AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0388210

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0388210 MtrunA17_Chr3g0139471 93.887 867 26 2 1 863 1 844 0.0 1655
Msa0388210 MtrunA17_Chr4g0038901 32.561 734 409 16 18 741 12 669 1.07e-102 339
Msa0388210 MtrunA17_Chr5g0435291 26.415 212 142 2 42 253 46 243 3.98e-17 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0388210 AT5G11490.1 76.185 865 180 4 1 863 1 841 0.0 1342
Msa0388210 AT5G11490.2 76.218 862 179 4 1 860 1 838 0.0 1334
Msa0388210 AT5G11490.3 75.589 807 172 3 56 860 1 784 0.0 1248
Msa0388210 AT4G23460.1 34.880 625 364 12 18 639 12 596 7.26e-104 342
Msa0388210 AT4G11380.1 34.119 636 374 11 18 650 12 605 9.72e-102 337
Msa0388210 AT4G11380.2 34.697 611 361 10 43 650 52 627 5.85e-101 335
Msa0388210 AT4G23460.2 33.521 534 319 11 109 639 2 502 2.78e-79 273
Msa0388210 AT3G55480.2 30.556 144 98 1 45 188 49 190 2.50e-13 74.7
Msa0388210 AT3G55480.2 24.107 448 270 19 275 694 351 756 1.78e-11 68.9
Msa0388210 AT3G55480.1 24.107 448 270 19 275 694 223 628 1.31e-11 69.3

Find 242 sgRNAs with CRISPR-Local

Find 646 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCGGCTTCTGCAGTTTC+TGG 0.097421 3_1:+92570747 Msa0388210:CDS
CAATCAGCTTTGTCCAAATT+TGG 0.125872 3_1:+92574778 Msa0388210:CDS
GAGTATTTGGTTGGGCCTTT+AGG 0.153079 3_1:+92566551 Msa0388210:CDS
TGTCTGCTTTACAAGAAATT+TGG 0.157651 3_1:+92568283 Msa0388210:CDS
AGTATGCACCATTAAGTTTC+AGG 0.189588 3_1:-92574806 None:intergenic
GTTTCAGGGCAAACCAAATT+TGG 0.200113 3_1:-92574791 None:intergenic
ATCAAATGCTTCAACGTTTC+TGG 0.203616 3_1:-92566677 None:intergenic
GATTGCGCCGCGATTAAATT+TGG 0.205518 3_1:+92575131 Msa0388210:three_prime_UTR
AGTCGACAATAATGAAATTT+TGG 0.209614 3_1:+92574841 Msa0388210:three_prime_UTR
TGGAAAGTCTGGTTGAAAAT+TGG 0.212595 3_1:+92571133 Msa0388210:CDS
CTGCCTTAGCCTTAGGTTCT+TGG 0.226571 3_1:-92571053 None:intergenic
CCAGGATCCAGTACAGCTTT+TGG 0.231595 3_1:-92574111 None:intergenic
TATAATGCTCCTTCCTATAA+TGG 0.233272 3_1:+92573934 Msa0388210:CDS
CCTGCACTTGACTTTATCTA+TGG 0.262839 3_1:+92569006 Msa0388210:CDS
AGTATTTGGTTGGGCCTTTA+GGG 0.273406 3_1:+92566552 Msa0388210:CDS
TTCACAACCGCTTGCAGATT+TGG 0.280848 3_1:+92573975 Msa0388210:CDS
TGGTTTGCCCTGAAACTTAA+TGG 0.282228 3_1:+92574798 Msa0388210:exon
TTGGTTGGGCCTTTAGGGTC+AGG 0.291482 3_1:+92566557 Msa0388210:CDS
CTCTGAGGTGGTTGACTCTA+AGG 0.294624 3_1:-92568307 None:intergenic
ATTATAGGAAGGAGCATTAT+AGG 0.298629 3_1:-92573932 None:intergenic
CGAATTGATTCCCTTGCAAT+TGG 0.305678 3_1:-92570676 None:intergenic
GTTTGCTACGTGCAGCATTA+AGG 0.317331 3_1:+92568832 Msa0388210:intron
CATATGATGGCTCGTTATAC+TGG 0.328980 3_1:-92570394 None:intergenic
CAAACCTCTGATAAGGATAT+TGG 0.329700 3_1:-92574162 None:intergenic
ATTGATGTTGAAATGTGATT+TGG 0.330843 3_1:+92575160 Msa0388210:three_prime_UTR
GGCGAACTTGGTGGAGTATT+TGG 0.333179 3_1:+92566538 Msa0388210:CDS
CCCAGTGCTTTCTGAGTCTC+GGG 0.337763 3_1:-92572237 None:intergenic
ATTGATGTTTCGTCTCTCTT+TGG 0.342308 3_1:+92566326 Msa0388210:CDS
TAGAAGCCTGTAATAAAATA+AGG 0.343419 3_1:-92572441 None:intergenic
AAAGATGATGTGAGAGATAC+TGG 0.345708 3_1:+92573895 Msa0388210:CDS
AATACGGAAACTGCTTGTTT+TGG 0.348511 3_1:-92572503 None:intergenic
CAAGATTGTATTGCTGTTGT+AGG 0.357677 3_1:+92571009 Msa0388210:CDS
TAAAGAAATGGAGATAGATA+TGG 0.360957 3_1:+92574882 Msa0388210:three_prime_UTR
TTACAGCTACGGCAGCTTGC+TGG 0.364785 3_1:+92566230 Msa0388210:CDS
GGAAAGTCTGGTTGAAAATT+GGG 0.365049 3_1:+92571134 Msa0388210:CDS
TCTTCATCTTCCATCCTTGT+TGG 0.365176 3_1:+92565645 Msa0388210:five_prime_UTR
TGAAGGGGCAGACCCATTAT+AGG 0.369778 3_1:-92573947 None:intergenic
GCCTTTAGGGTCAGGGTTGA+AGG 0.371889 3_1:+92566565 Msa0388210:CDS
TCCCAGTGCTTTCTGAGTCT+CGG 0.372039 3_1:-92572238 None:intergenic
CTAGTTTGGAGATCTTGTGC+TGG 0.385713 3_1:+92565426 None:intergenic
AGAATTGCATAAGATTGTTC+CGG 0.387819 3_1:-92570302 None:intergenic
CAAATTTGGACAAAGCTGAT+TGG 0.388207 3_1:-92574777 None:intergenic
CAATTGCAAGGGAATCAATT+CGG 0.388565 3_1:+92570677 Msa0388210:CDS
CAAGTCACAGATTAAAATAA+AGG 0.389674 3_1:+92574714 Msa0388210:CDS
TGATCCGAGGACTGGCATTA+AGG 0.389716 3_1:+92566495 Msa0388210:CDS
GCTTGCTGGGAGTCGAGCTC+CGG 0.391372 3_1:+92566244 Msa0388210:CDS
AGTCGTAGAAAACATGAGTC+TGG 0.394316 3_1:+92575034 Msa0388210:three_prime_UTR
CCTTCGCCGTCGCAACCGTC+CGG 0.396107 3_1:+92565771 Msa0388210:CDS
TTCAGAAGGTAATAAACAAT+TGG 0.400938 3_1:-92568366 None:intergenic
CTGGGAGCTGCACTGGCCGC+TGG 0.402711 3_1:+92572255 Msa0388210:CDS
TTCTTACATGTTCACTGATA+AGG 0.403515 3_1:+92573741 Msa0388210:CDS
AACTTGGTGGAGTATTTGGT+TGG 0.409463 3_1:+92566542 Msa0388210:CDS
TAGTCCGAGGAAAATATATA+TGG 0.418519 3_1:-92570356 None:intergenic
ATGAGAGCTGCCTTAGCCTT+AGG 0.418866 3_1:-92571060 None:intergenic
CTGGCACATTTCAGCAGAAA+TGG 0.420622 3_1:+92574130 Msa0388210:CDS
GAAAGTAACACCTATGAGAT+AGG 0.421261 3_1:+92570458 Msa0388210:CDS
TCAAAGGGATTGTAAGGATC+AGG 0.422298 3_1:+92566466 Msa0388210:CDS
CGATTAGATTGCGGTGGTGC+AGG 0.423507 3_1:-92565744 None:intergenic
GATTGCAGGATGTTCATGAT+AGG 0.426072 3_1:+92572417 Msa0388210:intron
TTGTTTATTACCTTCTGAAT+CGG 0.426616 3_1:+92568370 Msa0388210:CDS
GAAAGCACTGGGAGCTGCAC+TGG 0.427199 3_1:+92572248 Msa0388210:CDS
ATAATGCTCCTTCCTATAAT+GGG 0.428702 3_1:+92573935 Msa0388210:CDS
GTCAGGACGGTGGCAGTAAT+CGG 0.429251 3_1:+92566602 Msa0388210:CDS
CATGCTGTAGTCTATCTTCA+AGG 0.433221 3_1:-92568946 None:intergenic
CTATGTTACGTCTGAAGCTC+TGG 0.434441 3_1:+92570783 Msa0388210:CDS
GGCAGCTCTCATATGGATGC+TGG 0.436064 3_1:+92571071 Msa0388210:CDS
TAGTTTGGAGATCTTGTGCT+GGG 0.441008 3_1:+92565427 None:intergenic
GTGATATCAAACATGACTAT+AGG 0.444966 3_1:+92566302 Msa0388210:CDS
TGGTTGGGCCTTTAGGGTCA+GGG 0.446084 3_1:+92566558 Msa0388210:CDS
CCTCAACCCAAAAGCTGTAC+TGG 0.447071 3_1:+92574104 Msa0388210:CDS
AGGCTAAGGCAGCTCTCATA+TGG 0.449590 3_1:+92571064 Msa0388210:CDS
GCAGTTTCTGGAGATGGAAA+AGG 0.450968 3_1:+92570759 Msa0388210:CDS
CAAGCGATTATTGTGTTCTA+CGG 0.451804 3_1:+92575104 Msa0388210:three_prime_UTR
GGAAGATGAAGATCGATAGT+TGG 0.452818 3_1:-92565634 None:intergenic
TGCATCATTAGATATAGAAA+AGG 0.453336 3_1:-92575185 None:intergenic
CTGTCTATTAGTGCGGAATC+CGG 0.457717 3_1:+92573805 Msa0388210:CDS
TCCGTATGTCTTGGAAAGTC+TGG 0.465126 3_1:+92571122 Msa0388210:CDS
TACAGCTACGGCAGCTTGCT+GGG 0.465832 3_1:+92566231 Msa0388210:CDS
TTGACTTGCAAACGCTCCTC+GGG 0.466257 3_1:-92565703 None:intergenic
TTCGTCTCTCTTTGGTGAGA+TGG 0.466707 3_1:+92566334 Msa0388210:CDS
AGAATGCCTGTGATGAGCTT+TGG 0.467508 3_1:-92574744 None:intergenic
CGCAGGAACAACAGAATCTC+CGG 0.469614 3_1:-92573824 None:intergenic
TGCATTGTTATACACTGATC+TGG 0.469741 3_1:-92574937 None:intergenic
TTCAAAGCAAACCTCTGATA+AGG 0.470543 3_1:-92574169 None:intergenic
AGGGAATCAATTCGGGCTGT+TGG 0.471812 3_1:+92570685 Msa0388210:CDS
TCAAGTGAGCTCAGGAAGTC+CGG 0.472287 3_1:+92570283 Msa0388210:CDS
CAATGCTTGGCTAGTCGTGC+TGG 0.472618 3_1:-92574010 None:intergenic
TATTATTACATCTGCAGATA+CGG 0.474405 3_1:-92565513 None:intergenic
CTTCGCCGTCGCAACCGTCC+GGG 0.475178 3_1:+92565772 Msa0388210:CDS
ACTTGGTGGAGTATTTGGTT+GGG 0.475411 3_1:+92566543 Msa0388210:CDS
GTATGCACCATTAAGTTTCA+GGG 0.476554 3_1:-92574805 None:intergenic
TTCTAAGAAAATATCCTCAA+TGG 0.478818 3_1:+92570983 Msa0388210:CDS
GAATTGATTCCCTTGCAATT+GGG 0.478912 3_1:-92570675 None:intergenic
ACAATGCGATTAGATATTTG+TGG 0.480680 3_1:+92572338 Msa0388210:CDS
TAGCATAGTTTCCAACATAC+AGG 0.481690 3_1:-92566403 None:intergenic
CTCTTAACTCAAGTGAGCTC+AGG 0.486123 3_1:+92570275 Msa0388210:CDS
GCTTCTGCAGTTTCTGGAGA+TGG 0.486335 3_1:+92570753 Msa0388210:CDS
CATTAAGGAATTTAGTGAAT+GGG 0.486684 3_1:+92568847 Msa0388210:CDS
AAACTATGCTAAGGTTAATC+CGG 0.489948 3_1:+92566415 Msa0388210:CDS
CATCTAATGAATCACGATGT+TGG 0.490830 3_1:-92575005 None:intergenic
GGTTTGAATATATAAAGAAA+TGG 0.490832 3_1:+92574870 Msa0388210:three_prime_UTR
GCTCTGAGTATCAGCAAATA+CGG 0.491058 3_1:-92572519 None:intergenic
TTCACTTCGAGTGGCGAACT+TGG 0.491152 3_1:+92566526 Msa0388210:CDS
TCAATACAGTGCATTGCATC+CGG 0.492293 3_1:+92574595 Msa0388210:CDS
CACCTCAGAGGAAGCAGCTA+GGG 0.493233 3_1:+92568320 Msa0388210:CDS
AAGTCAACTTCCAGTGGCTA+TGG 0.495420 3_1:+92565719 Msa0388210:exon
CTTGCTGGGAGTCGAGCTCC+GGG 0.495428 3_1:+92566245 Msa0388210:CDS
TTTGTCTGTTGTATACCAAA+AGG 0.496811 3_1:+92572580 Msa0388210:CDS
TCTAAGCCACCTGCATCTCT+TGG 0.497035 3_1:+92570322 Msa0388210:CDS
AATATTTCACTGTTATCTGA+TGG 0.500382 3_1:-92568908 None:intergenic
GAGTTACTTACCTATCTCAT+AGG 0.500850 3_1:-92570468 None:intergenic
GTCAATGATGCAATTGCAAG+AGG 0.504606 3_1:-92574535 None:intergenic
GCATTAAGGAATTTAGTGAA+TGG 0.506177 3_1:+92568846 Msa0388210:intron
CCAAAAGCTGTACTGGATCC+TGG 0.506654 3_1:+92574111 Msa0388210:CDS
GCAGCTCTCATATGGATGCT+GGG 0.507243 3_1:+92571072 Msa0388210:CDS
GTTGACTTGCAAACGCTCCT+CGG 0.507820 3_1:-92565704 None:intergenic
AAAGAAATGGAGATAGATAT+GGG 0.512122 3_1:+92574883 Msa0388210:three_prime_UTR
AAGATTGTATTGCTGTTGTA+GGG 0.514619 3_1:+92571010 Msa0388210:CDS
ACTTCGAGTGGCGAACTTGG+TGG 0.516354 3_1:+92566529 Msa0388210:CDS
AATTGCAAGGGAATCAATTC+GGG 0.518278 3_1:+92570678 Msa0388210:CDS
AATGAATCACGATGTTGGAT+TGG 0.521399 3_1:-92575000 None:intergenic
TATGGCTGATGTACATCAGC+AGG 0.521975 3_1:+92569024 Msa0388210:CDS
ATCGTCAAAAGAGCAAGATC+CGG 0.522124 3_1:-92566434 None:intergenic
GGTGCAGGAGCCATAGCCAC+TGG 0.522250 3_1:-92565729 None:intergenic
AGATCAGTGTATAACAATGC+AGG 0.522278 3_1:+92574939 Msa0388210:three_prime_UTR
TGCAAATGGTGCTGTTGTCT+TGG 0.522927 3_1:+92568967 Msa0388210:CDS
GATCATCAATTGCCAATGCT+TGG 0.526886 3_1:-92574023 None:intergenic
AGAACTTGAAATTAGGAGAC+TGG 0.528548 3_1:-92574621 None:intergenic
TCCTTCAACCCTGACCCTAA+AGG 0.529512 3_1:-92566566 None:intergenic
GATAGACTACAGCATGCAAA+TGG 0.530107 3_1:+92568953 Msa0388210:CDS
GTTTGGAGATCTTGTGCTGG+GGG 0.532239 3_1:+92565429 None:intergenic
AGGATAATAATAGTTATGTC+AGG 0.535717 3_1:+92566585 Msa0388210:CDS
CCCCGAGACTCAGAAAGCAC+TGG 0.536714 3_1:+92572236 Msa0388210:CDS
GATCTCACTTTCTTCAAAGA+CGG 0.537593 3_1:+92565671 Msa0388210:five_prime_UTR
TGTTGTTCCTGCGCAGAGAG+TGG 0.538852 3_1:+92573834 Msa0388210:CDS
ATTGCAGGATGTTCATGATA+GGG 0.541499 3_1:+92572418 Msa0388210:intron
AACTCCTTAATGCCAGTCCT+CGG 0.542152 3_1:-92566499 None:intergenic
CAACAATGTCCAAGAACCTA+AGG 0.542710 3_1:+92571044 Msa0388210:CDS
CATTTCTGCTGAAATGTGCC+AGG 0.542817 3_1:-92574129 None:intergenic
CTCTTAGAGTCATCAGTACC+CGG 0.546509 3_1:-92566263 None:intergenic
CCACCTCAGAGGAAGCAGCT+AGG 0.546816 3_1:+92568319 Msa0388210:CDS
GGATCCGATGATCCGAGGAC+TGG 0.547606 3_1:+92566487 Msa0388210:CDS
AAAATGTGTTACCTGTATGT+TGG 0.548280 3_1:+92566392 Msa0388210:CDS
AATGCCAGTCCTCGGATCAT+CGG 0.548429 3_1:-92566491 None:intergenic
GCGGTTGTGAAGCTGCTGAA+GGG 0.548854 3_1:-92573963 None:intergenic
CTGATCTAAAATTACAGCTA+CGG 0.550000 3_1:+92566219 Msa0388210:CDS
CAATCCTTACCTGAGTATCC+TGG 0.550303 3_1:-92566709 None:intergenic
ACCAGACTTTCCAAGACATA+CGG 0.552347 3_1:-92571123 None:intergenic
ACAATGTCTTGTGATGGAAT+TGG 0.555303 3_1:+92568871 Msa0388210:CDS
GCATCATTAGATATAGAAAA+GGG 0.556114 3_1:-92575184 None:intergenic
ATGTGCCGTAGGAGTGCATT+GGG 0.556487 3_1:-92574562 None:intergenic
GTCGTAGAAAACATGAGTCT+GGG 0.557014 3_1:+92575035 Msa0388210:three_prime_UTR
CTGAAAACTCAAATGTCCCT+CGG 0.557020 3_1:-92573768 None:intergenic
CACGCATTACCAAGAGATGC+AGG 0.558649 3_1:-92570331 None:intergenic
TTTGCCTCCACTCTCTGCGC+AGG 0.558741 3_1:-92573841 None:intergenic
CGGGTACTGATGACTCTAAG+AGG 0.560686 3_1:+92566264 Msa0388210:CDS
GAGTTTGTGTTCACTTCGAG+TGG 0.560907 3_1:+92566517 Msa0388210:CDS
CCCGAGACTCAGAAAGCACT+GGG 0.561576 3_1:+92572237 Msa0388210:CDS
GCATTTGATGCTCAATGACC+AGG 0.563623 3_1:+92566691 Msa0388210:CDS
CCATAGATAAAGTCAAGTGC+AGG 0.564762 3_1:-92569006 None:intergenic
TTTCTATATCTAATGATGCA+AGG 0.566737 3_1:+92575188 Msa0388210:three_prime_UTR
GAAAAGATTACCGATTCAGA+AGG 0.567189 3_1:-92568380 None:intergenic
TTGGCAATTGATGATCTGCT+TGG 0.567360 3_1:+92574030 Msa0388210:CDS
AGCTCACTTGAGTTAAGAGA+GGG 0.567475 3_1:-92570271 None:intergenic
TGTCCAAGAACCTAAGGCTA+AGG 0.572102 3_1:+92571050 Msa0388210:CDS
GCTCAATGACCAGGATACTC+AGG 0.572468 3_1:+92566700 Msa0388210:CDS
CGGTTGTGAAGCTGCTGAAG+GGG 0.573044 3_1:-92573962 None:intergenic
CATGTGCCGTAGGAGTGCAT+TGG 0.574006 3_1:-92574563 None:intergenic
AGCGGTTGTGAAGCTGCTGA+AGG 0.575249 3_1:-92573964 None:intergenic
GCATGATGCTCCGTATGTCT+TGG 0.576281 3_1:+92571113 Msa0388210:CDS
GATCAGTGTATAACAATGCA+GGG 0.576540 3_1:+92574940 Msa0388210:three_prime_UTR
TTTGGGTTGAGGGTCAACGG+GGG 0.576858 3_1:-92574093 None:intergenic
CTCCCTAGCTGCTTCCTCTG+AGG 0.578498 3_1:-92568322 None:intergenic
TTATCAGTGAACATGTAAGA+AGG 0.579603 3_1:-92573739 None:intergenic
CAGCTCTCATATGGATGCTG+GGG 0.579778 3_1:+92571073 Msa0388210:CDS
AGTTTGGAGATCTTGTGCTG+GGG 0.581598 3_1:+92565428 None:intergenic
GTTATCTGATGGAATGTACT+TGG 0.582108 3_1:-92568897 None:intergenic
ATGTTGACATCCCAATTGCA+AGG 0.584452 3_1:+92570665 Msa0388210:CDS
CCTAGCTGCTTCCTCTGAGG+TGG 0.585891 3_1:-92568319 None:intergenic
TGAGATCTAACCAACAAGGA+TGG 0.586243 3_1:-92565655 None:intergenic
ATGTCAATGCTATTGTTGAT+CGG 0.587080 3_1:+92570731 Msa0388210:CDS
TGATGACCAAAGCTCATCAC+AGG 0.588639 3_1:+92574738 Msa0388210:CDS
GTATGTTGGAAACTATGCTA+AGG 0.594327 3_1:+92566406 Msa0388210:CDS
ACGGACCCGGACGGTTGCGA+CGG 0.594447 3_1:-92565777 None:intergenic
TAAGAGGGATCTTTACAAGA+AGG 0.601150 3_1:+92566280 Msa0388210:CDS
ATGTCTTGTGATGGAATTGG+TGG 0.601765 3_1:+92568874 Msa0388210:CDS
CAGCACGACTAGCCAAGCAT+TGG 0.603702 3_1:+92574011 Msa0388210:CDS
TTTCTTTATATATTCAAACC+AGG 0.605607 3_1:-92574867 None:intergenic
CCGGACGGTTGCGACGGCGA+AGG 0.610990 3_1:-92565771 None:intergenic
CCAGTGCTTTCTGAGTCTCG+GGG 0.613244 3_1:-92572236 None:intergenic
AGTAAATAACAACTCAAACC+TGG 0.614815 3_1:-92572293 None:intergenic
GAAATTAGGAGACTGGCCGC+CGG 0.615981 3_1:-92574614 None:intergenic
CGACGTAGTAGAAGCTGACG+TGG 0.618811 3_1:-92565487 None:intergenic
TCTGGGTTGCAAGTGTGTAG+AGG 0.619217 3_1:+92575052 Msa0388210:three_prime_UTR
ATGGGCACAATGTCTTGTGA+TGG 0.620096 3_1:+92568865 Msa0388210:CDS
ACTACCAATATCCTTATCAG+AGG 0.623846 3_1:+92574158 Msa0388210:CDS
TTTGGAGATCTTGTGCTGGG+GGG 0.624285 3_1:+92565430 None:intergenic
AATGACTTTGCATGTGCCGT+AGG 0.625693 3_1:-92574573 None:intergenic
TGTTGACATCCCAATTGCAA+GGG 0.626270 3_1:+92570666 Msa0388210:CDS
CGACTCCCAATGCACTCCTA+CGG 0.627621 3_1:+92574557 Msa0388210:CDS
GTGAGAGATACTGGAAGCAA+TGG 0.629878 3_1:+92573904 Msa0388210:CDS
GAGCTCACTTGAGTTAAGAG+AGG 0.630893 3_1:-92570272 None:intergenic
GAAAATGCCAAATCTGCAAG+CGG 0.631748 3_1:-92573982 None:intergenic
CGCCGCGATTAAATTTGGTG+CGG 0.631903 3_1:+92575136 Msa0388210:three_prime_UTR
GCTTCTACAACACAATGTAT+CGG 0.632864 3_1:+92572457 Msa0388210:CDS
GGGTACTGATGACTCTAAGA+GGG 0.633805 3_1:+92566265 Msa0388210:CDS
GAGAGTGGAGGCAAATGACA+AGG 0.634383 3_1:+92573849 Msa0388210:CDS
ATCTGCATCAATACACGTGG+AGG 0.639042 3_1:-92566651 None:intergenic
GGGGCAGACCCATTATAGGA+AGG 0.639597 3_1:-92573943 None:intergenic
AAGACGGCGCGAATTTCCCG+AGG 0.640158 3_1:+92565687 Msa0388210:five_prime_UTR
ATACAATCTTGACTCCATTG+AGG 0.643764 3_1:-92570997 None:intergenic
ATAGAAGTGTTTGTAGTCCG+AGG 0.645673 3_1:-92570369 None:intergenic
ATCAGTGTATAACAATGCAG+GGG 0.646791 3_1:+92574941 Msa0388210:three_prime_UTR
TTCCGCACCAAATTTAATCG+CGG 0.646800 3_1:-92575138 None:intergenic
TGTTCCTGCGCAGAGAGTGG+AGG 0.648267 3_1:+92573837 Msa0388210:CDS
GATCAGGATCCGATGATCCG+AGG 0.649993 3_1:+92566482 Msa0388210:CDS
TCAATGATGCAATTGCAAGA+GGG 0.655935 3_1:-92574534 None:intergenic
GGAGATCGATTAGATTGCGG+TGG 0.656896 3_1:-92565750 None:intergenic
AGTGAGGGAACGGACCCGGA+CGG 0.658380 3_1:-92565786 None:intergenic
GTGAAAATCAGCAAGACCAG+CGG 0.660650 3_1:-92572271 None:intergenic
TAATAATAGTTATGTCAGGA+CGG 0.660766 3_1:+92566589 Msa0388210:CDS
TGTATCGGTGGCTGAGAGTG+TGG 0.662667 3_1:+92572472 Msa0388210:CDS
TGGCAATCTGTCTATTAGTG+CGG 0.662854 3_1:+92573798 Msa0388210:CDS
GTTTGCAAGTCAACTTCCAG+TGG 0.667172 3_1:+92565713 Msa0388210:five_prime_UTR
TCTACAACACAATGTATCGG+TGG 0.672727 3_1:+92572460 Msa0388210:CDS
TCTGGTTGAAAATTGGGACG+AGG 0.674693 3_1:+92571140 Msa0388210:CDS
ATACAGTGCATTGCATCCGG+CGG 0.681832 3_1:+92574598 Msa0388210:CDS
AAAATCTGCATCAATACACG+TGG 0.682353 3_1:-92566654 None:intergenic
GGACGAGGAGCATTCTGCCG+AGG 0.683462 3_1:+92571155 Msa0388210:CDS
CTTAGAGTCAACCACCTCAG+AGG 0.685984 3_1:+92568308 Msa0388210:CDS
GAAGGAGATCGATTAGATTG+CGG 0.687354 3_1:-92565753 None:intergenic
CAGTGCTTTCTGAGTCTCGG+GGG 0.688708 3_1:-92572235 None:intergenic
CTAATGATGCAAGGTGCCTG+CGG 0.693479 3_1:+92575197 Msa0388210:three_prime_UTR
TCAGTGTATAACAATGCAGG+GGG 0.695855 3_1:+92574942 Msa0388210:three_prime_UTR
AGCTCTCATATGGATGCTGG+GGG 0.703952 3_1:+92571074 Msa0388210:CDS
AAAGTGAGATCTAACCAACA+AGG 0.705125 3_1:-92565659 None:intergenic
GGATCTGCTTCTAAGTACCA+CGG 0.710539 3_1:+92573870 Msa0388210:CDS
TAATAGTTATGTCAGGACGG+TGG 0.728993 3_1:+92566592 Msa0388210:CDS
GCATTACCAAGAGATGCAGG+TGG 0.740701 3_1:-92570328 None:intergenic
TCACTGATAAGGAACACCGA+GGG 0.741366 3_1:+92573752 Msa0388210:CDS
GCTCACTTGAGTTAAGAGAG+GGG 0.755910 3_1:-92570270 None:intergenic
TTCACTGATAAGGAACACCG+AGG 0.759479 3_1:+92573751 Msa0388210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTGTATCTTTTTTTTA+CGG - chr3_1:92567940-92567959 None:intergenic 10.0%
!!! TATGACAATATTTTATATTT+AGG + chr3_1:92572896-92572915 Msa0388210:intron 10.0%
!!! TTACATTATTTATAGTTTTT+CGG + chr3_1:92573025-92573044 Msa0388210:intron 10.0%
!! AAAAATATCTAATTTGAAAA+TGG - chr3_1:92573129-92573148 None:intergenic 10.0%
!! TAAAAATGAATGTAAATTGA+GGG + chr3_1:92566895-92566914 Msa0388210:intron 15.0%
!!! TTTTTTTCCTTAACATTATT+TGG + chr3_1:92567771-92567790 Msa0388210:intron 15.0%
!!! ATATTGTATCTTTTTTTTAC+GGG - chr3_1:92567939-92567958 None:intergenic 15.0%
!!! GTGCAAAATAATTTTAAAAT+GGG - chr3_1:92568506-92568525 None:intergenic 15.0%
!! AATTATAAATCAGTTATTCT+AGG + chr3_1:92568611-92568630 Msa0388210:intron 15.0%
!! ATAAACAAAATAAGCAATTA+AGG - chr3_1:92568707-92568726 None:intergenic 15.0%
!!! ATAATTTTTCAACAACTTAT+TGG + chr3_1:92568801-92568820 Msa0388210:intron 15.0%
!!! TTATTGATAACTTTTTCATT+TGG + chr3_1:92569600-92569619 Msa0388210:intron 15.0%
!!! TTAATTCTTGTTTTTGTTTA+TGG + chr3_1:92569639-92569658 Msa0388210:intron 15.0%
!!! AATTTTAATGTATAAGTGTA+TGG - chr3_1:92569947-92569966 None:intergenic 15.0%
!! TATATCATATGTGAATATTA+GGG + chr3_1:92570002-92570021 Msa0388210:intron 15.0%
!! ATTCATATGATTTCAATTAA+CGG - chr3_1:92571288-92571307 None:intergenic 15.0%
!! ACAAAACAAAACAAAAAAAT+TGG - chr3_1:92572793-92572812 None:intergenic 15.0%
!!! TGAACCTTTTTATTTATTTT+TGG + chr3_1:92573405-92573424 Msa0388210:intron 15.0%
!! TTCACCAAAAATAAATAAAA+AGG - chr3_1:92573412-92573431 None:intergenic 15.0%
!!! AATAATTATTTAGAATGTCA+AGG - chr3_1:92573470-92573489 None:intergenic 15.0%
!! AAATATCAATAATAAAAGCA+AGG - chr3_1:92573623-92573642 None:intergenic 15.0%
!! TAAATTTAATAATATGATGC+AGG + chr3_1:92574498-92574517 Msa0388210:intron 15.0%
!! TATGATCTACAAATTCAATT+TGG + chr3_1:92565839-92565858 Msa0388210:intron 20.0%
!! GATAATTGTGATATCAATAA+TGG - chr3_1:92566101-92566120 None:intergenic 20.0%
!! ACAATTATCTTATGTTAATG+TGG + chr3_1:92566112-92566131 Msa0388210:intron 20.0%
!! GTCTAATGATTTATGTAAAT+CGG + chr3_1:92566836-92566855 Msa0388210:intron 20.0%
!! GTAAAAATGAATGTAAATTG+AGG + chr3_1:92566894-92566913 Msa0388210:intron 20.0%
!! ATTTGTAAAAAAGTTAGTAC+TGG + chr3_1:92567117-92567136 Msa0388210:intron 20.0%
!!! AAAGAGATAATATTTTATGC+TGG + chr3_1:92567198-92567217 Msa0388210:intron 20.0%
!!! ATTTTATGCTGGAAAATAAA+AGG + chr3_1:92567209-92567228 Msa0388210:intron 20.0%
!!! TTTTATGCTGGAAAATAAAA+GGG + chr3_1:92567210-92567229 Msa0388210:intron 20.0%
!! AATGTATAGTTAACGTAAAT+CGG + chr3_1:92567494-92567513 Msa0388210:intron 20.0%
!!! TGGATATTACATTTATGTTT+TGG + chr3_1:92567563-92567582 Msa0388210:intron 20.0%
!! TTGTACTCTATACTATAAAT+TGG + chr3_1:92567735-92567754 Msa0388210:intron 20.0%
!!! AAAAGGAACATTCATTTTTA+AGG - chr3_1:92568113-92568132 None:intergenic 20.0%
!!! GGTGCAAAATAATTTTAAAA+TGG - chr3_1:92568507-92568526 None:intergenic 20.0%
!! ATTTATCAATACAGAATCTA+CGG - chr3_1:92569501-92569520 None:intergenic 20.0%
!! AAGAATTAAAAACACAGAAA+TGG - chr3_1:92569628-92569647 None:intergenic 20.0%
!! GTATATCATATGTGAATATT+AGG + chr3_1:92570001-92570020 Msa0388210:intron 20.0%
!! TATTTAACCATATTTGCATA+AGG + chr3_1:92570083-92570102 Msa0388210:intron 20.0%
!! ATGAACATGATAGTTTAAAT+AGG - chr3_1:92570130-92570149 None:intergenic 20.0%
!!! ATGCAACTTATTTTTGTTTA+AGG + chr3_1:92570229-92570248 Msa0388210:intron 20.0%
!!! GATTTAAATTTCTGCATTTT+AGG + chr3_1:92571230-92571249 Msa0388210:intron 20.0%
!!! AATTAACGGCTTAAATTTTT+GGG - chr3_1:92571274-92571293 None:intergenic 20.0%
!! GTTAATTGAAATCATATGAA+TGG + chr3_1:92571287-92571306 Msa0388210:intron 20.0%
!!! TTTTATATTATACCTCTAAC+CGG + chr3_1:92571310-92571329 Msa0388210:intron 20.0%
!!! TATGATTTTGAAATTTGAAG+AGG + chr3_1:92571596-92571615 Msa0388210:intron 20.0%
!!! ATGATTTTGAAATTTGAAGA+GGG + chr3_1:92571597-92571616 Msa0388210:intron 20.0%
!! TTATTCTTCTACAACATTAA+AGG + chr3_1:92572963-92572982 Msa0388210:intron 20.0%
!!! ATTATTTATAGTTTTTCGGT+AGG + chr3_1:92573029-92573048 Msa0388210:intron 20.0%
!!! TTTTTTTGTAATCAAACAGA+TGG + chr3_1:92573077-92573096 Msa0388210:intron 20.0%
!! CTTCATGTAAATTGATATAA+CGG + chr3_1:92573289-92573308 Msa0388210:intron 20.0%
!! AGAATATAATATAGAAGAGA+GGG - chr3_1:92573690-92573709 None:intergenic 20.0%
!! ATAATATGACAACACATTAA+TGG + chr3_1:92574320-92574339 Msa0388210:intron 20.0%
!! AAGAAAAAGAACTTGAAATT+AGG - chr3_1:92574631-92574650 None:intergenic 20.0%
!! TTTCTTTATATATTCAAACC+AGG - chr3_1:92574870-92574889 None:intergenic 20.0%
!! GGTTTGAATATATAAAGAAA+TGG + chr3_1:92574870-92574889 Msa0388210:three_prime_UTR 20.0%
! TATTATTACATCTGCAGATA+CGG - chr3_1:92565516-92565535 None:intergenic 25.0%
!!! CTCACTTTTTTCATCAAAAA+TGG - chr3_1:92565580-92565599 None:intergenic 25.0%
! TCGTGAAAGTTAAAATTCAA+CGG - chr3_1:92566018-92566037 None:intergenic 25.0%
! ATTATCTTATGTTAATGTGG+TGG + chr3_1:92566115-92566134 Msa0388210:intron 25.0%
! CCTGGTTAAAATTAAATGTT+AGG - chr3_1:92566186-92566205 None:intergenic 25.0%
!!! CCTAACATTTAATTTTAACC+AGG + chr3_1:92566183-92566202 Msa0388210:intron 25.0%
!! TGACGATTAATTTTCTTCAA+AGG + chr3_1:92566450-92566469 Msa0388210:CDS 25.0%
!! GACGATTAATTTTCTTCAAA+GGG + chr3_1:92566451-92566470 Msa0388210:CDS 25.0%
! AGGATAATAATAGTTATGTC+AGG + chr3_1:92566585-92566604 Msa0388210:CDS 25.0%
! TAATAATAGTTATGTCAGGA+CGG + chr3_1:92566589-92566608 Msa0388210:CDS 25.0%
! TTTATCATATGCTGATGATT+AGG - chr3_1:92566749-92566768 None:intergenic 25.0%
!!! TTTTTTACTGGAAAGAGAAA+AGG + chr3_1:92566872-92566891 Msa0388210:intron 25.0%
!!! TTAGGAGCTATTACATTTTT+TGG + chr3_1:92566928-92566947 Msa0388210:intron 25.0%
!!! TAGGAGCTATTACATTTTTT+GGG + chr3_1:92566929-92566948 Msa0388210:intron 25.0%
!!! AAAAGGGTATTTTGATATTC+TGG + chr3_1:92567226-92567245 Msa0388210:intron 25.0%
!!! TTTGATTTGCTAAAAAACAG+GGG - chr3_1:92567404-92567423 None:intergenic 25.0%
!!! GTTTGATTTGCTAAAAAACA+GGG - chr3_1:92567405-92567424 None:intergenic 25.0%
!!! TTCACAAAGTTGATGATTAA+GGG - chr3_1:92567431-92567450 None:intergenic 25.0%
! GATTTACGTTAACTATACAT+TGG - chr3_1:92567495-92567514 None:intergenic 25.0%
! GATCATACTATAACATAAAC+TGG - chr3_1:92567658-92567677 None:intergenic 25.0%
! TAGTATAGAGTACAAATAGA+TGG - chr3_1:92567730-92567749 None:intergenic 25.0%
!!! ATATTGCTACTTTAGGATTA+AGG - chr3_1:92567911-92567930 None:intergenic 25.0%
!!! CATTTTTAAGGAACCTAAAA+AGG - chr3_1:92568101-92568120 None:intergenic 25.0%
! GCAATAGAAAGAACAAAAAA+AGG - chr3_1:92568130-92568149 None:intergenic 25.0%
!! TTGTTGTTCACATATATATC+AGG + chr3_1:92568157-92568176 Msa0388210:intron 25.0%
! TTCAGAAGGTAATAAACAAT+TGG - chr3_1:92568369-92568388 None:intergenic 25.0%
! TTGTTTATTACCTTCTGAAT+CGG + chr3_1:92568370-92568389 Msa0388210:CDS 25.0%
! TGTCAAAATGAGAAATAGAA+CGG - chr3_1:92568528-92568547 None:intergenic 25.0%
! CTGATTTATAATTGTATGCA+AGG - chr3_1:92568604-92568623 None:intergenic 25.0%
! TATTCTAGGTAATATGATTG+TGG + chr3_1:92568625-92568644 Msa0388210:intron 25.0%
! ATTCTAGGTAATATGATTGT+GGG + chr3_1:92568626-92568645 Msa0388210:intron 25.0%
! ATAAAATGTCTTTCTCATTG+TGG + chr3_1:92568735-92568754 Msa0388210:intron 25.0%
! CATTAAGGAATTTAGTGAAT+GGG + chr3_1:92568847-92568866 Msa0388210:CDS 25.0%
! AATATTTCACTGTTATCTGA+TGG - chr3_1:92568911-92568930 None:intergenic 25.0%
! ACTATGTTGTAAAGAAAAAC+AGG - chr3_1:92569094-92569113 None:intergenic 25.0%
! AACTGAAAAGTAAAGTTGTA+TGG - chr3_1:92569135-92569154 None:intergenic 25.0%
! CTACTAAAAGTAAAGTCATA+TGG - chr3_1:92569168-92569187 None:intergenic 25.0%
! CTGGTTTAGTATATTTAACT+AGG + chr3_1:92569544-92569563 Msa0388210:intron 25.0%
! GTATATTTAACTAGGATGAT+TGG + chr3_1:92569552-92569571 Msa0388210:intron 25.0%
! TAAACACTTGTATAAGTGTA+TGG - chr3_1:92569891-92569910 None:intergenic 25.0%
!! TTCAACTTTTTGACATATGA+TGG - chr3_1:92570410-92570429 None:intergenic 25.0%
! CATCAAATTGAAAAATGCAA+TGG - chr3_1:92570543-92570562 None:intergenic 25.0%
!! TGATTAATTCCCTTTCTTTT+TGG + chr3_1:92570578-92570597 Msa0388210:intron 25.0%
! TAAGCATTACCAAAAAGAAA+GGG - chr3_1:92570590-92570609 None:intergenic 25.0%
! ATAAGCATTACCAAAAAGAA+AGG - chr3_1:92570591-92570610 None:intergenic 25.0%
!! TTCTAAGAAAATATCCTCAA+TGG + chr3_1:92570983-92571002 Msa0388210:CDS 25.0%
! AAAAGTTATGTATACTACCT+CGG - chr3_1:92571175-92571194 None:intergenic 25.0%
! AAATTTAAATCGCAAATGTG+TGG - chr3_1:92571221-92571240 None:intergenic 25.0%
!! CAATTAACGGCTTAAATTTT+TGG - chr3_1:92571275-92571294 None:intergenic 25.0%
! TTGTCTTGTAAACTGAATTA+TGG - chr3_1:92571446-92571465 None:intergenic 25.0%
!! TGTTTTACAAGAATTTTGCT+AGG - chr3_1:92571539-92571558 None:intergenic 25.0%
! GTATGCATATTCTCTATTAT+AGG - chr3_1:92572045-92572064 None:intergenic 25.0%
! TAGAAGCCTGTAATAAAATA+AGG - chr3_1:92572444-92572463 None:intergenic 25.0%
!! TCAGTAAATTAGTTACCTTT+TGG - chr3_1:92572598-92572617 None:intergenic 25.0%
!! TTTTAAACTTGAAGCCATTT+CGG + chr3_1:92572642-92572661 Msa0388210:intron 25.0%
! TTAGTGCTTCATAGATAAAA+CGG - chr3_1:92572693-92572712 None:intergenic 25.0%
! ATGAGGGAAAATATGATAAA+CGG + chr3_1:92573316-92573335 Msa0388210:intron 25.0%
! TTAGAATGTCAAGGTTATTA+CGG - chr3_1:92573461-92573480 None:intergenic 25.0%
! CAGAATATAATATAGAAGAG+AGG - chr3_1:92573691-92573710 None:intergenic 25.0%
!!! TTGGTTTAGATTTTTCAGTT+GGG + chr3_1:92574049-92574068 Msa0388210:CDS 25.0%
! TGACTTGAATCAAAATCATT+AGG - chr3_1:92574274-92574293 None:intergenic 25.0%
! GTGCAATTTAAAAATCTCTA+GGG - chr3_1:92574396-92574415 None:intergenic 25.0%
! AGTGCAATTTAAAAATCTCT+AGG - chr3_1:92574397-92574416 None:intergenic 25.0%
!!! CTTTATTTTAATCTGTGACT+TGG - chr3_1:92574716-92574735 None:intergenic 25.0%
! CAAGTCACAGATTAAAATAA+AGG + chr3_1:92574714-92574733 Msa0388210:CDS 25.0%
!! AGTCGACAATAATGAAATTT+TGG + chr3_1:92574841-92574860 Msa0388210:three_prime_UTR 25.0%
!!! ATAATGAAATTTTGGAATCC+TGG + chr3_1:92574849-92574868 Msa0388210:three_prime_UTR 25.0%
! TAAAGAAATGGAGATAGATA+TGG + chr3_1:92574882-92574901 Msa0388210:three_prime_UTR 25.0%
! AAAGAAATGGAGATAGATAT+GGG + chr3_1:92574883-92574902 Msa0388210:three_prime_UTR 25.0%
! ATTGATGTTGAAATGTGATT+TGG + chr3_1:92575160-92575179 Msa0388210:three_prime_UTR 25.0%
! GCATCATTAGATATAGAAAA+GGG - chr3_1:92575187-92575206 None:intergenic 25.0%
! TGCATCATTAGATATAGAAA+AGG - chr3_1:92575188-92575207 None:intergenic 25.0%
! TTTCTATATCTAATGATGCA+AGG + chr3_1:92575188-92575207 Msa0388210:three_prime_UTR 25.0%
CATTCATATACGCAAATTCT+AGG + chr3_1:92565966-92565985 Msa0388210:intron 30.0%
AAGTTAAAATTCAACGGCAT+TGG - chr3_1:92566012-92566031 None:intergenic 30.0%
! CTGATCTAAAATTACAGCTA+CGG + chr3_1:92566219-92566238 Msa0388210:CDS 30.0%
GTGATATCAAACATGACTAT+AGG + chr3_1:92566302-92566321 Msa0388210:CDS 30.0%
AAAATGTGTTACCTGTATGT+TGG + chr3_1:92566392-92566411 Msa0388210:CDS 30.0%
AAACTATGCTAAGGTTAATC+CGG + chr3_1:92566415-92566434 Msa0388210:CDS 30.0%
! TTTTCTTCAAAGGGATTGTA+AGG + chr3_1:92566460-92566479 Msa0388210:CDS 30.0%
! TTAGACTATGTAGATTAGCT+TGG - chr3_1:92566822-92566841 None:intergenic 30.0%
AAATGAATGTAAATTGAGGG+AGG + chr3_1:92566898-92566917 Msa0388210:intron 30.0%
TAGAAGTTACTTCCTTAGTT+GGG + chr3_1:92566966-92566985 Msa0388210:intron 30.0%
AGTACAAGACAAAATAGTAC+AGG + chr3_1:92567147-92567166 Msa0388210:intron 30.0%
! TTTGATTTAGAACAGGTCAT+GGG - chr3_1:92567349-92567368 None:intergenic 30.0%
!! CGTTTGATTTGCTAAAAAAC+AGG - chr3_1:92567406-92567425 None:intergenic 30.0%
!! CTTCACAAAGTTGATGATTA+AGG - chr3_1:92567432-92567451 None:intergenic 30.0%
AAAGGGTAAAAGTAATGTAG+TGG + chr3_1:92567543-92567562 Msa0388210:intron 30.0%
GGATCTATTCTATAAGTGAT+GGG - chr3_1:92567709-92567728 None:intergenic 30.0%
TGGATCTATTCTATAAGTGA+TGG - chr3_1:92567710-92567729 None:intergenic 30.0%
TGCTCATCCAAATAATGTTA+AGG - chr3_1:92567781-92567800 None:intergenic 30.0%
TTGTAAGCAATGCTATTATC+AGG + chr3_1:92567819-92567838 Msa0388210:intron 30.0%
!! GGCTTTAATATTGCTACTTT+AGG - chr3_1:92567918-92567937 None:intergenic 30.0%
! ACCATATCCTTTACCTTTTT+AGG + chr3_1:92568085-92568104 Msa0388210:intron 30.0%
ACCTAAAAAGGTAAAGGATA+TGG - chr3_1:92568089-92568108 None:intergenic 30.0%
TAAGGAACCTAAAAAGGTAA+AGG - chr3_1:92568095-92568114 None:intergenic 30.0%
! ATGATCTTGTTTGTTTCATC+AGG + chr3_1:92568245-92568264 Msa0388210:intron 30.0%
TGTCTGCTTTACAAGAAATT+TGG + chr3_1:92568283-92568302 Msa0388210:CDS 30.0%
TAAAGGAGTTCAATGGATAT+CGG - chr3_1:92568414-92568433 None:intergenic 30.0%
!!! TAATTTTAAAATGGGAACCC+CGG - chr3_1:92568498-92568517 None:intergenic 30.0%
!! AATATGATTGTGGGAGTATT+TGG + chr3_1:92568635-92568654 Msa0388210:intron 30.0%
GCATTAAGGAATTTAGTGAA+TGG + chr3_1:92568846-92568865 Msa0388210:intron 30.0%
TTTGTCATTAAGGTTCTGTA+AGG + chr3_1:92569217-92569236 Msa0388210:intron 30.0%
! GCTAAATTAGTTTCAACCAA+AGG - chr3_1:92569333-92569352 None:intergenic 30.0%
! TAATTTAGCTCAGTTCCTTA+AGG + chr3_1:92569344-92569363 Msa0388210:intron 30.0%
TACTTGCAAATCTAAGTCTA+AGG - chr3_1:92569427-92569446 None:intergenic 30.0%
TTGTTTACTTACCATAGAAG+AGG + chr3_1:92569742-92569761 Msa0388210:intron 30.0%
GATTAAACTGTTAACAACGA+GGG + chr3_1:92570024-92570043 Msa0388210:intron 30.0%
ATTAAACTGTTAACAACGAG+GGG + chr3_1:92570025-92570044 Msa0388210:intron 30.0%
! TGACTGTATCTTTTCATCTT+TGG + chr3_1:92570178-92570197 Msa0388210:intron 30.0%
AGAATTGCATAAGATTGTTC+CGG - chr3_1:92570305-92570324 None:intergenic 30.0%
! TGCACCATATATATTTTCCT+CGG + chr3_1:92570352-92570371 Msa0388210:CDS 30.0%
TAGTCCGAGGAAAATATATA+TGG - chr3_1:92570359-92570378 None:intergenic 30.0%
!! CAATTTGATGTTTTGTTCAC+CGG + chr3_1:92570553-92570572 Msa0388210:intron 30.0%
AGAAAGGGAATTAATCAAAC+CGG - chr3_1:92570575-92570594 None:intergenic 30.0%
ATGTCAATGCTATTGTTGAT+CGG + chr3_1:92570731-92570750 Msa0388210:CDS 30.0%
GTTCGTATATTAACATGAAG+CGG - chr3_1:92570867-92570886 None:intergenic 30.0%
!!! ATATTGTTTTGACCTGGTAA+TGG + chr3_1:92570905-92570924 Msa0388210:intron 30.0%
CATAAAATGAACTTTCGAAC+TGG - chr3_1:92570944-92570963 None:intergenic 30.0%
! TTCGAAAGTTCATTTTATGC+AGG + chr3_1:92570945-92570964 Msa0388210:intron 30.0%
! AAGATTGTATTGCTGTTGTA+GGG + chr3_1:92571010-92571029 Msa0388210:CDS 30.0%
!!! GCTTAAATTTTTGGGATAGT+TGG - chr3_1:92571266-92571285 None:intergenic 30.0%
TCAGTTTACAAGACAAGATA+AGG + chr3_1:92571450-92571469 Msa0388210:intron 30.0%
! GCGATGTTCTAAATAGTTAT+CGG - chr3_1:92571490-92571509 None:intergenic 30.0%
ATTGCGTCTTATATTACAGA+GGG - chr3_1:92571705-92571724 None:intergenic 30.0%
AATTGCGTCTTATATTACAG+AGG - chr3_1:92571706-92571725 None:intergenic 30.0%
TGTAATATAAGACGCAATTG+TGG + chr3_1:92571707-92571726 Msa0388210:intron 30.0%
GAACTTAACACCTAATATCA+AGG - chr3_1:92571739-92571758 None:intergenic 30.0%
ATATTAGGTGTTAAGTTCCA+CGG + chr3_1:92571741-92571760 Msa0388210:intron 30.0%
!! ACTTACTTGCTATGCAATTT+CGG + chr3_1:92571867-92571886 Msa0388210:intron 30.0%
AGTAAATAACAACTCAAACC+TGG - chr3_1:92572296-92572315 None:intergenic 30.0%
ACAATGCGATTAGATATTTG+TGG + chr3_1:92572338-92572357 Msa0388210:CDS 30.0%
!!! ATAGGGCCTTATTTTATTAC+AGG + chr3_1:92572435-92572454 Msa0388210:CDS 30.0%
TTTGTCTGTTGTATACCAAA+AGG + chr3_1:92572580-92572599 Msa0388210:CDS 30.0%
TTTAAACTTGAAGCCATTTC+GGG + chr3_1:92572643-92572662 Msa0388210:intron 30.0%
!!! TGTTTTGATTCAACACACTT+TGG + chr3_1:92572810-92572829 Msa0388210:intron 30.0%
TCTCAGACATATGGTAATAA+TGG + chr3_1:92572838-92572857 Msa0388210:intron 30.0%
TTAAAGGATGATGATCAATG+AGG + chr3_1:92572979-92572998 Msa0388210:intron 30.0%
!! TATAGTTTTTCGGTAGGAAT+TGG + chr3_1:92573035-92573054 Msa0388210:intron 30.0%
ATGTGTTTGTGTGTATGTAT+CGG + chr3_1:92573213-92573232 Msa0388210:intron 30.0%
ATTGATATAACGGCAAAATG+AGG + chr3_1:92573299-92573318 Msa0388210:intron 30.0%
TTGATATAACGGCAAAATGA+GGG + chr3_1:92573300-92573319 Msa0388210:intron 30.0%
TGAGGGAAAATATGATAAAC+GGG + chr3_1:92573317-92573336 Msa0388210:intron 30.0%
!! AAGTCAAGGTTATTTTACAG+GGG - chr3_1:92573370-92573389 None:intergenic 30.0%
!! GAAGTCAAGGTTATTTTACA+GGG - chr3_1:92573371-92573390 None:intergenic 30.0%
!! AGAAGTCAAGGTTATTTTAC+AGG - chr3_1:92573372-92573391 None:intergenic 30.0%
ATAATATAGAAGAGAGGGAA+GGG - chr3_1:92573685-92573704 None:intergenic 30.0%
TATAATATAGAAGAGAGGGA+AGG - chr3_1:92573686-92573705 None:intergenic 30.0%
TTATCAGTGAACATGTAAGA+AGG - chr3_1:92573742-92573761 None:intergenic 30.0%
TTCTTACATGTTCACTGATA+AGG + chr3_1:92573741-92573760 Msa0388210:CDS 30.0%
!! TTTGAGTTTTCAGATGAACT+TGG + chr3_1:92573778-92573797 Msa0388210:CDS 30.0%
!! ATTATAGGAAGGAGCATTAT+AGG - chr3_1:92573935-92573954 None:intergenic 30.0%
TATAATGCTCCTTCCTATAA+TGG + chr3_1:92573934-92573953 Msa0388210:CDS 30.0%
ATAATGCTCCTTCCTATAAT+GGG + chr3_1:92573935-92573954 Msa0388210:CDS 30.0%
!! CTTGGTTTAGATTTTTCAGT+TGG + chr3_1:92574048-92574067 Msa0388210:CDS 30.0%
ATCAAAATCATTAGGTGATG+TGG - chr3_1:92574266-92574285 None:intergenic 30.0%
!! GATCAATTTTGATGCATTGT+TGG - chr3_1:92574374-92574393 None:intergenic 30.0%
!!! CCAATATACTGGACATTTTT+TGG - chr3_1:92574456-92574475 None:intergenic 30.0%
CCAAAAAATGTCCAGTATAT+TGG + chr3_1:92574453-92574472 Msa0388210:intron 30.0%
!!! TATTTTAATCTGTGACTTGG+CGG - chr3_1:92574713-92574732 None:intergenic 30.0%
AAAGTGAGATCTAACCAACA+AGG - chr3_1:92565662-92565681 None:intergenic 35.0%
GATCTCACTTTCTTCAAAGA+CGG + chr3_1:92565671-92565690 Msa0388210:five_prime_UTR 35.0%
TAAGATGAAGAGATGAGTGA+GGG - chr3_1:92565804-92565823 None:intergenic 35.0%
! GTTTGCTAAGATCCAAAAAG+CGG - chr3_1:92565897-92565916 None:intergenic 35.0%
TAAGAGGGATCTTTACAAGA+AGG + chr3_1:92566280-92566299 Msa0388210:CDS 35.0%
ATTGATGTTTCGTCTCTCTT+TGG + chr3_1:92566326-92566345 Msa0388210:CDS 35.0%
TAGCATAGTTTCCAACATAC+AGG - chr3_1:92566406-92566425 None:intergenic 35.0%
GTATGTTGGAAACTATGCTA+AGG + chr3_1:92566406-92566425 Msa0388210:CDS 35.0%
AAAATCTGCATCAATACACG+TGG - chr3_1:92566657-92566676 None:intergenic 35.0%
ATCAAATGCTTCAACGTTTC+TGG - chr3_1:92566680-92566699 None:intergenic 35.0%
! AGGTAAGGATTGTGCTTTTA+TGG + chr3_1:92566720-92566739 Msa0388210:intron 35.0%
!! GTAGATTAGCTTGGTTCTAT+AGG - chr3_1:92566813-92566832 None:intergenic 35.0%
! TATGTAAATCGGTTTCTTCG+AGG + chr3_1:92566847-92566866 Msa0388210:intron 35.0%
!!! TTCTTCGAGGAGTTTTTTAC+TGG + chr3_1:92566860-92566879 Msa0388210:intron 35.0%
CTAGAAGTTACTTCCTTAGT+TGG + chr3_1:92566965-92566984 Msa0388210:intron 35.0%
TTACTTCCTTAGTTGGGAAA+TGG + chr3_1:92566972-92566991 Msa0388210:intron 35.0%
CTCGAATGTAAAATGAAGTG+TGG - chr3_1:92567027-92567046 None:intergenic 35.0%
AGGACAAGACAAAACTATAC+TGG + chr3_1:92567167-92567186 Msa0388210:intron 35.0%
!!! TGTCTCATGGTTTTTTAGAG+AGG + chr3_1:92567273-92567292 Msa0388210:intron 35.0%
!!! GTCTCATGGTTTTTTAGAGA+GGG + chr3_1:92567274-92567293 Msa0388210:intron 35.0%
! GTTTGATTTAGAACAGGTCA+TGG - chr3_1:92567350-92567369 None:intergenic 35.0%
! TGACCTGTTCTAAATCAAAC+AGG + chr3_1:92567350-92567369 Msa0388210:intron 35.0%
! GACCTGTTCTAAATCAAACA+GGG + chr3_1:92567351-92567370 Msa0388210:intron 35.0%
! TACCCTGTTTGATTTAGAAC+AGG - chr3_1:92567356-92567375 None:intergenic 35.0%
TAAAAAACAGGGGACTAAAC+AGG - chr3_1:92567394-92567413 None:intergenic 35.0%
!! TGTAGATTAGCTTGGTTCTA+GGG - chr3_1:92566814-92566833 None:intergenic 35.0%
!! ATGTAGATTAGCTTGGTTCT+AGG - chr3_1:92566815-92566834 None:intergenic 35.0%
! TTGGACTATGTAGATTAGCT+TGG - chr3_1:92567476-92567495 None:intergenic 35.0%
! GTTAACGTAAATCGGTTTCT+TGG + chr3_1:92567502-92567521 Msa0388210:intron 35.0%
!!! TTATGTTTTGGCTTGTGCTT+TGG + chr3_1:92567575-92567594 Msa0388210:intron 35.0%
!!! TATGTTTTGGCTTGTGCTTT+GGG + chr3_1:92567576-92567595 Msa0388210:intron 35.0%
!! GCTTTGGCTCTTTATTTCTT+CGG + chr3_1:92567624-92567643 Msa0388210:intron 35.0%
TTCACTTTGACAAGTGATGA+CGG - chr3_1:92568023-92568042 None:intergenic 35.0%
GATATGGTAGTTAGAGAAAG+TGG - chr3_1:92568073-92568092 None:intergenic 35.0%
ATCATGTTGTGCAGATCATT+TGG - chr3_1:92568230-92568249 None:intergenic 35.0%
!! GAAAAGATTACCGATTCAGA+AGG - chr3_1:92568383-92568402 None:intergenic 35.0%
! AGCTTTCTAAAGGAGTTCAA+TGG - chr3_1:92568421-92568440 None:intergenic 35.0%
GGAGAAAGAAGCTAATATAC+TGG - chr3_1:92568583-92568602 None:intergenic 35.0%
GAATAGTGACTTCACAAATG+TGG + chr3_1:92568664-92568683 Msa0388210:intron 35.0%
! ACAATGTCTTGTGATGGAAT+TGG + chr3_1:92568871-92568890 Msa0388210:CDS 35.0%
GTTATCTGATGGAATGTACT+TGG - chr3_1:92568900-92568919 None:intergenic 35.0%
GGGACATGTATTTGTCATTA+AGG + chr3_1:92569207-92569226 Msa0388210:intron 35.0%
ATGCTTGTGGTATTCATACA+TGG + chr3_1:92569242-92569261 Msa0388210:intron 35.0%
TTCATACATGGACACATAAC+TGG + chr3_1:92569254-92569273 Msa0388210:intron 35.0%
TCATACATGGACACATAACT+GGG + chr3_1:92569255-92569274 Msa0388210:intron 35.0%
AGTGTTAACCTTAGACTTAG+AGG + chr3_1:92569279-92569298 Msa0388210:intron 35.0%
ATGCTTGTGGTATTCATACA+TGG + chr3_1:92569242-92569261 Msa0388210:intron 35.0%
TTCATACATGGACACATAAC+TGG + chr3_1:92569254-92569273 Msa0388210:intron 35.0%
TCATACATGGACACATAACT+GGG + chr3_1:92569255-92569274 Msa0388210:intron 35.0%
!! TCAATAAGTGCTGATCATGT+AGG + chr3_1:92569705-92569724 Msa0388210:intron 35.0%
CAGCTTATACAGAGTTTATG+TGG - chr3_1:92569783-92569802 None:intergenic 35.0%
GGATTAAACTGTTAACAACG+AGG + chr3_1:92570023-92570042 Msa0388210:intron 35.0%
TTAAACTGTTAACAACGAGG+GGG + chr3_1:92570026-92570045 Msa0388210:intron 35.0%
ATCAGAAATCACATTGCTTC+TGG - chr3_1:92570211-92570230 None:intergenic 35.0%
GAAAGTAACACCTATGAGAT+AGG + chr3_1:92570458-92570477 Msa0388210:CDS 35.0%
GAGTTACTTACCTATCTCAT+AGG - chr3_1:92570471-92570490 None:intergenic 35.0%
!!! TTTTTTCTCTAGCACATTGG+GGG - chr3_1:92570493-92570512 None:intergenic 35.0%
!!! CTTTTTTCTCTAGCACATTG+GGG - chr3_1:92570494-92570513 None:intergenic 35.0%
!!! CCTTTTTTCTCTAGCACATT+GGG - chr3_1:92570495-92570514 None:intergenic 35.0%
CCAATGTGCTAGAGAAAAAA+GGG + chr3_1:92570493-92570512 Msa0388210:intron 35.0%
CAATGTGCTAGAGAAAAAAG+GGG + chr3_1:92570494-92570513 Msa0388210:intron 35.0%
! GAATTGATTCCCTTGCAATT+GGG - chr3_1:92570678-92570697 None:intergenic 35.0%
CAATTGCAAGGGAATCAATT+CGG + chr3_1:92570677-92570696 Msa0388210:CDS 35.0%
AATTGCAAGGGAATCAATTC+GGG + chr3_1:92570678-92570697 Msa0388210:CDS 35.0%
AGCGGTACAATATTACTCTT+GGG - chr3_1:92570849-92570868 None:intergenic 35.0%
AAGCGGTACAATATTACTCT+TGG - chr3_1:92570850-92570869 None:intergenic 35.0%
!!! CATGACATATTGTTTTGACC+TGG + chr3_1:92570899-92570918 Msa0388210:intron 35.0%
TACTCTATTCTACCATTACC+AGG - chr3_1:92570920-92570939 None:intergenic 35.0%
ATACAATCTTGACTCCATTG+AGG - chr3_1:92571000-92571019 None:intergenic 35.0%
! CAAGATTGTATTGCTGTTGT+AGG + chr3_1:92571009-92571028 Msa0388210:CDS 35.0%
TGGAAAGTCTGGTTGAAAAT+TGG + chr3_1:92571133-92571152 Msa0388210:CDS 35.0%
GGAAAGTCTGGTTGAAAATT+GGG + chr3_1:92571134-92571153 Msa0388210:CDS 35.0%
!! AAAAAGCGTTCATGCTTAAC+AGG - chr3_1:92571412-92571431 None:intergenic 35.0%
TTAGAACATCGCTACAGTAT+TGG + chr3_1:92571498-92571517 Msa0388210:intron 35.0%
GGGAAGACACTTAAAAACTA+TGG + chr3_1:92571617-92571636 Msa0388210:intron 35.0%
TTAAAAACTATGGCTGATCC+CGG + chr3_1:92571627-92571646 Msa0388210:intron 35.0%
TTGCGTCTTATATTACAGAG+GGG - chr3_1:92571704-92571723 None:intergenic 35.0%
TATTAGGTGTTAAGTTCCAC+GGG + chr3_1:92571742-92571761 Msa0388210:intron 35.0%
ACTTAATAGCAATGCTCTGT+GGG - chr3_1:92571793-92571812 None:intergenic 35.0%
AACTTAATAGCAATGCTCTG+TGG - chr3_1:92571794-92571813 None:intergenic 35.0%
TTGCATAGCAAGTAAGTCAT+GGG - chr3_1:92571864-92571883 None:intergenic 35.0%
ATTGCATAGCAAGTAAGTCA+TGG - chr3_1:92571865-92571884 None:intergenic 35.0%
! AAAGCAGTGAGTTGAATCTT+AGG - chr3_1:92572016-92572035 None:intergenic 35.0%
AAAAATGAGTGTCTTGATGC+AGG + chr3_1:92572165-92572184 Msa0388210:intron 35.0%
ATTGCAGGATGTTCATGATA+GGG + chr3_1:92572418-92572437 Msa0388210:intron 35.0%
GCTTCTACAACACAATGTAT+CGG + chr3_1:92572457-92572476 Msa0388210:CDS 35.0%
! AATACGGAAACTGCTTGTTT+TGG - chr3_1:92572506-92572525 None:intergenic 35.0%
AAATCAATCCAGACTGAATG+TGG - chr3_1:92572625-92572644 None:intergenic 35.0%
TTGGACATTTCTCAGACATA+TGG + chr3_1:92572829-92572848 Msa0388210:intron 35.0%
TGTGACATGATTAGAAGTCA+AGG - chr3_1:92573384-92573403 None:intergenic 35.0%
AGCACAAGTTTAGATGAATG+AGG - chr3_1:92573552-92573571 None:intergenic 35.0%
AAAGATGATGTGAGAGATAC+TGG + chr3_1:92573895-92573914 Msa0388210:CDS 35.0%
ACTACCAATATCCTTATCAG+AGG + chr3_1:92574158-92574177 Msa0388210:CDS 35.0%
CAAACCTCTGATAAGGATAT+TGG - chr3_1:92574165-92574184 None:intergenic 35.0%
TTCAAAGCAAACCTCTGATA+AGG - chr3_1:92574172-92574191 None:intergenic 35.0%
!!! TACTGGACATTTTTTGGTGT+TGG - chr3_1:92574450-92574469 None:intergenic 35.0%
CCACAGATAAACCAATATAC+TGG - chr3_1:92574467-92574486 None:intergenic 35.0%
!! CCAGTATATTGGTTTATCTG+TGG + chr3_1:92574464-92574483 Msa0388210:intron 35.0%
TCAATGATGCAATTGCAAGA+GGG - chr3_1:92574537-92574556 None:intergenic 35.0%
AGAACTTGAAATTAGGAGAC+TGG - chr3_1:92574624-92574643 None:intergenic 35.0%
CAAATTTGGACAAAGCTGAT+TGG - chr3_1:92574780-92574799 None:intergenic 35.0%
! CAATCAGCTTTGTCCAAATT+TGG + chr3_1:92574778-92574797 Msa0388210:CDS 35.0%
GTATGCACCATTAAGTTTCA+GGG - chr3_1:92574808-92574827 None:intergenic 35.0%
AGTATGCACCATTAAGTTTC+AGG - chr3_1:92574809-92574828 None:intergenic 35.0%
TGCATTGTTATACACTGATC+TGG - chr3_1:92574940-92574959 None:intergenic 35.0%
AGATCAGTGTATAACAATGC+AGG + chr3_1:92574939-92574958 Msa0388210:three_prime_UTR 35.0%
GATCAGTGTATAACAATGCA+GGG + chr3_1:92574940-92574959 Msa0388210:three_prime_UTR 35.0%
ATCAGTGTATAACAATGCAG+GGG + chr3_1:92574941-92574960 Msa0388210:three_prime_UTR 35.0%
AATGAATCACGATGTTGGAT+TGG - chr3_1:92575003-92575022 None:intergenic 35.0%
CATCTAATGAATCACGATGT+TGG - chr3_1:92575008-92575027 None:intergenic 35.0%
CAAGCGATTATTGTGTTCTA+CGG + chr3_1:92575104-92575123 Msa0388210:three_prime_UTR 35.0%
GGAAGATGAAGATCGATAGT+TGG - chr3_1:92565637-92565656 None:intergenic 40.0%
TCTTCATCTTCCATCCTTGT+TGG + chr3_1:92565645-92565664 Msa0388210:five_prime_UTR 40.0%
TGAGATCTAACCAACAAGGA+TGG - chr3_1:92565658-92565677 None:intergenic 40.0%
GAAGGAGATCGATTAGATTG+CGG - chr3_1:92565756-92565775 None:intergenic 40.0%
GTAAGATGAAGAGATGAGTG+AGG - chr3_1:92565805-92565824 None:intergenic 40.0%
ATCAGATACTTCACTCTTCC+TGG - chr3_1:92566204-92566223 None:intergenic 40.0%
ATCGTCAAAAGAGCAAGATC+CGG - chr3_1:92566437-92566456 None:intergenic 40.0%
TCAAAGGGATTGTAAGGATC+AGG + chr3_1:92566466-92566485 Msa0388210:CDS 40.0%
! AACTTGGTGGAGTATTTGGT+TGG + chr3_1:92566542-92566561 Msa0388210:CDS 40.0%
! ACTTGGTGGAGTATTTGGTT+GGG + chr3_1:92566543-92566562 Msa0388210:CDS 40.0%
AGTATTTGGTTGGGCCTTTA+GGG + chr3_1:92566552-92566571 Msa0388210:CDS 40.0%
TAATAGTTATGTCAGGACGG+TGG + chr3_1:92566592-92566611 Msa0388210:CDS 40.0%
AGTTCTGTTCAACTTCGTGA+AGG + chr3_1:92566776-92566795 Msa0388210:intron 40.0%
CAACTTCGTGAAGGTTTAAG+AGG + chr3_1:92566785-92566804 Msa0388210:intron 40.0%
!!! ATTTTTTGGGCCTGTGCTTT+GGG + chr3_1:92566942-92566961 Msa0388210:intron 40.0%
TTCCTTAGTTGGGAAATGGA+GGG + chr3_1:92566976-92566995 Msa0388210:intron 40.0%
CGAGTATAATTCCCTTGTAC+CGG + chr3_1:92567043-92567062 Msa0388210:intron 40.0%
TATTCTGGTAGTCTGTACTC+CGG + chr3_1:92567241-92567260 Msa0388210:intron 40.0%
! CCATGAGACAACTTTTTGTC+CGG - chr3_1:92567263-92567282 None:intergenic 40.0%
!! GTAGATTAGCTTGGTTCTAG+GGG - chr3_1:92567467-92567486 None:intergenic 40.0%
TGTAGTTACTGGAGAGAGAA+AGG + chr3_1:92567525-92567544 Msa0388210:intron 40.0%
GTAGTTACTGGAGAGAGAAA+GGG + chr3_1:92567526-92567545 Msa0388210:intron 40.0%
TAGTAGTTACCTCCGTAGTT+GGG + chr3_1:92567600-92567619 Msa0388210:intron 40.0%
ATCAATCCATGTCCAGTAGA+GGG - chr3_1:92567682-92567701 None:intergenic 40.0%
AATCAATCCATGTCCAGTAG+AGG - chr3_1:92567683-92567702 None:intergenic 40.0%
! TGAACTCCTTTAGAAAGCTG+AGG + chr3_1:92568422-92568441 Msa0388210:intron 40.0%
TATGCACCTCAGCTTTCTAA+AGG - chr3_1:92568431-92568450 None:intergenic 40.0%
AATGTCTTTCTCATTGTGGC+AGG + chr3_1:92568739-92568758 Msa0388210:intron 40.0%
! ATGTCTTGTGATGGAATTGG+TGG + chr3_1:92568874-92568893 Msa0388210:CDS 40.0%
CATGCTGTAGTCTATCTTCA+AGG - chr3_1:92568949-92568968 None:intergenic 40.0%
GATAGACTACAGCATGCAAA+TGG + chr3_1:92568953-92568972 Msa0388210:CDS 40.0%
CCATAGATAAAGTCAAGTGC+AGG - chr3_1:92569009-92569028 None:intergenic 40.0%
CCTGCACTTGACTTTATCTA+TGG + chr3_1:92569006-92569025 Msa0388210:CDS 40.0%
GTAGCTCACTGAATCATACA+CGG + chr3_1:92569184-92569203 Msa0388210:intron 40.0%
TAGCTCACTGAATCATACAC+GGG + chr3_1:92569185-92569204 Msa0388210:intron 40.0%
TACTTGCACCTCTAAGTCTA+AGG - chr3_1:92569290-92569309 None:intergenic 40.0%
CAGTTCCTTAAGGTTCTGTA+AGG + chr3_1:92569354-92569373 Msa0388210:intron 40.0%
TCCTTTGGTTGAAACCAGTT+TGG + chr3_1:92569466-92569485 Msa0388210:intron 40.0%
CACTCTCATTTCCTCTTCTA+TGG - chr3_1:92569756-92569775 None:intergenic 40.0%
GAGCTCATACATGGTATAAG+TGG + chr3_1:92569823-92569842 Msa0388210:intron 40.0%
! AGCTGAGCCTTATGCAAATA+TGG - chr3_1:92570093-92570112 None:intergenic 40.0%
TAAGGCTCAGCTTGATTACA+TGG + chr3_1:92570101-92570120 Msa0388210:intron 40.0%
AGCTCACTTGAGTTAAGAGA+GGG - chr3_1:92570274-92570293 None:intergenic 40.0%
!! ATAGAAGTGTTTGTAGTCCG+AGG - chr3_1:92570372-92570391 None:intergenic 40.0%
CATATGATGGCTCGTTATAC+TGG - chr3_1:92570397-92570416 None:intergenic 40.0%
CCCAATGTGCTAGAGAAAAA+AGG + chr3_1:92570492-92570511 Msa0388210:intron 40.0%
!!! CCCTTTTTTCTCTAGCACAT+TGG - chr3_1:92570496-92570515 None:intergenic 40.0%
GCTAGAGAAAAAAGGGGATT+AGG + chr3_1:92570500-92570519 Msa0388210:intron 40.0%
ATGTTGACATCCCAATTGCA+AGG + chr3_1:92570665-92570684 Msa0388210:CDS 40.0%
TGTTGACATCCCAATTGCAA+GGG + chr3_1:92570666-92570685 Msa0388210:CDS 40.0%
! CGAATTGATTCCCTTGCAAT+TGG - chr3_1:92570679-92570698 None:intergenic 40.0%
! CAAATACTTGCTAGATACCC+TGG + chr3_1:92570815-92570834 Msa0388210:intron 40.0%
CAACAATGTCCAAGAACCTA+AGG + chr3_1:92571044-92571063 Msa0388210:CDS 40.0%
ACCAGACTTTCCAAGACATA+CGG - chr3_1:92571126-92571145 None:intergenic 40.0%
TTGGGATAGTTGGATCATGA+AGG - chr3_1:92571256-92571275 None:intergenic 40.0%
ATCATTCAAGACCAAAGAGC+CGG - chr3_1:92571332-92571351 None:intergenic 40.0%
ATATAAGACGCAATTGTGGC+TGG + chr3_1:92571711-92571730 Msa0388210:intron 40.0%
!! CATGAGCTTTTGTTGATTGC+AGG + chr3_1:92572403-92572422 Msa0388210:intron 40.0%
GATTGCAGGATGTTCATGAT+AGG + chr3_1:92572417-92572436 Msa0388210:intron 40.0%
TCTACAACACAATGTATCGG+TGG + chr3_1:92572460-92572479 Msa0388210:CDS 40.0%
! GCTCTGAGTATCAGCAAATA+CGG - chr3_1:92572522-92572541 None:intergenic 40.0%
! GCAGTAAATTTTGCCCGAAA+TGG - chr3_1:92572659-92572678 None:intergenic 40.0%
AAGGATGATGATCAATGAGG+AGG + chr3_1:92572982-92573001 Msa0388210:intron 40.0%
GGGGAGAAACACAGTTTAAA+TGG - chr3_1:92573351-92573370 None:intergenic 40.0%
AAACTTGTGCTTCTATGCCT+TGG + chr3_1:92573561-92573580 Msa0388210:intron 40.0%
GGGAAGAAATAGACAAGGAT+CGG - chr3_1:92573665-92573684 None:intergenic 40.0%
CTGAAAACTCAAATGTCCCT+CGG - chr3_1:92573771-92573790 None:intergenic 40.0%
TGGCAATCTGTCTATTAGTG+CGG + chr3_1:92573798-92573817 Msa0388210:CDS 40.0%
! TCTCACATCATCTTTTTCCG+TGG - chr3_1:92573890-92573909 None:intergenic 40.0%
GAAAATGCCAAATCTGCAAG+CGG - chr3_1:92573985-92574004 None:intergenic 40.0%
GATCATCAATTGCCAATGCT+TGG - chr3_1:92574026-92574045 None:intergenic 40.0%
! TTGGCAATTGATGATCTGCT+TGG + chr3_1:92574030-92574049 Msa0388210:CDS 40.0%
GTCAATGATGCAATTGCAAG+AGG - chr3_1:92574538-92574557 None:intergenic 40.0%
TCAATACAGTGCATTGCATC+CGG + chr3_1:92574595-92574614 Msa0388210:CDS 40.0%
GTTTCAGGGCAAACCAAATT+TGG - chr3_1:92574794-92574813 None:intergenic 40.0%
! TGGTTTGCCCTGAAACTTAA+TGG + chr3_1:92574798-92574817 Msa0388210:exon 40.0%
TCAGTGTATAACAATGCAGG+GGG + chr3_1:92574942-92574961 Msa0388210:three_prime_UTR 40.0%
AGTCGTAGAAAACATGAGTC+TGG + chr3_1:92575034-92575053 Msa0388210:three_prime_UTR 40.0%
GTCGTAGAAAACATGAGTCT+GGG + chr3_1:92575035-92575054 Msa0388210:three_prime_UTR 40.0%
TTCCGCACCAAATTTAATCG+CGG - chr3_1:92575141-92575160 None:intergenic 40.0%
GTTTGCAAGTCAACTTCCAG+TGG + chr3_1:92565713-92565732 Msa0388210:five_prime_UTR 45.0%
AAGTCAACTTCCAGTGGCTA+TGG + chr3_1:92565719-92565738 Msa0388210:exon 45.0%
TGAAGAGATGAGTGAGGGAA+CGG - chr3_1:92565799-92565818 None:intergenic 45.0%
!!! ACATCGCAATTGCCGCTTTT+TGG + chr3_1:92565882-92565901 Msa0388210:intron 45.0%
CTCTTAGAGTCATCAGTACC+CGG - chr3_1:92566266-92566285 None:intergenic 45.0%
!! GGGTACTGATGACTCTAAGA+GGG + chr3_1:92566265-92566284 Msa0388210:CDS 45.0%
TTCGTCTCTCTTTGGTGAGA+TGG + chr3_1:92566334-92566353 Msa0388210:CDS 45.0%
AACTCCTTAATGCCAGTCCT+CGG - chr3_1:92566502-92566521 None:intergenic 45.0%
GAGTTTGTGTTCACTTCGAG+TGG + chr3_1:92566517-92566536 Msa0388210:CDS 45.0%
GAGTATTTGGTTGGGCCTTT+AGG + chr3_1:92566551-92566570 Msa0388210:CDS 45.0%
ATCTGCATCAATACACGTGG+AGG - chr3_1:92566654-92566673 None:intergenic 45.0%
GCATTTGATGCTCAATGACC+AGG + chr3_1:92566691-92566710 Msa0388210:CDS 45.0%
ATGACCAGGATACTCAGGTA+AGG + chr3_1:92566705-92566724 Msa0388210:intron 45.0%
CAATCCTTACCTGAGTATCC+TGG - chr3_1:92566712-92566731 None:intergenic 45.0%
! ATTGAGGGAGGAGCTAGTTT+AGG + chr3_1:92566910-92566929 Msa0388210:intron 45.0%
!!! CATTTTTTGGGCCTGTGCTT+TGG + chr3_1:92566941-92566960 Msa0388210:intron 45.0%
TAACTTCTAGCCCAAAGCAC+AGG - chr3_1:92566955-92566974 None:intergenic 45.0%
CTTCCTTAGTTGGGAAATGG+AGG + chr3_1:92566975-92566994 Msa0388210:intron 45.0%
TCCTTAGTTGGGAAATGGAG+GGG + chr3_1:92566977-92566996 Msa0388210:intron 45.0%
CCAATCACTATCCGGTACAA+GGG - chr3_1:92567057-92567076 None:intergenic 45.0%
ACCAATCACTATCCGGTACA+AGG - chr3_1:92567058-92567077 None:intergenic 45.0%
AAGTACATGCCTCCATGCTT+GGG - chr3_1:92567085-92567104 None:intergenic 45.0%
TAAGTACATGCCTCCATGCT+TGG - chr3_1:92567086-92567105 None:intergenic 45.0%
! AAGCATGGAGGCATGTACTT+AGG + chr3_1:92567085-92567104 Msa0388210:intron 45.0%
! AGCATGGAGGCATGTACTTA+GGG + chr3_1:92567086-92567105 Msa0388210:intron 45.0%
CCGGACAAAAAGTTGTCTCA+TGG + chr3_1:92567260-92567279 Msa0388210:intron 45.0%
GCAAGAGACTGGACAAAAAC+AGG - chr3_1:92567309-92567328 None:intergenic 45.0%
GTCATGGGATTGAACAAGAC+AGG - chr3_1:92567334-92567353 None:intergenic 45.0%
! CGGTTTCTTGGTGTAGTTAC+TGG + chr3_1:92567514-92567533 Msa0388210:intron 45.0%
CTAGTAGTTACCTCCGTAGT+TGG + chr3_1:92567599-92567618 Msa0388210:intron 45.0%
ATAGTATGATCCCCCTCTAC+TGG + chr3_1:92567667-92567686 Msa0388210:intron 45.0%
TCAATCCATGTCCAGTAGAG+GGG - chr3_1:92567681-92567700 None:intergenic 45.0%
!!! TTTTAAAATGGGAACCCCGG+AGG - chr3_1:92568495-92568514 None:intergenic 45.0%
! GTTTGCTACGTGCAGCATTA+AGG + chr3_1:92568832-92568851 Msa0388210:intron 45.0%
ATGGGCACAATGTCTTGTGA+TGG + chr3_1:92568865-92568884 Msa0388210:CDS 45.0%
!! TGCAAATGGTGCTGTTGTCT+TGG + chr3_1:92568967-92568986 Msa0388210:CDS 45.0%
TATGGCTGATGTACATCAGC+AGG + chr3_1:92569024-92569043 Msa0388210:CDS 45.0%
AGCTCACTGAATCATACACG+GGG + chr3_1:92569186-92569205 Msa0388210:intron 45.0%
GAGCTATCTGTGAGTTCCTT+TGG + chr3_1:92569314-92569333 Msa0388210:intron 45.0%
CATCGCCTTACAGAACCTTA+AGG - chr3_1:92569225-92569244 None:intergenic 45.0%
! GCCAAACTGGTTTCAACCAA+AGG - chr3_1:92569470-92569489 None:intergenic 45.0%
CCAGCTTTACTATACTGCTC+AGG - chr3_1:92569528-92569547 None:intergenic 45.0%
CCTGAGCAGTATAGTAAAGC+TGG + chr3_1:92569525-92569544 Msa0388210:intron 45.0%
! TGTTTCTGTGAGCCATCTTG+TGG + chr3_1:92569801-92569820 Msa0388210:intron 45.0%
CATGTATGAGCTCCACAAGA+TGG - chr3_1:92569816-92569835 None:intergenic 45.0%
CATCTTGTGGAGCTCATACA+TGG + chr3_1:92569814-92569833 Msa0388210:intron 45.0%
GCTCACTTGAGTTAAGAGAG+GGG - chr3_1:92570273-92570292 None:intergenic 45.0%
GAGCTCACTTGAGTTAAGAG+AGG - chr3_1:92570275-92570294 None:intergenic 45.0%
CTCTTAACTCAAGTGAGCTC+AGG + chr3_1:92570275-92570294 Msa0388210:CDS 45.0%
! GCAGTTTCTGGAGATGGAAA+AGG + chr3_1:92570759-92570778 Msa0388210:CDS 45.0%
! CTATGTTACGTCTGAAGCTC+TGG + chr3_1:92570783-92570802 Msa0388210:CDS 45.0%
ACTCTTGGGCAAAAATGCCA+GGG - chr3_1:92570835-92570854 None:intergenic 45.0%
TACTCTTGGGCAAAAATGCC+AGG - chr3_1:92570836-92570855 None:intergenic 45.0%
TGTCCAAGAACCTAAGGCTA+AGG + chr3_1:92571050-92571069 Msa0388210:CDS 45.0%
TCCGTATGTCTTGGAAAGTC+TGG + chr3_1:92571122-92571141 Msa0388210:CDS 45.0%
TCTGGTTGAAAATTGGGACG+AGG + chr3_1:92571140-92571159 Msa0388210:CDS 45.0%
! TATACCTCTAACCGGCTCTT+TGG + chr3_1:92571318-92571337 Msa0388210:intron 45.0%
ACTTCCTGATATCAACAGCC+GGG - chr3_1:92571648-92571667 None:intergenic 45.0%
GACTTCCTGATATCAACAGC+CGG - chr3_1:92571649-92571668 None:intergenic 45.0%
CTATTGTCTAGTATGACCCG+TGG - chr3_1:92571761-92571780 None:intergenic 45.0%
TTTGCCAAACTCACTAGAGC+AGG - chr3_1:92571931-92571950 None:intergenic 45.0%
GACGGAAATGCAAACTGAAC+TGG - chr3_1:92571975-92571994 None:intergenic 45.0%
! CAGTGAGTTGAATCTTAGGC+TGG - chr3_1:92572012-92572031 None:intergenic 45.0%
!! AGATTTGGTGAGCAACTGCA+AGG - chr3_1:92572081-92572100 None:intergenic 45.0%
GTGAAAATCAGCAAGACCAG+CGG - chr3_1:92572274-92572293 None:intergenic 45.0%
!!! TGGTCTTGCTGATTTTCACC+AGG + chr3_1:92572275-92572294 Msa0388210:CDS 45.0%
!!! CGGAAACTGCTTGTTTTGGA+GGG - chr3_1:92572502-92572521 None:intergenic 45.0%
!!! ACGGAAACTGCTTGTTTTGG+AGG - chr3_1:92572503-92572522 None:intergenic 45.0%
CTGACTTACCACATTCAGTC+TGG + chr3_1:92572614-92572633 Msa0388210:intron 45.0%
! ATGAAGCACTAACACTGCTG+AGG + chr3_1:92572701-92572720 Msa0388210:intron 45.0%
ATACATGTCGTACGTGTGTC+GGG - chr3_1:92572750-92572769 None:intergenic 45.0%
GATACATGTCGTACGTGTGT+CGG - chr3_1:92572751-92572770 None:intergenic 45.0%
GACACACGTACGACATGTAT+CGG + chr3_1:92572750-92572769 Msa0388210:intron 45.0%
ATGAAGCACAGACTCCAACA+AGG - chr3_1:92573275-92573294 None:intergenic 45.0%
GGGAAGGGAAGAAATAGACA+AGG - chr3_1:92573670-92573689 None:intergenic 45.0%
CAGTGAACATGTAAGAAGGC+TGG - chr3_1:92573738-92573757 None:intergenic 45.0%
TTCACTGATAAGGAACACCG+AGG + chr3_1:92573751-92573770 Msa0388210:CDS 45.0%
TCACTGATAAGGAACACCGA+GGG + chr3_1:92573752-92573771 Msa0388210:CDS 45.0%
CTGTCTATTAGTGCGGAATC+CGG + chr3_1:92573805-92573824 Msa0388210:CDS 45.0%
GGATCTGCTTCTAAGTACCA+CGG + chr3_1:92573870-92573889 Msa0388210:CDS 45.0%
GTGAGAGATACTGGAAGCAA+TGG + chr3_1:92573904-92573923 Msa0388210:CDS 45.0%
TTCACAACCGCTTGCAGATT+TGG + chr3_1:92573975-92573994 Msa0388210:CDS 45.0%
!!! CAGTACAGCTTTTGGGTTGA+GGG - chr3_1:92574106-92574125 None:intergenic 45.0%
! CAGGATCCAGTACAGCTTTT+GGG - chr3_1:92574113-92574132 None:intergenic 45.0%
CATTTCTGCTGAAATGTGCC+AGG - chr3_1:92574132-92574151 None:intergenic 45.0%
CTGGCACATTTCAGCAGAAA+TGG + chr3_1:92574130-92574149 Msa0388210:CDS 45.0%
GTGATGTGGCAAGACTTTAC+TGG - chr3_1:92574252-92574271 None:intergenic 45.0%
AATGACTTTGCATGTGCCGT+AGG - chr3_1:92574576-92574595 None:intergenic 45.0%
TGATGACCAAAGCTCATCAC+AGG + chr3_1:92574738-92574757 Msa0388210:CDS 45.0%
AGAATGCCTGTGATGAGCTT+TGG - chr3_1:92574747-92574766 None:intergenic 45.0%
! TGGTGCATACTTTTGAGCTG+TGG + chr3_1:92574818-92574837 Msa0388210:three_prime_UTR 45.0%
! ACTGATCTGGTCCGTTTTAG+GGG - chr3_1:92574927-92574946 None:intergenic 45.0%
! CACTGATCTGGTCCGTTTTA+GGG - chr3_1:92574928-92574947 None:intergenic 45.0%
! ACACTGATCTGGTCCGTTTT+AGG - chr3_1:92574929-92574948 None:intergenic 45.0%
GATTGCGCCGCGATTAAATT+TGG + chr3_1:92575131-92575150 Msa0388210:three_prime_UTR 45.0%
!!! TATTTCAATTTTTTTTAAAT+AGG - chr3_1:92568197-92568216 None:intergenic 5.0%
!! TAAAAAAAAAAAAAAAGATT+TGG - chr3_1:92572096-92572115 None:intergenic 5.0%
!!! TTTTTAATTTGATAAATAAT+AGG + chr3_1:92572110-92572129 Msa0388210:intron 5.0%
!! TTGACTTGCAAACGCTCCTC+GGG - chr3_1:92565706-92565725 None:intergenic 50.0%
!! GTTGACTTGCAAACGCTCCT+CGG - chr3_1:92565707-92565726 None:intergenic 50.0%
GGAGATCGATTAGATTGCGG+TGG - chr3_1:92565753-92565772 None:intergenic 50.0%
!! CGGGTACTGATGACTCTAAG+AGG + chr3_1:92566264-92566283 Msa0388210:CDS 50.0%
AATGCCAGTCCTCGGATCAT+CGG - chr3_1:92566494-92566513 None:intergenic 50.0%
! TGATCCGAGGACTGGCATTA+AGG + chr3_1:92566495-92566514 Msa0388210:CDS 50.0%
TTCACTTCGAGTGGCGAACT+TGG + chr3_1:92566526-92566545 Msa0388210:CDS 50.0%
! GGCGAACTTGGTGGAGTATT+TGG + chr3_1:92566538-92566557 Msa0388210:CDS 50.0%
TCCTTCAACCCTGACCCTAA+AGG - chr3_1:92566569-92566588 None:intergenic 50.0%
GCTCAATGACCAGGATACTC+AGG + chr3_1:92566700-92566719 Msa0388210:CDS 50.0%
ACCCCTCCATTTCCCAACTA+AGG - chr3_1:92566981-92567000 None:intergenic 50.0%
AGTTGGGAAATGGAGGGGTT+TGG + chr3_1:92566982-92567001 Msa0388210:intron 50.0%
CCCTTGTACCGGATAGTGAT+TGG + chr3_1:92567054-92567073 Msa0388210:intron 50.0%
GGGAACGACCAATCACTATC+CGG - chr3_1:92567065-92567084 None:intergenic 50.0%
! TGATTGGTCGTTCCCAAGCA+TGG + chr3_1:92567070-92567089 Msa0388210:intron 50.0%
CAAGACAGGTAGCAAGAGAC+TGG - chr3_1:92567320-92567339 None:intergenic 50.0%
AGAGCCAAAGCTCCCAACTA+CGG - chr3_1:92567615-92567634 None:intergenic 50.0%
CAATCCATGTCCAGTAGAGG+GGG - chr3_1:92567680-92567699 None:intergenic 50.0%
!! CTCTGAGGTGGTTGACTCTA+AGG - chr3_1:92568310-92568329 None:intergenic 50.0%
CTTAGAGTCAACCACCTCAG+AGG + chr3_1:92568308-92568327 Msa0388210:CDS 50.0%
GCTCACTGAATCATACACGG+GGG + chr3_1:92569187-92569206 Msa0388210:intron 50.0%
GTTCTGTAAGGCGATGCTTG+TGG + chr3_1:92569229-92569248 Msa0388210:intron 50.0%
GTTCTGTAAGGCGATGCTTG+TGG + chr3_1:92569229-92569248 Msa0388210:intron 50.0%
GAGCTATCTGCGTGTTCCTT+TGG + chr3_1:92569451-92569470 Msa0388210:intron 50.0%
TACGGTGAACTGAGCCAAAC+TGG - chr3_1:92569483-92569502 None:intergenic 50.0%
TCAAGTGAGCTCAGGAAGTC+CGG + chr3_1:92570283-92570302 Msa0388210:CDS 50.0%
TCTAAGCCACCTGCATCTCT+TGG + chr3_1:92570322-92570341 Msa0388210:CDS 50.0%
GCATTACCAAGAGATGCAGG+TGG - chr3_1:92570331-92570350 None:intergenic 50.0%
CACGCATTACCAAGAGATGC+AGG - chr3_1:92570334-92570353 None:intergenic 50.0%
AGGGAATCAATTCGGGCTGT+TGG + chr3_1:92570685-92570704 Msa0388210:CDS 50.0%
! TGATCGGCTTCTGCAGTTTC+TGG + chr3_1:92570747-92570766 Msa0388210:CDS 50.0%
! GCTTCTGCAGTTTCTGGAGA+TGG + chr3_1:92570753-92570772 Msa0388210:CDS 50.0%
!! CTGCCTTAGCCTTAGGTTCT+TGG - chr3_1:92571056-92571075 None:intergenic 50.0%
! ATGAGAGCTGCCTTAGCCTT+AGG - chr3_1:92571063-92571082 None:intergenic 50.0%
AGGCTAAGGCAGCTCTCATA+TGG + chr3_1:92571064-92571083 Msa0388210:CDS 50.0%
GCAGCTCTCATATGGATGCT+GGG + chr3_1:92571072-92571091 Msa0388210:CDS 50.0%
CAGCTCTCATATGGATGCTG+GGG + chr3_1:92571073-92571092 Msa0388210:CDS 50.0%
AGCTCTCATATGGATGCTGG+GGG + chr3_1:92571074-92571093 Msa0388210:CDS 50.0%
GCATGATGCTCCGTATGTCT+TGG + chr3_1:92571113-92571132 Msa0388210:CDS 50.0%
AAGACCAAAGAGCCGGTTAG+AGG - chr3_1:92571325-92571344 None:intergenic 50.0%
TGATCCCGGCTGTTGATATC+AGG + chr3_1:92571641-92571660 Msa0388210:intron 50.0%
ATTACAGAGGGGACGACTTC+TGG - chr3_1:92571693-92571712 None:intergenic 50.0%
GTGGCTGGAGCCTTGATATT+AGG + chr3_1:92571726-92571745 Msa0388210:intron 50.0%
CAGTCCTGCTCTAGTGAGTT+TGG + chr3_1:92571924-92571943 Msa0388210:intron 50.0%
! GCATTTCCGTCTGCTTTGAG+CGG + chr3_1:92571984-92572003 Msa0388210:intron 50.0%
TCCCAGTGCTTTCTGAGTCT+CGG - chr3_1:92572241-92572260 None:intergenic 50.0%
GCACTAACACTGCTGAGGTT+AGG + chr3_1:92572706-92572725 Msa0388210:intron 50.0%
CGATGTTGACGTCTCCTTGT+TGG + chr3_1:92573258-92573277 Msa0388210:intron 50.0%
! TGCTTCTATGCCTTGGCTTG+AGG + chr3_1:92573568-92573587 Msa0388210:intron 50.0%
! GCTTCTATGCCTTGGCTTGA+GGG + chr3_1:92573569-92573588 Msa0388210:intron 50.0%
CGCAGGAACAACAGAATCTC+CGG - chr3_1:92573827-92573846 None:intergenic 50.0%
GAGAGTGGAGGCAAATGACA+AGG + chr3_1:92573849-92573868 Msa0388210:CDS 50.0%
TGAAGGGGCAGACCCATTAT+AGG - chr3_1:92573950-92573969 None:intergenic 50.0%
!!! TTTTGGGTTGAGGGTCAACG+GGG - chr3_1:92574097-92574116 None:intergenic 50.0%
!!! CTTTTGGGTTGAGGGTCAAC+GGG - chr3_1:92574098-92574117 None:intergenic 50.0%
!!! GCTTTTGGGTTGAGGGTCAA+CGG - chr3_1:92574099-92574118 None:intergenic 50.0%
!!! CCAGTACAGCTTTTGGGTTG+AGG - chr3_1:92574107-92574126 None:intergenic 50.0%
CCTCAACCCAAAAGCTGTAC+TGG + chr3_1:92574104-92574123 Msa0388210:CDS 50.0%
! CCAGGATCCAGTACAGCTTT+TGG - chr3_1:92574114-92574133 None:intergenic 50.0%
CCAAAAGCTGTACTGGATCC+TGG + chr3_1:92574111-92574130 Msa0388210:CDS 50.0%
! ATGTGCCGTAGGAGTGCATT+GGG - chr3_1:92574565-92574584 None:intergenic 50.0%
ATACAGTGCATTGCATCCGG+CGG + chr3_1:92574598-92574617 Msa0388210:CDS 50.0%
CTAATCCCCCTCCCCTAAAA+CGG + chr3_1:92574913-92574932 Msa0388210:three_prime_UTR 50.0%
!!! ATCTGGTCCGTTTTAGGGGA+GGG - chr3_1:92574923-92574942 None:intergenic 50.0%
TCTGGGTTGCAAGTGTGTAG+AGG + chr3_1:92575052-92575071 Msa0388210:three_prime_UTR 50.0%
! CGCCGCGATTAAATTTGGTG+CGG + chr3_1:92575136-92575155 Msa0388210:three_prime_UTR 50.0%
! CTAATGATGCAAGGTGCCTG+CGG + chr3_1:92575197-92575216 Msa0388210:three_prime_UTR 50.0%
GCTAAAAAAGGAGACACCGC+AGG - chr3_1:92575216-92575235 None:intergenic 50.0%
CGACGTAGTAGAAGCTGACG+TGG - chr3_1:92565490-92565509 None:intergenic 55.0%
CGATTAGATTGCGGTGGTGC+AGG - chr3_1:92565747-92565766 None:intergenic 55.0%
TTACAGCTACGGCAGCTTGC+TGG + chr3_1:92566230-92566249 Msa0388210:CDS 55.0%
! TACAGCTACGGCAGCTTGCT+GGG + chr3_1:92566231-92566250 Msa0388210:CDS 55.0%
GATCAGGATCCGATGATCCG+AGG + chr3_1:92566482-92566501 Msa0388210:CDS 55.0%
ACTTCGAGTGGCGAACTTGG+TGG + chr3_1:92566529-92566548 Msa0388210:CDS 55.0%
!! TTGGTTGGGCCTTTAGGGTC+AGG + chr3_1:92566557-92566576 Msa0388210:CDS 55.0%
!! TGGTTGGGCCTTTAGGGTCA+GGG + chr3_1:92566558-92566577 Msa0388210:CDS 55.0%
!! GCCTTTAGGGTCAGGGTTGA+AGG + chr3_1:92566565-92566584 Msa0388210:CDS 55.0%
GTCAGGACGGTGGCAGTAAT+CGG + chr3_1:92566602-92566621 Msa0388210:CDS 55.0%
TTGGTCGTTCCCAAGCATGG+AGG + chr3_1:92567073-92567092 Msa0388210:intron 55.0%
ACCTCCGTAGTTGGGAGCTT+TGG + chr3_1:92567608-92567627 Msa0388210:intron 55.0%
TGATCCCCCTCTACTGGACA+TGG + chr3_1:92567673-92567692 Msa0388210:intron 55.0%
CACCTCAGAGGAAGCAGCTA+GGG + chr3_1:92568320-92568339 Msa0388210:CDS 55.0%
GCTTCAAAACCACCCTCCTC+CGG + chr3_1:92568476-92568495 Msa0388210:intron 55.0%
CTTCAAAACCACCCTCCTCC+GGG + chr3_1:92568477-92568496 Msa0388210:intron 55.0%
TTCAAAACCACCCTCCTCCG+GGG + chr3_1:92568478-92568497 Msa0388210:intron 55.0%
AAAATGGGAACCCCGGAGGA+GGG - chr3_1:92568491-92568510 None:intergenic 55.0%
TAAAATGGGAACCCCGGAGG+AGG - chr3_1:92568492-92568511 None:intergenic 55.0%
GGCAGCTCTCATATGGATGC+TGG + chr3_1:92571071-92571090 Msa0388210:CDS 55.0%
CTGGTTCCGCTCAAAGCAGA+CGG - chr3_1:92571993-92572012 None:intergenic 55.0%
CAGTGCTTTCTGAGTCTCGG+GGG - chr3_1:92572238-92572257 None:intergenic 55.0%
CCAGTGCTTTCTGAGTCTCG+GGG - chr3_1:92572239-92572258 None:intergenic 55.0%
CCCAGTGCTTTCTGAGTCTC+GGG - chr3_1:92572240-92572259 None:intergenic 55.0%
!! CCCGAGACTCAGAAAGCACT+GGG + chr3_1:92572237-92572256 Msa0388210:CDS 55.0%
! TGTATCGGTGGCTGAGAGTG+TGG + chr3_1:92572472-92572491 Msa0388210:CDS 55.0%
AAGCTGTAGCCCTCAAGCCA+AGG - chr3_1:92573581-92573600 None:intergenic 55.0%
GAGGGCTACAGCTTACACTG+TGG + chr3_1:92573587-92573606 Msa0388210:intron 55.0%
GCTACAGCTTACACTGTGGC+AGG + chr3_1:92573591-92573610 Msa0388210:intron 55.0%
TGTTGTTCCTGCGCAGAGAG+TGG + chr3_1:92573834-92573853 Msa0388210:CDS 55.0%
GGGGCAGACCCATTATAGGA+AGG - chr3_1:92573946-92573965 None:intergenic 55.0%
CGGTTGTGAAGCTGCTGAAG+GGG - chr3_1:92573965-92573984 None:intergenic 55.0%
GCGGTTGTGAAGCTGCTGAA+GGG - chr3_1:92573966-92573985 None:intergenic 55.0%
AGCGGTTGTGAAGCTGCTGA+AGG - chr3_1:92573967-92573986 None:intergenic 55.0%
! CAATGCTTGGCTAGTCGTGC+TGG - chr3_1:92574013-92574032 None:intergenic 55.0%
! CAGCACGACTAGCCAAGCAT+TGG + chr3_1:92574011-92574030 Msa0388210:CDS 55.0%
!! TTTGGGTTGAGGGTCAACGG+GGG - chr3_1:92574096-92574115 None:intergenic 55.0%
CGACTCCCAATGCACTCCTA+CGG + chr3_1:92574557-92574576 Msa0388210:CDS 55.0%
! CATGTGCCGTAGGAGTGCAT+TGG - chr3_1:92574566-92574585 None:intergenic 55.0%
! GAAATTAGGAGACTGGCCGC+CGG - chr3_1:92574617-92574636 None:intergenic 55.0%
! TTAGGGGAGGGGGATTAGTG+TGG - chr3_1:92574911-92574930 None:intergenic 55.0%
!!! TCTGGTCCGTTTTAGGGGAG+GGG - chr3_1:92574922-92574941 None:intergenic 55.0%
!!! GATCTGGTCCGTTTTAGGGG+AGG - chr3_1:92574924-92574943 None:intergenic 55.0%
AAGACGGCGCGAATTTCCCG+AGG + chr3_1:92565687-92565706 Msa0388210:five_prime_UTR 60.0%
GATGAGTGAGGGAACGGACC+CGG - chr3_1:92565793-92565812 None:intergenic 60.0%
GGATCCGATGATCCGAGGAC+TGG + chr3_1:92566487-92566506 Msa0388210:CDS 60.0%
GCCAAAGCTCCCAACTACGG+AGG - chr3_1:92567612-92567631 None:intergenic 60.0%
! CCTAGCTGCTTCCTCTGAGG+TGG - chr3_1:92568322-92568341 None:intergenic 60.0%
CCACCTCAGAGGAAGCAGCT+AGG + chr3_1:92568319-92568338 Msa0388210:CDS 60.0%
CTCCCTAGCTGCTTCCTCTG+AGG - chr3_1:92568325-92568344 None:intergenic 60.0%
! CCCCGAGACTCAGAAAGCAC+TGG + chr3_1:92572236-92572255 Msa0388210:CDS 60.0%
!! GAAAGCACTGGGAGCTGCAC+TGG + chr3_1:92572248-92572267 Msa0388210:CDS 60.0%
GGTTAGGCGTGTCCCCATGT+CGG + chr3_1:92572722-92572741 Msa0388210:intron 60.0%
TGTTCCTGCGCAGAGAGTGG+AGG + chr3_1:92573837-92573856 Msa0388210:CDS 60.0%
TTTGCCTCCACTCTCTGCGC+AGG - chr3_1:92573844-92573863 None:intergenic 60.0%
!!! CTGGTCCGTTTTAGGGGAGG+GGG - chr3_1:92574921-92574940 None:intergenic 60.0%
GGTGCAGGAGCCATAGCCAC+TGG - chr3_1:92565732-92565751 None:intergenic 65.0%
AGTGAGGGAACGGACCCGGA+CGG - chr3_1:92565789-92565808 None:intergenic 65.0%
! GCTTGCTGGGAGTCGAGCTC+CGG + chr3_1:92566244-92566263 Msa0388210:CDS 65.0%
CTTGCTGGGAGTCGAGCTCC+GGG + chr3_1:92566245-92566264 Msa0388210:CDS 65.0%
!! GGACGAGGAGCATTCTGCCG+AGG + chr3_1:92571155-92571174 Msa0388210:CDS 65.0%
!! GTGTGTCGGGCACCGACATG+GGG - chr3_1:92572737-92572756 None:intergenic 65.0%
!! CGTGTGTCGGGCACCGACAT+GGG - chr3_1:92572738-92572757 None:intergenic 65.0%
!! ACGTGTGTCGGGCACCGACA+TGG - chr3_1:92572739-92572758 None:intergenic 65.0%
AGGGTCAACGGGGGAGGTGA+CGG - chr3_1:92574087-92574106 None:intergenic 65.0%
CCTTCGCCGTCGCAACCGTC+CGG + chr3_1:92565771-92565790 Msa0388210:CDS 70.0%
CTTCGCCGTCGCAACCGTCC+GGG + chr3_1:92565772-92565791 Msa0388210:CDS 70.0%
ACGGACCCGGACGGTTGCGA+CGG - chr3_1:92565780-92565799 None:intergenic 70.0%
ATGGGAACCCCGGAGGAGGG+TGG - chr3_1:92568488-92568507 None:intergenic 70.0%
GGGTTGAGGGTCAACGGGGG+AGG - chr3_1:92574093-92574112 None:intergenic 70.0%
CCGGACGGTTGCGACGGCGA+AGG - chr3_1:92565774-92565793 None:intergenic 75.0%
! CTGGGAGCTGCACTGGCCGC+TGG + chr3_1:92572255-92572274 Msa0388210:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 92565432 92575236 92565432 ID=Msa0388210;Name=Msa0388210
chr3_1 mRNA 92565432 92575236 92565432 ID=Msa0388210-mRNA-1;Parent=Msa0388210;Name=Msa0388210-mRNA-1;_AED=0.05;_eAED=0.05;_QI=306|0.9|0.90|1|0.9|0.90|11|426|863
chr3_1 exon 92565432 92565793 92565432 ID=Msa0388210-mRNA-1:exon:25979;Parent=Msa0388210-mRNA-1
chr3_1 exon 92566205 92566721 92566205 ID=Msa0388210-mRNA-1:exon:25980;Parent=Msa0388210-mRNA-1
chr3_1 exon 92568267 92568391 92568267 ID=Msa0388210-mRNA-1:exon:25981;Parent=Msa0388210-mRNA-1
chr3_1 exon 92568847 92569045 92568847 ID=Msa0388210-mRNA-1:exon:25982;Parent=Msa0388210-mRNA-1
chr3_1 exon 92570251 92570479 92570251 ID=Msa0388210-mRNA-1:exon:25983;Parent=Msa0388210-mRNA-1
chr3_1 exon 92570638 92570804 92570638 ID=Msa0388210-mRNA-1:exon:25984;Parent=Msa0388210-mRNA-1
chr3_1 exon 92570967 92571176 92570967 ID=Msa0388210-mRNA-1:exon:25985;Parent=Msa0388210-mRNA-1
chr3_1 exon 92572187 92572366 92572187 ID=Msa0388210-mRNA-1:exon:25986;Parent=Msa0388210-mRNA-1
chr3_1 exon 92572425 92572601 92572425 ID=Msa0388210-mRNA-1:exon:25987;Parent=Msa0388210-mRNA-1
chr3_1 exon 92573739 92574179 92573739 ID=Msa0388210-mRNA-1:exon:25988;Parent=Msa0388210-mRNA-1
chr3_1 exon 92574520 92575236 92574520 ID=Msa0388210-mRNA-1:exon:25989;Parent=Msa0388210-mRNA-1
chr3_1 five_prime_UTR 92565432 92565737 92565432 ID=Msa0388210-mRNA-1:five_prime_utr;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92565738 92565793 92565738 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92566205 92566721 92566205 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92568267 92568391 92568267 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92568847 92569045 92568847 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92570251 92570479 92570251 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92570638 92570804 92570638 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92570967 92571176 92570967 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92572187 92572366 92572187 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92572425 92572601 92572425 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92573739 92574179 92573739 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 CDS 92574520 92574810 92574520 ID=Msa0388210-mRNA-1:cds;Parent=Msa0388210-mRNA-1
chr3_1 three_prime_UTR 92574811 92575236 92574811 ID=Msa0388210-mRNA-1:three_prime_utr;Parent=Msa0388210-mRNA-1
Gene Sequence

>Msa0388210

ATGGCTCCTGCACCACCGCAATCTAATCGATCTCCTTCGCCGTCGCAACCGTCCGGGAAGAGTGAAGTATCTGATCTAAAATTACAGCTACGGCAGCTTGCTGGGAGTCGAGCTCCGGGTACTGATGACTCTAAGAGGGATCTTTACAAGAAGGTGATATCAAACATGACTATAGGTATTGATGTTTCGTCTCTCTTTGGTGAGATGGTAATGTGTTCAGCAACATCAGACATTGTTTTGAAGAAAATGTGTTACCTGTATGTTGGAAACTATGCTAAGGTTAATCCGGATCTTGCTCTTTTGACGATTAATTTTCTTCAAAGGGATTGTAAGGATCAGGATCCGATGATCCGAGGACTGGCATTAAGGAGTTTGTGTTCACTTCGAGTGGCGAACTTGGTGGAGTATTTGGTTGGGCCTTTAGGGTCAGGGTTGAAGGATAATAATAGTTATGTCAGGACGGTGGCAGTAATCGGTGTTTTGAAACTGTATCACATATCAGCCTCCACGTGTATTGATGCAGATTTTCCAGAAACGTTGAAGCATTTGATGCTCAATGACCAGGATACTCAGGTAGTTGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCAACCACCTCAGAGGAAGCAGCTAGGGAGAGAGAAACTCTGCATAGCAAGCCAATTGTTTATTACCTTCTGAATCGCATTAAGGAATTTAGTGAATGGGCACAATGTCTTGTGATGGAATTGGTGGCCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTCCTTGAAGATAGACTACAGCATGCAAATGGTGCTGTTGTCTTGGCAACTACAAAAGTATTCCTGCACTTGACTTTATCTATGGCTGATGTACATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCGGAACAATCTTATGCAATTCTAAGCCACCTGCATCTCTTGGTAATGCGTGCACCATATATATTTTCCTCGGACTACAAACACTTCTATTGCCAGTATAACGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACCTATGAGATAGTGACAGAATTATGTGAATATGCTGCAAATGTTGACATCCCAATTGCAAGGGAATCAATTCGGGCTGTTGGAAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGGCTTCTGCAGTTTCTGGAGATGGAAAAGGACTATGTTACGTCTGAAGCTCTGGTGCTTGTGAAAGATCTTCTAAGAAAATATCCTCAATGGAGTCAAGATTGTATTGCTGTTGTAGGGAATATCAGTAGCAACAATGTCCAAGAACCTAAGGCTAAGGCAGCTCTCATATGGATGCTGGGGGAATATTCTCAAGACATGCATGATGCTCCGTATGTCTTGGAAAGTCTGGTTGAAAATTGGGACGAGGAGCATTCTGCCGAGGTTCGCTTGCATCTTCTTACTGCAGTAATGAAGTGTTTCTTTAAGAGACCCCCGAGACTCAGAAAGCACTGGGAGCTGCACTGGCCGCTGGTCTTGCTGATTTTCACCAGGTTTGAGTTGTTATTTACTACTTACTATTTGAATTGTCAAAACAATGCGATTAGATATTTGTGGATAATAGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTACAACACAATGTATCGGTGGCTGAGAGTGTGGTGAACCCTCCAAAACAAGCAGTTTCCGTATTTGCTGATACTCAGAGCAGTGAAGTTAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCTTACATGTTCACTGATAAGGAACACCGAGGGACATTTGAGTTTTCAGATGAACTTGGCAATCTGTCTATTAGTGCGGAATCCGGAGATTCTGTTGTTCCTGCGCAGAGAGTGGAGGCAAATGACAAGGATCTGCTTCTAAGTACCACGGAAAAAGATGATGTGAGAGATACTGGAAGCAATGGTTCTGCCTATAATGCTCCTTCCTATAATGGGTCTGCCCCTTCAGCAGCTTCACAACCGCTTGCAGATTTGGCATTTTCAAGTACCAGCACGACTAGCCAAGCATTGGCAATTGATGATCTGCTTGGTTTAGATTTTTCAGTTGGGACTGTAAGCACACCGTCACCTCCCCCGTTGACCCTCAACCCAAAAGCTGTACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTACCAATATCCTTATCAGAGGAATATTCTTTAAGCCCTCTTGCAATTGCATCATTGACGACTCCCAATGCACTCCTACGGCACATGCAAAGTCATTCAATACAGTGCATTGCATCCGGCGGCCAGTCTCCTAATTTCAAGTTCTTTTTCTTTGCTCAAAAAGCAGAAGAAACATCAATATATCTTGTAGAGTGTATAATCAAGACATCATCCGCCAAGTCACAGATTAAAATAAAGGCTGATGACCAAAGCTCATCACAGGCATTCTCAACATTATTCCAATCAGCTTTGTCCAAATTTGGTTTGCCCTGA
Protein sequence

>Msa0388210

MAPAPPQSNRSPSPSQPSGKSEVSDLKLQLRQLAGSRAPGTDDSKRDLYKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPETLKHLMLNDQDTQVVANCLSALQEIWTLESTTSEEAARERETLHSKPIVYYLLNRIKEFSEWAQCLVMELVAKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSNNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPRLRKHWELHWPLVLLIFTRFELLFTTYYLNCQNNAIRYLWIIDVHDRALFYYRLLQHNVSVAESVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFSDELGNLSISAESGDSVVPAQRVEANDKDLLLSTTEKDDVRDTGSNGSAYNAPSYNGSAPSAASQPLADLAFSSTSTTSQALAIDDLLGLDFSVGTVSTPSPPPLTLNPKAVLDPGTFQQKWRQLPISLSEEYSLSPLAIASLTTPNALLRHMQSHSIQCIASGGQSPNFKFFFFAQKAEETSIYLVECIIKTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP*