000:CDS 30.0%
GACGCTTTATAAAGCTTATA+AGG - chr1_1:79536087-79536106 None:intergenic 30.0%
!!! TGTTCAGCTTTTATTGATTC+AGG + chr1_1:79536408-79536427 Msa0047000:CDS 30.0%
AAATGTGATGCATATTTGGT+AGG - chr1_1:79536942-79536961 None:intergenic 30.0%
ATTACTAATAGTCTGAAGAG+TGG - chr1_1:79537182-79537201 None:intergenic 30.0%
GATATGCTTAGTTTATCAGT+TGG + chr1_1:79537307-79537326 Msa0047000:CDS 30.0%
TTCGGAGATTGAATATCCTT+CGG - chr1_1:79526545-79526564 None:intergenic 35.0%
TCTAGCGAGATTGATTGAAT+CGG + chr1_1:79526811-79526830 Msa0047000:CDS 35.0%
CAGTAACTTCAATTTCGCTT+CGG + chr1_1:79526900-79526919 Msa0047000:CDS 35.0%
! AGTGATTGTCTTTAGGAGAA+TGG + chr1_1:79527033-79527052 Msa0047000:CDS 35.0%
TAGTATGTATAAGACGGCTT+TGG + chr1_1:79527345-79527364 Msa0047000:CDS 35.0%
! GATGATTTGGAGATTCAGAT+TGG + chr1_1:79527418-79527437 Msa0047000:CDS 35.0%
! TTCAGATTGGTAATAAGCTG+AGG + chr1_1:79527431-79527450 Msa0047000:CDS 35.0%
!!! GGATGCTTTTTTGGTGTTTA+GGG + chr1_1:79527456-79527475 Msa0047000:CDS 35.0%
! CTGTTTTCAGAACTAGTGAA+AGG + chr1_1:79527596-79527615 Msa0047000:CDS 35.0%
! TTCGCTGTACCTTTATTTAG+GGG + chr1_1:79527673-79527692 Msa0047000:intron 35.0%
GAACTGAATCCCCTAAATAA+AGG - chr1_1:79527685-79527704 None:intergenic 35.0%
GCATCTTATATTAGTTAGGG+TGG + chr1_1:79527722-79527741 Msa0047000:intron 35.0%
GATATTTACGTTTCTTCGCA+TGG - chr1_1:79528003-79528022 None:intergenic 35.0%
! GTAAATATCTGAGAGAGCAT+GGG + chr1_1:79528014-79528033 Msa0047000:intron 35.0%
TTGCACGTGTTTGGATAATT+TGG - chr1_1:79528208-79528227 None:intergenic 35.0%
GATTAGAGATCTAGAGATCT+AGG - chr1_1:79528469-79528488 None:intergenic 35.0%
! AGAACAGAGATGAGATTTTG+TGG + chr1_1:79528532-79528551 Msa0047000:intron 35.0%
! GGATCTTAAGCATAGTTTGT+AGG + chr1_1:79528731-79528750 Msa0047000:intron 35.0%
! ATTAACTTGGCTATGCAAGT+TGG + chr1_1:79528755-79528774 Msa0047000:intron 35.0%
TTGAAATAGGAAAACCTTGC+TGG - chr1_1:79528788-79528807 None:intergenic 35.0%
! GGTTTTCCTATTTCAAGACA+AGG + chr1_1:79528792-79528811 Msa0047000:intron 35.0%
AGGATTAACGAAGCCATTTA+GGG - chr1_1:79528873-79528892 None:intergenic 35.0%
TTAACCCAAACTTAGCTCAA+GGG - chr1_1:79528899-79528918 None:intergenic 35.0%
! AGCTAAGTTTGGGTTAAGAT+AGG + chr1_1:79528902-79528921 Msa0047000:intron 35.0%
! GACTAGAATTTTTGACCTTG+AGG - chr1_1:79529017-79529036 None:intergenic 35.0%
AGGTCAAAAATTCTAGTCCT+AGG + chr1_1:79529019-79529038 Msa0047000:intron 35.0%
AAATTCTAGTCCTAGGATGA+AGG + chr1_1:79529026-79529045 Msa0047000:intron 35.0%
AATTCTAGTCCTAGGATGAA+GGG + chr1_1:79529027-79529046 Msa0047000:intron 35.0%
GATGTGCTAAAACCCTAAAT+TGG + chr1_1:79529050-79529069 Msa0047000:intron 35.0%
AATCACTATATGCGGTATGT+TGG - chr1_1:79529088-79529107 None:intergenic 35.0%
!! CGCATATAGTGATTTTAGCA+AGG + chr1_1:79529094-79529113 Msa0047000:intron 35.0%
!!! GTTTTGGTTTCCAATCCTAT+TGG + chr1_1:79529173-79529192 Msa0047000:intron 35.0%
TGTGTATCATCCAATAGGAT+TGG - chr1_1:79529186-79529205 None:intergenic 35.0%
! GGATGATACACATAGTTTGT+AGG + chr1_1:79529194-79529213 Msa0047000:intron 35.0%
AAATAGGAAAACCTTGCTAG+TGG - chr1_1:79529251-79529270 None:intergenic 35.0%
GATGTGTTTAAATCCCAAGT+TGG + chr1_1:79529521-79529540 Msa0047000:intron 35.0%
GCAATCAATATAGCCAACTT+GGG - chr1_1:79529537-79529556 None:intergenic 35.0%
TGCAATCAATATAGCCAACT+TGG - chr1_1:79529538-79529557 None:intergenic 35.0%
GAATGAACAAGGATGATGAT+TGG - chr1_1:79529585-79529604 None:intergenic 35.0%
GATGTGTTTAAATCCCAAGT+GGG + chr1_1:79529521-79529540 Msa0047000:intron 35.0%
CATATGCAATTCATGGATGT+TGG - chr1_1:79529971-79529990 None:intergenic 35.0%
!! TTTGCATTGACTGGTTAAAC+AGG + chr1_1:79530192-79530211 Msa0047000:intron 35.0%
!! TGACTGGTTAAACAGGTTTT+TGG + chr1_1:79530199-79530218 Msa0047000:intron 35.0%
!! GACTGGTTAAACAGGTTTTT+GGG + chr1_1:79530200-79530219 Msa0047000:intron 35.0%
! TGGTATCAAGATTTAGAGCT+GGG + chr1_1:79530318-79530337 Msa0047000:CDS 35.0%
! TTTTCCCAATGATTGTTCTC+AGG + chr1_1:79530363-79530382 Msa0047000:CDS 35.0%
TTTCCCAATGATTGTTCTCA+GGG + chr1_1:79530364-79530383 Msa0047000:CDS 35.0%
! CATATTTGAAAGGTGTGCTA+TGG + chr1_1:79530520-79530539 Msa0047000:intron 35.0%
! GGTTTTTACACTATTCATGC+CGG + chr1_1:79530633-79530652 Msa0047000:intron 35.0%
! TCATTATGTTCCTTCTAGGA+TGG + chr1_1:79530718-79530737 Msa0047000:intron 35.0%
ACTTGAAGCCATGAAATGTT+TGG + chr1_1:79530823-79530842 Msa0047000:CDS 35.0%
AACAGCAACCAAACATTTCA+TGG - chr1_1:79530834-79530853 None:intergenic 35.0%
!!! GGTTGCTGTTTTGAAATCAA+TGG + chr1_1:79530844-79530863 Msa0047000:CDS 35.0%
!!! TTTTGAAATCAATGGGAGAC+TGG + chr1_1:79530852-79530871 Msa0047000:CDS 35.0%
! TCAATTTTCTTGCCTGAATG+AGG - chr1_1:79530905-79530924 None:intergenic 35.0%
TTTCTAATATTGAGCAACGC+CGG + chr1_1:79531038-79531057 Msa0047000:CDS 35.0%
AGAAAAGCAGCAATATCTTC+CGG - chr1_1:79531258-79531277 None:intergenic 35.0%
! GCTTTTCTTAAAGATGCATC+TGG + chr1_1:79531270-79531289 Msa0047000:CDS 35.0%
! ACCTTGATTGGTGATTATCT+TGG + chr1_1:79531303-79531322 Msa0047000:CDS 35.0%
TCCAAGATAATCACCAATCA+AGG - chr1_1:79531307-79531326 None:intergenic 35.0%
! TTGGTGATTATCTTGGAGAA+AGG + chr1_1:79531310-79531329 Msa0047000:CDS 35.0%
TGGTGATTATCTTGGAGAAA+GGG + chr1_1:79531311-79531330 Msa0047000:CDS 35.0%
ATAGGCATGCATTACTTTCA+AGG - chr1_1:79531346-79531365 None:intergenic 35.0%
!!! GTGGATTCTTTTGACTTTCA+AGG + chr1_1:79531366-79531385 Msa0047000:CDS 35.0%
!!! TTCTTTTGACTTTCAAGGGA+TGG + chr1_1:79531371-79531390 Msa0047000:CDS 35.0%
! TCAGCACTAGAAAAGACTTT+TGG - chr1_1:79531507-79531526 None:intergenic 35.0%
CAATCCTATGGTGAAGAATA+AGG + chr1_1:79531578-79531597 Msa0047000:CDS 35.0%
TGATGGAAAAGATATACCAG+AGG + chr1_1:79531728-79531747 Msa0047000:CDS 35.0%
ATATACCAGAGGAATACTTG+AGG + chr1_1:79531739-79531758 Msa0047000:CDS 35.0%
TGAATTCTTCTTGCATACGA+CGG - chr1_1:79531938-79531957 None:intergenic 35.0%
TTTACGTTCAAGCCTGTTAT+CGG + chr1_1:79532093-79532112 Msa0047000:intron 35.0%
TAAGTACTCGTAAAAGTGGT+AGG - chr1_1:79532120-79532139 None:intergenic 35.0%
CATGTAAGTACTCGTAAAAG+TGG - chr1_1:79532124-79532143 None:intergenic 35.0%
ACATAAAAAGAAGACCACTG+TGG - chr1_1:79532187-79532206 None:intergenic 35.0%
AATCCTTAGATTCATGATCG+AGG + chr1_1:79532390-79532409 Msa0047000:CDS 35.0%
TGATGTCAATGAAGACACAT+CGG + chr1_1:79532527-79532546 Msa0047000:CDS 35.0%
AATGTAGATGCAATCAAGGT+TGG + chr1_1:79532616-79532635 Msa0047000:intron 35.0%
TATTTATTCCTTGCAGCTTG+TGG + chr1_1:79532647-79532666 Msa0047000:intron 35.0%
ACTATACCACAGTGATGAAA+GGG - chr1_1:79532761-79532780 None:intergenic 35.0%
AACTATACCACAGTGATGAA+AGG - chr1_1:79532762-79532781 None:intergenic 35.0%
ACCATGCTTACGCTATTAAA+GGG - chr1_1:79533045-79533064 None:intergenic 35.0%
ATAGAAGTAGCGACTAGTAA+TGG + chr1_1:79533104-79533123 Msa0047000:intron 35.0%
TAGAAGTAGCGACTAGTAAT+GGG + chr1_1:79533105-79533124 Msa0047000:intron 35.0%
!! CAAGGAATTCAGCTTTAGAT+GGG - chr1_1:79533159-79533178 None:intergenic 35.0%
GATAGTTACTATTGCTGATG+AGG + chr1_1:79533457-79533476 Msa0047000:CDS 35.0%
TTACTATTGCTGATGAGGAT+GGG + chr1_1:79533462-79533481 Msa0047000:CDS 35.0%
GAATTACCTACAAGAAGCTT+GGG + chr1_1:79533484-79533503 Msa0047000:CDS 35.0%
AAGATGTAGATGCTCAAATC+GGG - chr1_1:79533531-79533550 None:intergenic 35.0%
GAAGATGTAGATGCTCAAAT+CGG - chr1_1:79533532-79533551 None:intergenic 35.0%
TTTGAGCATCTACATCTTCT+CGG + chr1_1:79533533-79533552 Msa0047000:CDS 35.0%
!! TTTTGAAGAAGAAAGGACCT+GGG + chr1_1:79533645-79533664 Msa0047000:CDS 35.0%
! TCATATGATAGTGCTGGAAT+CGG + chr1_1:79533704-79533723 Msa0047000:CDS 35.0%
GAGTCAAAAGTTGAATAGTG+AGG + chr1_1:79533835-79533854 Msa0047000:CDS 35.0%
GGCCATAATAGACTTTGTTA+AGG + chr1_1:79533856-79533875 Msa0047000:CDS 35.0%
! CTTTGTTAAGGCTTTATGCA+AGG + chr1_1:79533868-79533887 Msa0047000:CDS 35.0%
TTTCAGCCTTACAAAGATAG+TGG + chr1_1:79533931-79533950 Msa0047000:CDS 35.0%
CAATCTCCACTATCTTTGTA+AGG - chr1_1:79533940-79533959 None:intergenic 35.0%
AGTAGCATGCATTAACTAGT+AGG - chr1_1:79533979-79533998 None:intergenic 35.0%
AATAAAGTTCAGAGAGAGCA+GGG - chr1_1:79534003-79534022 None:intergenic 35.0%
!!! CATGTGATGAGACCTTTTTT+TGG + chr1_1:79534230-79534249 Msa0047000:intron 35.0%
! TTTGTTACCATTGGTTGTTC+AGG + chr1_1:79534531-79534550 Msa0047000:CDS 35.0%
AAGATTTCCTGAACAACCAA+TGG - chr1_1:79534541-79534560 None:intergenic 35.0%
GTCAATGAAATTTCTTGAGC+GGG + chr1_1:79534599-79534618 Msa0047000:CDS 35.0%
TATCAGATGTGTCTCTCAAA+TGG + chr1_1:79534716-79534735 Msa0047000:CDS 35.0%
CGTGTCAACAATGTTAAATC+AGG + chr1_1:79534747-79534766 Msa0047000:CDS 35.0%
ACAACATCATCTGTGAGAAT+TGG - chr1_1:79534828-79534847 None:intergenic 35.0%
ATGTTGTTGTCGAGTTTATC+TGG + chr1_1:79534841-79534860 Msa0047000:intron 35.0%
!! CCAAGAGTACAATGTTTTTG+TGG - chr1_1:79534947-79534966 None:intergenic 35.0%
CCACAAAAACATTGTACTCT+TGG + chr1_1:79534944-79534963 Msa0047000:CDS 35.0%
ATTGACACAATCTGTAAAGG+TGG - chr1_1:79535033-79535052 None:intergenic 35.0%
TTCGTCAAGGAATAAAGGAA+AGG + chr1_1:79535160-79535179 Msa0047000:CDS 35.0%
TGTATTAGCTAGTTCAACTG+CGG - chr1_1:79535457-79535476 None:intergenic 35.0%
ATTAGATTGTGATTCCACTG+AGG + chr1_1:79535569-79535588 Msa0047000:intron 35.0%
! AGTGATTATCTCTTTTGTGC+AGG + chr1_1:79535728-79535747 Msa0047000:intron 35.0%
CATAATCGAAAATCGGGAAT+AGG - chr1_1:79535883-79535902 None:intergenic 35.0%
GACGAACATAATCGAAAATC+GGG - chr1_1:79535889-79535908 None:intergenic 35.0%
AAGATCTACAACCAATTGGA+GGG - chr1_1:79536011-79536030 None:intergenic 35.0%
AAAGATCTACAACCAATTGG+AGG - chr1_1:79536012-79536031 None:intergenic 35.0%
! TCAGCACCTTCTTTAAAAGT+GGG - chr1_1:79536060-79536079 None:intergenic 35.0%
! ATCAGCACCTTCTTTAAAAG+TGG - chr1_1:79536061-79536080 None:intergenic 35.0%
TTCGTTTGATGAGTAATGCT+GGG + chr1_1:79536146-79536165 Msa0047000:CDS 35.0%
!!! GATACTCTTTTTTGGTATGG+AGG - chr1_1:79536453-79536472 None:intergenic 35.0%
TAACTCTCACTGAAATTGAC+AGG + chr1_1:79536721-79536740 Msa0047000:intron 35.0%
! CTTTTGCTGAAAGTTGAGTT+CGG - chr1_1:79536772-79536791 None:intergenic 35.0%
GCTCAAAGTTACAAGAGTTT+GGG + chr1_1:79536867-79536886 Msa0047000:CDS 35.0%
! ATTTTTACAGAACCTCGTTG+TGG + chr1_1:79536958-79536977 Msa0047000:CDS 35.0%
!! GGGTTTTATATTGAAGTAGC+AGG + chr1_1:79537049-79537068 Msa0047000:CDS 35.0%
! CAACATTGGTTAATTCCTCT+AGG + chr1_1:79537109-79537128 Msa0047000:CDS 35.0%
TTATCAAGCTTGAGAGAAGA+GGG - chr1_1:79537246-79537265 None:intergenic 35.0%
AGCTTGATAAGTTGTGAACA+TGG + chr1_1:79537256-79537275 Msa0047000:CDS 35.0%
AAATCCTCAAAAACGCTTCC+TGG + chr1_1:79526462-79526481 Msa0047000:CDS 40.0%
AATATCCTTCGGTGAAGTGA+GGG - chr1_1:79526534-79526553 None:intergenic 40.0%
ATACAGAAGCTGATTGCTGT+AGG + chr1_1:79526737-79526756 Msa0047000:CDS 40.0%
!! TGATGATGCTATGGAGCTTT+TGG + chr1_1:79526856-79526875 Msa0047000:CDS 40.0%
TCAATTTCGCTTCGGATTCA+CGG + chr1_1:79526908-79526927 Msa0047000:CDS 40.0%
GAATGTGGTGAATCAAACGA+CGG + chr1_1:79526985-79527004 Msa0047000:CDS 40.0%
! GATTGTCTTTAGGAGAATGG+AGG + chr1_1:79527036-79527055 Msa0047000:CDS 40.0%
TCAACATCAGATTTCTCCAC+TGG - chr1_1:79527115-79527134 None:intergenic 40.0%
TCTATGACAGTGTTTGTGCA+AGG + chr1_1:79527139-79527158 Msa0047000:CDS 40.0%
TTCGACGGATAAGGATATGT+TGG + chr1_1:79527303-79527322 Msa0047000:CDS 40.0%
!! ATGTATAAGACGGCTTTGGA+AGG + chr1_1:79527349-79527368 Msa0047000:CDS 40.0%
!! TGTATAAGACGGCTTTGGAA+GGG + chr1_1:79527350-79527369 Msa0047000:CDS 40.0%
! AGATTGGTAATAAGCTGAGG+AGG + chr1_1:79527434-79527453 Msa0047000:CDS 40.0%
! GATTGGTAATAAGCTGAGGA+GGG + chr1_1:79527435-79527454 Msa0047000:CDS 40.0%
!!! GGGATGCTTTTTTGGTGTTT+AGG + chr1_1:79527455-79527474 Msa0047000:CDS 40.0%
GATGTGTCTTGGTTTAGTTG+CGG + chr1_1:79527748-79527767 Msa0047000:intron 40.0%
ACCAAGCGAACAGCTAAATA+AGG + chr1_1:79527906-79527925 Msa0047000:intron 40.0%
! TCCTTATTTAGCTGTTCGCT+TGG - chr1_1:79527910-79527929 None:intergenic 40.0%
ATATGGGAAACAAAGCTGAC+TGG + chr1_1:79527972-79527991 Msa0047000:intron 40.0%
TTACGTTTCTTCGCATGGAA+AGG - chr1_1:79527998-79528017 None:intergenic 40.0%
CGTAAATATCTGAGAGAGCA+TGG + chr1_1:79528013-79528032 Msa0047000:intron 40.0%
GAGAATGAATACCAGTGGAT+GGG + chr1_1:79528036-79528055 Msa0047000:intron 40.0%
TAGCACCATAGTTGTCAAAG+CGG + chr1_1:79528279-79528298 Msa0047000:intron 40.0%
! GTTTTCCGCTTTGACAACTA+TGG - chr1_1:79528287-79528306 None:intergenic 40.0%
CTAGTCTCTGTTGTCAATAG+CGG - chr1_1:79528683-79528702 None:intergenic 40.0%
! CAGAGACTAGCACTAAGTTT+TGG + chr1_1:79528693-79528712 Msa0047000:intron 40.0%
AAATAGGAAAACCTTGCTGG+TGG - chr1_1:79528785-79528804 None:intergenic 40.0%
TTGACCCAATACTCCCTAAA+TGG + chr1_1:79528857-79528876 Msa0047000:intron 40.0%
!! GAAGCCATTTAGGGAGTATT+GGG - chr1_1:79528864-79528883 None:intergenic 40.0%
GAGGATTAACGAAGCCATTT+AGG - chr1_1:79528874-79528893 None:intergenic 40.0%
TCTTCCCTTGAGCTAAGTTT+GGG + chr1_1:79528892-79528911 Msa0047000:intron 40.0%
CTTAACCCAAACTTAGCTCA+AGG - chr1_1:79528900-79528919 None:intergenic 40.0%
ATTCTAGTCCTAGGATGAAG+GGG + chr1_1:79529028-79529047 Msa0047000:intron 40.0%
TCGTCTATCTCGCCAATTTA+GGG - chr1_1:79529065-79529084 None:intergenic 40.0%
!! AGTTTGTAGGGGCGTTAATT+TGG + chr1_1:79529207-79529226 Msa0047000:intron 40.0%
GTGTACGTCAATATCTGATG+TGG - chr1_1:79529452-79529471 None:intergenic 40.0%
TCAGATATTGACGTACACCA+CGG + chr1_1:79529454-79529473 Msa0047000:intron 40.0%
!! TAGTGCTACTTATAGTGCCT+TGG + chr1_1:79529559-79529578 Msa0047000:intron 40.0%
CTTTCTATTCCTTGCATGAG+CGG + chr1_1:79529682-79529701 Msa0047000:intron 40.0%
TTTCTATTCCTTGCATGAGC+GGG + chr1_1:79529683-79529702 Msa0047000:intron 40.0%
ATCTAACTTGAGACCTTGAG+AGG + chr1_1:79529767-79529786 Msa0047000:intron 40.0%
TTTAAACACATCCCGCTCAT+GGG - chr1_1:79529808-79529827 None:intergenic 40.0%
ATTTAAACACATCCCGCTCA+TGG - chr1_1:79529809-79529828 None:intergenic 40.0%
GGATGTGTTTAAATCCCAAG+TGG + chr1_1:79529520-79529539 Msa0047000:intron 40.0%
CAATTCATGGATGTTGGTGT+GGG - chr1_1:79529965-79529984 None:intergenic 40.0%
! ACACTGATGTTTGCATTGAC+TGG + chr1_1:79530183-79530202 Msa0047000:intron 40.0%
! TAGGCATAAGTACTGCTTGA+TGG - chr1_1:79530228-79530247 None:intergenic 40.0%
ATGCTCTATCTTCATCAGTC+TGG + chr1_1:79530298-79530317 Msa0047000:CDS 40.0%
! CTGGTATCAAGATTTAGAGC+TGG + chr1_1:79530317-79530336 Msa0047000:CDS 40.0%
GAACCCTGAGAACAATCATT+GGG - chr1_1:79530370-79530389 None:intergenic 40.0%
AGAACCCTGAGAACAATCAT+TGG - chr1_1:79530371-79530390 None:intergenic 40.0%
! TTACACTATTCATGCCGGTT+CGG + chr1_1:79530638-79530657 Msa0047000:intron 40.0%
!! GTTCCTTCTAGGATGGTAAA+TGG + chr1_1:79530725-79530744 Msa0047000:intron 40.0%
AGTCCATTTACCATCCTAGA+AGG - chr1_1:79530731-79530750 None:intergenic 40.0%
AAAACTGTGGTTGTTACACC+AGG - chr1_1:79530779-79530798 None:intergenic 40.0%
!!! AGTTTTAGAGTTGCCTCTTG+AGG - chr1_1:79530806-79530825 None:intergenic 40.0%
TTTCTTGCCTGAATGAGGAT+CGG - chr1_1:79530900-79530919 None:intergenic 40.0%
TTTCCCATGGCAAATGGTAA+TGG + chr1_1:79530956-79530975 Msa0047000:CDS 40.0%
TCTCCATTACCATTTGCCAT+GGG - chr1_1:79530962-79530981 None:intergenic 40.0%
TTCTCCATTACCATTTGCCA+TGG - chr1_1:79530963-79530982 None:intergenic 40.0%
GAGTATCTGATCCTTCAACT+GGG - chr1_1:79530988-79531007 None:intergenic 40.0%
TGAGTATCTGATCCTTCAAC+TGG - chr1_1:79530989-79531008 None:intergenic 40.0%
TTCTAATATTGAGCAACGCC+GGG + chr1_1:79531039-79531058 Msa0047000:CDS 40.0%
!! GAAGTTCTAGCTTATAAGCC+CGG - chr1_1:79531060-79531079 None:intergenic 40.0%
GGCTTATAAGCTAGAACTTC+AGG + chr1_1:79531060-79531079 Msa0047000:CDS 40.0%
GCTAATGCAAAGTTTATGGC+AGG + chr1_1:79531155-79531174 Msa0047000:intron 40.0%
ATGCAAAGTTTATGGCAGGA+AGG + chr1_1:79531159-79531178 Msa0047000:intron 40.0%
GAAAGTAATGCATGCCTATG+TGG + chr1_1:79531347-79531366 Msa0047000:CDS 40.0%
GCAATCAGGATGTTTCTTCA+AGG + chr1_1:79531405-79531424 Msa0047000:CDS 40.0%
!!! TCAATTTTTTGTGCCTCACC+AGG - chr1_1:79531441-79531460 None:intergenic 40.0%
CACACCTTATTCTTCACCAT+AGG - chr1_1:79531585-79531604 None:intergenic 40.0%
! CTTTTCCATCATCTATGCCA+CGG - chr1_1:79531719-79531738 None:intergenic 40.0%
AAAGACCTCAAGTATTCCTC+TGG - chr1_1:79531747-79531766 None:intergenic 40.0%
TTCCAAATACGTGATCTGAG+TGG - chr1_1:79532231-79532250 None:intergenic 40.0%
TTATGCATGCTGTATGAGAG+AGG - chr1_1:79532315-79532334 None:intergenic 40.0%
ACACCTCGATCATGAATCTA+AGG - chr1_1:79532396-79532415 None:intergenic 40.0%
ATTCATGATCGAGGTGTGTT+GGG + chr1_1:79532399-79532418 Msa0047000:CDS 40.0%
ACGCTAAAAGCAGCTAACAT+TGG - chr1_1:79532427-79532446 None:intergenic 40.0%
! GTAATAGCTCTGTGTCTTGA+AGG + chr1_1:79532475-79532494 Msa0047000:CDS 40.0%
GATGTCAATGAAGACACATC+GGG + chr1_1:79532528-79532547 Msa0047000:CDS 40.0%
AATATCAGCAGGAGAATGCA+GGG - chr1_1:79532587-79532606 None:intergenic 40.0%
TAATATCAGCAGGAGAATGC+AGG - chr1_1:79532588-79532607 None:intergenic 40.0%
!! TTTTGCTATCCTGACAGTGT+TGG + chr1_1:79532720-79532739 Msa0047000:intron 40.0%
!!! TTTTGCTCTGCTTCAAGTTG+AGG + chr1_1:79532985-79533004 Msa0047000:intron 40.0%
CCATGCTTACGCTATTAAAG+GGG - chr1_1:79533044-79533063 None:intergenic 40.0%
CACCATGCTTACGCTATTAA+AGG - chr1_1:79533046-79533065 None:intergenic 40.0%
TCGCTACTTCTATTGTGCTT+TGG - chr1_1:79533097-79533116 None:intergenic 40.0%
!! GCAAGGAATTCAGCTTTAGA+TGG - chr1_1:79533160-79533179 None:intergenic 40.0%
ACACAGCGTTGTGAAATCAA+TGG + chr1_1:79533247-79533266 Msa0047000:intron 40.0%
! TGTGGTTGTGGATTTGACTT+TGG + chr1_1:79533408-79533427 Msa0047000:intron 40.0%
TCGCCTATCAACAATTCAGA+AGG - chr1_1:79533439-79533458 None:intergenic 40.0%
GTTACTATTGCTGATGAGGA+TGG + chr1_1:79533461-79533480 Msa0047000:CDS 40.0%
GGAATTACCTACAAGAAGCT+TGG + chr1_1:79533483-79533502 Msa0047000:CDS 40.0%
AAAGCAAAGAATGTGGCATC+TGG - chr1_1:79533572-79533591 None:intergenic 40.0%
CTGAGGAAAAGCAAAGAATG+TGG - chr1_1:79533579-79533598 None:intergenic 40.0%
!!! CTTCCGGTTTTGAAGAAGAA+AGG + chr1_1:79533638-79533657 Msa0047000:CDS 40.0%
GGTCCTTTCTTCTTCAAAAC+CGG - chr1_1:79533644-79533663 None:intergenic 40.0%
!!! GTTTTGAAGAAGAAAGGACC+TGG + chr1_1:79533644-79533663 Msa0047000:CDS 40.0%
ATATGAACCACGCATCAATG+TGG - chr1_1:79533690-79533709 None:intergenic 40.0%
GAATAAAGTTCAGAGAGAGC+AGG - chr1_1:79534004-79534023 None:intergenic 40.0%
TGTCTCAGTGTTTATGGGTT+GGG + chr1_1:79534033-79534052 Msa0047000:intron 40.0%
GCAATCAAAGCCACAAATCA+AGG - chr1_1:79534099-79534118 None:intergenic 40.0%
CACCAAAGATGAAGTTGAGA+AGG + chr1_1:79534305-79534324 Msa0047000:intron 40.0%
CACCTTCTCAACTTCATCTT+TGG - chr1_1:79534310-79534329 None:intergenic 40.0%
TTTCATTGACAACTGACGCA+AGG - chr1_1:79534589-79534608 None:intergenic 40.0%
TTGCTTGTGGACTTGATATC+AGG + chr1_1:79534896-79534915 Msa0047000:intron 40.0%
GTTTCAGTCTCAGTGATGTA+TGG - chr1_1:79535008-79535027 None:intergenic 40.0%
ACAGAATCGAAGGAAAGTGA+TGG - chr1_1:79535108-79535127 None:intergenic 40.0%
!! GTTTTGTTGCACAGAATCGA+AGG - chr1_1:79535118-79535137 None:intergenic 40.0%
TGTGCAACAAAACTAGCTGA+AGG + chr1_1:79535125-79535144 Msa0047000:CDS 40.0%
TTCACCTAGAACTGGAAAAG+AGG + chr1_1:79535208-79535227 Msa0047000:CDS 40.0%
TCACCTAGAACTGGAAAAGA+GGG + chr1_1:79535209-79535228 Msa0047000:CDS 40.0%
AAAGAGGGGAGACAAGATAA+TGG + chr1_1:79535224-79535243 Msa0047000:CDS 40.0%
!! ACAAGATAATGGAGAGGTGA+TGG + chr1_1:79535235-79535254 Msa0047000:CDS 40.0%
AGGACGATCATCTCTATTTC+TGG + chr1_1:79535261-79535280 Msa0047000:CDS 40.0%
!! TTCTGGTTTCCTTTATTGGC+TGG + chr1_1:79535278-79535297 Msa0047000:CDS 40.0%
! GTTTCCTTTATTGGCTGGTA+AGG + chr1_1:79535283-79535302 Msa0047000:intron 40.0%
AAGTCCTTACCAGCCAATAA+AGG - chr1_1:79535290-79535309 None:intergenic 40.0%
CTGTTCAACCAATTCAACCT+CGG + chr1_1:79535542-79535561 Msa0047000:intron 40.0%
TAATCGAACCGAGGTTGAAT+TGG - chr1_1:79535553-79535572 None:intergenic 40.0%
ATCACAATCTAATCGAACCG+AGG - chr1_1:79535562-79535581 None:intergenic 40.0%
GAACTAGCCAATTCACTGAT+GGG - chr1_1:79535600-79535619 None:intergenic 40.0%
TCTTAAAAACCTGACCGAAC+CGG - chr1_1:79535645-79535664 None:intergenic 40.0%
! CTAGTTGTAAGAAGCATAGC+TGG + chr1_1:79535691-79535710 Msa0047000:intron 40.0%
GGTTGCGTAAGGTTTCAAAT+AGG - chr1_1:79535811-79535830 None:intergenic 40.0%
! TTTGAAACCTTACGCAACCA+TGG + chr1_1:79535812-79535831 Msa0047000:CDS 40.0%
GTCATGCTATTGATCCTTCA+GGG + chr1_1:79535906-79535925 Msa0047000:CDS 40.0%
GTTCGTTTGATGAGTAATGC+TGG + chr1_1:79536145-79536164 Msa0047000:CDS 40.0%
TCGTTTGATGAGTAATGCTG+GGG + chr1_1:79536147-79536166 Msa0047000:CDS 40.0%
CACTTCTAACCACTTCTCAT+CGG - chr1_1:79536182-79536201 None:intergenic 40.0%
!! AGAAGTGGTCTTGTCACTAA+AGG + chr1_1:79536195-79536214 Msa0047000:CDS 40.0%
ACCATCGAGGAATGAAAAGT+CGG - chr1_1:79536242-79536261 None:intergenic 40.0%
CATTACGCATAGCATCAAAG+AGG - chr1_1:79536805-79536824 None:intergenic 40.0%
CTTTGATGCTATGCGTAATG+TGG + chr1_1:79536805-79536824 Msa0047000:CDS 40.0%
CGCTCAAAGTTACAAGAGTT+TGG + chr1_1:79536866-79536885 Msa0047000:CDS 40.0%
TCATTCTCAAGTCGTAACAG+TGG - chr1_1:79536917-79536936 None:intergenic 40.0%
! TCATCTAGTTCAGCTTTGTC+AGG + chr1_1:79537018-79537037 Msa0047000:CDS 40.0%
TATATTGAAGTAGCAGGCTC+TGG + chr1_1:79537055-79537074 Msa0047000:CDS 40.0%
CAAGTGTCTGAATCTTCTCA+TGG + chr1_1:79537079-79537098 Msa0047000:CDS 40.0%
CTTATCAAGCTTGAGAGAAG+AGG - chr1_1:79537247-79537266 None:intergenic 40.0%
TTGTGAACATGGATCAACAG+AGG + chr1_1:79537267-79537286 Msa0047000:CDS 40.0%
! CAGTTGGTCCTCTTTTACTA+CGG + chr1_1:79537323-79537342 Msa0047000:CDS 40.0%
CAACATGACCGTAGTAAAAG+AGG - chr1_1:79537334-79537353 None:intergenic 40.0%
! TGAGGATTTTCTCGAGAGCA+GGG - chr1_1:79526451-79526470 None:intergenic 45.0%
! TTGAGGATTTTCTCGAGAGC+AGG - chr1_1:79526452-79526471 None:intergenic 45.0%
TGAAGTGAGGGTTTCAGTGA+CGG - chr1_1:79526522-79526541 None:intergenic 45.0%
GAATATCCTTCGGTGAAGTG+AGG - chr1_1:79526535-79526554 None:intergenic 45.0%
TCTATCTCCTCTCATCAACG+CGG + chr1_1:79526670-79526689 Msa0047000:CDS 45.0%
CTCGCTAGAAACTTCGATTC+AGG - chr1_1:79526800-79526819 None:intergenic 45.0%
GTGTGTAAATGTCACGACCT+AGG + chr1_1:79526833-79526852 Msa0047000:CDS 45.0%
! TGTCTTTAGGAGAATGGAGG+CGG + chr1_1:79527039-79527058 Msa0047000:CDS 45.0%
ATCAATTCCGCCACGACAAT+CGG - chr1_1:79527088-79527107 None:intergenic 45.0%
! GATGGAGTTTTGCATCCATC+AGG + chr1_1:79527190-79527209 Msa0047000:CDS 45.0%
GACAGTTGAGACTACGAATC+CGG + chr1_1:79527267-79527286 Msa0047000:CDS 45.0%
TTTGCTGGATTCGACGGATA+AGG + chr1_1:79527294-79527313 Msa0047000:CDS 45.0%
CATGGGAGAATGAATACCAG+TGG + chr1_1:79528031-79528050 Msa0047000:intron 45.0%
GGAGAATGAATACCAGTGGA+TGG + chr1_1:79528035-79528054 Msa0047000:intron 45.0%
AATACCAGTGGATGGGTAGA+GGG + chr1_1:79528043-79528062 Msa0047000:intron 45.0%
AGCGGAAAACCAAATTGACG+CGG + chr1_1:79528297-79528316 Msa0047000:intron 45.0%
AACCAAATTGACGCGGTAAG+CGG + chr1_1:79528304-79528323 Msa0047000:intron 45.0%
TAGGCAAAAGCGGAACAAAG+CGG - chr1_1:79528603-79528622 None:intergenic 45.0%
CAATAGCGGTCTAACGATAG+CGG - chr1_1:79528669-79528688 None:intergenic 45.0%
! CGAAGCCATTTAGGGAGTAT+TGG - chr1_1:79528865-79528884 None:intergenic 45.0%
CAAACTTAGCTCAAGGGAAG+AGG - chr1_1:79528893-79528912 None:intergenic 45.0%
CTCTTCCCTTGAGCTAAGTT+TGG + chr1_1:79528891-79528910 Msa0047000:intron 45.0%
! AGTTTGGGTTAAGATAGGCC+TGG + chr1_1:79528907-79528926 Msa0047000:intron 45.0%
TGGACAATAGCATGTGAGGT+AGG - chr1_1:79528984-79529003 None:intergenic 45.0%
GATGTGGACAATAGCATGTG+AGG - chr1_1:79528988-79529007 None:intergenic 45.0%
GTCCACATCTTACAACCTCA+AGG + chr1_1:79528999-79529018 Msa0047000:intron 45.0%
GACCTTGAGGTTGTAAGATG+TGG - chr1_1:79529004-79529023 None:intergenic 45.0%
GTCGTCTATCTCGCCAATTT+AGG - chr1_1:79529066-79529085 None:intergenic 45.0%
CAGATATTGACGTACACCAC+GGG + chr1_1:79529455-79529474 Msa0047000:intron 45.0%
! ACAAGGATGATGATTGGCCA+AGG - chr1_1:79529579-79529598 None:intergenic 45.0%
! GTGTTGTTGATGCACATCAC+AGG + chr1_1:79529640-79529659 Msa0047000:intron 45.0%
! ATTCTCCCTGGTGCCAATTT+CGG - chr1_1:79529749-79529768 None:intergenic 45.0%
GTCTCAAGTTAGATTCTCCC+TGG - chr1_1:79529761-79529780 None:intergenic 45.0%
!! TCCCAAGTGGGCTATATAGA+TGG + chr1_1:79529828-79529847 Msa0047000:intron 45.0%
GCCATCTATATAGCCCACTT+GGG - chr1_1:79529832-79529851 None:intergenic 45.0%
TGCCATCTATATAGCCCACT+TGG - chr1_1:79529833-79529852 None:intergenic 45.0%
!! TAGTGCTGCTTATAGTGCCT+TGG + chr1_1:79529854-79529873 Msa0047000:intron 45.0%
ACAGGGATGATGATTGACCA+AGG - chr1_1:79529874-79529893 None:intergenic 45.0%
TTTGTGATGCTAGCTCACTC+TGG + chr1_1:79529932-79529951 Msa0047000:intron 45.0%
GCAATTCATGGATGTTGGTG+TGG - chr1_1:79529966-79529985 None:intergenic 45.0%
! GCTGGGTTGAAAGCAGAAAT+TGG + chr1_1:79530335-79530354 Msa0047000:CDS 45.0%
!! TACACTATTCATGCCGGTTC+GGG + chr1_1:79530639-79530658 Msa0047000:intron 45.0%
! TTTAGAGTTGCCTCTTGAGG+CGG - chr1_1:79530803-79530822 None:intergenic 45.0%
TTCTTGCCTGAATGAGGATC+GGG - chr1_1:79530899-79530918 None:intergenic 45.0%
TGGGAAAATCTCCAGGTTCA+TGG - chr1_1:79530943-79530962 None:intergenic 45.0%
! TGAACCTGGAGATTTTCCCA+TGG + chr1_1:79530943-79530962 Msa0047000:CDS 45.0%
TTTGCCATGGGAAAATCTCC+AGG - chr1_1:79530950-79530969 None:intergenic 45.0%
! GGAGATTTTCCCATGGCAAA+TGG + chr1_1:79530950-79530969 Msa0047000:CDS 45.0%
AATGGAGAAGACCCAGTTGA+AGG + chr1_1:79530974-79530993 Msa0047000:CDS 45.0%
AGAAACATCAGACGCCTCAT+TGG - chr1_1:79531023-79531042 None:intergenic 45.0%
TCTCATCAATGCCCACAAAG+TGG + chr1_1:79531224-79531243 Msa0047000:CDS 45.0%
CTCATCAATGCCCACAAAGT+GGG + chr1_1:79531225-79531244 Msa0047000:CDS 45.0%
GGGTTGAACAAGACCTTGAT+TGG + chr1_1:79531291-79531310 Msa0047000:CDS 45.0%
AACAACCGTGGCATAGATGA+TGG + chr1_1:79531711-79531730 Msa0047000:CDS 45.0%
! TCTGGAACACCAACAAGTAC+AGG + chr1_1:79531812-79531831 Msa0047000:CDS 45.0%
GATTCACTGCCTGTACTTGT+TGG - chr1_1:79531824-79531843 None:intergenic 45.0%
GTGAATCCCAACAGACTGTT+AGG + chr1_1:79531837-79531856 Msa0047000:CDS 45.0%
TCCAAGCCTAACAGTCTGTT+GGG - chr1_1:79531846-79531865 None:intergenic 45.0%
ATCCAAGCCTAACAGTCTGT+TGG - chr1_1:79531847-79531866 None:intergenic 45.0%
AATATTGTGGTCCGTAAGCG+TGG + chr1_1:79531876-79531895 Msa0047000:CDS 45.0%
ATATTGTGGTCCGTAAGCGT+GGG + chr1_1:79531877-79531896 Msa0047000:CDS 45.0%
AAACGAAAGGTGGCAACAGA+AGG - chr1_1:79532076-79532095 None:intergenic 45.0%
GCTTGAACGTAAACGAAAGG+TGG - chr1_1:79532086-79532105 None:intergenic 45.0%
CAGGCTTGAACGTAAACGAA+AGG - chr1_1:79532089-79532108 None:intergenic 45.0%
AAAGTGGTAGGACCGATAAC+AGG - chr1_1:79532108-79532127 None:intergenic 45.0%
! TCAATCCAAAGCATCCACAG+TGG + chr1_1:79532170-79532189 Msa0047000:intron 45.0%
TGCCACTCAGATCACGTATT+TGG + chr1_1:79532226-79532245 Msa0047000:intron 45.0%
GATTCATGATCGAGGTGTGT+TGG + chr1_1:79532398-79532417 Msa0047000:CDS 45.0%
TCATCATCACTTTGGTCGAG+AGG - chr1_1:79532451-79532470 None:intergenic 45.0%
TATGATGTCCACAAGCTGCA+AGG - chr1_1:79532658-79532677 None:intergenic 45.0%
AAAGTCACACCAACACTGTC+AGG - chr1_1:79532732-79532751 None:intergenic 45.0%
GTGTTTCCCTTTCATCACTG+TGG + chr1_1:79532752-79532771 Msa0047000:intron 45.0%
GCTTACGCTATTAAAGGGGA+AGG - chr1_1:79533040-79533059 None:intergenic 45.0%
CCCCTTTAATAGCGTAAGCA+TGG + chr1_1:79533041-79533060 Msa0047000:intron 45.0%
TATGCTCCCAAGCTTCTTGT+AGG - chr1_1:79533493-79533512 None:intergenic 45.0%
ATGCTCAAATCGGGAAACAC+AGG - chr1_1:79533522-79533541 None:intergenic 45.0%
CATCTACATCTTCTCGGAGA+GGG + chr1_1:79533539-79533558 Msa0047000:CDS 45.0%
ATCTACATCTTCTCGGAGAG+GGG + chr1_1:79533540-79533559 Msa0047000:CDS 45.0%
! CGTGGTTCATATGATAGTGC+TGG + chr1_1:79533698-79533717 Msa0047000:CDS 45.0%
TGGAGCTATCACATCAGAAC+AGG + chr1_1:79533739-79533758 Msa0047000:CDS 45.0%
TTTATGCAAGGTCTCCATGG+AGG + chr1_1:79533880-79533899 Msa0047000:CDS 45.0%
TTTGTAAGGCTGAAAACCCG+CGG - chr1_1:79533926-79533945 None:intergenic 45.0%
GTGTCTCAGTGTTTATGGGT+TGG + chr1_1:79534032-79534051 Msa0047000:intron 45.0%
! GTCTCAGTGTTTATGGGTTG+GGG + chr1_1:79534034-79534053 Msa0047000:intron 45.0%
ATTTCTTGAGCGGGAAGAGT+TGG + chr1_1:79534608-79534627 Msa0047000:CDS 45.0%
! AGGATGGAAGAGCATGTTCA+TGG + chr1_1:79534767-79534786 Msa0047000:CDS 45.0%
AAACTAGCTGAAGGAGACCT+TGG + chr1_1:79535134-79535153 Msa0047000:CDS 45.0%
TATTCCTTGACGAAGAGCCA+AGG - chr1_1:79535154-79535173 None:intergenic 45.0%
GGCTCTTCGTCAAGGAATAA+AGG + chr1_1:79535155-79535174 Msa0047000:CDS 45.0%
CACCTAGAACTGGAAAAGAG+GGG + chr1_1:79535210-79535229 Msa0047000:CDS 45.0%
!! TAATGGAGAGGTGATGGACA+AGG + chr1_1:79535241-79535260 Msa0047000:CDS 45.0%
GGTTGAACCCATCAGTGAAT+TGG + chr1_1:79535590-79535609 Msa0047000:intron 45.0%
GGAACTAGCCAATTCACTGA+TGG - chr1_1:79535601-79535620 None:intergenic 45.0%
! TTGACCCAAGGTCTGAGATA+AGG + chr1_1:79535768-79535787 Msa0047000:CDS 45.0%
TCTGCCTTATCTCAGACCTT+GGG - chr1_1:79535775-79535794 None:intergenic 45.0%
ATAACGGCAGTGAAAAGAGG+TGG - chr1_1:79535838-79535857 None:intergenic 45.0%
! ACCTCTTTTCACTGCCGTTA+TGG + chr1_1:79535837-79535856 Msa0047000:CDS 45.0%
! CCTCTTTTCACTGCCGTTAT+GGG + chr1_1:79535838-79535857 Msa0047000:CDS 45.0%
CGTCATGCTATTGATCCTTC+AGG + chr1_1:79535905-79535924 Msa0047000:CDS 45.0%
AGTCTCCACTTCATTGACCT+GGG - chr1_1:79535939-79535958 None:intergenic 45.0%
GTCAATGAAGTGGAGACTGA+TGG + chr1_1:79535941-79535960 Msa0047000:CDS 45.0%
!! AGCTGTTTTCCGATGAGAAG+TGG + chr1_1:79536170-79536189 Msa0047000:CDS 45.0%
CGATGAGAAGTGGTTAGAAG+TGG + chr1_1:79536180-79536199 Msa0047000:CDS 45.0%
CATCGAGGAATGAAAAGTCG+GGG - chr1_1:79536240-79536259 None:intergenic 45.0%
CCATCGAGGAATGAAAAGTC+GGG - chr1_1:79536241-79536260 None:intergenic 45.0%
! GACTTTTCATTCCTCGATGG+TGG + chr1_1:79536241-79536260 Msa0047000:CDS 45.0%
TCACAAAATCTCCACCATCG+AGG - chr1_1:79536255-79536274 None:intergenic 45.0%
! ATGATAATGCAGAAAGCCCG+AGG + chr1_1:79536338-79536357 Msa0047000:CDS 45.0%
CTGAAATTGACAGGCTGTGA+TGG + chr1_1:79536730-79536749 Msa0047000:intron 45.0%
! AGCATCAAAGAGGACTAGCA+TGG - chr1_1:79536795-79536814 None:intergenic 45.0%
TCTCAAGTCGTAACAGTGGA+GGG - chr1_1:79536913-79536932 None:intergenic 45.0%
TTCTCAAGTCGTAACAGTGG+AGG - chr1_1:79536914-79536933 None:intergenic 45.0%
! TCTAGTTCAGCTTTGTCAGG+AGG + chr1_1:79537021-79537040 Msa0047000:CDS 45.0%
! AGCTTTGTCAGGAGGTCTTA+GGG + chr1_1:79537029-79537048 Msa0047000:CDS 45.0%
CTCATGGTAGACAGCAACAT+TGG + chr1_1:79537095-79537114 Msa0047000:CDS 45.0%
TGGTTAATTCCTCTAGGCTC+TGG + chr1_1:79537115-79537134 Msa0047000:CDS 45.0%
GGTTAATTCCTCTAGGCTCT+GGG + chr1_1:79537116-79537135 Msa0047000:CDS 45.0%
TGAAGAGTGGTCACTATGAG+TGG - chr1_1:79537169-79537188 None:intergenic 45.0%
!!! TTATTTTTTATTTTTTACTT+TGG - chr1_1:79535497-79535516 None:intergenic 5.0%
!!! TTCGCCAGGAAGCGTTTTTG+AGG - chr1_1:79526469-79526488 None:intergenic 50.0%
! GAGTTTAGCGTGTTTTCGCC+AGG - chr1_1:79526483-79526502 None:intergenic 50.0%
TGAAACCCTCACTTCACCGA+AGG + chr1_1:79526526-79526545 Msa0047000:CDS 50.0%
! TCGGCTGTAGCATCGGAATT+CGG - chr1_1:79526563-79526582 None:intergenic 50.0%
! GGAATCATCGGCTGTAGCAT+CGG - chr1_1:79526570-79526589 None:intergenic 50.0%
GATGCTACAGCCGATGATTC+CGG + chr1_1:79526569-79526588 Msa0047000:CDS 50.0%
TAGTGAAACTTCCGGCTCAC+CGG - chr1_1:79526591-79526610 None:intergenic 50.0%
GGTCCAGGTAGTGAAACTTC+CGG - chr1_1:79526599-79526618 None:intergenic 50.0%
ATCGCTCCTCCATCATGAAG+CGG - chr1_1:79526620-79526639 None:intergenic 50.0%
ATCGGCGATCTTCAACACAC+CGG - chr1_1:79526702-79526721 None:intergenic 50.0%
TGTGTTGAAGATCGCCGATC+CGG + chr1_1:79526703-79526722 Msa0047000:CDS 50.0%
TTCTGTATCGCATCAACCGC+CGG - chr1_1:79526725-79526744 None:intergenic 50.0%
ATTGCTGTAGGTTACCTCCG+CGG + chr1_1:79526749-79526768 Msa0047000:CDS 50.0%
AGGACATTCACCAGCAGCAT+CGG - chr1_1:79526780-79526799 None:intergenic 50.0%
! CGACCTAGGTGATGATGCTA+TGG + chr1_1:79526847-79526866 Msa0047000:CDS 50.0%
GCTCCATAGCATCATCACCT+AGG - chr1_1:79526853-79526872 None:intergenic 50.0%
TCCGATTCAACCGATTGTCG+TGG + chr1_1:79527075-79527094 Msa0047000:CDS 50.0%
GCCACGACAATCGGTTGAAT+CGG - chr1_1:79527079-79527098 None:intergenic 50.0%
GATTCAACCGATTGTCGTGG+CGG + chr1_1:79527078-79527097 Msa0047000:CDS 50.0%
! GATTGTCGTGGCGGAATTGA+TGG + chr1_1:79527087-79527106 Msa0047000:CDS 50.0%
AGTTGAGACTACGAATCCGG+CGG + chr1_1:79527270-79527289 Msa0047000:CDS 50.0%
!! ATAAGACGGCTTTGGAAGGG+AGG + chr1_1:79527353-79527372 Msa0047000:CDS 50.0%
CGAGGAGAGGGATGATGATT+TGG + chr1_1:79527405-79527424 Msa0047000:CDS 50.0%
!!! GCTGAGGAGGGATGCTTTTT+TGG + chr1_1:79527447-79527466 Msa0047000:CDS 50.0%
GTCTATGAAGTCGCCGTCTA+AGG + chr1_1:79527492-79527511 Msa0047000:CDS 50.0%
TATGAAGTCGCCGTCTAAGG+AGG + chr1_1:79527495-79527514 Msa0047000:CDS 50.0%
! ATCTTCCCTCTCATCGACTG+CGG - chr1_1:79527532-79527551 None:intergenic 50.0%
GTCGATGAGAGGGAAGATTG+TGG + chr1_1:79527534-79527553 Msa0047000:CDS 50.0%
GAGAGGGAAGATTGTGGCAT+TGG + chr1_1:79527540-79527559 Msa0047000:CDS 50.0%
TAGGGTGGTGAGATGTGTCT+TGG + chr1_1:79527737-79527756 Msa0047000:intron 50.0%
GAATACCAGTGGATGGGTAG+AGG + chr1_1:79528042-79528061 Msa0047000:intron 50.0%
CTAGACTCGCATGTCTGGTA+TGG - chr1_1:79528116-79528135 None:intergenic 50.0%
ACCAAATTGACGCGGTAAGC+GGG + chr1_1:79528305-79528324 Msa0047000:intron 50.0%
AGGCAAAAGCGGAACAAAGC+GGG - chr1_1:79528602-79528621 None:intergenic 50.0%
AGGTAGGTCAACATCAGCAG+TGG - chr1_1:79528968-79528987 None:intergenic 50.0%
TAGCACATCCCCTTCATCCT+AGG - chr1_1:79529039-79529058 None:intergenic 50.0%
AGTTAGGTGCACCACTAGCA+AGG + chr1_1:79529237-79529256 Msa0047000:intron 50.0%
TAATCGTCTTCCCTTGAGCC+AGG + chr1_1:79529369-79529388 Msa0047000:intron 50.0%
TCTTCCCTTGAGCCAGGTTT+AGG + chr1_1:79529375-79529394 Msa0047000:intron 50.0%
CTTCCCTTGAGCCAGGTTTA+GGG + chr1_1:79529376-79529395 Msa0047000:intron 50.0%
! TTTCTAGTCCTAGGCATGCG+CGG + chr1_1:79529498-79529517 Msa0047000:intron 50.0%
AAACACATCCCGCTCATGCA+AGG - chr1_1:79529694-79529713 None:intergenic 50.0%
CCAATTTCGGTGGGCAAGTT+TGG - chr1_1:79529736-79529755 None:intergenic 50.0%
CCAAACTTGCCCACCGAAAT+TGG + chr1_1:79529733-79529752 Msa0047000:intron 50.0%
CTTGGAGTGTACTCCTCTCA+AGG - chr1_1:79529783-79529802 None:intergenic 50.0%
! CTTGAGAGGAGTACACTCCA+AGG + chr1_1:79529781-79529800 Msa0047000:intron 50.0%
TTCATGGATGTTGGTGTGGG+TGG - chr1_1:79529962-79529981 None:intergenic 50.0%
GGACTTCTTAAAACCGCCCA+AGG + chr1_1:79530746-79530765 Msa0047000:CDS 50.0%
CTGTGGTTGTTACACCAGGA+GGG - chr1_1:79530775-79530794 None:intergenic 50.0%
ACTGTGGTTGTTACACCAGG+AGG - chr1_1:79530776-79530795 None:intergenic 50.0%
!! GTTGATAACGGCCATGAACC+TGG + chr1_1:79530929-79530948 Msa0047000:CDS 50.0%
CGGTGAGTTACCCACTTTGT+GGG - chr1_1:79531238-79531257 None:intergenic 50.0%
CCACAAAGTGGGTAACTCAC+CGG + chr1_1:79531236-79531255 Msa0047000:CDS 50.0%
!! CTTCAAGGCTTTAGACTGCC+TGG + chr1_1:79531420-79531439 Msa0047000:CDS 50.0%
CACTGACGCTCACAATCCTA+TGG + chr1_1:79531566-79531585 Msa0047000:CDS 50.0%
TCCCAACAGACTGTTAGGCT+TGG + chr1_1:79531842-79531861 Msa0047000:CDS 50.0%
TATTGTGGTCCGTAAGCGTG+GGG + chr1_1:79531878-79531897 Msa0047000:CDS 50.0%
ACGACGGATCAGATCATCAC+TGG - chr1_1:79531922-79531941 None:intergenic 50.0%
GAAGACCACTGTGGATGCTT+TGG - chr1_1:79532178-79532197 None:intergenic 50.0%
GCATCTACATCTTCTCGGAG+AGG + chr1_1:79533538-79533557 Msa0047000:CDS 50.0%
TCTACATCTTCTCGGAGAGG+GGG + chr1_1:79533541-79533560 Msa0047000:CDS 50.0%
GCAAAGAATGTGGCATCTGG+TGG - chr1_1:79533569-79533588 None:intergenic 50.0%
TGAAGAAGAAAGGACCTGGG+AGG + chr1_1:79533648-79533667 Msa0047000:CDS 50.0%
! GGCTTTATGCAAGGTCTCCA+TGG + chr1_1:79533877-79533896 Msa0047000:CDS 50.0%
TGGTGATCTCAGTTCCTCCA+TGG - chr1_1:79533897-79533916 None:intergenic 50.0%
TGAGATCACCATCTGATCCG+CGG + chr1_1:79533906-79533925 Msa0047000:CDS 50.0%
TTGACCACACAAGCCGGATA+CGG - chr1_1:79534485-79534504 None:intergenic 50.0%
AGATGCTTGACCACACAAGC+CGG - chr1_1:79534491-79534510 None:intergenic 50.0%
TCCACAGCTTCACCTAGAAC+TGG + chr1_1:79535200-79535219 Msa0047000:CDS 50.0%
!! TCCAGTTCTAGGTGAAGCTG+TGG - chr1_1:79535204-79535223 None:intergenic 50.0%
! CTCCCCTCTTTTCCAGTTCT+AGG - chr1_1:79535215-79535234 None:intergenic 50.0%
!! GGGGAGACAAGATAATGGAG+AGG + chr1_1:79535229-79535248 Msa0047000:CDS 50.0%
!! ACTGATGGGTTCAACCTCAG+TGG - chr1_1:79535586-79535605 None:intergenic 50.0%
! CAGTGAATTGGCTAGTTCCC+AGG + chr1_1:79535602-79535621 Msa0047000:intron 50.0%
!! CTGAGCTTAGCTTTGACCCA+AGG + chr1_1:79535756-79535775 Msa0047000:CDS 50.0%
CTCTGCCTTATCTCAGACCT+TGG - chr1_1:79535776-79535795 None:intergenic 50.0%
CCCATAACGGCAGTGAAAAG+AGG - chr1_1:79535841-79535860 None:intergenic 50.0%
CAGTCTCCACTTCATTGACC+TGG - chr1_1:79535940-79535959 None:intergenic 50.0%
GCGAGCTTGATCAAGATGCA+TGG + chr1_1:79535963-79535982 Msa0047000:CDS 50.0%
ATGCACGTTAGCCCTCCAAT+TGG + chr1_1:79535997-79536016 Msa0047000:CDS 50.0%
! AAAGCGTCCTCATCAAAGCC+TGG + chr1_1:79536099-79536118 Msa0047000:CDS 50.0%
! CCCGACTTTTCATTCCTCGA+TGG + chr1_1:79536238-79536257 Msa0047000:CDS 50.0%
TCATGTGAGCTAGACTCAGC+AGG - chr1_1:79536322-79536341 None:intergenic 50.0%
CATAAAGACGGTCAGTCCTC+GGG - chr1_1:79536357-79536376 None:intergenic 50.0%
GCATAAAGACGGTCAGTCCT+CGG - chr1_1:79536358-79536377 None:intergenic 50.0%
CAGTGGAGGGTCTTGCATTT+GGG - chr1_1:79536900-79536919 None:intergenic 50.0%
ACAGTGGAGGGTCTTGCATT+TGG - chr1_1:79536901-79536920 None:intergenic 50.0%
! TTGGTGGTTTGTCCACAACG+AGG - chr1_1:79536973-79536992 None:intergenic 50.0%
GGACAAACCACCAAGCTATG+AGG + chr1_1:79536979-79536998 Msa0047000:CDS 50.0%
CAAACCACCAAGCTATGAGG+AGG + chr1_1:79536982-79537001 Msa0047000:CDS 50.0%
TCAACCTCCTCATAGCTTGG+TGG - chr1_1:79536989-79537008 None:intergenic 50.0%
ACCAAGCTATGAGGAGGTTG+AGG + chr1_1:79536988-79537007 Msa0047000:CDS 50.0%
ACCTCAACCTCCTCATAGCT+TGG - chr1_1:79536992-79537011 None:intergenic 50.0%
! CAGCTTTGTCAGGAGGTCTT+AGG + chr1_1:79537028-79537047 Msa0047000:CDS 50.0%
GCATATCACTGAGAGCGACT+TGG - chr1_1:79537294-79537313 None:intergenic 50.0%
TTCCGGCTCACCGGAATCAT+CGG - chr1_1:79526582-79526601 None:intergenic 55.0%
GAGCCGGAAGTTTCACTACC+TGG + chr1_1:79526593-79526612 Msa0047000:CDS 55.0%
CTACCTGGACCGCTTCATGA+TGG + chr1_1:79526608-79526627 Msa0047000:CDS 55.0%
TATCGCATCAACCGCCGGAT+CGG - chr1_1:79526720-79526739 None:intergenic 55.0%
! GGCGGAATTGATGGATCCAG+TGG + chr1_1:79527096-79527115 Msa0047000:CDS 55.0%
TCCATCAGGTACGCCGAGTA+AGG + chr1_1:79527204-79527223 Msa0047000:CDS 55.0%
ACCTTACTCGGCGTACCTGA+TGG - chr1_1:79527208-79527227 None:intergenic 55.0%
AGGTACGCCGAGTAAGGTTG+TGG + chr1_1:79527210-79527229 Msa0047000:CDS 55.0%
GCCATCGCCACAACCTTACT+CGG - chr1_1:79527220-79527239 None:intergenic 55.0%
GTTGTGGCGATGGCTCATGA+TGG + chr1_1:79527226-79527245 Msa0047000:CDS 55.0%
! TACGAATCCGGCGGATTTGC+TGG + chr1_1:79527279-79527298 Msa0047000:CDS 55.0%
GTCGAATCCAGCAAATCCGC+CGG - chr1_1:79527289-79527308 None:intergenic 55.0%
!! GGCGGATTTGCTGGATTCGA+CGG + chr1_1:79527288-79527307 Msa0047000:CDS 55.0%
!! ACGGCTTTGGAAGGGAGGAA+AGG + chr1_1:79527358-79527377 Msa0047000:CDS 55.0%
!! CGGCTTTGGAAGGGAGGAAA+GGG + chr1_1:79527359-79527378 Msa0047000:CDS 55.0%
!! GGCTTTGGAAGGGAGGAAAG+GGG + chr1_1:79527360-79527379 Msa0047000:CDS 55.0%
! TCTCATCGACTGCGGATCAG+CGG - chr1_1:79527524-79527543 None:intergenic 55.0%
CTGATCCGCAGTCGATGAGA+GGG + chr1_1:79527524-79527543 Msa0047000:CDS 55.0%
GGCAACTAGACTCGCATGTC+TGG - chr1_1:79528121-79528140 None:intergenic 55.0%
AGTCGCGCGTTAGGCAAAAG+CGG - chr1_1:79528613-79528632 None:intergenic 55.0%
! CTTTTGCCTAACGCGCGACT+CGG + chr1_1:79528613-79528632 Msa0047000:intron 55.0%
CAGCCCTAAACCTGGCTCAA+GGG - chr1_1:79529382-79529401 None:intergenic 55.0%
TCAGCCCTAAACCTGGCTCA+AGG - chr1_1:79529383-79529402 None:intergenic 55.0%
! GCCAGGTTTAGGGCTGAGAT+AGG + chr1_1:79529386-79529405 Msa0047000:intron 55.0%
GCCTATCTCAGCCCTAAACC+TGG - chr1_1:79529390-79529409 None:intergenic 55.0%
TAAGATCGGGCAATTGCCCG+TGG - chr1_1:79529474-79529493 None:intergenic 55.0%
TTCTAGTCCTAGGCATGCGC+GGG + chr1_1:79529499-79529518 Msa0047000:intron 55.0%
! TCCCTGGTGCCAATTTCGGT+GGG - chr1_1:79529745-79529764 None:intergenic 55.0%
ACACTCCAAGGTCCCATGAG+CGG + chr1_1:79529793-79529812 Msa0047000:intron 55.0%
!! TATTCATGCCGGTTCGGGTG+TGG + chr1_1:79530644-79530663 Msa0047000:intron 55.0%
CAAGACAACCACACCCGAAC+CGG - chr1_1:79530655-79530674 None:intergenic 55.0%
TACACCAGGAGGGACACCTT+GGG - chr1_1:79530765-79530784 None:intergenic 55.0%
TTACACCAGGAGGGACACCT+TGG - chr1_1:79530766-79530785 None:intergenic 55.0%
CTCTTGAGGCGGCAAAACTG+TGG - chr1_1:79530792-79530811 None:intergenic 55.0%
! CACAGTTTTGCCGCCTCAAG+AGG + chr1_1:79530790-79530809 Msa0047000:CDS 55.0%
CGCATTCCCGATCCTCATTC+AGG + chr1_1:79530890-79530909 Msa0047000:CDS 55.0%
CCGGTGAGTTACCCACTTTG+TGG - chr1_1:79531239-79531258 None:intergenic 55.0%
!! AGGCTTTAGACTGCCTGGTG+AGG + chr1_1:79531425-79531444 Msa0047000:CDS 55.0%
CGTGGGGAGGACAGTCATAT+GGG + chr1_1:79531894-79531913 Msa0047000:CDS 55.0%
GTGGGGAGGACAGTCATATG+GGG + chr1_1:79531895-79531914 Msa0047000:CDS 55.0%
ATCAGCAGGAGAATGCAGGG+AGG - chr1_1:79532584-79532603 None:intergenic 55.0%
GCAGCTACCACATTGATGCG+TGG + chr1_1:79533680-79533699 Msa0047000:CDS 55.0%
GGAATCGGCAGTAATGCTGC+TGG + chr1_1:79533719-79533738 Msa0047000:CDS 55.0%
GAGATCACCATCTGATCCGC+GGG + chr1_1:79533907-79533926 Msa0047000:CDS 55.0%
CTGAAAACCCGCGGATCAGA+TGG - chr1_1:79533917-79533936 None:intergenic 55.0%
! TGAACCGTATCCGGCTTGTG+TGG + chr1_1:79534478-79534497 Msa0047000:CDS 55.0%
GGCTTGTGTGGTCAAGCATC+TGG + chr1_1:79534490-79534509 Msa0047000:CDS 55.0%
! GAGACCTTGGCTCTTCGTCA+AGG + chr1_1:79535147-79535166 Msa0047000:CDS 55.0%
! TGGCTAGTTCCCAGGTCAAC+CGG + chr1_1:79535610-79535629 Msa0047000:intron 55.0%
GCAGTGAAAAGAGGTGGCCA+TGG - chr1_1:79535832-79535851 None:intergenic 55.0%
TAGCGCCCAGGTCAATGAAG+TGG + chr1_1:79535931-79535950 Msa0047000:CDS 55.0%
! ATGCCAGCCAGGCTTTGATG+AGG - chr1_1:79536109-79536128 None:intergenic 55.0%
CATCAAAGCCTGGCTGGCAT+TGG + chr1_1:79536109-79536128 Msa0047000:CDS 55.0%
!! CCTGGCTGGCATTGGTATTG+CGG + chr1_1:79536117-79536136 Msa0047000:CDS 55.0%
CTTCGTTTCCCAGAGCCTAG+AGG - chr1_1:79537127-79537146 None:intergenic 55.0%
GACGTGGCTGAGACGGGAAT+CGG - chr1_1:79526423-79526442 None:intergenic 60.0%
GACGATGACGTGGCTGAGAC+GGG - chr1_1:79526429-79526448 None:intergenic 60.0%
GGACGATGACGTGGCTGAGA+CGG - chr1_1:79526430-79526449 None:intergenic 60.0%
AGCCGATGATTCCGGTGAGC+CGG + chr1_1:79526577-79526596 Msa0047000:CDS 60.0%
CCTCCATCATGAAGCGGTCC+AGG - chr1_1:79526614-79526633 None:intergenic 60.0%
CCTGGACCGCTTCATGATGG+AGG + chr1_1:79526611-79526630 Msa0047000:CDS 60.0%
GTTGAAGATCGCCGATCCGG+CGG + chr1_1:79526706-79526725 Msa0047000:CDS 60.0%
GCCGAGTAAGGTTGTGGCGA+TGG + chr1_1:79527216-79527235 Msa0047000:CDS 60.0%
AGGAAAGGGGAGCTGGTGGA+TGG + chr1_1:79527373-79527392 Msa0047000:CDS 60.0%
ATGGAGAGGTGGTCGAGGAG+AGG + chr1_1:79527392-79527411 Msa0047000:CDS 60.0%
TGGAGAGGTGGTCGAGGAGA+GGG + chr1_1:79527393-79527412 Msa0047000:CDS 60.0%
! TCATCGACTGCGGATCAGCG+GGG - chr1_1:79527522-79527541 None:intergenic 60.0%
! CTCATCGACTGCGGATCAGC+GGG - chr1_1:79527523-79527542 None:intergenic 60.0%
GCTGATCCGCAGTCGATGAG+AGG + chr1_1:79527523-79527542 Msa0047000:CDS 60.0%
ACTGCCCTCTACCCATCCAC+TGG - chr1_1:79528050-79528069 None:intergenic 60.0%
GCCCGCTTACCGCGTCAATT+TGG - chr1_1:79528309-79528328 None:intergenic 60.0%
GGTCAACGCGGGCAAAAAGC+GGG - chr1_1:79528581-79528600 None:intergenic 60.0%
GGGTCAACGCGGGCAAAAAG+CGG - chr1_1:79528582-79528601 None:intergenic 60.0%
GGAACAAAGCGGGTCAACGC+GGG - chr1_1:79528592-79528611 None:intergenic 60.0%
CGGAACAAAGCGGGTCAACG+CGG - chr1_1:79528593-79528612 None:intergenic 60.0%
!! AAGTTGGTGCGCCACCAGCA+AGG + chr1_1:79528771-79528790 Msa0047000:intron 60.0%
AACACATCCCGCGCATGCCT+AGG - chr1_1:79529509-79529528 None:intergenic 60.0%
TGCCCACCGAAATTGGCACC+AGG + chr1_1:79529740-79529759 Msa0047000:intron 60.0%
GCCCACCGAAATTGGCACCA+GGG + chr1_1:79529741-79529760 Msa0047000:intron 60.0%
! CTCCCTGGTGCCAATTTCGG+TGG - chr1_1:79529746-79529765 None:intergenic 60.0%
CACTCCAAGGTCCCATGAGC+GGG + chr1_1:79529794-79529813 Msa0047000:intron 60.0%
ACATCCCGCTCATGGGACCT+TGG - chr1_1:79529801-79529820 None:intergenic 60.0%
GACTGTCCTCCCCACGCTTA+CGG - chr1_1:79531890-79531909 None:intergenic 60.0%
GCGTGGGGAGGACAGTCATA+TGG + chr1_1:79531893-79531912 Msa0047000:CDS 60.0%
GCTGCATACTGCATCCTCCC+AGG - chr1_1:79533665-79533684 None:intergenic 60.0%
TCCCAGGTCAACCGGTTGAG+CGG + chr1_1:79535618-79535637 Msa0047000:intron 60.0%
GAGGTGGCCATGGTTGCGTA+AGG - chr1_1:79535822-79535841 None:intergenic 60.0%
TCCTTCAGGGAATAGCGCCC+AGG + chr1_1:79535919-79535938 Msa0047000:CDS 60.0%
ACCTGGGCGCTATTCCCTGA+AGG - chr1_1:79535923-79535942 None:intergenic 60.0%
CGTCCTCATCAAAGCCTGGC+TGG + chr1_1:79536103-79536122 Msa0047000:CDS 60.0%
CCGCAATACCAATGCCAGCC+AGG - chr1_1:79536120-79536139 None:intergenic 60.0%
CGAGAGCAGGGACGATGACG+TGG - chr1_1:79526439-79526458 None:intergenic 65.0%
! GAGCTCGCCGCGTTGATGAG+AGG - chr1_1:79526680-79526699 None:intergenic 65.0%
CTCATCAACGCGGCGAGCTC+CGG + chr1_1:79526680-79526699 Msa0047000:CDS 65.0%
!! CAGCAGCATCGGCTTCACCG+CGG - chr1_1:79526769-79526788 None:intergenic 65.0%
GGAAGGGAGGAAAGGGGAGC+TGG + chr1_1:79527366-79527385 Msa0047000:CDS 65.0%
AGGGAGGAAAGGGGAGCTGG+TGG + chr1_1:79527369-79527388 Msa0047000:CDS 65.0%
! AGGGGAGCTGGTGGATGGAG+AGG + chr1_1:79527378-79527397 Msa0047000:CDS 65.0%
! GGAGCTGGTGGATGGAGAGG+TGG + chr1_1:79527381-79527400 Msa0047000:CDS 65.0%
GGTGGATGGAGAGGTGGTCG+AGG + chr1_1:79527387-79527406 Msa0047000:CDS 65.0%
TCAGCGGGGGCCTCCTTAGA+CGG - chr1_1:79527508-79527527 None:intergenic 65.0%
! CATCGACTGCGGATCAGCGG+GGG - chr1_1:79527521-79527540 None:intergenic 65.0%
ACCAGGAGGGACACCTTGGG+CGG - chr1_1:79530762-79530781 None:intergenic 65.0%
TGTGGTCCGTAAGCGTGGGG+AGG + chr1_1:79531881-79531900 Msa0047000:CDS 65.0%
CCCGCTCAACCGGTTGACCT+GGG - chr1_1:79535622-79535641 None:intergenic 65.0%
CCCAGGTCAACCGGTTGAGC+GGG + chr1_1:79535619-79535638 Msa0047000:intron 65.0%
!! CAGCATCGGCTTCACCGCGG+AGG - chr1_1:79526766-79526785 None:intergenic 70.0%
CGCGGTGAAGCCGATGCTGC+TGG + chr1_1:79526767-79526786 Msa0047000:CDS 70.0%
ACGCGACCGAGTCGCGCGTT+AGG - chr1_1:79528622-79528641 None:intergenic 70.0%
CGGTCGCGTTCTGACGCGCT+AGG + chr1_1:79528633-79528652 Msa0047000:intron 70.0%
! ACCGCCCAAGGTGTCCCTCC+TGG + chr1_1:79530758-79530777 Msa0047000:CDS 70.0%
GCCCGCTCAACCGGTTGACC+TGG - chr1_1:79535623-79535642 None:intergenic 70.0%
GGTCAACCGGTTGAGCGGGC+CGG + chr1_1:79535623-79535642 Msa0047000:intron 70.0%
ACCGGTTGAGCGGGCCGGTT+CGG + chr1_1:79535628-79535647 Msa0047000:intron 70.0%
ACCGAACCGGCCCGCTCAAC+CGG - chr1_1:79535632-79535651 None:intergenic 70.0%
!! TTGAGCGGGCCGGTTCGGTC+AGG + chr1_1:79535633-79535652 Msa0047000:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 79526404 79537368 79526404 ID=Msa0047000;Name=Msa0047000
chr1_1 mRNA 79526404 79537368 79526404 ID=Msa0047000-mRNA-1;Parent=Msa0047000;Name=Msa0047000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.90|1|0.9|0.90|11|14|1789
chr1_1 exon 79526404 79527617 79526404 ID=Msa0047000-mRNA-1:exon:27436;Parent=Msa0047000-mRNA-1
chr1_1 exon 79530214 79530531 79530214 ID=Msa0047000-mRNA-1:exon:27437;Parent=Msa0047000-mRNA-1
chr1_1 exon 79530736 79531081 79530736 ID=Msa0047000-mRNA-1:exon:27438;Parent=Msa0047000-mRNA-1
chr1_1 exon 79531177 79531599 79531177 ID=Msa0047000-mRNA-1:exon:27439;Parent=Msa0047000-mRNA-1
chr1_1 exon 79531687 79531979 79531687 ID=Msa0047000-mRNA-1:exon:27440;Parent=Msa0047000-mRNA-1
chr1_1 exon 79532360 79532633 79532360 ID=Msa0047000-mRNA-1:exon:27441;Parent=Msa0047000-mRNA-1
chr1_1 exon 79533455 79533960 79533455 ID=Msa0047000-mRNA-1:exon:27442;Parent=Msa0047000-mRNA-1
chr1_1 exon 79534467 79534788 79534467 ID=Msa0047000-mRNA-1:exon:27443;Parent=Msa0047000-mRNA-1
chr1_1 exon 79534918 79535299 79534918 ID=Msa0047000-mRNA-1:exon:27444;Parent=Msa0047000-mRNA-1
chr1_1 exon 79535750 79536429 79535750 ID=Msa0047000-mRNA-1:exon:27445;Parent=Msa0047000-mRNA-1
chr1_1 exon 79536743 79537368 79536743 ID=Msa0047000-mRNA-1:exon:27446;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79526404 79527617 79526404 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79530214 79530531 79530214 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79530736 79531081 79530736 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79531177 79531599 79531177 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79531687 79531979 79531687 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79532360 79532633 79532360 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79533455 79533960 79533455 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79534467 79534788 79534467 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79534918 79535299 79534918 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79535750 79536429 79535750 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 CDS 79536743 79537354 79536743 ID=Msa0047000-mRNA-1:cds;Parent=Msa0047000-mRNA-1
chr1_1 three_prime_UTR 79537355 79537368 79537355 ID=Msa0047000-mRNA-1:three_prime_utr;Parent=Msa0047000-mRNA-1
Gene Sequence

>Msa0047000

ATGGCTTCTTCGGAAGCCGATTCCCGTCTCAGCCACGTCATCGTCCCTGCTCTCGAGAAAATCCTCAAAAACGCTTCCTGGCGAAAACACGCTAAACTCGCTCATGAGTGTAAATCCGTCACTGAAACCCTCACTTCACCGAAGGATATTCAATCTCCGAATTCCGATGCTACAGCCGATGATTCCGGTGAGCCGGAAGTTTCACTACCTGGACCGCTTCATGATGGAGGAGCGATCGAGTATTCTTTAGCTGAATCTGAAACGATTCTATCTCCTCTCATCAACGCGGCGAGCTCCGGTGTGTTGAAGATCGCCGATCCGGCGGTTGATGCGATACAGAAGCTGATTGCTGTAGGTTACCTCCGCGGTGAAGCCGATGCTGCTGGTGAATGTCCTGAATCGAAGTTTCTAGCGAGATTGATTGAATCGGTGTGTAAATGTCACGACCTAGGTGATGATGCTATGGAGCTTTTGGTGTTGAAGACGCTTTTATCTGCAGTAACTTCAATTTCGCTTCGGATTCACGGTGATTGTTTGCTTTTGATTGTAAGGACTTGTTATGATATCTATTTAGGTAGTAAGAATGTGGTGAATCAAACGACGGCTAAAGCGTCGTTGATTCAGATGTTAGTGATTGTCTTTAGGAGAATGGAGGCGGATTCGTCAACTGTTCCGATTCAACCGATTGTCGTGGCGGAATTGATGGATCCAGTGGAGAAATCTGATGTTGATAGCTCTATGACAGTGTTTGTGCAAGGTTTTATAACAAAAATAATGCAGGATATAGATGGAGTTTTGCATCCATCAGGTACGCCGAGTAAGGTTGTGGCGATGGCTCATGATGGTGCGTTTCAGACTACTGCGACAGTTGAGACTACGAATCCGGCGGATTTGCTGGATTCGACGGATAAGGATATGTTGGATGCAAAGTATTGGGAGATTAGTATGTATAAGACGGCTTTGGAAGGGAGGAAAGGGGAGCTGGTGGATGGAGAGGTGGTCGAGGAGAGGGATGATGATTTGGAGATTCAGATTGGTAATAAGCTGAGGAGGGATGCTTTTTTGGTGTTTAGGGCACTCTGTAAATTGTCTATGAAGTCGCCGTCTAAGGAGGCCCCCGCTGATCCGCAGTCGATGAGAGGGAAGATTGTGGCATTGGAGTTGTTGAAAATTTTGTTGGAGAATGCTGGAGCTGTTTTCAGAACTAGTGAAAGGTTTTTGGGTGCCATCAAGCAGTACTTATGCCTATCATTGTTAAAGAACAGTGCTTCAACTCTTATGATCGTATTTCAGTTATCATGCTCTATCTTCATCAGTCTGGTATCAAGATTTAGAGCTGGGTTGAAAGCAGAAATTGGAGTATTTTTCCCAATGATTGTTCTCAGGGTTCTAGAAAATGTTGCTCAACCTAATTTTCAGCAAAAGATGATTGTGCTTCGTTTTCTAGAGAAACTTTGTCTTGATTCACAGATATTGGTAGACATTTTTATCAACTACGATTGTGATGTCAATTCATCGAACATATTTGAAAGGATGGTAAATGGACTTCTTAAAACCGCCCAAGGTGTCCCTCCTGGTGTAACAACCACAGTTTTGCCGCCTCAAGAGGCAACTCTAAAACTTGAAGCCATGAAATGTTTGGTTGCTGTTTTGAAATCAATGGGAGACTGGATGAACAAACAAATGCGCATTCCCGATCCTCATTCAGGCAAGAAAATTGAAGCAGTTGATAACGGCCATGAACCTGGAGATTTTCCCATGGCAAATGGTAATGGAGAAGACCCAGTTGAAGGATCAGATACTCATTCTGAAATATCCAATGAGGCGTCTGATGTTTCTAATATTGAGCAACGCCGGGCTTATAAGCTAGAACTTCAGGAAGGTATATCGCTCTTTAATAGGAAGCCAAAGAAAGGAATTGAGTTTCTCATCAATGCCCACAAAGTGGGTAACTCACCGGAAGATATTGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACCTTGATTGGTGATTATCTTGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCCTATGTGGATTCTTTTGACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGATGTTTCTTCAAGGCTTTAGACTGCCTGGTGAGGCACAAAAAATTGATCGAATCATGGAAAAGTTTGCTGAACGTTATTGCAAATGCAATCCAAAAGTCTTTTCTAGTGCTGATACAGCATATGTCCTTGCTTATTCTGTGATATTGTTGAACACTGACGCTCACAATCCTATGGTGAAGAATAAGATGTCTCCTGAAGATTTCATAAAAAACAACCGTGGCATAGATGATGGAAAAGATATACCAGAGGAATACTTGAGGTCTTTGTTTGAGAGAATATCTAGAAATGAGATCAAAATGAAAGATGTTGATCTGGAACACCAACAAGTACAGGCAGTGAATCCCAACAGACTGTTAGGCTTGGATAGTATATTGAATATTGTGGTCCGTAAGCGTGGGGAGGACAGTCATATGGGGACCAGTGATGATCTGATCCGTCGTATGCAAGAAGAATTCAGAGAAAAAGCTCGCAAAACTGAGTCAGTCTATTACGCAGCAACTGATGTAGTAATCCTTAGATTCATGATCGAGGTGTGTTGGGCACCAATGTTAGCTGCTTTTAGCGTTCCTCTCGACCAAAGTGATGATGAAATTGTAATAGCTCTGTGTCTTGAAGGCTTCCGCTATGCTATTCATGTTACATCTGTGATGTCAATGAAGACACATCGGGATGCTTATGTGACTTCATTAGCAAAGTTTACCTCCCTGCATTCTCCTGCTGATATTAAGCAGAAAAATGTAGATGCAATCAAGGCGATAGTTACTATTGCTGATGAGGATGGGAATTACCTACAAGAAGCTTGGGAGCATATTTTGACCTGTGTTTCCCGATTTGAGCATCTACATCTTCTCGGAGAGGGGGCTCCACCAGATGCCACATTCTTTGCTTTTCCTCAGAATGATTCTGAAAAAGTAAAGCAAACTAAAACAACTATTCTTCCGGTTTTGAAGAAGAAAGGACCTGGGAGGATGCAGTATGCAGCTACCACATTGATGCGTGGTTCATATGATAGTGCTGGAATCGGCAGTAATGCTGCTGGAGCTATCACATCAGAACAGGTGAACAGTCTAGTTTCTAACTTGAATATGTTGGAACAAGTTGGAAGCTCAGAAATGAATCGAATATTCACACGGAGTCAAAAGTTGAATAGTGAGGCCATAATAGACTTTGTTAAGGCTTTATGCAAGGTCTCCATGGAGGAACTGAGATCACCATCTGATCCGCGGGTTTTCAGCCTTACAAAGATAGTGGAGATTGCGCACTATAATATGAACCGTATCCGGCTTGTGTGGTCAAGCATCTGGCACGTTCTTTCAGATTTCTTTGTTACCATTGGTTGTTCAGGAAATCTTTCGATTGCAATTTTTGCTATGGATTCCTTGCGTCAGTTGTCAATGAAATTTCTTGAGCGGGAAGAGTTGGCTAACTATAATTTCCAAAATGAATTTATGAAGCCTTTTGTGATTGTTATGAGAAAGAGTAGTGCTGTTGAAATTAGAGAGCTTATTATCAGATGTGTCTCTCAAATGGTTTTATCTCGTGTCAACAATGTTAAATCAGGATGGAAGAGCATGTTCATGGTATTTACAACAGCAGCATATGATGACCACAAAAACATTGTACTCTTGGCTTTTGAAATTATTGAGAAGATTATTCGAGATTACTTTCCATACATCACTGAGACTGAAACTACCACCTTTACAGATTGTGTCAATTGTCTAATTGCATTCACCAATAGTAGATTTAACAAAGAGATTAGCTTAAATGCCATCACTTTCCTTCGATTCTGTGCAACAAAACTAGCTGAAGGAGACCTTGGCTCTTCGTCAAGGAATAAAGGAAAGGAAACTTCTGGAAAGATTTCCACAGCTTCACCTAGAACTGGAAAAGAGGGGAGACAAGATAATGGAGAGGTGATGGACAAGGACGATCATCTCTATTTCTGGTTTCCTTTATTGGCTGGTTTGTCTGAGCTTAGCTTTGACCCAAGGTCTGAGATAAGGCAGAGTGCTTTGCAAGTCCTATTTGAAACCTTACGCAACCATGGCCACCTCTTTTCACTGCCGTTATGGGAAAGAGTATTTGAATCAGTCCTATTCCCGATTTTCGATTATGTTCGTCATGCTATTGATCCTTCAGGGAATAGCGCCCAGGTCAATGAAGTGGAGACTGATGGCGAGCTTGATCAAGATGCATGGCTCTATGAAACATGCACGTTAGCCCTCCAATTGGTTGTAGATCTTTTTATCAACTTCTACAGCACTGTTAACCCACTTTTAAAGAAGGTGCTGATGCTCCTTATAAGCTTTATAAAGCGTCCTCATCAAAGCCTGGCTGGCATTGGTATTGCGGCATTTGTTCGTTTGATGAGTAATGCTGGGGAGCTGTTTTCCGATGAGAAGTGGTTAGAAGTGGTCTTGTCACTAAAGGATGCAGCAAATGCAACACTCCCCGACTTTTCATTCCTCGATGGTGGAGATTTTGTGACTAGAAATGATCAACATACTTCAAAAGCTGAAGATGACAGAGATCCTGCTGAGTCTAGCTCACATGATAATGCAGAAAGCCCGAGGACTGACCGTCTTTATGCTTATTTATCTGATGCAAAATGTCGGGCAGCTGTTCAGCTTTTATTGATTCAGGCTGTGATGGAGATTTATAACATATACCGAACTCAACTTTCAGCAAAAGCCATGCTAGTCCTCTTTGATGCTATGCGTAATGTGGCATCACACGCTCACAAGATTAACAGCAATACTATTTTACGCTCAAAGTTACAAGAGTTTGGGTCTATGACCCAAATGCAAGACCCTCCACTGTTACGACTTGAGAATGAGTCCTACCAAATATGCATCACATTTTTACAGAACCTCGTTGTGGACAAACCACCAAGCTATGAGGAGGTTGAGGTTGAGACTCATCTAGTTCAGCTTTGTCAGGAGGTCTTAGGGTTTTATATTGAAGTAGCAGGCTCTGGACAAGTGTCTGAATCTTCTCATGGTAGACAGCAACATTGGTTAATTCCTCTAGGCTCTGGGAAACGAAGAGAATTAGCTGCACGTGCACCACTCATAGTGACCACTCTTCAGACTATTAGTAATTTGGGAGATAGTTCTTTTGAGAAAAATCTGGTGCATTTTTTCCCTCTTCTCTCAAGCTTGATAAGTTGTGAACATGGATCAACAGAGGTCCAAGTCGCTCTCAGTGATATGCTTAGTTTATCAGTTGGTCCTCTTTTACTACGGTCATGTTGA
Protein sequence

>Msa0047000

MASSEADSRLSHVIVPALEKILKNASWRKHAKLAHECKSVTETLTSPKDIQSPNSDATADDSGEPEVSLPGPLHDGGAIEYSLAESETILSPLINAASSGVLKIADPAVDAIQKLIAVGYLRGEADAAGECPESKFLARLIESVCKCHDLGDDAMELLVLKTLLSAVTSISLRIHGDCLLLIVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVPIQPIVVAELMDPVEKSDVDSSMTVFVQGFITKIMQDIDGVLHPSGTPSKVVAMAHDGAFQTTATVETTNPADLLDSTDKDMLDAKYWEISMYKTALEGRKGELVDGEVVEERDDDLEIQIGNKLRRDAFLVFRALCKLSMKSPSKEAPADPQSMRGKIVALELLKILLENAGAVFRTSERFLGAIKQYLCLSLLKNSASTLMIVFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLEKLCLDSQILVDIFINYDCDVNSSNIFERMVNGLLKTAQGVPPGVTTTVLPPQEATLKLEAMKCLVAVLKSMGDWMNKQMRIPDPHSGKKIEAVDNGHEPGDFPMANGNGEDPVEGSDTHSEISNEASDVSNIEQRRAYKLELQEGISLFNRKPKKGIEFLINAHKVGNSPEDIAAFLKDASGLNKTLIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRMFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSPEDFIKNNRGIDDGKDIPEEYLRSLFERISRNEIKMKDVDLEHQQVQAVNPNRLLGLDSILNIVVRKRGEDSHMGTSDDLIRRMQEEFREKARKTESVYYAATDVVILRFMIEVCWAPMLAAFSVPLDQSDDEIVIALCLEGFRYAIHVTSVMSMKTHRDAYVTSLAKFTSLHSPADIKQKNVDAIKAIVTIADEDGNYLQEAWEHILTCVSRFEHLHLLGEGAPPDATFFAFPQNDSEKVKQTKTTILPVLKKKGPGRMQYAATTLMRGSYDSAGIGSNAAGAITSEQVNSLVSNLNMLEQVGSSEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSGNLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSSAVEIRELIIRCVSQMVLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIRDYFPYITETETTTFTDCVNCLIAFTNSRFNKEISLNAITFLRFCATKLAEGDLGSSSRNKGKETSGKISTASPRTGKEGRQDNGEVMDKDDHLYFWFPLLAGLSELSFDPRSEIRQSALQVLFETLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGNSAQVNEVETDGELDQDAWLYETCTLALQLVVDLFINFYSTVNPLLKKVLMLLISFIKRPHQSLAGIGIAAFVRLMSNAGELFSDEKWLEVVLSLKDAANATLPDFSFLDGGDFVTRNDQHTSKAEDDRDPAESSSHDNAESPRTDRLYAYLSDAKCRAAVQLLLIQAVMEIYNIYRTQLSAKAMLVLFDAMRNVASHAHKINSNTILRSKLQEFGSMTQMQDPPLLRLENESYQICITFLQNLVVDKPPSYEEVEVETHLVQLCQEVLGFYIEVAGSGQVSESSHGRQQHWLIPLGSGKRRELAARAPLIVTTLQTISNLGDSSFEKNLVHFFPLLSSLISCEHGSTEVQVALSDMLSLSVGPLLLRSC*