AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0358890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0358890 MtrunA17_Chr3g0095921 86.352 381 10 2 3 341 12 392 0.0 657
Msa0358890 MtrunA17_Chr8g0334701 36.798 356 178 4 3 311 37 392 4.28e-73 231
Msa0358890 MtrunA17_Chr8g0337981 37.673 361 179 4 1 315 9 369 6.74e-69 220
Msa0358890 MtrunA17_Chr1g0150221 34.167 360 187 4 1 313 42 398 4.47e-66 214
Msa0358890 MtrunA17_Chr8g0390721 29.834 362 190 12 10 309 54 413 8.39e-38 139
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0358890 AT1G06550.1 62.803 371 95 3 4 331 13 383 3.01e-169 476
Msa0358890 AT5G65940.1 37.151 358 181 3 1 314 8 365 5.27e-80 249
Msa0358890 AT5G65940.4 37.151 358 181 3 1 314 8 365 5.27e-80 249
Msa0358890 AT2G30660.1 37.853 354 160 4 1 302 4 349 3.27e-75 236
Msa0358890 AT2G30650.1 37.960 353 171 4 2 308 5 355 2.48e-73 232
Msa0358890 AT5G65940.2 41.786 280 153 2 1 270 8 287 7.42e-73 229
Msa0358890 AT5G65940.3 38.110 328 159 3 1 284 8 335 1.15e-72 229
Msa0358890 AT2G30650.2 41.637 281 150 3 2 270 5 283 1.17e-67 216
Msa0358890 AT3G60510.1 36.782 348 173 4 13 313 48 395 3.79e-66 214
Msa0358890 AT4G31810.1 34.530 362 183 5 4 314 43 401 1.44e-65 213
Msa0358890 AT2G30660.2 36.308 325 147 4 30 302 1 317 3.61e-63 204
Msa0358890 AT3G60510.3 34.316 373 173 5 13 313 48 420 1.03e-60 201
Msa0358890 AT3G60510.2 39.179 268 153 2 13 270 48 315 3.67e-56 186
Msa0358890 AT4G13360.1 32.698 367 175 15 10 310 57 417 1.35e-44 158
Msa0358890 AT3G24360.2 29.640 361 190 11 10 310 54 410 1.05e-40 147
Msa0358890 AT3G24360.1 28.767 365 192 12 10 310 54 414 2.50e-37 139
Msa0358890 AT3G24360.6 28.522 291 146 9 79 310 2 289 4.42e-27 108
Msa0358890 AT3G24360.5 28.521 284 141 9 86 310 32 312 2.16e-26 107
Msa0358890 AT3G24360.3 28.521 284 141 9 86 310 30 310 2.77e-26 107
Msa0358890 AT3G24360.4 29.885 261 159 10 10 249 54 311 1.10e-23 100
Msa0358890 AT5G43280.2 27.861 201 125 6 15 202 23 216 3.79e-11 62.4
Msa0358890 AT5G43280.1 27.273 198 128 5 15 201 23 215 9.58e-11 62.0

Find 76 sgRNAs with CRISPR-Local

Find 1024 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATTTGTGTTTCTCTATT+TGG 0.130874 3_1:-44947591 None:intergenic
AACCTGCATTCCACACTTTC+TGG 0.177793 3_1:-44947441 None:intergenic
TCACTCAAGAGCAGCATTAA+AGG 0.236028 3_1:+44947819 Msa0358890:three_prime_UTR
AGCAGCATTAAAGGCCTCTT+TGG 0.261169 3_1:+44947828 Msa0358890:three_prime_UTR
ATATCTGCTAGCAGAATATT+TGG 0.264767 3_1:+44940583 Msa0358890:CDS
GCTGGTAGGGCTTTCTGTGC+TGG 0.297545 3_1:+44940781 Msa0358890:CDS
GCTACTCCTGAAGCAAGTTT+TGG 0.303462 3_1:+44941815 Msa0358890:CDS
CTTGAGTGATGTTTCCCCTT+TGG 0.310752 3_1:-44947805 None:intergenic
CGCTTGCTTAGCTTAAATTC+TGG 0.324743 3_1:+44945717 Msa0358890:CDS
ATCATTGTAATTACTTGTTT+AGG 0.326391 3_1:-44945809 None:intergenic
TCAGGAACCTCATATATAAA+TGG 0.327510 3_1:-44947680 None:intergenic
AATATAAATTAAAATTGTTC+AGG 0.350934 3_1:-44947698 None:intergenic
TACTATCATTCTCGTTTGCC+AGG 0.369194 3_1:+44941863 Msa0358890:CDS
ATGGTTAGGTCCAGCTTTAA+AGG 0.388941 3_1:+44946102 Msa0358890:CDS
GTTACAAGTGAGAATTTCAA+TGG 0.395955 3_1:-44941662 None:intergenic
TGAAGAAATTATAAAATCAT+TGG 0.398750 3_1:+44945953 Msa0358890:CDS
TCAGTGTCCATTTATATATG+AGG 0.402121 3_1:+44947673 Msa0358890:three_prime_UTR
GAGATAGCATTCAACTGCTT+TGG 0.402603 3_1:-44940421 None:intergenic
TGAAATCCAAAACTTGCTTC+AGG 0.406236 3_1:-44941821 None:intergenic
TATTATTAAAAGAGGTTAGC+TGG 0.409485 3_1:+44947717 Msa0358890:three_prime_UTR
GAGAAGAGATAGACCATGTA+AGG 0.415250 3_1:+44940380 Msa0358890:CDS
TTAATTTATATTATTAAAAG+AGG 0.416893 3_1:+44947709 Msa0358890:three_prime_UTR
GGAATTAGTTGCGGCTGGAC+TGG 0.425198 3_1:+44942254 Msa0358890:CDS
GGGGATTTGAGAGTATTCTA+TGG 0.430649 3_1:+44940805 Msa0358890:CDS
TGGTTAGGTCCAGCTTTAAA+GGG 0.432888 3_1:+44946103 Msa0358890:CDS
AGCAGATATAATTATCTTGA+AGG 0.433172 3_1:+44940628 Msa0358890:CDS
AGCTCTAATTCTTTGTCAAA+AGG 0.436167 3_1:-44947411 None:intergenic
AAAGAAGGAAATGGATGGTT+AGG 0.436849 3_1:+44946088 Msa0358890:CDS
GTAGGGCTTTCTGTGCTGGA+GGG 0.445553 3_1:+44940785 Msa0358890:CDS
GAATCAAGCAAAGAAGGAAA+TGG 0.445684 3_1:+44946079 Msa0358890:CDS
TCTTGTCCATGGAATTTCAA+TGG 0.455048 3_1:+44941616 Msa0358890:CDS
AAAATCTGTACACCACTTCA+AGG 0.458689 3_1:-44941426 None:intergenic
TTCCAGAAAGTGTGGAATGC+AGG 0.460339 3_1:+44947439 Msa0358890:CDS
TGGAGCATTGTCCTTGTCAA+TGG 0.461725 3_1:-44947113 None:intergenic
CAAAGTAGATGATGAGAAGT+TGG 0.466200 3_1:+44947374 Msa0358890:CDS
AGGGTGGACTTTACCAGGTC+AGG 0.467947 3_1:-44940445 None:intergenic
CTTACTGGAGCACGGTTGAA+TGG 0.470855 3_1:+44942228 Msa0358890:intron
CTTGTCCATGGAATTTCAAT+GGG 0.476159 3_1:+44941617 Msa0358890:CDS
CATCAGGTTGCTCTTGTCCA+TGG 0.477425 3_1:+44941605 Msa0358890:intron
TTTGGATTTCATACTGATTG+TGG 0.478255 3_1:+44941833 Msa0358890:CDS
TGTTTCCTCTAGTTTCCAAA+GGG 0.504083 3_1:+44947790 Msa0358890:intron
GGAAAGGAATTAGTTGCGGC+TGG 0.504298 3_1:+44942249 Msa0358890:CDS
TAAGCTCAAAACACAAGGTA+TGG 0.509900 3_1:-44947986 None:intergenic
GAAGCTGAATCAAGCAAAGA+AGG 0.513547 3_1:+44946073 Msa0358890:CDS
CTCCACCCATTGAAATTCCA+TGG 0.515087 3_1:-44941622 None:intergenic
TATATGTGAGACTATTTGAA+AGG 0.518317 3_1:+44947882 Msa0358890:three_prime_UTR
TCTTATAGGTACTAATGTGA+TGG 0.519860 3_1:-44941459 None:intergenic
TCAAAGTAATTACCCTTACA+TGG 0.526473 3_1:-44940393 None:intergenic
TAGGGCTTTCTGTGCTGGAG+GGG 0.527824 3_1:+44940786 Msa0358890:CDS
GGTAGGGCTTTCTGTGCTGG+AGG 0.528264 3_1:+44940784 Msa0358890:CDS
ATATGTGAGACTATTTGAAA+GGG 0.535566 3_1:+44947883 Msa0358890:three_prime_UTR
TTAATTTCAAACAGGTGGGA+TGG 0.538435 3_1:+44947540 Msa0358890:intron
TCATCTACTTTGTCAAGTGA+TGG 0.540491 3_1:-44947363 None:intergenic
GTCCATGGAATTTCAATGGG+TGG 0.557121 3_1:+44941620 Msa0358890:CDS
TTACAAGTGAGAATTTCAAT+GGG 0.561512 3_1:-44941661 None:intergenic
GAATGCTATCTCACCTGACC+TGG 0.565041 3_1:+44940432 Msa0358890:CDS
AATTGATGAGTGTTTCTCAA+AGG 0.565328 3_1:+44945923 Msa0358890:CDS
TCAAATAAACTAATCCAAAG+AGG 0.568061 3_1:-44947842 None:intergenic
ATGTTTCCTCTAGTTTCCAA+AGG 0.570688 3_1:+44947789 Msa0358890:intron
ACTATCATTCTCGTTTGCCA+GGG 0.586309 3_1:+44941864 Msa0358890:CDS
GCTTCAGATTCCAGAAAGTG+TGG 0.599115 3_1:+44947431 Msa0358890:CDS
ATTGAAAATAGCATTAAGAT+CGG 0.603251 3_1:+44946150 Msa0358890:CDS
GCTCAAAACACAAGGTATGG+AGG 0.609426 3_1:-44947983 None:intergenic
TGACAAGGACAATGCTCCAA+AGG 0.609649 3_1:+44947117 Msa0358890:CDS
GAATGGAAAGGAATTAGTTG+CGG 0.611054 3_1:+44942245 Msa0358890:CDS
TGGAGCACGGTTGAATGGAA+AGG 0.612770 3_1:+44942233 Msa0358890:intron
TCTACTTTGTCAAGTGATGG+AGG 0.616670 3_1:-44947360 None:intergenic
CAAGCAAAGAAGGAAATGGA+TGG 0.625108 3_1:+44946083 Msa0358890:CDS
CATGGAATTTCAATGGGTGG+AGG 0.625143 3_1:+44941623 Msa0358890:CDS
GACCCTAAGCTCAAAACACA+AGG 0.643033 3_1:-44947991 None:intergenic
GATTTGAGAGTATTCTATGG+TGG 0.656652 3_1:+44940808 Msa0358890:CDS
GTTTCCTCTAGTTTCCAAAG+GGG 0.660187 3_1:+44947791 Msa0358890:intron
AGGGGATTCATGCCTTGAAG+TGG 0.660397 3_1:+44941414 Msa0358890:intron
TAGTACCTATAAGAAAACTC+AGG 0.673028 3_1:+44941468 Msa0358890:CDS
AGAAGAGATAGACCATGTAA+GGG 0.680019 3_1:+44940381 Msa0358890:CDS
TAGAGCTCTCACCATTGACA+AGG 0.688831 3_1:+44947102 Msa0358890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTGTATTTATTTTTTAAA+TGG + chr3_1:44939655-44939674 Msa0358890:intron 10.0%
!! GAAAATATATAATAACTAAT+AGG - chr3_1:44940702-44940721 None:intergenic 10.0%
!!! TATAACTAATTGTTATTTTT+AGG + chr3_1:44940756-44940775 Msa0358890:intron 10.0%
!!! ATAACTAATTGTTATTTTTA+GGG + chr3_1:44940757-44940776 Msa0358890:intron 10.0%
!! AATGAAATATTTCATAAATT+AGG + chr3_1:44941948-44941967 Msa0358890:intron 10.0%
!!! TGTTAAATTTTTTTTTTGAA+GGG + chr3_1:44945041-44945060 Msa0358890:intron 10.0%
!! TAATTATTATTGAAACAAAA+AGG - chr3_1:44945108-44945127 None:intergenic 10.0%
!! TAAATAAAATAAACTAAATC+AGG + chr3_1:44946628-44946647 Msa0358890:intron 10.0%
!!! TTTGAAATTAAAATGAATTT+TGG - chr3_1:44947531-44947550 None:intergenic 10.0%
!! AATATAAATTAAAATTGTTC+AGG - chr3_1:44947701-44947720 None:intergenic 10.0%
!!! GTTTGTATTTATTTTTTAAA+TGG + chr3_1:44939655-44939674 Msa0358890:intron 10.0%
!! GAAAATATATAATAACTAAT+AGG - chr3_1:44940702-44940721 None:intergenic 10.0%
!!! TATAACTAATTGTTATTTTT+AGG + chr3_1:44940756-44940775 Msa0358890:intron 10.0%
!!! ATAACTAATTGTTATTTTTA+GGG + chr3_1:44940757-44940776 Msa0358890:intron 10.0%
!! AATGAAATATTTCATAAATT+AGG + chr3_1:44941948-44941967 Msa0358890:intron 10.0%
!!! TGTTAAATTTTTTTTTTGAA+GGG + chr3_1:44945041-44945060 Msa0358890:intron 10.0%
!! TAATTATTATTGAAACAAAA+AGG - chr3_1:44945108-44945127 None:intergenic 10.0%
!! TAAATAAAATAAACTAAATC+AGG + chr3_1:44946628-44946647 Msa0358890:intron 10.0%
!!! TTTGAAATTAAAATGAATTT+TGG - chr3_1:44947531-44947550 None:intergenic 10.0%
!! AATATAAATTAAAATTGTTC+AGG - chr3_1:44947701-44947720 None:intergenic 10.0%
!! ACTAATATTCAAACAATATA+TGG + chr3_1:44940305-44940324 Msa0358890:intron 15.0%
!! TACAAAATCAAAATTCAAAA+TGG - chr3_1:44940349-44940368 None:intergenic 15.0%
!!! ATTTTGAATTTTGATTTTGT+AGG + chr3_1:44940348-44940367 Msa0358890:intron 15.0%
!! AATATATTACTATTCAAAAG+AGG - chr3_1:44941384-44941403 None:intergenic 15.0%
!! AAATATTTAATTGATACACA+TGG - chr3_1:44942096-44942115 None:intergenic 15.0%
!!! AAGAATTTTTAAGTTTCTTT+CGG - chr3_1:44944033-44944052 None:intergenic 15.0%
!!! ATTATCAGAATTTTAAGATT+GGG - chr3_1:44944098-44944117 None:intergenic 15.0%
!! AACTGTTAAATCTTAATTAA+AGG + chr3_1:44944983-44945002 Msa0358890:intron 15.0%
!!! CTGTTAAATTTTTTTTTTGA+AGG + chr3_1:44945040-44945059 Msa0358890:intron 15.0%
!! TAATTAATTCTATATTTGCA+TGG - chr3_1:44945330-44945349 None:intergenic 15.0%
!!! TGTTTTTTAATTTTCTTTTC+AGG - chr3_1:44945533-44945552 None:intergenic 15.0%
!!! AGAAGTAAAATTTATTTTGT+AGG + chr3_1:44945555-44945574 Msa0358890:intron 15.0%
!!! TTTAATATGGATTAATTGTT+TGG + chr3_1:44945582-44945601 Msa0358890:intron 15.0%
!! TGAAGAAATTATAAAATCAT+TGG + chr3_1:44945953-44945972 Msa0358890:CDS 15.0%
!!! TTCATTGTCATTTTATTTTA+AGG + chr3_1:44947075-44947094 Msa0358890:intron 15.0%
!!! TCATTGTCATTTTATTTTAA+GGG + chr3_1:44947076-44947095 Msa0358890:intron 15.0%
!!! ATAAGTTGAAGAAAAAAAAA+AGG - chr3_1:44947495-44947514 None:intergenic 15.0%
!!! AATTCATTTTAATTTCAAAC+AGG + chr3_1:44947532-44947551 Msa0358890:intron 15.0%
!!! AGATTATAAAAACATCATTT+TGG + chr3_1:44947952-44947971 Msa0358890:three_prime_UTR 15.0%
!! ACTAATATTCAAACAATATA+TGG + chr3_1:44940305-44940324 Msa0358890:intron 15.0%
!! TACAAAATCAAAATTCAAAA+TGG - chr3_1:44940349-44940368 None:intergenic 15.0%
!!! ATTTTGAATTTTGATTTTGT+AGG + chr3_1:44940348-44940367 Msa0358890:intron 15.0%
!! AATATATTACTATTCAAAAG+AGG - chr3_1:44941384-44941403 None:intergenic 15.0%
!! AAATATTTAATTGATACACA+TGG - chr3_1:44942096-44942115 None:intergenic 15.0%
!!! AAGAATTTTTAAGTTTCTTT+CGG - chr3_1:44944033-44944052 None:intergenic 15.0%
!!! ATTATCAGAATTTTAAGATT+GGG - chr3_1:44944098-44944117 None:intergenic 15.0%
!! AACTGTTAAATCTTAATTAA+AGG + chr3_1:44944983-44945002 Msa0358890:intron 15.0%
!!! CTGTTAAATTTTTTTTTTGA+AGG + chr3_1:44945040-44945059 Msa0358890:intron 15.0%
!! TAATTAATTCTATATTTGCA+TGG - chr3_1:44945330-44945349 None:intergenic 15.0%
!!! TGTTTTTTAATTTTCTTTTC+AGG - chr3_1:44945533-44945552 None:intergenic 15.0%
!!! AGAAGTAAAATTTATTTTGT+AGG + chr3_1:44945555-44945574 Msa0358890:intron 15.0%
!!! TTTAATATGGATTAATTGTT+TGG + chr3_1:44945582-44945601 Msa0358890:intron 15.0%
!! TGAAGAAATTATAAAATCAT+TGG + chr3_1:44945953-44945972 Msa0358890:CDS 15.0%
!!! TTCATTGTCATTTTATTTTA+AGG + chr3_1:44947075-44947094 Msa0358890:intron 15.0%
!!! TCATTGTCATTTTATTTTAA+GGG + chr3_1:44947076-44947095 Msa0358890:intron 15.0%
!!! ATAAGTTGAAGAAAAAAAAA+AGG - chr3_1:44947495-44947514 None:intergenic 15.0%
!!! AATTCATTTTAATTTCAAAC+AGG + chr3_1:44947532-44947551 Msa0358890:intron 15.0%
!!! AGATTATAAAAACATCATTT+TGG + chr3_1:44947952-44947971 Msa0358890:three_prime_UTR 15.0%
!! AAAATCACAACAAATTTACA+TGG - chr3_1:44940194-44940213 None:intergenic 20.0%
!! ATATTCAAACAATATATGGT+TGG + chr3_1:44940309-44940328 Msa0358890:intron 20.0%
!!! TATGGTTGGTAAATTAATAA+TGG + chr3_1:44940323-44940342 Msa0358890:intron 20.0%
!!! CAATTTTCAACAATTTCAAA+GGG - chr3_1:44940672-44940691 None:intergenic 20.0%
!!! TCAATTTTCAACAATTTCAA+AGG - chr3_1:44940673-44940692 None:intergenic 20.0%
!! TCTATGAACAAAAAAATAAC+AGG - chr3_1:44940724-44940743 None:intergenic 20.0%
!! TATTTCCAACATTATCTTAT+AGG - chr3_1:44940925-44940944 None:intergenic 20.0%
!!! CTTTTTTCTTATAATACTAC+TGG - chr3_1:44941027-44941046 None:intergenic 20.0%
!!! TATACTTTATTTCTCTCATT+AGG - chr3_1:44941339-44941358 None:intergenic 20.0%
!! TAATGAGAGAAATAAAGTAT+AGG + chr3_1:44941338-44941357 Msa0358890:intron 20.0%
!! TAATATATTTCTTCTTGACA+GGG + chr3_1:44941395-44941414 Msa0358890:intron 20.0%
!!! CAAAGCATTTTTTGAAATTT+AGG - chr3_1:44941785-44941804 None:intergenic 20.0%
!!! ATCTATTGTTTTAGAATTGA+GGG - chr3_1:44942014-44942033 None:intergenic 20.0%
!!! AATCTATTGTTTTAGAATTG+AGG - chr3_1:44942015-44942034 None:intergenic 20.0%
!! AAAAATACGATATATCTTTG+AGG + chr3_1:44942504-44942523 Msa0358890:intron 20.0%
!! AAGGTTTAATACTTCAATTA+TGG + chr3_1:44942759-44942778 Msa0358890:intron 20.0%
!! TTTAATACTTCAATTATGGA+TGG + chr3_1:44942763-44942782 Msa0358890:intron 20.0%
!! AATTTCACTACTATATTCTA+AGG - chr3_1:44942925-44942944 None:intergenic 20.0%
!! ATACATTAGATACAATGATA+TGG + chr3_1:44943240-44943259 Msa0358890:intron 20.0%
!! TATACTCCAATATATCTTAA+GGG + chr3_1:44943318-44943337 Msa0358890:intron 20.0%
!! TCTAAATTTATTATCTATGC+CGG + chr3_1:44943694-44943713 Msa0358890:intron 20.0%
!!! AGAATTTTTAAGTTTCTTTC+GGG - chr3_1:44944032-44944051 None:intergenic 20.0%
!!! GATTATCAGAATTTTAAGAT+TGG - chr3_1:44944099-44944118 None:intergenic 20.0%
!!! AAATAAGGATCATCTTTTTT+TGG + chr3_1:44944365-44944384 Msa0358890:intron 20.0%
!! CTAAAATAATTAAAGGAGTT+TGG + chr3_1:44944877-44944896 Msa0358890:intron 20.0%
!! AAAGTGAGTTAATTAGAATA+TGG + chr3_1:44945466-44945485 Msa0358890:intron 20.0%
!!! TTTTGTAGGACATTTTAATA+TGG + chr3_1:44945569-44945588 Msa0358890:intron 20.0%
!! GCAAGAAATAAAATTTAAAG+AGG + chr3_1:44945607-44945626 Msa0358890:intron 20.0%
!! ATCATTGTAATTACTTGTTT+AGG - chr3_1:44945812-44945831 None:intergenic 20.0%
!! ATTGAAAATAGCATTAAGAT+CGG + chr3_1:44946150-44946169 Msa0358890:CDS 20.0%
!!! AAGACAGTATTTTTACTTAT+CGG - chr3_1:44946838-44946857 None:intergenic 20.0%
!!! CTATAATAAATTTTGACAGA+AGG + chr3_1:44946993-44947012 Msa0358890:intron 20.0%
!! TAAATAATTTACTTGTTCAG+TGG + chr3_1:44947334-44947353 Msa0358890:intron 20.0%
!! AAATAATTTACTTGTTCAGT+GGG + chr3_1:44947335-44947354 Msa0358890:intron 20.0%
!! AAAATCACAACAAATTTACA+TGG - chr3_1:44940194-44940213 None:intergenic 20.0%
!! ATATTCAAACAATATATGGT+TGG + chr3_1:44940309-44940328 Msa0358890:intron 20.0%
!!! TATGGTTGGTAAATTAATAA+TGG + chr3_1:44940323-44940342 Msa0358890:intron 20.0%
!!! CAATTTTCAACAATTTCAAA+GGG - chr3_1:44940672-44940691 None:intergenic 20.0%
!!! TCAATTTTCAACAATTTCAA+AGG - chr3_1:44940673-44940692 None:intergenic 20.0%
!! TCTATGAACAAAAAAATAAC+AGG - chr3_1:44940724-44940743 None:intergenic 20.0%
!! TATTTCCAACATTATCTTAT+AGG - chr3_1:44940925-44940944 None:intergenic 20.0%
!!! CTTTTTTCTTATAATACTAC+TGG - chr3_1:44941027-44941046 None:intergenic 20.0%
!!! TATACTTTATTTCTCTCATT+AGG - chr3_1:44941339-44941358 None:intergenic 20.0%
!! TAATGAGAGAAATAAAGTAT+AGG + chr3_1:44941338-44941357 Msa0358890:intron 20.0%
!! TAATATATTTCTTCTTGACA+GGG + chr3_1:44941395-44941414 Msa0358890:intron 20.0%
!!! CAAAGCATTTTTTGAAATTT+AGG - chr3_1:44941785-44941804 None:intergenic 20.0%
!!! ATCTATTGTTTTAGAATTGA+GGG - chr3_1:44942014-44942033 None:intergenic 20.0%
!!! AATCTATTGTTTTAGAATTG+AGG - chr3_1:44942015-44942034 None:intergenic 20.0%
!! AAAAATACGATATATCTTTG+AGG + chr3_1:44942504-44942523 Msa0358890:intron 20.0%
!! AAGGTTTAATACTTCAATTA+TGG + chr3_1:44942759-44942778 Msa0358890:intron 20.0%
!! TTTAATACTTCAATTATGGA+TGG + chr3_1:44942763-44942782 Msa0358890:intron 20.0%
!! AATTTCACTACTATATTCTA+AGG - chr3_1:44942925-44942944 None:intergenic 20.0%
!! ATACATTAGATACAATGATA+TGG + chr3_1:44943240-44943259 Msa0358890:intron 20.0%
!! TATACTCCAATATATCTTAA+GGG + chr3_1:44943318-44943337 Msa0358890:intron 20.0%
!! TCTAAATTTATTATCTATGC+CGG + chr3_1:44943694-44943713 Msa0358890:intron 20.0%
!!! AGAATTTTTAAGTTTCTTTC+GGG - chr3_1:44944032-44944051 None:intergenic 20.0%
!!! GATTATCAGAATTTTAAGAT+TGG - chr3_1:44944099-44944118 None:intergenic 20.0%
!!! AAATAAGGATCATCTTTTTT+TGG + chr3_1:44944365-44944384 Msa0358890:intron 20.0%
!! CTAAAATAATTAAAGGAGTT+TGG + chr3_1:44944877-44944896 Msa0358890:intron 20.0%
!! AAAGTGAGTTAATTAGAATA+TGG + chr3_1:44945466-44945485 Msa0358890:intron 20.0%
!!! TTTTGTAGGACATTTTAATA+TGG + chr3_1:44945569-44945588 Msa0358890:intron 20.0%
!! GCAAGAAATAAAATTTAAAG+AGG + chr3_1:44945607-44945626 Msa0358890:intron 20.0%
!! ATCATTGTAATTACTTGTTT+AGG - chr3_1:44945812-44945831 None:intergenic 20.0%
!! ATTGAAAATAGCATTAAGAT+CGG + chr3_1:44946150-44946169 Msa0358890:CDS 20.0%
!!! AAGACAGTATTTTTACTTAT+CGG - chr3_1:44946838-44946857 None:intergenic 20.0%
!!! CTATAATAAATTTTGACAGA+AGG + chr3_1:44946993-44947012 Msa0358890:intron 20.0%
!! TAAATAATTTACTTGTTCAG+TGG + chr3_1:44947334-44947353 Msa0358890:intron 20.0%
!! AAATAATTTACTTGTTCAGT+GGG + chr3_1:44947335-44947354 Msa0358890:intron 20.0%
!!! ATTTTTAAGTCACCAGAAAA+TGG - chr3_1:44939778-44939797 None:intergenic 25.0%
! TTGCAATTACAAAGACAATA+AGG - chr3_1:44940048-44940067 None:intergenic 25.0%
! TTTGAATATTAGTGTCTGTT+TGG - chr3_1:44940298-44940317 None:intergenic 25.0%
! AATAATTTCAAGGTTGAGTA+GGG - chr3_1:44940467-44940486 None:intergenic 25.0%
! AAATAATTTCAAGGTTGAGT+AGG - chr3_1:44940468-44940487 None:intergenic 25.0%
! TTTAATCTTTGAATCCAATC+AGG + chr3_1:44940559-44940578 Msa0358890:intron 25.0%
! TAGCAGAATATTTGGAAAAA+TGG + chr3_1:44940591-44940610 Msa0358890:CDS 25.0%
! AGCAGAATATTTGGAAAAAT+GGG + chr3_1:44940592-44940611 Msa0358890:CDS 25.0%
! AGCAGATATAATTATCTTGA+AGG + chr3_1:44940628-44940647 Msa0358890:CDS 25.0%
!! TCATTCTCTATAGGATTTTT+AGG + chr3_1:44940851-44940870 Msa0358890:intron 25.0%
!! ATTAGCCTATAAGATAATGT+TGG + chr3_1:44940917-44940936 Msa0358890:intron 25.0%
! ATTTCTCTCATTAGGTTTAT+TGG - chr3_1:44941331-44941350 None:intergenic 25.0%
! GTAATATATTTCTTCTTGAC+AGG + chr3_1:44941394-44941413 Msa0358890:intron 25.0%
! AATATATTTCTTCTTGACAG+GGG + chr3_1:44941396-44941415 Msa0358890:intron 25.0%
!! AAAGTCTCATGTTTTCTAAA+TGG + chr3_1:44941567-44941586 Msa0358890:intron 25.0%
!! AAGTCTCATGTTTTCTAAAT+GGG + chr3_1:44941568-44941587 Msa0358890:intron 25.0%
! TTACAAGTGAGAATTTCAAT+GGG - chr3_1:44941664-44941683 None:intergenic 25.0%
!!! TTATTCGTCTAAAACCTTTT+TGG + chr3_1:44941720-44941739 Msa0358890:intron 25.0%
! ATTTCAAAAAATGCTTTGAC+AGG + chr3_1:44941787-44941806 Msa0358890:intron 25.0%
! ATCTTACTCATCAATAGTTA+TGG + chr3_1:44942134-44942153 Msa0358890:intron 25.0%
! TCAATAGTTATGGAACTTTA+AGG + chr3_1:44942144-44942163 Msa0358890:intron 25.0%
! CGAAATACTTGAATTTACTA+GGG - chr3_1:44942422-44942441 None:intergenic 25.0%
! TCGAAATACTTGAATTTACT+AGG - chr3_1:44942423-44942442 None:intergenic 25.0%
! GTATAGTTTAAACACAGTTA+GGG - chr3_1:44942588-44942607 None:intergenic 25.0%
! CTCAAGAAAAATAAGTCTAA+AGG - chr3_1:44942629-44942648 None:intergenic 25.0%
! TTGTAGCATGAGAAAAAATA+GGG - chr3_1:44942882-44942901 None:intergenic 25.0%
! TTTGTAGCATGAGAAAAAAT+AGG - chr3_1:44942883-44942902 None:intergenic 25.0%
! AAAATCCTAAAAAACACAGT+GGG + chr3_1:44943069-44943088 Msa0358890:intron 25.0%
!!! ACATCTTTTAAGAGAATAGA+TGG + chr3_1:44943176-44943195 Msa0358890:intron 25.0%
! ATATATTGGAGTATACACTT+GGG - chr3_1:44943313-44943332 None:intergenic 25.0%
! GTATACTCCAATATATCTTA+AGG + chr3_1:44943317-44943336 Msa0358890:intron 25.0%
! TCAAATAAGTCAATTCAAAC+AGG - chr3_1:44943344-44943363 None:intergenic 25.0%
! AATTAACTGTTTATCCAAAG+AGG + chr3_1:44943542-44943561 Msa0358890:intron 25.0%
! ATTAACTGTTTATCCAAAGA+GGG + chr3_1:44943543-44943562 Msa0358890:intron 25.0%
! TTCAATGTAATTACATGTGT+CGG - chr3_1:44943663-44943682 None:intergenic 25.0%
! GCTTATTATATCAGTTTGAA+AGG - chr3_1:44944150-44944169 None:intergenic 25.0%
! ACTGATATAATAAGCAGTAA+CGG + chr3_1:44944155-44944174 Msa0358890:intron 25.0%
! AATATTGAATACAAAGCAAG+GGG - chr3_1:44944187-44944206 None:intergenic 25.0%
! GAATATTGAATACAAAGCAA+GGG - chr3_1:44944188-44944207 None:intergenic 25.0%
! AGAATATTGAATACAAAGCA+AGG - chr3_1:44944189-44944208 None:intergenic 25.0%
!!! ATATCCCAAACTTTGAAATA+AGG + chr3_1:44944350-44944369 Msa0358890:intron 25.0%
!! TGATCCTTATTTCAAAGTTT+GGG - chr3_1:44944357-44944376 None:intergenic 25.0%
!! ATGATCCTTATTTCAAAGTT+TGG - chr3_1:44944358-44944377 None:intergenic 25.0%
! AGGGAGATTCAAATTTAAAT+GGG + chr3_1:44944623-44944642 Msa0358890:intron 25.0%
! AGATTCAAATTTAAATGGGT+TGG + chr3_1:44944627-44944646 Msa0358890:intron 25.0%
!!! AGTCACAAGTTTTTTGATAT+GGG + chr3_1:44945150-44945169 Msa0358890:intron 25.0%
!!! TCCATAATTTTTGTTTCCAT+TGG + chr3_1:44945238-44945257 Msa0358890:intron 25.0%
! TCCAATGGAAACAAAAATTA+TGG - chr3_1:44945242-44945261 None:intergenic 25.0%
!! TGCGATTTTTATATGAAACT+TGG - chr3_1:44945283-44945302 None:intergenic 25.0%
! AATTCTATATTTGCATGGAA+CGG - chr3_1:44945325-44945344 None:intergenic 25.0%
! TTAACTTATCTCTCATTTAG+TGG - chr3_1:44945444-44945463 None:intergenic 25.0%
!!! AAAGAAAGTAGTTTTAGAAG+AGG - chr3_1:44946343-44946362 None:intergenic 25.0%
! TAGTAGAAAATCACTGTAAT+TGG - chr3_1:44946601-44946620 None:intergenic 25.0%
!!! TTCATTTTTCTGTATACTCT+TGG + chr3_1:44946726-44946745 Msa0358890:intron 25.0%
! GATAAGTAAAAATACTGTCT+TGG + chr3_1:44946837-44946856 Msa0358890:intron 25.0%
!!! TCATTTTAATTTCAAACAGG+TGG + chr3_1:44947535-44947554 Msa0358890:intron 25.0%
!!! CATTTTAATTTCAAACAGGT+GGG + chr3_1:44947536-44947555 Msa0358890:intron 25.0%
! GATATTTGTGTTTCTCTATT+TGG - chr3_1:44947594-44947613 None:intergenic 25.0%
! AGAAATCCATGAAAGATATT+TGG - chr3_1:44947646-44947665 None:intergenic 25.0%
! TATTATTAAAAGAGGTTAGC+TGG + chr3_1:44947717-44947736 Msa0358890:three_prime_UTR 25.0%
! TCAAATAAACTAATCCAAAG+AGG - chr3_1:44947845-44947864 None:intergenic 25.0%
! TATATGTGAGACTATTTGAA+AGG + chr3_1:44947882-44947901 Msa0358890:three_prime_UTR 25.0%
! ATATGTGAGACTATTTGAAA+GGG + chr3_1:44947883-44947902 Msa0358890:three_prime_UTR 25.0%
!!! ATTTTTAAGTCACCAGAAAA+TGG - chr3_1:44939778-44939797 None:intergenic 25.0%
! TTGCAATTACAAAGACAATA+AGG - chr3_1:44940048-44940067 None:intergenic 25.0%
! TTTGAATATTAGTGTCTGTT+TGG - chr3_1:44940298-44940317 None:intergenic 25.0%
! AATAATTTCAAGGTTGAGTA+GGG - chr3_1:44940467-44940486 None:intergenic 25.0%
! AAATAATTTCAAGGTTGAGT+AGG - chr3_1:44940468-44940487 None:intergenic 25.0%
! TTTAATCTTTGAATCCAATC+AGG + chr3_1:44940559-44940578 Msa0358890:intron 25.0%
! TAGCAGAATATTTGGAAAAA+TGG + chr3_1:44940591-44940610 Msa0358890:CDS 25.0%
! AGCAGAATATTTGGAAAAAT+GGG + chr3_1:44940592-44940611 Msa0358890:CDS 25.0%
! AGCAGATATAATTATCTTGA+AGG + chr3_1:44940628-44940647 Msa0358890:CDS 25.0%
!! TCATTCTCTATAGGATTTTT+AGG + chr3_1:44940851-44940870 Msa0358890:intron 25.0%
!! ATTAGCCTATAAGATAATGT+TGG + chr3_1:44940917-44940936 Msa0358890:intron 25.0%
! ATTTCTCTCATTAGGTTTAT+TGG - chr3_1:44941331-44941350 None:intergenic 25.0%
! GTAATATATTTCTTCTTGAC+AGG + chr3_1:44941394-44941413 Msa0358890:intron 25.0%
! AATATATTTCTTCTTGACAG+GGG + chr3_1:44941396-44941415 Msa0358890:intron 25.0%
!! AAAGTCTCATGTTTTCTAAA+TGG + chr3_1:44941567-44941586 Msa0358890:intron 25.0%
!! AAGTCTCATGTTTTCTAAAT+GGG + chr3_1:44941568-44941587 Msa0358890:intron 25.0%
! TTACAAGTGAGAATTTCAAT+GGG - chr3_1:44941664-44941683 None:intergenic 25.0%
!!! TTATTCGTCTAAAACCTTTT+TGG + chr3_1:44941720-44941739 Msa0358890:intron 25.0%
! ATTTCAAAAAATGCTTTGAC+AGG + chr3_1:44941787-44941806 Msa0358890:intron 25.0%
! ATCTTACTCATCAATAGTTA+TGG + chr3_1:44942134-44942153 Msa0358890:intron 25.0%
! TCAATAGTTATGGAACTTTA+AGG + chr3_1:44942144-44942163 Msa0358890:intron 25.0%
! CGAAATACTTGAATTTACTA+GGG - chr3_1:44942422-44942441 None:intergenic 25.0%
! TCGAAATACTTGAATTTACT+AGG - chr3_1:44942423-44942442 None:intergenic 25.0%
! GTATAGTTTAAACACAGTTA+GGG - chr3_1:44942588-44942607 None:intergenic 25.0%
! CTCAAGAAAAATAAGTCTAA+AGG - chr3_1:44942629-44942648 None:intergenic 25.0%
! TTGTAGCATGAGAAAAAATA+GGG - chr3_1:44942882-44942901 None:intergenic 25.0%
! TTTGTAGCATGAGAAAAAAT+AGG - chr3_1:44942883-44942902 None:intergenic 25.0%
! AAAATCCTAAAAAACACAGT+GGG + chr3_1:44943069-44943088 Msa0358890:intron 25.0%
!!! ACATCTTTTAAGAGAATAGA+TGG + chr3_1:44943176-44943195 Msa0358890:intron 25.0%
! ATATATTGGAGTATACACTT+GGG - chr3_1:44943313-44943332 None:intergenic 25.0%
! GTATACTCCAATATATCTTA+AGG + chr3_1:44943317-44943336 Msa0358890:intron 25.0%
! TCAAATAAGTCAATTCAAAC+AGG - chr3_1:44943344-44943363 None:intergenic 25.0%
! AATTAACTGTTTATCCAAAG+AGG + chr3_1:44943542-44943561 Msa0358890:intron 25.0%
! ATTAACTGTTTATCCAAAGA+GGG + chr3_1:44943543-44943562 Msa0358890:intron 25.0%
! TTCAATGTAATTACATGTGT+CGG - chr3_1:44943663-44943682 None:intergenic 25.0%
! GCTTATTATATCAGTTTGAA+AGG - chr3_1:44944150-44944169 None:intergenic 25.0%
! ACTGATATAATAAGCAGTAA+CGG + chr3_1:44944155-44944174 Msa0358890:intron 25.0%
! AATATTGAATACAAAGCAAG+GGG - chr3_1:44944187-44944206 None:intergenic 25.0%
! GAATATTGAATACAAAGCAA+GGG - chr3_1:44944188-44944207 None:intergenic 25.0%
! AGAATATTGAATACAAAGCA+AGG - chr3_1:44944189-44944208 None:intergenic 25.0%
!!! ATATCCCAAACTTTGAAATA+AGG + chr3_1:44944350-44944369 Msa0358890:intron 25.0%
!! TGATCCTTATTTCAAAGTTT+GGG - chr3_1:44944357-44944376 None:intergenic 25.0%
!! ATGATCCTTATTTCAAAGTT+TGG - chr3_1:44944358-44944377 None:intergenic 25.0%
! AGGGAGATTCAAATTTAAAT+GGG + chr3_1:44944623-44944642 Msa0358890:intron 25.0%
! AGATTCAAATTTAAATGGGT+TGG + chr3_1:44944627-44944646 Msa0358890:intron 25.0%
!!! AGTCACAAGTTTTTTGATAT+GGG + chr3_1:44945150-44945169 Msa0358890:intron 25.0%
!!! TCCATAATTTTTGTTTCCAT+TGG + chr3_1:44945238-44945257 Msa0358890:intron 25.0%
! TCCAATGGAAACAAAAATTA+TGG - chr3_1:44945242-44945261 None:intergenic 25.0%
!! TGCGATTTTTATATGAAACT+TGG - chr3_1:44945283-44945302 None:intergenic 25.0%
! AATTCTATATTTGCATGGAA+CGG - chr3_1:44945325-44945344 None:intergenic 25.0%
! TTAACTTATCTCTCATTTAG+TGG - chr3_1:44945444-44945463 None:intergenic 25.0%
!!! AAAGAAAGTAGTTTTAGAAG+AGG - chr3_1:44946343-44946362 None:intergenic 25.0%
! TAGTAGAAAATCACTGTAAT+TGG - chr3_1:44946601-44946620 None:intergenic 25.0%
!!! TTCATTTTTCTGTATACTCT+TGG + chr3_1:44946726-44946745 Msa0358890:intron 25.0%
! GATAAGTAAAAATACTGTCT+TGG + chr3_1:44946837-44946856 Msa0358890:intron 25.0%
!!! TCATTTTAATTTCAAACAGG+TGG + chr3_1:44947535-44947554 Msa0358890:intron 25.0%
!!! CATTTTAATTTCAAACAGGT+GGG + chr3_1:44947536-44947555 Msa0358890:intron 25.0%
! GATATTTGTGTTTCTCTATT+TGG - chr3_1:44947594-44947613 None:intergenic 25.0%
! AGAAATCCATGAAAGATATT+TGG - chr3_1:44947646-44947665 None:intergenic 25.0%
! TATTATTAAAAGAGGTTAGC+TGG + chr3_1:44947717-44947736 Msa0358890:three_prime_UTR 25.0%
! TCAAATAAACTAATCCAAAG+AGG - chr3_1:44947845-44947864 None:intergenic 25.0%
! TATATGTGAGACTATTTGAA+AGG + chr3_1:44947882-44947901 Msa0358890:three_prime_UTR 25.0%
! ATATGTGAGACTATTTGAAA+GGG + chr3_1:44947883-44947902 Msa0358890:three_prime_UTR 25.0%
TCTTCATTTACCATATTGTG+TGG + chr3_1:44939733-44939752 Msa0358890:intron 30.0%
! TGTAGCAGTTTTACATCAAA+TGG + chr3_1:44939958-44939977 Msa0358890:intron 30.0%
TGAATTTCTTAGTGCATGTT+TGG + chr3_1:44940128-44940147 Msa0358890:intron 30.0%
!! GATTTTAAGAAGCTGAGAAT+TGG + chr3_1:44940208-44940227 Msa0358890:intron 30.0%
AATATTAGTGTCTGTTTGGA+GGG - chr3_1:44940294-44940313 None:intergenic 30.0%
! TTGATTTTGTAGGATGTTCT+TGG + chr3_1:44940358-44940377 Msa0358890:intron 30.0%
TCAAAGTAATTACCCTTACA+TGG - chr3_1:44940396-44940415 None:intergenic 30.0%
TTAAGACACACTAATCACTT+AGG - chr3_1:44940505-44940524 None:intergenic 30.0%
ATATCTGCTAGCAGAATATT+TGG + chr3_1:44940583-44940602 Msa0358890:CDS 30.0%
!!! AATTGTTATTTTTAGGGAGC+TGG + chr3_1:44940763-44940782 Msa0358890:intron 30.0%
GTAAAGCAATCATTCTCTAT+AGG + chr3_1:44940842-44940861 Msa0358890:intron 30.0%
TTATTGATCAATGCATGTGT+TGG + chr3_1:44941050-44941069 Msa0358890:intron 30.0%
! CTTTAGATTAAAAGTGTGTC+CGG - chr3_1:44941113-44941132 None:intergenic 30.0%
TCTTATAGGTACTAATGTGA+TGG - chr3_1:44941462-44941481 None:intergenic 30.0%
TAGTACCTATAAGAAAACTC+AGG + chr3_1:44941468-44941487 Msa0358890:CDS 30.0%
TTCTAAATGTTCAATGACAG+TGG - chr3_1:44941519-44941538 None:intergenic 30.0%
! AGTCTCATGTTTTCTAAATG+GGG + chr3_1:44941569-44941588 Msa0358890:intron 30.0%
GTTACAAGTGAGAATTTCAA+TGG - chr3_1:44941665-44941684 None:intergenic 30.0%
!!! CTAAAACCTTTTTGGTTTAG+TGG + chr3_1:44941728-44941747 Msa0358890:intron 30.0%
AATACACCACTAAACCAAAA+AGG - chr3_1:44941737-44941756 None:intergenic 30.0%
! TTTGGATTTCATACTGATTG+TGG + chr3_1:44941833-44941852 Msa0358890:CDS 30.0%
AGAAATTCTTTGTGAGATTG+TGG - chr3_1:44941901-44941920 None:intergenic 30.0%
! CGATATATCTTTGAGGAATT+CGG + chr3_1:44942511-44942530 Msa0358890:intron 30.0%
CGTATAGTTTAAACACAGTT+AGG - chr3_1:44942589-44942608 None:intergenic 30.0%
GAAGAAAAAACCAACAAACA+AGG + chr3_1:44942830-44942849 Msa0358890:intron 30.0%
! TCAGTTTAGAGAGAAGTATA+AGG - chr3_1:44942996-44943015 None:intergenic 30.0%
!!! TTTTTTAGGATTTTGCTTCG+AGG - chr3_1:44943063-44943082 None:intergenic 30.0%
CAAAATCCTAAAAAACACAG+TGG + chr3_1:44943068-44943087 Msa0358890:intron 30.0%
! TCGGTGCACATTTTAAATTA+TGG + chr3_1:44943102-44943121 Msa0358890:intron 30.0%
! CGGTGCACATTTTAAATTAT+GGG + chr3_1:44943103-44943122 Msa0358890:intron 30.0%
TATATTGGAGTATACACTTG+GGG - chr3_1:44943312-44943331 None:intergenic 30.0%
GATATATTGGAGTATACACT+TGG - chr3_1:44943314-44943333 None:intergenic 30.0%
TCAAAGGATATTATGAAGCA+TGG + chr3_1:44943584-44943603 Msa0358890:intron 30.0%
TAGGAAACTAGAATTCTTAC+CGG + chr3_1:44943753-44943772 Msa0358890:intron 30.0%
TTAAAAACCTCCAAAAGAGA+AGG + chr3_1:44943951-44943970 Msa0358890:intron 30.0%
!!! TCGAGTTGAGATTTTATCAA+AGG - chr3_1:44943985-44944004 None:intergenic 30.0%
!!! TTTTAAGATTGGGTGTAATG+AGG - chr3_1:44944088-44944107 None:intergenic 30.0%
TATTCTAACCTCTTATGAGT+TGG - chr3_1:44944217-44944236 None:intergenic 30.0%
AAGACTCTATTATCATCACA+TGG - chr3_1:44944328-44944347 None:intergenic 30.0%
!!! TAAGGATCATCTTTTTTTGG+TGG + chr3_1:44944368-44944387 Msa0358890:intron 30.0%
!!! AAGGATCATCTTTTTTTGGT+GGG + chr3_1:44944369-44944388 Msa0358890:intron 30.0%
!! GTTTGTTGTCTGACATTATA+TGG + chr3_1:44944537-44944556 Msa0358890:intron 30.0%
GAGGGAGATTCAAATTTAAA+TGG + chr3_1:44944622-44944641 Msa0358890:intron 30.0%
!! TTCAAATTTAAATGGGTTGG+CGG + chr3_1:44944630-44944649 Msa0358890:intron 30.0%
AATATTACTGCCGAGAAATA+CGG + chr3_1:44944656-44944675 Msa0358890:intron 30.0%
!!! GAGTCACAAGTTTTTTGATA+TGG + chr3_1:44945149-44945168 Msa0358890:intron 30.0%
TGATATGGGATCACTATAAT+TGG + chr3_1:44945164-44945183 Msa0358890:intron 30.0%
!! GTTTAAGAGCATCTAAACAA+GGG + chr3_1:44945192-44945211 Msa0358890:intron 30.0%
TCATATAAAAATCGCAGAGT+AGG + chr3_1:44945287-44945306 Msa0358890:intron 30.0%
!! TCAATCGCATAAAAGTATTG+TGG + chr3_1:44945393-44945412 Msa0358890:intron 30.0%
!! CAATCGCATAAAAGTATTGT+GGG + chr3_1:44945394-44945413 Msa0358890:intron 30.0%
GTTAATTAGAATATGGCCAT+TGG + chr3_1:44945473-44945492 Msa0358890:intron 30.0%
AATTGATGAGTGTTTCTCAA+AGG + chr3_1:44945923-44945942 Msa0358890:CDS 30.0%
TTGCAAAGTTGTGTTCTTTA+TGG + chr3_1:44946015-44946034 Msa0358890:intron 30.0%
TGCAAAGTTGTGTTCTTTAT+GGG + chr3_1:44946016-44946035 Msa0358890:intron 30.0%
!!! AATGCTATTTTCAATGCAGT+AGG - chr3_1:44946145-44946164 None:intergenic 30.0%
AAATAGCATTAAGATCGGTA+AGG + chr3_1:44946155-44946174 Msa0358890:intron 30.0%
AATGAACTCAATACAGTTCT+AGG - chr3_1:44946207-44946226 None:intergenic 30.0%
TGAGTTCATTAAATCATGCT+TGG + chr3_1:44946217-44946236 Msa0358890:intron 30.0%
GGATTATCATTTCAAACTTC+AGG - chr3_1:44946322-44946341 None:intergenic 30.0%
! TTAAGTAGCATTGAACTTGT+GGG + chr3_1:44946409-44946428 Msa0358890:intron 30.0%
!! AAATCACTGTAATTGGTCTT+TGG - chr3_1:44946594-44946613 None:intergenic 30.0%
ATCAGGACAAAGAACATAAA+TGG + chr3_1:44946645-44946664 Msa0358890:intron 30.0%
!! CAGTATTTTTACTTATCGGT+AGG - chr3_1:44946834-44946853 None:intergenic 30.0%
ACTATCTGAATGTCTAAAGA+AGG + chr3_1:44946893-44946912 Msa0358890:intron 30.0%
TATCTTCAGATATCGTAGTT+CGG - chr3_1:44946944-44946963 None:intergenic 30.0%
!! GTTTGCTTCAGATTTTAGTA+GGG - chr3_1:44947054-44947073 None:intergenic 30.0%
!! AGTTTGCTTCAGATTTTAGT+AGG - chr3_1:44947055-44947074 None:intergenic 30.0%
ATTCGTGTAACCAAAAAAAG+AGG - chr3_1:44947173-44947192 None:intergenic 30.0%
TGTGTTAGGCAAAAATTGTT+AGG + chr3_1:44947235-44947254 Msa0358890:intron 30.0%
! AGCTCTAATTCTTTGTCAAA+AGG - chr3_1:44947414-44947433 None:intergenic 30.0%
ATTCCTCCAAATATCTTTCA+TGG + chr3_1:44947637-44947656 Msa0358890:intron 30.0%
AATCCATGAAAGATATTTGG+AGG - chr3_1:44947643-44947662 None:intergenic 30.0%
TCAGTGTCCATTTATATATG+AGG + chr3_1:44947673-44947692 Msa0358890:three_prime_UTR 30.0%
TCAGGAACCTCATATATAAA+TGG - chr3_1:44947683-44947702 None:intergenic 30.0%
TCTTCATTTACCATATTGTG+TGG + chr3_1:44939733-44939752 Msa0358890:intron 30.0%
! TGTAGCAGTTTTACATCAAA+TGG + chr3_1:44939958-44939977 Msa0358890:intron 30.0%
TGAATTTCTTAGTGCATGTT+TGG + chr3_1:44940128-44940147 Msa0358890:intron 30.0%
!! GATTTTAAGAAGCTGAGAAT+TGG + chr3_1:44940208-44940227 Msa0358890:intron 30.0%
AATATTAGTGTCTGTTTGGA+GGG - chr3_1:44940294-44940313 None:intergenic 30.0%
! TTGATTTTGTAGGATGTTCT+TGG + chr3_1:44940358-44940377 Msa0358890:intron 30.0%
TCAAAGTAATTACCCTTACA+TGG - chr3_1:44940396-44940415 None:intergenic 30.0%
TTAAGACACACTAATCACTT+AGG - chr3_1:44940505-44940524 None:intergenic 30.0%
ATATCTGCTAGCAGAATATT+TGG + chr3_1:44940583-44940602 Msa0358890:CDS 30.0%
!!! AATTGTTATTTTTAGGGAGC+TGG + chr3_1:44940763-44940782 Msa0358890:intron 30.0%
GTAAAGCAATCATTCTCTAT+AGG + chr3_1:44940842-44940861 Msa0358890:intron 30.0%
TTATTGATCAATGCATGTGT+TGG + chr3_1:44941050-44941069 Msa0358890:intron 30.0%
! CTTTAGATTAAAAGTGTGTC+CGG - chr3_1:44941113-44941132 None:intergenic 30.0%
TCTTATAGGTACTAATGTGA+TGG - chr3_1:44941462-44941481 None:intergenic 30.0%
TAGTACCTATAAGAAAACTC+AGG + chr3_1:44941468-44941487 Msa0358890:CDS 30.0%
TTCTAAATGTTCAATGACAG+TGG - chr3_1:44941519-44941538 None:intergenic 30.0%
! AGTCTCATGTTTTCTAAATG+GGG + chr3_1:44941569-44941588 Msa0358890:intron 30.0%
GTTACAAGTGAGAATTTCAA+TGG - chr3_1:44941665-44941684 None:intergenic 30.0%
!!! CTAAAACCTTTTTGGTTTAG+TGG + chr3_1:44941728-44941747 Msa0358890:intron 30.0%
AATACACCACTAAACCAAAA+AGG - chr3_1:44941737-44941756 None:intergenic 30.0%
! TTTGGATTTCATACTGATTG+TGG + chr3_1:44941833-44941852 Msa0358890:CDS 30.0%
AGAAATTCTTTGTGAGATTG+TGG - chr3_1:44941901-44941920 None:intergenic 30.0%
! CGATATATCTTTGAGGAATT+CGG + chr3_1:44942511-44942530 Msa0358890:intron 30.0%
CGTATAGTTTAAACACAGTT+AGG - chr3_1:44942589-44942608 None:intergenic 30.0%
GAAGAAAAAACCAACAAACA+AGG + chr3_1:44942830-44942849 Msa0358890:intron 30.0%
! TCAGTTTAGAGAGAAGTATA+AGG - chr3_1:44942996-44943015 None:intergenic 30.0%
!!! TTTTTTAGGATTTTGCTTCG+AGG - chr3_1:44943063-44943082 None:intergenic 30.0%
CAAAATCCTAAAAAACACAG+TGG + chr3_1:44943068-44943087 Msa0358890:intron 30.0%
! TCGGTGCACATTTTAAATTA+TGG + chr3_1:44943102-44943121 Msa0358890:intron 30.0%
! CGGTGCACATTTTAAATTAT+GGG + chr3_1:44943103-44943122 Msa0358890:intron 30.0%
TATATTGGAGTATACACTTG+GGG - chr3_1:44943312-44943331 None:intergenic 30.0%
GATATATTGGAGTATACACT+TGG - chr3_1:44943314-44943333 None:intergenic 30.0%
TCAAAGGATATTATGAAGCA+TGG + chr3_1:44943584-44943603 Msa0358890:intron 30.0%
TAGGAAACTAGAATTCTTAC+CGG + chr3_1:44943753-44943772 Msa0358890:intron 30.0%
TTAAAAACCTCCAAAAGAGA+AGG + chr3_1:44943951-44943970 Msa0358890:intron 30.0%
!!! TCGAGTTGAGATTTTATCAA+AGG - chr3_1:44943985-44944004 None:intergenic 30.0%
!!! TTTTAAGATTGGGTGTAATG+AGG - chr3_1:44944088-44944107 None:intergenic 30.0%
TATTCTAACCTCTTATGAGT+TGG - chr3_1:44944217-44944236 None:intergenic 30.0%
AAGACTCTATTATCATCACA+TGG - chr3_1:44944328-44944347 None:intergenic 30.0%
!!! TAAGGATCATCTTTTTTTGG+TGG + chr3_1:44944368-44944387 Msa0358890:intron 30.0%
!!! AAGGATCATCTTTTTTTGGT+GGG + chr3_1:44944369-44944388 Msa0358890:intron 30.0%
!! GTTTGTTGTCTGACATTATA+TGG + chr3_1:44944537-44944556 Msa0358890:intron 30.0%
GAGGGAGATTCAAATTTAAA+TGG + chr3_1:44944622-44944641 Msa0358890:intron 30.0%
!! TTCAAATTTAAATGGGTTGG+CGG + chr3_1:44944630-44944649 Msa0358890:intron 30.0%
AATATTACTGCCGAGAAATA+CGG + chr3_1:44944656-44944675 Msa0358890:intron 30.0%
!!! GAGTCACAAGTTTTTTGATA+TGG + chr3_1:44945149-44945168 Msa0358890:intron 30.0%
TGATATGGGATCACTATAAT+TGG + chr3_1:44945164-44945183 Msa0358890:intron 30.0%
!! GTTTAAGAGCATCTAAACAA+GGG + chr3_1:44945192-44945211 Msa0358890:intron 30.0%
TCATATAAAAATCGCAGAGT+AGG + chr3_1:44945287-44945306 Msa0358890:intron 30.0%
!! TCAATCGCATAAAAGTATTG+TGG + chr3_1:44945393-44945412 Msa0358890:intron 30.0%
!! CAATCGCATAAAAGTATTGT+GGG + chr3_1:44945394-44945413 Msa0358890:intron 30.0%
GTTAATTAGAATATGGCCAT+TGG + chr3_1:44945473-44945492 Msa0358890:intron 30.0%
AATTGATGAGTGTTTCTCAA+AGG + chr3_1:44945923-44945942 Msa0358890:CDS 30.0%
TTGCAAAGTTGTGTTCTTTA+TGG + chr3_1:44946015-44946034 Msa0358890:intron 30.0%
TGCAAAGTTGTGTTCTTTAT+GGG + chr3_1:44946016-44946035 Msa0358890:intron 30.0%
!!! AATGCTATTTTCAATGCAGT+AGG - chr3_1:44946145-44946164 None:intergenic 30.0%
AAATAGCATTAAGATCGGTA+AGG + chr3_1:44946155-44946174 Msa0358890:intron 30.0%
AATGAACTCAATACAGTTCT+AGG - chr3_1:44946207-44946226 None:intergenic 30.0%
TGAGTTCATTAAATCATGCT+TGG + chr3_1:44946217-44946236 Msa0358890:intron 30.0%
GGATTATCATTTCAAACTTC+AGG - chr3_1:44946322-44946341 None:intergenic 30.0%
! TTAAGTAGCATTGAACTTGT+GGG + chr3_1:44946409-44946428 Msa0358890:intron 30.0%
!! AAATCACTGTAATTGGTCTT+TGG - chr3_1:44946594-44946613 None:intergenic 30.0%
ATCAGGACAAAGAACATAAA+TGG + chr3_1:44946645-44946664 Msa0358890:intron 30.0%
!! CAGTATTTTTACTTATCGGT+AGG - chr3_1:44946834-44946853 None:intergenic 30.0%
ACTATCTGAATGTCTAAAGA+AGG + chr3_1:44946893-44946912 Msa0358890:intron 30.0%
TATCTTCAGATATCGTAGTT+CGG - chr3_1:44946944-44946963 None:intergenic 30.0%
!! GTTTGCTTCAGATTTTAGTA+GGG - chr3_1:44947054-44947073 None:intergenic 30.0%
!! AGTTTGCTTCAGATTTTAGT+AGG - chr3_1:44947055-44947074 None:intergenic 30.0%
ATTCGTGTAACCAAAAAAAG+AGG - chr3_1:44947173-44947192 None:intergenic 30.0%
TGTGTTAGGCAAAAATTGTT+AGG + chr3_1:44947235-44947254 Msa0358890:intron 30.0%
! AGCTCTAATTCTTTGTCAAA+AGG - chr3_1:44947414-44947433 None:intergenic 30.0%
ATTCCTCCAAATATCTTTCA+TGG + chr3_1:44947637-44947656 Msa0358890:intron 30.0%
AATCCATGAAAGATATTTGG+AGG - chr3_1:44947643-44947662 None:intergenic 30.0%
TCAGTGTCCATTTATATATG+AGG + chr3_1:44947673-44947692 Msa0358890:three_prime_UTR 30.0%
TCAGGAACCTCATATATAAA+TGG - chr3_1:44947683-44947702 None:intergenic 30.0%
CATATTGTGTGGACTTTCAA+GGG + chr3_1:44939744-44939763 Msa0358890:intron 35.0%
TTAAGTCACCAGAAAATGGT+AGG - chr3_1:44939774-44939793 None:intergenic 35.0%
GGAAATAGGATGAAAGTAAG+TGG - chr3_1:44939801-44939820 None:intergenic 35.0%
! CTTAAAGAGTGTGAAGAGAA+TGG - chr3_1:44939838-44939857 None:intergenic 35.0%
CATTCTCTTCACACTCTTTA+AGG + chr3_1:44939836-44939855 Msa0358890:intron 35.0%
GAATATTAGTGTCTGTTTGG+AGG - chr3_1:44940295-44940314 None:intergenic 35.0%
AGAAGAGATAGACCATGTAA+GGG + chr3_1:44940381-44940400 Msa0358890:CDS 35.0%
!!! TTATTTTTAGGGAGCTGGTA+GGG + chr3_1:44940768-44940787 Msa0358890:intron 35.0%
!! GATTTGAGAGTATTCTATGG+TGG + chr3_1:44940808-44940827 Msa0358890:CDS 35.0%
TAATGTTGGAAATAGACTCC+CGG + chr3_1:44940931-44940950 Msa0358890:intron 35.0%
TGTTAGACACTAATACGTGT+AGG + chr3_1:44941084-44941103 Msa0358890:intron 35.0%
AAGTCATCTATCTTCATCCT+CGG - chr3_1:44941183-44941202 None:intergenic 35.0%
AAACAGTATTGTCACTGTAG+TGG - chr3_1:44941287-44941306 None:intergenic 35.0%
CTCATTAGGTTTATTGGAAC+TGG - chr3_1:44941325-44941344 None:intergenic 35.0%
AAAATCTGTACACCACTTCA+AGG - chr3_1:44941429-44941448 None:intergenic 35.0%
! AAGTGGTGTACAGATTTTAC+TGG + chr3_1:44941431-44941450 Msa0358890:CDS 35.0%
! CAGAACCTGAGTTTTCTTAT+AGG - chr3_1:44941476-44941495 None:intergenic 35.0%
TCTTGTCCATGGAATTTCAA+TGG + chr3_1:44941616-44941635 Msa0358890:CDS 35.0%
CTTGTCCATGGAATTTCAAT+GGG + chr3_1:44941617-44941636 Msa0358890:CDS 35.0%
! TGAAATCCAAAACTTGCTTC+AGG - chr3_1:44941824-44941843 None:intergenic 35.0%
! TCATTTACACTTTGCTGTCA+TGG - chr3_1:44941933-44941952 None:intergenic 35.0%
CGTTTGTATCCTGGAAATAA+AGG + chr3_1:44942061-44942080 Msa0358890:intron 35.0%
! ACTAAAGCACCTTTATTTCC+AGG - chr3_1:44942073-44942092 None:intergenic 35.0%
AGAGATCATGTCATTCATGT+AGG + chr3_1:44942192-44942211 Msa0358890:intron 35.0%
CATTCATGTAGGTGAATACT+TGG + chr3_1:44942203-44942222 Msa0358890:intron 35.0%
GAATGGAAAGGAATTAGTTG+CGG + chr3_1:44942245-44942264 Msa0358890:CDS 35.0%
!! AACTCATTTTGTCACTTCTG+AGG + chr3_1:44942278-44942297 Msa0358890:CDS 35.0%
!!! ATTTTGTCACTTCTGAGGTT+TGG + chr3_1:44942283-44942302 Msa0358890:intron 35.0%
TGGTTATGTTCTACTCTATC+TGG + chr3_1:44942303-44942322 Msa0358890:intron 35.0%
ATATGTGAGCAGTGAACATT+GGG - chr3_1:44942346-44942365 None:intergenic 35.0%
GCTTTACTCTTTGTAGTGTT+CGG - chr3_1:44942400-44942419 None:intergenic 35.0%
AACGAAGTGGAGTTTCATAA+AGG - chr3_1:44942456-44942475 None:intergenic 35.0%
CCAGTTACAAGATCAAGTTT+GGG - chr3_1:44942562-44942581 None:intergenic 35.0%
CCAAACTTGATCTTGTAACT+GGG + chr3_1:44942560-44942579 Msa0358890:intron 35.0%
CTTGTTCATTCAGATGTATG+AGG - chr3_1:44942734-44942753 None:intergenic 35.0%
TCTGAATGAACAAGACGAAA+AGG + chr3_1:44942740-44942759 Msa0358890:intron 35.0%
TAGGGCAAATATCAGACATA+AGG - chr3_1:44942864-44942883 None:intergenic 35.0%
! ACTACTATATTCTAAGGAGC+AGG - chr3_1:44942919-44942938 None:intergenic 35.0%
TCTTATATCTGATACTACCC+TGG + chr3_1:44942944-44942963 Msa0358890:intron 35.0%
!!! TTACTCCCACTGTGTTTTTT+AGG - chr3_1:44943077-44943096 None:intergenic 35.0%
ACGAGATTAGTGGAAAACAT+GGG + chr3_1:44943143-44943162 Msa0358890:intron 35.0%
GTATCTGATACCCTTCTTAT+CGG - chr3_1:44943224-44943243 None:intergenic 35.0%
ATATTGGAGTATACACTTGG+GGG - chr3_1:44943311-44943330 None:intergenic 35.0%
AACAGGCCCTTAAGATATAT+TGG - chr3_1:44943327-44943346 None:intergenic 35.0%
ATTTGAGCTTCTCAACTGTT+TGG + chr3_1:44943358-44943377 Msa0358890:intron 35.0%
TTTGAGCTTCTCAACTGTTT+GGG + chr3_1:44943359-44943378 Msa0358890:intron 35.0%
ATGCATTCCAAGATTGCTTA+CGG + chr3_1:44943439-44943458 Msa0358890:intron 35.0%
TTTGAATGCTTCTAGTGCTT+AGG - chr3_1:44943569-44943588 None:intergenic 35.0%
!! TAAGCACTAGAAGCATTCAA+AGG + chr3_1:44943568-44943587 Msa0358890:intron 35.0%
!! GTAATTACATGTGTCGGTTT+CGG - chr3_1:44943657-44943676 None:intergenic 35.0%
CTAGTTTCCTATATGAAGCA+CGG - chr3_1:44943744-44943763 None:intergenic 35.0%
TCCAACTCTTCTTTACTAAG+TGG + chr3_1:44943826-44943845 Msa0358890:intron 35.0%
ACCACTTAGTAAAGAAGAGT+TGG - chr3_1:44943830-44943849 None:intergenic 35.0%
CGTAACTGATCGAATAGTAA+AGG - chr3_1:44943911-44943930 None:intergenic 35.0%
!!! GAGGTTTTTAAGATTGTTCG+CGG - chr3_1:44943942-44943961 None:intergenic 35.0%
! TAAACTACCTTCTCTTTTGG+AGG - chr3_1:44943961-44943980 None:intergenic 35.0%
! GGATAAACTACCTTCTCTTT+TGG - chr3_1:44943964-44943983 None:intergenic 35.0%
TCTATTCTCCAACTCATAAG+AGG + chr3_1:44944206-44944225 Msa0358890:intron 35.0%
TTCCACTGCTAAAGAGATTT+GGG - chr3_1:44944258-44944277 None:intergenic 35.0%
TTTCCACTGCTAAAGAGATT+TGG - chr3_1:44944259-44944278 None:intergenic 35.0%
!! GTTCCATTGAAGTGTTTTGA+AGG + chr3_1:44944467-44944486 Msa0358890:intron 35.0%
GATCCTTCAAAACACTTCAA+TGG - chr3_1:44944473-44944492 None:intergenic 35.0%
TTCAGTGTTTGAACAAAGAC+TGG + chr3_1:44944515-44944534 Msa0358890:intron 35.0%
TGTTGTCTGACATTATATGG+AGG + chr3_1:44944540-44944559 Msa0358890:intron 35.0%
!! TCAAATTTAAATGGGTTGGC+GGG + chr3_1:44944631-44944650 Msa0358890:intron 35.0%
!!! ATCTTTTAGTTCCTGTTTGC+AGG - chr3_1:44944690-44944709 None:intergenic 35.0%
TGCAAACAGGAACTAAAAGA+TGG + chr3_1:44944689-44944708 Msa0358890:intron 35.0%
AGGAACTAAAAGATGGTGAT+GGG + chr3_1:44944696-44944715 Msa0358890:intron 35.0%
!! GGTTTAAGAGCATCTAAACA+AGG + chr3_1:44945191-44945210 Msa0358890:intron 35.0%
!! TCTTTTGCTGATTGATTGCA+AGG - chr3_1:44945354-44945373 None:intergenic 35.0%
! TGTATGATTTTGCGAAACGA+AGG + chr3_1:44945418-44945437 Msa0358890:intron 35.0%
!! TCTCTAGCTCAACAATTTTC+TGG - chr3_1:44945695-44945714 None:intergenic 35.0%
CTGAAAATCTCCAAAGGTTA+CGG - chr3_1:44945894-44945913 None:intergenic 35.0%
GAATCAAGCAAAGAAGGAAA+TGG + chr3_1:44946079-44946098 Msa0358890:CDS 35.0%
AAAGAAGGAAATGGATGGTT+AGG + chr3_1:44946088-44946107 Msa0358890:CDS 35.0%
! GTTAAGTAGCATTGAACTTG+TGG + chr3_1:44946408-44946427 Msa0358890:intron 35.0%
! TAAGTAGCATTGAACTTGTG+GGG + chr3_1:44946410-44946429 Msa0358890:intron 35.0%
CATGTTTCGGTTCTTTAGAT+CGG - chr3_1:44946534-44946553 None:intergenic 35.0%
ATCTAAAGAACCGAAACATG+TGG + chr3_1:44946534-44946553 Msa0358890:intron 35.0%
! TTGTGTACTTTTGATCTGTC+TGG + chr3_1:44946679-44946698 Msa0358890:intron 35.0%
! TGTGTACTTTTGATCTGTCT+GGG + chr3_1:44946680-44946699 Msa0358890:intron 35.0%
! TTTTGATCTGTCTGGGTAAA+TGG + chr3_1:44946687-44946706 Msa0358890:intron 35.0%
! AAATCCGATAGTACCGAATT+CGG + chr3_1:44946806-44946825 Msa0358890:intron 35.0%
GATATCTGAAGATATGTACG+AGG + chr3_1:44946950-44946969 Msa0358890:intron 35.0%
ATATGTACGAGGTAAATGTC+AGG + chr3_1:44946961-44946980 Msa0358890:intron 35.0%
!!! GTGAATCTCTCCTCTTTTTT+TGG + chr3_1:44947160-44947179 Msa0358890:intron 35.0%
TAGGCATGCATATTCAAAAG+AGG - chr3_1:44947200-44947219 None:intergenic 35.0%
TCATCTACTTTGTCAAGTGA+TGG - chr3_1:44947366-44947385 None:intergenic 35.0%
CAAAGTAGATGATGAGAAGT+TGG + chr3_1:44947374-44947393 Msa0358890:CDS 35.0%
TTAATTTCAAACAGGTGGGA+TGG + chr3_1:44947540-44947559 Msa0358890:intron 35.0%
! ATGTTTCCTCTAGTTTCCAA+AGG + chr3_1:44947789-44947808 Msa0358890:intron 35.0%
! TGTTTCCTCTAGTTTCCAAA+GGG + chr3_1:44947790-44947809 Msa0358890:intron 35.0%
TAAGCTCAAAACACAAGGTA+TGG - chr3_1:44947989-44948008 None:intergenic 35.0%
!! ATACCTTGTGTTTTGAGCTT+AGG + chr3_1:44947988-44948007 Msa0358890:three_prime_UTR 35.0%
!! TACCTTGTGTTTTGAGCTTA+GGG + chr3_1:44947989-44948008 Msa0358890:three_prime_UTR 35.0%
CATATTGTGTGGACTTTCAA+GGG + chr3_1:44939744-44939763 Msa0358890:intron 35.0%
TTAAGTCACCAGAAAATGGT+AGG - chr3_1:44939774-44939793 None:intergenic 35.0%
GGAAATAGGATGAAAGTAAG+TGG - chr3_1:44939801-44939820 None:intergenic 35.0%
! CTTAAAGAGTGTGAAGAGAA+TGG - chr3_1:44939838-44939857 None:intergenic 35.0%
CATTCTCTTCACACTCTTTA+AGG + chr3_1:44939836-44939855 Msa0358890:intron 35.0%
GAATATTAGTGTCTGTTTGG+AGG - chr3_1:44940295-44940314 None:intergenic 35.0%
AGAAGAGATAGACCATGTAA+GGG + chr3_1:44940381-44940400 Msa0358890:CDS 35.0%
!!! TTATTTTTAGGGAGCTGGTA+GGG + chr3_1:44940768-44940787 Msa0358890:intron 35.0%
!! GATTTGAGAGTATTCTATGG+TGG + chr3_1:44940808-44940827 Msa0358890:CDS 35.0%
TAATGTTGGAAATAGACTCC+CGG + chr3_1:44940931-44940950 Msa0358890:intron 35.0%
TGTTAGACACTAATACGTGT+AGG + chr3_1:44941084-44941103 Msa0358890:intron 35.0%
AAGTCATCTATCTTCATCCT+CGG - chr3_1:44941183-44941202 None:intergenic 35.0%
AAACAGTATTGTCACTGTAG+TGG - chr3_1:44941287-44941306 None:intergenic 35.0%
CTCATTAGGTTTATTGGAAC+TGG - chr3_1:44941325-44941344 None:intergenic 35.0%
AAAATCTGTACACCACTTCA+AGG - chr3_1:44941429-44941448 None:intergenic 35.0%
! AAGTGGTGTACAGATTTTAC+TGG + chr3_1:44941431-44941450 Msa0358890:CDS 35.0%
! CAGAACCTGAGTTTTCTTAT+AGG - chr3_1:44941476-44941495 None:intergenic 35.0%
TCTTGTCCATGGAATTTCAA+TGG + chr3_1:44941616-44941635 Msa0358890:CDS 35.0%
CTTGTCCATGGAATTTCAAT+GGG + chr3_1:44941617-44941636 Msa0358890:CDS 35.0%
! TGAAATCCAAAACTTGCTTC+AGG - chr3_1:44941824-44941843 None:intergenic 35.0%
! TCATTTACACTTTGCTGTCA+TGG - chr3_1:44941933-44941952 None:intergenic 35.0%
CGTTTGTATCCTGGAAATAA+AGG + chr3_1:44942061-44942080 Msa0358890:intron 35.0%
! ACTAAAGCACCTTTATTTCC+AGG - chr3_1:44942073-44942092 None:intergenic 35.0%
AGAGATCATGTCATTCATGT+AGG + chr3_1:44942192-44942211 Msa0358890:intron 35.0%
CATTCATGTAGGTGAATACT+TGG + chr3_1:44942203-44942222 Msa0358890:intron 35.0%
GAATGGAAAGGAATTAGTTG+CGG + chr3_1:44942245-44942264 Msa0358890:CDS 35.0%
!! AACTCATTTTGTCACTTCTG+AGG + chr3_1:44942278-44942297 Msa0358890:CDS 35.0%
!!! ATTTTGTCACTTCTGAGGTT+TGG + chr3_1:44942283-44942302 Msa0358890:intron 35.0%
TGGTTATGTTCTACTCTATC+TGG + chr3_1:44942303-44942322 Msa0358890:intron 35.0%
ATATGTGAGCAGTGAACATT+GGG - chr3_1:44942346-44942365 None:intergenic 35.0%
GCTTTACTCTTTGTAGTGTT+CGG - chr3_1:44942400-44942419 None:intergenic 35.0%
AACGAAGTGGAGTTTCATAA+AGG - chr3_1:44942456-44942475 None:intergenic 35.0%
CCAGTTACAAGATCAAGTTT+GGG - chr3_1:44942562-44942581 None:intergenic 35.0%
CCAAACTTGATCTTGTAACT+GGG + chr3_1:44942560-44942579 Msa0358890:intron 35.0%
CTTGTTCATTCAGATGTATG+AGG - chr3_1:44942734-44942753 None:intergenic 35.0%
TCTGAATGAACAAGACGAAA+AGG + chr3_1:44942740-44942759 Msa0358890:intron 35.0%
TAGGGCAAATATCAGACATA+AGG - chr3_1:44942864-44942883 None:intergenic 35.0%
! ACTACTATATTCTAAGGAGC+AGG - chr3_1:44942919-44942938 None:intergenic 35.0%
TCTTATATCTGATACTACCC+TGG + chr3_1:44942944-44942963 Msa0358890:intron 35.0%
!!! TTACTCCCACTGTGTTTTTT+AGG - chr3_1:44943077-44943096 None:intergenic 35.0%
ACGAGATTAGTGGAAAACAT+GGG + chr3_1:44943143-44943162 Msa0358890:intron 35.0%
GTATCTGATACCCTTCTTAT+CGG - chr3_1:44943224-44943243 None:intergenic 35.0%
ATATTGGAGTATACACTTGG+GGG - chr3_1:44943311-44943330 None:intergenic 35.0%
AACAGGCCCTTAAGATATAT+TGG - chr3_1:44943327-44943346 None:intergenic 35.0%
ATTTGAGCTTCTCAACTGTT+TGG + chr3_1:44943358-44943377 Msa0358890:intron 35.0%
TTTGAGCTTCTCAACTGTTT+GGG + chr3_1:44943359-44943378 Msa0358890:intron 35.0%
ATGCATTCCAAGATTGCTTA+CGG + chr3_1:44943439-44943458 Msa0358890:intron 35.0%
TTTGAATGCTTCTAGTGCTT+AGG - chr3_1:44943569-44943588 None:intergenic 35.0%
!! TAAGCACTAGAAGCATTCAA+AGG + chr3_1:44943568-44943587 Msa0358890:intron 35.0%
!! GTAATTACATGTGTCGGTTT+CGG - chr3_1:44943657-44943676 None:intergenic 35.0%
CTAGTTTCCTATATGAAGCA+CGG - chr3_1:44943744-44943763 None:intergenic 35.0%
TCCAACTCTTCTTTACTAAG+TGG + chr3_1:44943826-44943845 Msa0358890:intron 35.0%
ACCACTTAGTAAAGAAGAGT+TGG - chr3_1:44943830-44943849 None:intergenic 35.0%
CGTAACTGATCGAATAGTAA+AGG - chr3_1:44943911-44943930 None:intergenic 35.0%
!!! GAGGTTTTTAAGATTGTTCG+CGG - chr3_1:44943942-44943961 None:intergenic 35.0%
! TAAACTACCTTCTCTTTTGG+AGG - chr3_1:44943961-44943980 None:intergenic 35.0%
! GGATAAACTACCTTCTCTTT+TGG - chr3_1:44943964-44943983 None:intergenic 35.0%
TCTATTCTCCAACTCATAAG+AGG + chr3_1:44944206-44944225 Msa0358890:intron 35.0%
TTCCACTGCTAAAGAGATTT+GGG - chr3_1:44944258-44944277 None:intergenic 35.0%
TTTCCACTGCTAAAGAGATT+TGG - chr3_1:44944259-44944278 None:intergenic 35.0%
!! GTTCCATTGAAGTGTTTTGA+AGG + chr3_1:44944467-44944486 Msa0358890:intron 35.0%
GATCCTTCAAAACACTTCAA+TGG - chr3_1:44944473-44944492 None:intergenic 35.0%
TTCAGTGTTTGAACAAAGAC+TGG + chr3_1:44944515-44944534 Msa0358890:intron 35.0%
TGTTGTCTGACATTATATGG+AGG + chr3_1:44944540-44944559 Msa0358890:intron 35.0%
!! TCAAATTTAAATGGGTTGGC+GGG + chr3_1:44944631-44944650 Msa0358890:intron 35.0%
!!! ATCTTTTAGTTCCTGTTTGC+AGG - chr3_1:44944690-44944709 None:intergenic 35.0%
TGCAAACAGGAACTAAAAGA+TGG + chr3_1:44944689-44944708 Msa0358890:intron 35.0%
AGGAACTAAAAGATGGTGAT+GGG + chr3_1:44944696-44944715 Msa0358890:intron 35.0%
!! GGTTTAAGAGCATCTAAACA+AGG + chr3_1:44945191-44945210 Msa0358890:intron 35.0%
!! TCTTTTGCTGATTGATTGCA+AGG - chr3_1:44945354-44945373 None:intergenic 35.0%
! TGTATGATTTTGCGAAACGA+AGG + chr3_1:44945418-44945437 Msa0358890:intron 35.0%
!! TCTCTAGCTCAACAATTTTC+TGG - chr3_1:44945695-44945714 None:intergenic 35.0%
CTGAAAATCTCCAAAGGTTA+CGG - chr3_1:44945894-44945913 None:intergenic 35.0%
GAATCAAGCAAAGAAGGAAA+TGG + chr3_1:44946079-44946098 Msa0358890:CDS 35.0%
AAAGAAGGAAATGGATGGTT+AGG + chr3_1:44946088-44946107 Msa0358890:CDS 35.0%
! GTTAAGTAGCATTGAACTTG+TGG + chr3_1:44946408-44946427 Msa0358890:intron 35.0%
! TAAGTAGCATTGAACTTGTG+GGG + chr3_1:44946410-44946429 Msa0358890:intron 35.0%
CATGTTTCGGTTCTTTAGAT+CGG - chr3_1:44946534-44946553 None:intergenic 35.0%
ATCTAAAGAACCGAAACATG+TGG + chr3_1:44946534-44946553 Msa0358890:intron 35.0%
! TTGTGTACTTTTGATCTGTC+TGG + chr3_1:44946679-44946698 Msa0358890:intron 35.0%
! TGTGTACTTTTGATCTGTCT+GGG + chr3_1:44946680-44946699 Msa0358890:intron 35.0%
! TTTTGATCTGTCTGGGTAAA+TGG + chr3_1:44946687-44946706 Msa0358890:intron 35.0%
! AAATCCGATAGTACCGAATT+CGG + chr3_1:44946806-44946825 Msa0358890:intron 35.0%
GATATCTGAAGATATGTACG+AGG + chr3_1:44946950-44946969 Msa0358890:intron 35.0%
ATATGTACGAGGTAAATGTC+AGG + chr3_1:44946961-44946980 Msa0358890:intron 35.0%
!!! GTGAATCTCTCCTCTTTTTT+TGG + chr3_1:44947160-44947179 Msa0358890:intron 35.0%
TAGGCATGCATATTCAAAAG+AGG - chr3_1:44947200-44947219 None:intergenic 35.0%
TCATCTACTTTGTCAAGTGA+TGG - chr3_1:44947366-44947385 None:intergenic 35.0%
CAAAGTAGATGATGAGAAGT+TGG + chr3_1:44947374-44947393 Msa0358890:CDS 35.0%
TTAATTTCAAACAGGTGGGA+TGG + chr3_1:44947540-44947559 Msa0358890:intron 35.0%
! ATGTTTCCTCTAGTTTCCAA+AGG + chr3_1:44947789-44947808 Msa0358890:intron 35.0%
! TGTTTCCTCTAGTTTCCAAA+GGG + chr3_1:44947790-44947809 Msa0358890:intron 35.0%
TAAGCTCAAAACACAAGGTA+TGG - chr3_1:44947989-44948008 None:intergenic 35.0%
!! ATACCTTGTGTTTTGAGCTT+AGG + chr3_1:44947988-44948007 Msa0358890:three_prime_UTR 35.0%
!! TACCTTGTGTTTTGAGCTTA+GGG + chr3_1:44947989-44948008 Msa0358890:three_prime_UTR 35.0%
CCTTGAAAGTCCACACAATA+TGG - chr3_1:44939746-44939765 None:intergenic 40.0%
CCATATTGTGTGGACTTTCA+AGG + chr3_1:44939743-44939762 Msa0358890:intron 40.0%
TGCTTCCATACCAAATGAAC+AGG + chr3_1:44939988-44940007 Msa0358890:intron 40.0%
ACTTGCCTGTTCATTTGGTA+TGG - chr3_1:44939996-44940015 None:intergenic 40.0%
TGATCACTTGCCTGTTCATT+TGG - chr3_1:44940001-44940020 None:intergenic 40.0%
GAGAAGAGATAGACCATGTA+AGG + chr3_1:44940380-44940399 Msa0358890:CDS 40.0%
GAGATAGCATTCAACTGCTT+TGG - chr3_1:44940424-44940443 None:intergenic 40.0%
AATTTCAAGGTTGAGTAGGG+TGG - chr3_1:44940464-44940483 None:intergenic 40.0%
TGCTAGCAGATATACCTGAT+TGG - chr3_1:44940576-44940595 None:intergenic 40.0%
!!! GTTATTTTTAGGGAGCTGGT+AGG + chr3_1:44940767-44940786 Msa0358890:intron 40.0%
!! GGGGATTTGAGAGTATTCTA+TGG + chr3_1:44940805-44940824 Msa0358890:CDS 40.0%
TACTACTGGTGTCTACACAT+CGG - chr3_1:44941013-44941032 None:intergenic 40.0%
GTCATTCGATCTTCATCCAA+TGG + chr3_1:44941251-44941270 Msa0358890:intron 40.0%
ACAATACTGTTTGCGACTGT+AGG + chr3_1:44941295-44941314 Msa0358890:intron 40.0%
CAATACTGTTTGCGACTGTA+GGG + chr3_1:44941296-44941315 Msa0358890:intron 40.0%
TACTATCATTCTCGTTTGCC+AGG + chr3_1:44941863-44941882 Msa0358890:CDS 40.0%
ACTATCATTCTCGTTTGCCA+GGG + chr3_1:44941864-44941883 Msa0358890:CDS 40.0%
TTGTGGTTACCTAAAAACCC+TGG - chr3_1:44941884-44941903 None:intergenic 40.0%
!! CTATCTGGTTTCCCTCATTT+TGG + chr3_1:44942318-44942337 Msa0358890:intron 40.0%
AACATTGGGAGCCAAAATGA+GGG - chr3_1:44942332-44942351 None:intergenic 40.0%
CATATGTGAGCAGTGAACAT+TGG - chr3_1:44942347-44942366 None:intergenic 40.0%
ATGAAACTCCACTTCGTTGA+AGG + chr3_1:44942458-44942477 Msa0358890:intron 40.0%
TGAAACTCCACTTCGTTGAA+GGG + chr3_1:44942459-44942478 Msa0358890:intron 40.0%
CCCAAACTTGATCTTGTAAC+TGG + chr3_1:44942559-44942578 Msa0358890:intron 40.0%
CCCAGTTACAAGATCAAGTT+TGG - chr3_1:44942563-44942582 None:intergenic 40.0%
AAATGTTGATGTGACTCGAG+TGG + chr3_1:44942649-44942668 Msa0358890:intron 40.0%
TTGCAGAATGAGCAAAACCA+GGG - chr3_1:44942964-44942983 None:intergenic 40.0%
TTTGCAGAATGAGCAAAACC+AGG - chr3_1:44942965-44942984 None:intergenic 40.0%
CACAGTGGGAGTAAAATAGT+CGG + chr3_1:44943083-44943102 Msa0358890:intron 40.0%
ACAGATAGACACGAGATTAG+TGG + chr3_1:44943133-44943152 Msa0358890:intron 40.0%
CACGAGATTAGTGGAAAACA+TGG + chr3_1:44943142-44943161 Msa0358890:intron 40.0%
TGCTTCCATATCCGATAAGA+AGG + chr3_1:44943210-44943229 Msa0358890:intron 40.0%
GCTTCCATATCCGATAAGAA+GGG + chr3_1:44943211-44943230 Msa0358890:intron 40.0%
GATACCCTTCTTATCGGATA+TGG - chr3_1:44943218-44943237 None:intergenic 40.0%
TTGAGCTTCTCAACTGTTTG+GGG + chr3_1:44943360-44943379 Msa0358890:intron 40.0%
TCCAAGATTGCTTACGGAAA+CGG + chr3_1:44943445-44943464 Msa0358890:intron 40.0%
TTACCGGAATAACTGCTAGA+TGG + chr3_1:44943769-44943788 Msa0358890:intron 40.0%
AAGCCATCTAGCAGTTATTC+CGG - chr3_1:44943775-44943794 None:intergenic 40.0%
GAAAATTCCCCTTTACCTTG+TGG + chr3_1:44943853-44943872 Msa0358890:intron 40.0%
!! TGGTTTTGCCACAAGGTAAA+GGG - chr3_1:44943864-44943883 None:intergenic 40.0%
!! ATGGTTTTGCCACAAGGTAA+AGG - chr3_1:44943865-44943884 None:intergenic 40.0%
TCGAATAGTAAAGGACTCAG+AGG - chr3_1:44943902-44943921 None:intergenic 40.0%
AAACAATTGTGACCACTCTC+CGG + chr3_1:44944284-44944303 Msa0358890:intron 40.0%
CTATTATCATCACATGGCTG+TGG - chr3_1:44944322-44944341 None:intergenic 40.0%
TTGAAGGATCCAACTCTAGT+AGG + chr3_1:44944483-44944502 Msa0358890:intron 40.0%
TCACAATGACCTACTAGAGT+TGG - chr3_1:44944495-44944514 None:intergenic 40.0%
TGACATTATATGGAGGCAGT+GGG + chr3_1:44944547-44944566 Msa0358890:intron 40.0%
CAGGAACTAAAAGATGGTGA+TGG + chr3_1:44944695-44944714 Msa0358890:intron 40.0%
! GTTTTCTGATGCAGAAGAAG+AGG + chr3_1:44944766-44944785 Msa0358890:intron 40.0%
! GGGATCACTATAATTGGTTC+TGG + chr3_1:44945170-44945189 Msa0358890:intron 40.0%
CACTATCTCTAGCAAACATG+TGG - chr3_1:44945639-44945658 None:intergenic 40.0%
CGCTTGCTTAGCTTAAATTC+TGG + chr3_1:44945717-44945736 Msa0358890:CDS 40.0%
TGTACTATGACCGTAACCTT+TGG + chr3_1:44945881-44945900 Msa0358890:intron 40.0%
!! CGTAACCTTTGGAGATTTTC+AGG + chr3_1:44945892-44945911 Msa0358890:intron 40.0%
GACTTCCTGAAAATCTCCAA+AGG - chr3_1:44945900-44945919 None:intergenic 40.0%
ACTATTCGCTTCTCATGTGA+AGG + chr3_1:44946051-44946070 Msa0358890:intron 40.0%
GAAGCTGAATCAAGCAAAGA+AGG + chr3_1:44946073-44946092 Msa0358890:CDS 40.0%
CAAGCAAAGAAGGAAATGGA+TGG + chr3_1:44946083-44946102 Msa0358890:CDS 40.0%
! ATGGTTAGGTCCAGCTTTAA+AGG + chr3_1:44946102-44946121 Msa0358890:CDS 40.0%
!! TGGTTAGGTCCAGCTTTAAA+GGG + chr3_1:44946103-44946122 Msa0358890:CDS 40.0%
!!! CTTTTCAGTCCCTTTAAAGC+TGG - chr3_1:44946115-44946134 None:intergenic 40.0%
!!! GCGTTGATTTGGTCTCTTTT+AGG - chr3_1:44946371-44946390 None:intergenic 40.0%
TATGAGACTAATCACTGCTC+GGG - chr3_1:44946510-44946529 None:intergenic 40.0%
CTATGAGACTAATCACTGCT+CGG - chr3_1:44946511-44946530 None:intergenic 40.0%
ATCCACATGACCACATGTTT+CGG - chr3_1:44946547-44946566 None:intergenic 40.0%
GGTCATGTGGATATACTCTA+TGG + chr3_1:44946555-44946574 Msa0358890:intron 40.0%
TTATCGGTAGGAACCGAATT+CGG - chr3_1:44946822-44946841 None:intergenic 40.0%
AATGAGCAAGAGACTACCTT+TGG - chr3_1:44947136-44947155 None:intergenic 40.0%
TCTACTTTGTCAAGTGATGG+AGG - chr3_1:44947363-44947382 None:intergenic 40.0%
! GTTTCCTCTAGTTTCCAAAG+GGG + chr3_1:44947791-44947810 Msa0358890:intron 40.0%
TCACTCAAGAGCAGCATTAA+AGG + chr3_1:44947819-44947838 Msa0358890:three_prime_UTR 40.0%
CCTTGAAAGTCCACACAATA+TGG - chr3_1:44939746-44939765 None:intergenic 40.0%
CCATATTGTGTGGACTTTCA+AGG + chr3_1:44939743-44939762 Msa0358890:intron 40.0%
TGCTTCCATACCAAATGAAC+AGG + chr3_1:44939988-44940007 Msa0358890:intron 40.0%
ACTTGCCTGTTCATTTGGTA+TGG - chr3_1:44939996-44940015 None:intergenic 40.0%
TGATCACTTGCCTGTTCATT+TGG - chr3_1:44940001-44940020 None:intergenic 40.0%
GAGAAGAGATAGACCATGTA+AGG + chr3_1:44940380-44940399 Msa0358890:CDS 40.0%
GAGATAGCATTCAACTGCTT+TGG - chr3_1:44940424-44940443 None:intergenic 40.0%
AATTTCAAGGTTGAGTAGGG+TGG - chr3_1:44940464-44940483 None:intergenic 40.0%
TGCTAGCAGATATACCTGAT+TGG - chr3_1:44940576-44940595 None:intergenic 40.0%
!!! GTTATTTTTAGGGAGCTGGT+AGG + chr3_1:44940767-44940786 Msa0358890:intron 40.0%
!! GGGGATTTGAGAGTATTCTA+TGG + chr3_1:44940805-44940824 Msa0358890:CDS 40.0%
TACTACTGGTGTCTACACAT+CGG - chr3_1:44941013-44941032 None:intergenic 40.0%
GTCATTCGATCTTCATCCAA+TGG + chr3_1:44941251-44941270 Msa0358890:intron 40.0%
ACAATACTGTTTGCGACTGT+AGG + chr3_1:44941295-44941314 Msa0358890:intron 40.0%
CAATACTGTTTGCGACTGTA+GGG + chr3_1:44941296-44941315 Msa0358890:intron 40.0%
TACTATCATTCTCGTTTGCC+AGG + chr3_1:44941863-44941882 Msa0358890:CDS 40.0%
ACTATCATTCTCGTTTGCCA+GGG + chr3_1:44941864-44941883 Msa0358890:CDS 40.0%
TTGTGGTTACCTAAAAACCC+TGG - chr3_1:44941884-44941903 None:intergenic 40.0%
!! CTATCTGGTTTCCCTCATTT+TGG + chr3_1:44942318-44942337 Msa0358890:intron 40.0%
AACATTGGGAGCCAAAATGA+GGG - chr3_1:44942332-44942351 None:intergenic 40.0%
CATATGTGAGCAGTGAACAT+TGG - chr3_1:44942347-44942366 None:intergenic 40.0%
ATGAAACTCCACTTCGTTGA+AGG + chr3_1:44942458-44942477 Msa0358890:intron 40.0%
TGAAACTCCACTTCGTTGAA+GGG + chr3_1:44942459-44942478 Msa0358890:intron 40.0%
CCCAAACTTGATCTTGTAAC+TGG + chr3_1:44942559-44942578 Msa0358890:intron 40.0%
CCCAGTTACAAGATCAAGTT+TGG - chr3_1:44942563-44942582 None:intergenic 40.0%
AAATGTTGATGTGACTCGAG+TGG + chr3_1:44942649-44942668 Msa0358890:intron 40.0%
TTGCAGAATGAGCAAAACCA+GGG - chr3_1:44942964-44942983 None:intergenic 40.0%
TTTGCAGAATGAGCAAAACC+AGG - chr3_1:44942965-44942984 None:intergenic 40.0%
CACAGTGGGAGTAAAATAGT+CGG + chr3_1:44943083-44943102 Msa0358890:intron 40.0%
ACAGATAGACACGAGATTAG+TGG + chr3_1:44943133-44943152 Msa0358890:intron 40.0%
CACGAGATTAGTGGAAAACA+TGG + chr3_1:44943142-44943161 Msa0358890:intron 40.0%
TGCTTCCATATCCGATAAGA+AGG + chr3_1:44943210-44943229 Msa0358890:intron 40.0%
GCTTCCATATCCGATAAGAA+GGG + chr3_1:44943211-44943230 Msa0358890:intron 40.0%
GATACCCTTCTTATCGGATA+TGG - chr3_1:44943218-44943237 None:intergenic 40.0%
TTGAGCTTCTCAACTGTTTG+GGG + chr3_1:44943360-44943379 Msa0358890:intron 40.0%
TCCAAGATTGCTTACGGAAA+CGG + chr3_1:44943445-44943464 Msa0358890:intron 40.0%
TTACCGGAATAACTGCTAGA+TGG + chr3_1:44943769-44943788 Msa0358890:intron 40.0%
AAGCCATCTAGCAGTTATTC+CGG - chr3_1:44943775-44943794 None:intergenic 40.0%
GAAAATTCCCCTTTACCTTG+TGG + chr3_1:44943853-44943872 Msa0358890:intron 40.0%
!! TGGTTTTGCCACAAGGTAAA+GGG - chr3_1:44943864-44943883 None:intergenic 40.0%
!! ATGGTTTTGCCACAAGGTAA+AGG - chr3_1:44943865-44943884 None:intergenic 40.0%
TCGAATAGTAAAGGACTCAG+AGG - chr3_1:44943902-44943921 None:intergenic 40.0%
AAACAATTGTGACCACTCTC+CGG + chr3_1:44944284-44944303 Msa0358890:intron 40.0%
CTATTATCATCACATGGCTG+TGG - chr3_1:44944322-44944341 None:intergenic 40.0%
TTGAAGGATCCAACTCTAGT+AGG + chr3_1:44944483-44944502 Msa0358890:intron 40.0%
TCACAATGACCTACTAGAGT+TGG - chr3_1:44944495-44944514 None:intergenic 40.0%
TGACATTATATGGAGGCAGT+GGG + chr3_1:44944547-44944566 Msa0358890:intron 40.0%
CAGGAACTAAAAGATGGTGA+TGG + chr3_1:44944695-44944714 Msa0358890:intron 40.0%
! GTTTTCTGATGCAGAAGAAG+AGG + chr3_1:44944766-44944785 Msa0358890:intron 40.0%
! GGGATCACTATAATTGGTTC+TGG + chr3_1:44945170-44945189 Msa0358890:intron 40.0%
CACTATCTCTAGCAAACATG+TGG - chr3_1:44945639-44945658 None:intergenic 40.0%
CGCTTGCTTAGCTTAAATTC+TGG + chr3_1:44945717-44945736 Msa0358890:CDS 40.0%
TGTACTATGACCGTAACCTT+TGG + chr3_1:44945881-44945900 Msa0358890:intron 40.0%
!! CGTAACCTTTGGAGATTTTC+AGG + chr3_1:44945892-44945911 Msa0358890:intron 40.0%
GACTTCCTGAAAATCTCCAA+AGG - chr3_1:44945900-44945919 None:intergenic 40.0%
ACTATTCGCTTCTCATGTGA+AGG + chr3_1:44946051-44946070 Msa0358890:intron 40.0%
GAAGCTGAATCAAGCAAAGA+AGG + chr3_1:44946073-44946092 Msa0358890:CDS 40.0%
CAAGCAAAGAAGGAAATGGA+TGG + chr3_1:44946083-44946102 Msa0358890:CDS 40.0%
! ATGGTTAGGTCCAGCTTTAA+AGG + chr3_1:44946102-44946121 Msa0358890:CDS 40.0%
!! TGGTTAGGTCCAGCTTTAAA+GGG + chr3_1:44946103-44946122 Msa0358890:CDS 40.0%
!!! CTTTTCAGTCCCTTTAAAGC+TGG - chr3_1:44946115-44946134 None:intergenic 40.0%
!!! GCGTTGATTTGGTCTCTTTT+AGG - chr3_1:44946371-44946390 None:intergenic 40.0%
TATGAGACTAATCACTGCTC+GGG - chr3_1:44946510-44946529 None:intergenic 40.0%
CTATGAGACTAATCACTGCT+CGG - chr3_1:44946511-44946530 None:intergenic 40.0%
ATCCACATGACCACATGTTT+CGG - chr3_1:44946547-44946566 None:intergenic 40.0%
GGTCATGTGGATATACTCTA+TGG + chr3_1:44946555-44946574 Msa0358890:intron 40.0%
TTATCGGTAGGAACCGAATT+CGG - chr3_1:44946822-44946841 None:intergenic 40.0%
AATGAGCAAGAGACTACCTT+TGG - chr3_1:44947136-44947155 None:intergenic 40.0%
TCTACTTTGTCAAGTGATGG+AGG - chr3_1:44947363-44947382 None:intergenic 40.0%
! GTTTCCTCTAGTTTCCAAAG+GGG + chr3_1:44947791-44947810 Msa0358890:intron 40.0%
TCACTCAAGAGCAGCATTAA+AGG + chr3_1:44947819-44947838 Msa0358890:three_prime_UTR 40.0%
! AGGGAACACCTACCATTTTC+TGG + chr3_1:44939763-44939782 Msa0358890:intron 45.0%
! AGCAATGTGGTGGAGGAAAT+AGG - chr3_1:44939815-44939834 None:intergenic 45.0%
AAGAGAATGGAGCAATGTGG+TGG - chr3_1:44939825-44939844 None:intergenic 45.0%
GTGAAGAGAATGGAGCAATG+TGG - chr3_1:44939828-44939847 None:intergenic 45.0%
ATTAGTGTCTGTTTGGAGGG+CGG - chr3_1:44940291-44940310 None:intergenic 45.0%
TCGTGCTTCATAAGCTTTGC+CGG - chr3_1:44940953-44940972 None:intergenic 45.0%
CACAGACACAAACACCACAT+CGG + chr3_1:44940973-44940992 Msa0358890:intron 45.0%
TGTCAGAATCATGTCCGATG+TGG - chr3_1:44940990-44941009 None:intergenic 45.0%
CACTAATACGTGTAGGACAC+CGG + chr3_1:44941091-44941110 Msa0358890:intron 45.0%
TCGCTGCTACATTGTCATTG+AGG + chr3_1:44941135-44941154 Msa0358890:intron 45.0%
CAGTATTGTCACTGTAGTGG+TGG - chr3_1:44941284-44941303 None:intergenic 45.0%
!! GGGTGCTGTTATGTTACATC+AGG + chr3_1:44941589-44941608 Msa0358890:intron 45.0%
GTCCATGGAATTTCAATGGG+TGG + chr3_1:44941620-44941639 Msa0358890:CDS 45.0%
CTCCACCCATTGAAATTCCA+TGG - chr3_1:44941625-44941644 None:intergenic 45.0%
CATGGAATTTCAATGGGTGG+AGG + chr3_1:44941623-44941642 Msa0358890:CDS 45.0%
! GCTACTCCTGAAGCAAGTTT+TGG + chr3_1:44941815-44941834 Msa0358890:CDS 45.0%
! TCTCGTTTGCCAGGGTTTTT+AGG + chr3_1:44941872-44941891 Msa0358890:CDS 45.0%
CTTCGTGATCGTTTGTATCC+TGG + chr3_1:44942052-44942071 Msa0358890:intron 45.0%
GAACATTGGGAGCCAAAATG+AGG - chr3_1:44942333-44942352 None:intergenic 45.0%
CGTATTACTGGAGGGGAATT+GGG - chr3_1:44942372-44942391 None:intergenic 45.0%
ACGTATTACTGGAGGGGAAT+TGG - chr3_1:44942373-44942392 None:intergenic 45.0%
ATTCCCCTCCAGTAATACGT+AGG + chr3_1:44942373-44942392 Msa0358890:intron 45.0%
TGTTCGGTCCTACGTATTAC+TGG - chr3_1:44942384-44942403 None:intergenic 45.0%
!! GATTGGATGGGCTAAGAAGA+AGG - chr3_1:44943035-44943054 None:intergenic 45.0%
TTCGAGGATGACGATTGGAT+GGG - chr3_1:44943047-44943066 None:intergenic 45.0%
TTTGCTTCGAGGATGACGAT+TGG - chr3_1:44943052-44943071 None:intergenic 45.0%
TGAGCTTCTCAACTGTTTGG+GGG + chr3_1:44943361-44943380 Msa0358890:intron 45.0%
TATGAAGCATGGACACTCCT+CGG + chr3_1:44943595-44943614 Msa0358890:intron 45.0%
AGAAGAGTTGGAACGTCTAC+AGG - chr3_1:44943818-44943837 None:intergenic 45.0%
! GGTTTTGCCACAAGGTAAAG+GGG - chr3_1:44943863-44943882 None:intergenic 45.0%
AGAGGTTGTGAAAGATGGCA+TGG - chr3_1:44943884-44943903 None:intergenic 45.0%
GACTCAGAGGTTGTGAAAGA+TGG - chr3_1:44943889-44943908 None:intergenic 45.0%
TAAGATTGTTCGCGGTGAAG+AGG - chr3_1:44943934-44943953 None:intergenic 45.0%
CTCCCAAATCTCTTTAGCAG+TGG + chr3_1:44944253-44944272 Msa0358890:intron 45.0%
!! TTGGTGGGCTTTCTTCAATG+TGG + chr3_1:44944384-44944403 Msa0358890:intron 45.0%
CTGACATTATATGGAGGCAG+TGG + chr3_1:44944546-44944565 Msa0358890:intron 45.0%
GACATTATATGGAGGCAGTG+GGG + chr3_1:44944548-44944567 Msa0358890:intron 45.0%
ACATTATATGGAGGCAGTGG+GGG + chr3_1:44944549-44944568 Msa0358890:intron 45.0%
TGTTGGATAGGTCTGATCAG+TGG + chr3_1:44944600-44944619 Msa0358890:intron 45.0%
!! AAGATGGTGATGGGCTTTGT+TGG + chr3_1:44944705-44944724 Msa0358890:intron 45.0%
GGCAAGGCTGTTTATAATCG+CGG + chr3_1:44944726-44944745 Msa0358890:intron 45.0%
GTTTATAATCGCGGCAGTGA+AGG + chr3_1:44944735-44944754 Msa0358890:intron 45.0%
GTCACGTAGATGTACTCCAA+TGG - chr3_1:44945257-44945276 None:intergenic 45.0%
TGGCCATTGGAAATGCTCTA+AGG + chr3_1:44945486-44945505 Msa0358890:intron 45.0%
GGCCATTGGAAATGCTCTAA+GGG + chr3_1:44945487-44945506 Msa0358890:intron 45.0%
! CACCCTTAGAGCATTTCCAA+TGG - chr3_1:44945492-44945511 None:intergenic 45.0%
GACCAAATCAACGCAAACTG+TGG + chr3_1:44946377-44946396 Msa0358890:intron 45.0%
!! AGCCACAGTTTGCGTTGATT+TGG - chr3_1:44946382-44946401 None:intergenic 45.0%
AACGCAAACTGTGGCTCATT+TGG + chr3_1:44946386-44946405 Msa0358890:intron 45.0%
! TAGCATTGAACTTGTGGGGA+TGG + chr3_1:44946414-44946433 Msa0358890:intron 45.0%
TAGCTGCCGAATACACTGTT+TGG + chr3_1:44946449-44946468 Msa0358890:intron 45.0%
AGCTGCCGAATACACTGTTT+GGG + chr3_1:44946450-44946469 Msa0358890:intron 45.0%
AACCGAAACATGTGGTCATG+TGG + chr3_1:44946542-44946561 Msa0358890:intron 45.0%
TATACTCTTGGATACCACCG+AGG + chr3_1:44946738-44946757 Msa0358890:intron 45.0%
GGAACCGAATTCGGTACTAT+CGG - chr3_1:44946813-44946832 None:intergenic 45.0%
GGATATGTGCAGATTCGTGA+AGG + chr3_1:44946858-44946877 Msa0358890:intron 45.0%
ATGTGCAGATTCGTGAAGGA+AGG + chr3_1:44946862-44946881 Msa0358890:intron 45.0%
TAGAGCTCTCACCATTGACA+AGG + chr3_1:44947102-44947121 Msa0358890:CDS 45.0%
!! TGGAGCATTGTCCTTGTCAA+TGG - chr3_1:44947116-44947135 None:intergenic 45.0%
TGACAAGGACAATGCTCCAA+AGG + chr3_1:44947117-44947136 Msa0358890:CDS 45.0%
GCTTCAGATTCCAGAAAGTG+TGG + chr3_1:44947431-44947450 Msa0358890:CDS 45.0%
! TTCCAGAAAGTGTGGAATGC+AGG + chr3_1:44947439-44947458 Msa0358890:CDS 45.0%
AACCTGCATTCCACACTTTC+TGG - chr3_1:44947444-44947463 None:intergenic 45.0%
! AGAAAGTGTGGAATGCAGGT+TGG + chr3_1:44947443-44947462 Msa0358890:intron 45.0%
! GTTTCCCCTTTGGAAACTAG+AGG - chr3_1:44947798-44947817 None:intergenic 45.0%
CTTGAGTGATGTTTCCCCTT+TGG - chr3_1:44947808-44947827 None:intergenic 45.0%
AGCAGCATTAAAGGCCTCTT+TGG + chr3_1:44947828-44947847 Msa0358890:three_prime_UTR 45.0%
GCTCAAAACACAAGGTATGG+AGG - chr3_1:44947986-44948005 None:intergenic 45.0%
GACCCTAAGCTCAAAACACA+AGG - chr3_1:44947994-44948013 None:intergenic 45.0%
! AGGGAACACCTACCATTTTC+TGG + chr3_1:44939763-44939782 Msa0358890:intron 45.0%
! AGCAATGTGGTGGAGGAAAT+AGG - chr3_1:44939815-44939834 None:intergenic 45.0%
AAGAGAATGGAGCAATGTGG+TGG - chr3_1:44939825-44939844 None:intergenic 45.0%
GTGAAGAGAATGGAGCAATG+TGG - chr3_1:44939828-44939847 None:intergenic 45.0%
ATTAGTGTCTGTTTGGAGGG+CGG - chr3_1:44940291-44940310 None:intergenic 45.0%
TCGTGCTTCATAAGCTTTGC+CGG - chr3_1:44940953-44940972 None:intergenic 45.0%
CACAGACACAAACACCACAT+CGG + chr3_1:44940973-44940992 Msa0358890:intron 45.0%
TGTCAGAATCATGTCCGATG+TGG - chr3_1:44940990-44941009 None:intergenic 45.0%
CACTAATACGTGTAGGACAC+CGG + chr3_1:44941091-44941110 Msa0358890:intron 45.0%
TCGCTGCTACATTGTCATTG+AGG + chr3_1:44941135-44941154 Msa0358890:intron 45.0%
CAGTATTGTCACTGTAGTGG+TGG - chr3_1:44941284-44941303 None:intergenic 45.0%
!! GGGTGCTGTTATGTTACATC+AGG + chr3_1:44941589-44941608 Msa0358890:intron 45.0%
GTCCATGGAATTTCAATGGG+TGG + chr3_1:44941620-44941639 Msa0358890:CDS 45.0%
CTCCACCCATTGAAATTCCA+TGG - chr3_1:44941625-44941644 None:intergenic 45.0%
CATGGAATTTCAATGGGTGG+AGG + chr3_1:44941623-44941642 Msa0358890:CDS 45.0%
! GCTACTCCTGAAGCAAGTTT+TGG + chr3_1:44941815-44941834 Msa0358890:CDS 45.0%
! TCTCGTTTGCCAGGGTTTTT+AGG + chr3_1:44941872-44941891 Msa0358890:CDS 45.0%
CTTCGTGATCGTTTGTATCC+TGG + chr3_1:44942052-44942071 Msa0358890:intron 45.0%
GAACATTGGGAGCCAAAATG+AGG - chr3_1:44942333-44942352 None:intergenic 45.0%
CGTATTACTGGAGGGGAATT+GGG - chr3_1:44942372-44942391 None:intergenic 45.0%
ACGTATTACTGGAGGGGAAT+TGG - chr3_1:44942373-44942392 None:intergenic 45.0%
ATTCCCCTCCAGTAATACGT+AGG + chr3_1:44942373-44942392 Msa0358890:intron 45.0%
TGTTCGGTCCTACGTATTAC+TGG - chr3_1:44942384-44942403 None:intergenic 45.0%
!! GATTGGATGGGCTAAGAAGA+AGG - chr3_1:44943035-44943054 None:intergenic 45.0%
TTCGAGGATGACGATTGGAT+GGG - chr3_1:44943047-44943066 None:intergenic 45.0%
TTTGCTTCGAGGATGACGAT+TGG - chr3_1:44943052-44943071 None:intergenic 45.0%
TGAGCTTCTCAACTGTTTGG+GGG + chr3_1:44943361-44943380 Msa0358890:intron 45.0%
TATGAAGCATGGACACTCCT+CGG + chr3_1:44943595-44943614 Msa0358890:intron 45.0%
AGAAGAGTTGGAACGTCTAC+AGG - chr3_1:44943818-44943837 None:intergenic 45.0%
! GGTTTTGCCACAAGGTAAAG+GGG - chr3_1:44943863-44943882 None:intergenic 45.0%
AGAGGTTGTGAAAGATGGCA+TGG - chr3_1:44943884-44943903 None:intergenic 45.0%
GACTCAGAGGTTGTGAAAGA+TGG - chr3_1:44943889-44943908 None:intergenic 45.0%
TAAGATTGTTCGCGGTGAAG+AGG - chr3_1:44943934-44943953 None:intergenic 45.0%
CTCCCAAATCTCTTTAGCAG+TGG + chr3_1:44944253-44944272 Msa0358890:intron 45.0%
!! TTGGTGGGCTTTCTTCAATG+TGG + chr3_1:44944384-44944403 Msa0358890:intron 45.0%
CTGACATTATATGGAGGCAG+TGG + chr3_1:44944546-44944565 Msa0358890:intron 45.0%
GACATTATATGGAGGCAGTG+GGG + chr3_1:44944548-44944567 Msa0358890:intron 45.0%
ACATTATATGGAGGCAGTGG+GGG + chr3_1:44944549-44944568 Msa0358890:intron 45.0%
TGTTGGATAGGTCTGATCAG+TGG + chr3_1:44944600-44944619 Msa0358890:intron 45.0%
!! AAGATGGTGATGGGCTTTGT+TGG + chr3_1:44944705-44944724 Msa0358890:intron 45.0%
GGCAAGGCTGTTTATAATCG+CGG + chr3_1:44944726-44944745 Msa0358890:intron 45.0%
GTTTATAATCGCGGCAGTGA+AGG + chr3_1:44944735-44944754 Msa0358890:intron 45.0%
GTCACGTAGATGTACTCCAA+TGG - chr3_1:44945257-44945276 None:intergenic 45.0%
TGGCCATTGGAAATGCTCTA+AGG + chr3_1:44945486-44945505 Msa0358890:intron 45.0%
GGCCATTGGAAATGCTCTAA+GGG + chr3_1:44945487-44945506 Msa0358890:intron 45.0%
! CACCCTTAGAGCATTTCCAA+TGG - chr3_1:44945492-44945511 None:intergenic 45.0%
GACCAAATCAACGCAAACTG+TGG + chr3_1:44946377-44946396 Msa0358890:intron 45.0%
!! AGCCACAGTTTGCGTTGATT+TGG - chr3_1:44946382-44946401 None:intergenic 45.0%
AACGCAAACTGTGGCTCATT+TGG + chr3_1:44946386-44946405 Msa0358890:intron 45.0%
! TAGCATTGAACTTGTGGGGA+TGG + chr3_1:44946414-44946433 Msa0358890:intron 45.0%
TAGCTGCCGAATACACTGTT+TGG + chr3_1:44946449-44946468 Msa0358890:intron 45.0%
AGCTGCCGAATACACTGTTT+GGG + chr3_1:44946450-44946469 Msa0358890:intron 45.0%
AACCGAAACATGTGGTCATG+TGG + chr3_1:44946542-44946561 Msa0358890:intron 45.0%
TATACTCTTGGATACCACCG+AGG + chr3_1:44946738-44946757 Msa0358890:intron 45.0%
GGAACCGAATTCGGTACTAT+CGG - chr3_1:44946813-44946832 None:intergenic 45.0%
GGATATGTGCAGATTCGTGA+AGG + chr3_1:44946858-44946877 Msa0358890:intron 45.0%
ATGTGCAGATTCGTGAAGGA+AGG + chr3_1:44946862-44946881 Msa0358890:intron 45.0%
TAGAGCTCTCACCATTGACA+AGG + chr3_1:44947102-44947121 Msa0358890:CDS 45.0%
!! TGGAGCATTGTCCTTGTCAA+TGG - chr3_1:44947116-44947135 None:intergenic 45.0%
TGACAAGGACAATGCTCCAA+AGG + chr3_1:44947117-44947136 Msa0358890:CDS 45.0%
GCTTCAGATTCCAGAAAGTG+TGG + chr3_1:44947431-44947450 Msa0358890:CDS 45.0%
! TTCCAGAAAGTGTGGAATGC+AGG + chr3_1:44947439-44947458 Msa0358890:CDS 45.0%
AACCTGCATTCCACACTTTC+TGG - chr3_1:44947444-44947463 None:intergenic 45.0%
! AGAAAGTGTGGAATGCAGGT+TGG + chr3_1:44947443-44947462 Msa0358890:intron 45.0%
! GTTTCCCCTTTGGAAACTAG+AGG - chr3_1:44947798-44947817 None:intergenic 45.0%
CTTGAGTGATGTTTCCCCTT+TGG - chr3_1:44947808-44947827 None:intergenic 45.0%
AGCAGCATTAAAGGCCTCTT+TGG + chr3_1:44947828-44947847 Msa0358890:three_prime_UTR 45.0%
GCTCAAAACACAAGGTATGG+AGG - chr3_1:44947986-44948005 None:intergenic 45.0%
GACCCTAAGCTCAAAACACA+AGG - chr3_1:44947994-44948013 None:intergenic 45.0%
!! AAAAAAAAAAAATAATTTCA+AGG - chr3_1:44940477-44940496 None:intergenic 5.0%
!! AAAATATATAATAACTAATA+GGG - chr3_1:44940701-44940720 None:intergenic 5.0%
!!! ATTAAATCTAAAATAATTAA+AGG + chr3_1:44944870-44944889 Msa0358890:intron 5.0%
!!! CTTAATTATTTTTTTTTTAA+AGG + chr3_1:44944955-44944974 Msa0358890:intron 5.0%
!! AAAAAAATAATAATAATTAG+TGG + chr3_1:44945082-44945101 Msa0358890:intron 5.0%
!! TTAATTTATATTATTAAAAG+AGG + chr3_1:44947709-44947728 Msa0358890:three_prime_UTR 5.0%
!! AAAAAAAAAAAATAATTTCA+AGG - chr3_1:44940477-44940496 None:intergenic 5.0%
!! AAAATATATAATAACTAATA+GGG - chr3_1:44940701-44940720 None:intergenic 5.0%
!!! ATTAAATCTAAAATAATTAA+AGG + chr3_1:44944870-44944889 Msa0358890:intron 5.0%
!!! CTTAATTATTTTTTTTTTAA+AGG + chr3_1:44944955-44944974 Msa0358890:intron 5.0%
!! AAAAAAATAATAATAATTAG+TGG + chr3_1:44945082-44945101 Msa0358890:intron 5.0%
!! TTAATTTATATTATTAAAAG+AGG + chr3_1:44947709-44947728 Msa0358890:three_prime_UTR 5.0%
AGAATGGAGCAATGTGGTGG+AGG - chr3_1:44939822-44939841 None:intergenic 50.0%
GAATGCTATCTCACCTGACC+TGG + chr3_1:44940432-44940451 Msa0358890:CDS 50.0%
! TGAGTAGGGTGGACTTTACC+AGG - chr3_1:44940453-44940472 None:intergenic 50.0%
CGTGCTTCATAAGCTTTGCC+GGG - chr3_1:44940952-44940971 None:intergenic 50.0%
!! GTCACTGTAGTGGTGGATGT+CGG - chr3_1:44941277-44941296 None:intergenic 50.0%
TACTGTTTGCGACTGTAGGG+AGG + chr3_1:44941299-44941318 Msa0358890:intron 50.0%
AGGGGATTCATGCCTTGAAG+TGG + chr3_1:44941414-44941433 Msa0358890:intron 50.0%
! CATCAGGTTGCTCTTGTCCA+TGG + chr3_1:44941605-44941624 Msa0358890:intron 50.0%
GGTGAATACTTGGCGCTTAC+TGG + chr3_1:44942213-44942232 Msa0358890:intron 50.0%
CTTACTGGAGCACGGTTGAA+TGG + chr3_1:44942228-44942247 Msa0358890:intron 50.0%
TGGAGCACGGTTGAATGGAA+AGG + chr3_1:44942233-44942252 Msa0358890:intron 50.0%
GGAAAGGAATTAGTTGCGGC+TGG + chr3_1:44942249-44942268 Msa0358890:CDS 50.0%
GGTCCTACGTATTACTGGAG+GGG - chr3_1:44942379-44942398 None:intergenic 50.0%
CGGTCCTACGTATTACTGGA+GGG - chr3_1:44942380-44942399 None:intergenic 50.0%
TCGGTCCTACGTATTACTGG+AGG - chr3_1:44942381-44942400 None:intergenic 50.0%
! GGCTCTGCAACCTTGTTTGT+TGG - chr3_1:44942843-44942862 None:intergenic 50.0%
CTTCGAGGATGACGATTGGA+TGG - chr3_1:44943048-44943067 None:intergenic 50.0%
GCCGTTTCCGTAAGCAATCT+TGG - chr3_1:44943449-44943468 None:intergenic 50.0%
TCTAGTGCTTAGGCCCTCTT+TGG - chr3_1:44943559-44943578 None:intergenic 50.0%
TCCTCGGATTATGAGTGTCC+CGG + chr3_1:44943611-44943630 Msa0358890:intron 50.0%
CCTATATGAAGCACGGACAC+CGG - chr3_1:44943737-44943756 None:intergenic 50.0%
GGAACGTCTACAGGCTCTTA+TGG - chr3_1:44943809-44943828 None:intergenic 50.0%
!! GATGGCATGGTTTTGCCACA+AGG - chr3_1:44943871-44943890 None:intergenic 50.0%
AATTCCATGACTCCGGAGAG+TGG - chr3_1:44944299-44944318 None:intergenic 50.0%
GCTGTGGAATTCCATGACTC+CGG - chr3_1:44944306-44944325 None:intergenic 50.0%
! TTGTGTGGTGCAAGTGCTGT+TGG + chr3_1:44944583-44944602 Msa0358890:intron 50.0%
! TGGTGCAAGTGCTGTTGGAT+AGG + chr3_1:44944588-44944607 Msa0358890:intron 50.0%
TGGATAGGTCTGATCAGTGG+AGG + chr3_1:44944603-44944622 Msa0358890:intron 50.0%
GGATAGGTCTGATCAGTGGA+GGG + chr3_1:44944604-44944623 Msa0358890:intron 50.0%
TTACTGCCGAGAAATACGGC+AGG + chr3_1:44944660-44944679 Msa0358890:intron 50.0%
GGCTATCCTGCCGTATTTCT+CGG - chr3_1:44944669-44944688 None:intergenic 50.0%
TATAATCGCGGCAGTGAAGG+TGG + chr3_1:44944738-44944757 Msa0358890:intron 50.0%
TGCCGAATACACTGTTTGGG+AGG + chr3_1:44946453-44946472 Msa0358890:intron 50.0%
GCCGAATACACTGTTTGGGA+GGG + chr3_1:44946454-44946473 Msa0358890:intron 50.0%
CCCCTCCCAAACAGTGTATT+CGG - chr3_1:44946458-44946477 None:intergenic 50.0%
CCGAATACACTGTTTGGGAG+GGG + chr3_1:44946455-44946474 Msa0358890:intron 50.0%
CGAATACACTGTTTGGGAGG+GGG + chr3_1:44946456-44946475 Msa0358890:intron 50.0%
GAATACACTGTTTGGGAGGG+GGG + chr3_1:44946457-44946476 Msa0358890:intron 50.0%
AGAATGGAGCAATGTGGTGG+AGG - chr3_1:44939822-44939841 None:intergenic 50.0%
GAATGCTATCTCACCTGACC+TGG + chr3_1:44940432-44940451 Msa0358890:CDS 50.0%
! TGAGTAGGGTGGACTTTACC+AGG - chr3_1:44940453-44940472 None:intergenic 50.0%
CGTGCTTCATAAGCTTTGCC+GGG - chr3_1:44940952-44940971 None:intergenic 50.0%
!! GTCACTGTAGTGGTGGATGT+CGG - chr3_1:44941277-44941296 None:intergenic 50.0%
TACTGTTTGCGACTGTAGGG+AGG + chr3_1:44941299-44941318 Msa0358890:intron 50.0%
AGGGGATTCATGCCTTGAAG+TGG + chr3_1:44941414-44941433 Msa0358890:intron 50.0%
! CATCAGGTTGCTCTTGTCCA+TGG + chr3_1:44941605-44941624 Msa0358890:intron 50.0%
GGTGAATACTTGGCGCTTAC+TGG + chr3_1:44942213-44942232 Msa0358890:intron 50.0%
CTTACTGGAGCACGGTTGAA+TGG + chr3_1:44942228-44942247 Msa0358890:intron 50.0%
TGGAGCACGGTTGAATGGAA+AGG + chr3_1:44942233-44942252 Msa0358890:intron 50.0%
GGAAAGGAATTAGTTGCGGC+TGG + chr3_1:44942249-44942268 Msa0358890:CDS 50.0%
GGTCCTACGTATTACTGGAG+GGG - chr3_1:44942379-44942398 None:intergenic 50.0%
CGGTCCTACGTATTACTGGA+GGG - chr3_1:44942380-44942399 None:intergenic 50.0%
TCGGTCCTACGTATTACTGG+AGG - chr3_1:44942381-44942400 None:intergenic 50.0%
! GGCTCTGCAACCTTGTTTGT+TGG - chr3_1:44942843-44942862 None:intergenic 50.0%
CTTCGAGGATGACGATTGGA+TGG - chr3_1:44943048-44943067 None:intergenic 50.0%
GCCGTTTCCGTAAGCAATCT+TGG - chr3_1:44943449-44943468 None:intergenic 50.0%
TCTAGTGCTTAGGCCCTCTT+TGG - chr3_1:44943559-44943578 None:intergenic 50.0%
TCCTCGGATTATGAGTGTCC+CGG + chr3_1:44943611-44943630 Msa0358890:intron 50.0%
CCTATATGAAGCACGGACAC+CGG - chr3_1:44943737-44943756 None:intergenic 50.0%
GGAACGTCTACAGGCTCTTA+TGG - chr3_1:44943809-44943828 None:intergenic 50.0%
!! GATGGCATGGTTTTGCCACA+AGG - chr3_1:44943871-44943890 None:intergenic 50.0%
AATTCCATGACTCCGGAGAG+TGG - chr3_1:44944299-44944318 None:intergenic 50.0%
GCTGTGGAATTCCATGACTC+CGG - chr3_1:44944306-44944325 None:intergenic 50.0%
! TTGTGTGGTGCAAGTGCTGT+TGG + chr3_1:44944583-44944602 Msa0358890:intron 50.0%
! TGGTGCAAGTGCTGTTGGAT+AGG + chr3_1:44944588-44944607 Msa0358890:intron 50.0%
TGGATAGGTCTGATCAGTGG+AGG + chr3_1:44944603-44944622 Msa0358890:intron 50.0%
GGATAGGTCTGATCAGTGGA+GGG + chr3_1:44944604-44944623 Msa0358890:intron 50.0%
TTACTGCCGAGAAATACGGC+AGG + chr3_1:44944660-44944679 Msa0358890:intron 50.0%
GGCTATCCTGCCGTATTTCT+CGG - chr3_1:44944669-44944688 None:intergenic 50.0%
TATAATCGCGGCAGTGAAGG+TGG + chr3_1:44944738-44944757 Msa0358890:intron 50.0%
TGCCGAATACACTGTTTGGG+AGG + chr3_1:44946453-44946472 Msa0358890:intron 50.0%
GCCGAATACACTGTTTGGGA+GGG + chr3_1:44946454-44946473 Msa0358890:intron 50.0%
CCCCTCCCAAACAGTGTATT+CGG - chr3_1:44946458-44946477 None:intergenic 50.0%
CCGAATACACTGTTTGGGAG+GGG + chr3_1:44946455-44946474 Msa0358890:intron 50.0%
CGAATACACTGTTTGGGAGG+GGG + chr3_1:44946456-44946475 Msa0358890:intron 50.0%
GAATACACTGTTTGGGAGGG+GGG + chr3_1:44946457-44946476 Msa0358890:intron 50.0%
! AGGGTGGACTTTACCAGGTC+AGG - chr3_1:44940448-44940467 None:intergenic 55.0%
GTAGGGCTTTCTGTGCTGGA+GGG + chr3_1:44940785-44940804 Msa0358890:CDS 55.0%
TAGGGCTTTCTGTGCTGGAG+GGG + chr3_1:44940786-44940805 Msa0358890:CDS 55.0%
AGCAGTCACGATTTCGACCG+AGG + chr3_1:44941163-44941182 Msa0358890:intron 55.0%
!! TAGTGGTGGATGTCGGCCAT+TGG - chr3_1:44941270-44941289 None:intergenic 55.0%
ACTTGGCGCTTACTGGAGCA+CGG + chr3_1:44942220-44942239 Msa0358890:intron 55.0%
GGAATTAGTTGCGGCTGGAC+TGG + chr3_1:44942254-44942273 Msa0358890:CDS 55.0%
GTCGACACCCTTCAACGAAG+TGG - chr3_1:44942469-44942488 None:intergenic 55.0%
!! TCGTTGAAGGGTGTCGACAC+AGG + chr3_1:44942471-44942490 Msa0358890:intron 55.0%
ACCGGGACACTCATAATCCG+AGG - chr3_1:44943615-44943634 None:intergenic 55.0%
CCGGTGTCCGTGCTTCATAT+AGG + chr3_1:44943734-44943753 Msa0358890:intron 55.0%
GAAAGGCTTGTGCGCTGAGT+TGG - chr3_1:44944133-44944152 None:intergenic 55.0%
TATATGGAGGCAGTGGGGGA+CGG + chr3_1:44944553-44944572 Msa0358890:intron 55.0%
!! GGTGATGGGCTTTGTTGGCA+AGG + chr3_1:44944710-44944729 Msa0358890:intron 55.0%
CAACCACTTGCGCTAGACCT+CGG - chr3_1:44946758-44946777 None:intergenic 55.0%
CACACACGCACACGCATCAT+AGG - chr3_1:44947219-44947238 None:intergenic 55.0%
GATGCGTGTGCGTGTGTGTT+AGG + chr3_1:44947221-44947240 Msa0358890:intron 55.0%
! AGGGTGGACTTTACCAGGTC+AGG - chr3_1:44940448-44940467 None:intergenic 55.0%
GTAGGGCTTTCTGTGCTGGA+GGG + chr3_1:44940785-44940804 Msa0358890:CDS 55.0%
TAGGGCTTTCTGTGCTGGAG+GGG + chr3_1:44940786-44940805 Msa0358890:CDS 55.0%
AGCAGTCACGATTTCGACCG+AGG + chr3_1:44941163-44941182 Msa0358890:intron 55.0%
!! TAGTGGTGGATGTCGGCCAT+TGG - chr3_1:44941270-44941289 None:intergenic 55.0%
ACTTGGCGCTTACTGGAGCA+CGG + chr3_1:44942220-44942239 Msa0358890:intron 55.0%
GGAATTAGTTGCGGCTGGAC+TGG + chr3_1:44942254-44942273 Msa0358890:CDS 55.0%
GTCGACACCCTTCAACGAAG+TGG - chr3_1:44942469-44942488 None:intergenic 55.0%
!! TCGTTGAAGGGTGTCGACAC+AGG + chr3_1:44942471-44942490 Msa0358890:intron 55.0%
ACCGGGACACTCATAATCCG+AGG - chr3_1:44943615-44943634 None:intergenic 55.0%
CCGGTGTCCGTGCTTCATAT+AGG + chr3_1:44943734-44943753 Msa0358890:intron 55.0%
GAAAGGCTTGTGCGCTGAGT+TGG - chr3_1:44944133-44944152 None:intergenic 55.0%
TATATGGAGGCAGTGGGGGA+CGG + chr3_1:44944553-44944572 Msa0358890:intron 55.0%
!! GGTGATGGGCTTTGTTGGCA+AGG + chr3_1:44944710-44944729 Msa0358890:intron 55.0%
CAACCACTTGCGCTAGACCT+CGG - chr3_1:44946758-44946777 None:intergenic 55.0%
CACACACGCACACGCATCAT+AGG - chr3_1:44947219-44947238 None:intergenic 55.0%
GATGCGTGTGCGTGTGTGTT+AGG + chr3_1:44947221-44947240 Msa0358890:intron 55.0%
GCTGGTAGGGCTTTCTGTGC+TGG + chr3_1:44940781-44940800 Msa0358890:CDS 60.0%
GGTAGGGCTTTCTGTGCTGG+AGG + chr3_1:44940784-44940803 Msa0358890:CDS 60.0%
GGACACAGACACTGACACGC+CGG - chr3_1:44943716-44943735 None:intergenic 60.0%
GGCGTGTCAGTGTCTGTGTC+CGG + chr3_1:44943715-44943734 Msa0358890:intron 60.0%
GTGACCACTCTCCGGAGTCA+TGG + chr3_1:44944292-44944311 Msa0358890:intron 60.0%
ATATGGAGGCAGTGGGGGAC+GGG + chr3_1:44944554-44944573 Msa0358890:intron 60.0%
CGGCAGGATAGCCTGCAAAC+AGG + chr3_1:44944676-44944695 Msa0358890:intron 60.0%
GCTGGTAGGGCTTTCTGTGC+TGG + chr3_1:44940781-44940800 Msa0358890:CDS 60.0%
GGTAGGGCTTTCTGTGCTGG+AGG + chr3_1:44940784-44940803 Msa0358890:CDS 60.0%
GGACACAGACACTGACACGC+CGG - chr3_1:44943716-44943735 None:intergenic 60.0%
GGCGTGTCAGTGTCTGTGTC+CGG + chr3_1:44943715-44943734 Msa0358890:intron 60.0%
GTGACCACTCTCCGGAGTCA+TGG + chr3_1:44944292-44944311 Msa0358890:intron 60.0%
ATATGGAGGCAGTGGGGGAC+GGG + chr3_1:44944554-44944573 Msa0358890:intron 60.0%
CGGCAGGATAGCCTGCAAAC+AGG + chr3_1:44944676-44944695 Msa0358890:intron 60.0%
! TCCCGGTGTCAGACACGCGT+CGG + chr3_1:44943628-44943647 Msa0358890:intron 65.0%
ACCGACGCGTGTCTGACACC+GGG - chr3_1:44943632-44943651 None:intergenic 65.0%
CACCGACGCGTGTCTGACAC+CGG - chr3_1:44943633-44943652 None:intergenic 65.0%
GGGGACGGGAGAGAGTTGTG+TGG + chr3_1:44944568-44944587 Msa0358890:intron 65.0%
TCGCGGCAGTGAAGGTGGCT+AGG + chr3_1:44944743-44944762 Msa0358890:intron 65.0%
CGCGGCAGTGAAGGTGGCTA+GGG + chr3_1:44944744-44944763 Msa0358890:intron 65.0%
CCACTTGCGCTAGACCTCGG+TGG - chr3_1:44946755-44946774 None:intergenic 65.0%
CCACCGAGGTCTAGCGCAAG+TGG + chr3_1:44946752-44946771 Msa0358890:intron 65.0%
! TCCCGGTGTCAGACACGCGT+CGG + chr3_1:44943628-44943647 Msa0358890:intron 65.0%
ACCGACGCGTGTCTGACACC+GGG - chr3_1:44943632-44943651 None:intergenic 65.0%
CACCGACGCGTGTCTGACAC+CGG - chr3_1:44943633-44943652 None:intergenic 65.0%
GGGGACGGGAGAGAGTTGTG+TGG + chr3_1:44944568-44944587 Msa0358890:intron 65.0%
TCGCGGCAGTGAAGGTGGCT+AGG + chr3_1:44944743-44944762 Msa0358890:intron 65.0%
CGCGGCAGTGAAGGTGGCTA+GGG + chr3_1:44944744-44944763 Msa0358890:intron 65.0%
CCACTTGCGCTAGACCTCGG+TGG - chr3_1:44946755-44946774 None:intergenic 65.0%
CCACCGAGGTCTAGCGCAAG+TGG + chr3_1:44946752-44946771 Msa0358890:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 44939636 44948015 44939636 ID=Msa0358890;Name=Msa0358890
chr3_1 mRNA 44939636 44948015 44939636 ID=Msa0358890-mRNA-1;Parent=Msa0358890;Name=Msa0358890-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|0.8|0.87|0.93|0.73|0.68|16|320|341
chr3_1 exon 44939636 44939641 44939636 ID=Msa0358890-mRNA-1:exon:7929;Parent=Msa0358890-mRNA-1
chr3_1 exon 44940370 44940453 44940370 ID=Msa0358890-mRNA-1:exon:7930;Parent=Msa0358890-mRNA-1
chr3_1 exon 44940581 44940649 44940581 ID=Msa0358890-mRNA-1:exon:7931;Parent=Msa0358890-mRNA-1
chr3_1 exon 44940778 44940841 44940778 ID=Msa0358890-mRNA-1:exon:7932;Parent=Msa0358890-mRNA-1
chr3_1 exon 44941416 44941489 44941416 ID=Msa0358890-mRNA-1:exon:7933;Parent=Msa0358890-mRNA-1
chr3_1 exon 44941611 44941694 44941611 ID=Msa0358890-mRNA-1:exon:7934;Parent=Msa0358890-mRNA-1
chr3_1 exon 44941809 44941893 44941809 ID=Msa0358890-mRNA-1:exon:7935;Parent=Msa0358890-mRNA-1
chr3_1 exon 44942238 44942299 44942238 ID=Msa0358890-mRNA-1:exon:7936;Parent=Msa0358890-mRNA-1
chr3_1 exon 44945696 44945817 44945696 ID=Msa0358890-mRNA-1:exon:7937;Parent=Msa0358890-mRNA-1
chr3_1 exon 44945914 44945974 44945914 ID=Msa0358890-mRNA-1:exon:7938;Parent=Msa0358890-mRNA-1
chr3_1 exon 44946073 44946171 44946073 ID=Msa0358890-mRNA-1:exon:7939;Parent=Msa0358890-mRNA-1
chr3_1 exon 44947097 44947138 44947097 ID=Msa0358890-mRNA-1:exon:7940;Parent=Msa0358890-mRNA-1
chr3_1 exon 44947354 44947460 44947354 ID=Msa0358890-mRNA-1:exon:7941;Parent=Msa0358890-mRNA-1
chr3_1 exon 44947554 44947629 44947554 ID=Msa0358890-mRNA-1:exon:7942;Parent=Msa0358890-mRNA-1
chr3_1 exon 44947672 44947768 44947672 ID=Msa0358890-mRNA-1:exon:7943;Parent=Msa0358890-mRNA-1
chr3_1 exon 44947802 44948015 44947802 ID=Msa0358890-mRNA-1:exon:7944;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44939636 44939641 44939636 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44940370 44940453 44940370 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44940581 44940649 44940581 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44940778 44940841 44940778 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44941416 44941489 44941416 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44941611 44941694 44941611 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44941809 44941893 44941809 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44942238 44942299 44942238 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44945696 44945817 44945696 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44945914 44945974 44945914 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44946073 44946171 44946073 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44947097 44947138 44947097 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44947354 44947460 44947354 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 CDS 44947554 44947620 44947554 ID=Msa0358890-mRNA-1:cds;Parent=Msa0358890-mRNA-1
chr3_1 three_prime_UTR 44947621 44947629 44947621 ID=Msa0358890-mRNA-1:three_prime_utr;Parent=Msa0358890-mRNA-1
chr3_1 three_prime_UTR 44947672 44947768 44947672 ID=Msa0358890-mRNA-1:three_prime_utr;Parent=Msa0358890-mRNA-1
chr3_1 three_prime_UTR 44947802 44948015 44947802 ID=Msa0358890-mRNA-1:three_prime_utr;Parent=Msa0358890-mRNA-1
Gene Sequence

>Msa0358890

AAAACTGATGTTCTTGGAGAAGAGATAGACCATGTAAGGGTAATTACTTTGAACAGACCAAAGCAGTTGAATGCTATCTCACCTGACCTGGTATATCTGCTAGCAGAATATTTGGAAAAATGGGAGAAAGATGACAAAGCAGATATAATTATCTTGAAGGGAGCTGGTAGGGCTTTCTGTGCTGGAGGGGATTTGAGAGTATTCTATGGTGGCAAGACAACAAGGGATTCATGCCTTGAAGTGGTGTACAGATTTTACTGGCTTTGCCATCACATTAGTACCTATAAGAAAACTCAGGTTGCTCTTGTCCATGGAATTTCAATGGGTGGAGGTGCAGCATTGATGATCCCATTGAAATTCTCACTTGTAACAGAAAAAACAGTCTTTGCTACTCCTGAAGCAAGTTTTGGATTTCATACTGATTGTGGCTTCTCATACTATCATTCTCGTTTGCCAGGGTTTTTAGCACGGTTGAATGGAAAGGAATTAGTTGCGGCTGGACTGGCAACTCATTTTGTCACTTCTGAGAAAATTGTTGAGCTAGAGAAGCGCTTGCTTAGCTTAAATTCTGGTGACGAGAATGCTGTGAGATCAGTTATTGAAGAATTTTCATCAGAAGTTAAACTTGATGAAGAGAGTATCCTAAACAAGAAGTCAATAATTGATGAGTGTTTCTCAAAGGATTCTGTTGAAGAAATTATAAAATCATTGGAAGCTGAATCAAGCAAAGAAGGAAATGGATGGTTAGGTCCAGCTTTAAAGGGACTGAAAAGATCATCACCTACTGCATTGAAAATAGCATTAAGATCGGGTATTAGAGCTCTCACCATTGACAAGGACAATGCTCCAAAGTGGGATCCTCCATCACTTGACAAAGTAGATGATGAGAAGTTGGACTTAATTTTTAAGCCTTTTGACAAAGAATTAGAGCTTCAGATTCCAGAAAGTGTGGAATGCAGGTGGGATGGTAAATACGAGAATTCAGCTTATGCTGTTCCAAATAGAGAAACACAAATATCAGCTTAG

Protein sequence

>Msa0358890

KTDVLGEEIDHVRVITLNRPKQLNAISPDLVYLLAEYLEKWEKDDKADIIILKGAGRAFCAGGDLRVFYGGKTTRDSCLEVVYRFYWLCHHISTYKKTQVALVHGISMGGGAALMIPLKFSLVTEKTVFATPEASFGFHTDCGFSYYHSRLPGFLARLNGKELVAAGLATHFVTSEKIVELEKRLLSLNSGDENAVRSVIEEFSSEVKLDEESILNKKSIIDECFSKDSVEEIIKSLEAESSKEGNGWLGPALKGLKRSSPTALKIALRSGIRALTIDKDNAPKWDPPSLDKVDDEKLDLIFKPFDKELELQIPESVECRWDGKYENSAYAVPNRETQISA*