AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239770 MtrunA17_Chr8g0351571 95.000 160 1 1 1 153 1 160 3.14e-110 310
Msa1239770 MtrunA17_Chr5g0401141 54.839 155 63 1 3 150 347 501 3.02e-53 177
Msa1239770 MtrunA17_Chr7g0266721 50.993 151 67 1 3 146 12 162 1.58e-51 161
Msa1239770 MtrunA17_Chr2g0321111 48.684 152 71 1 2 146 463 614 3.59e-46 158
Msa1239770 MtrunA17_Chr8g0374621 48.993 149 56 4 10 139 18 165 5.99e-38 132
Msa1239770 MtrunA17_Chr4g0045321 49.007 151 57 5 10 141 18 167 7.35e-37 129
Msa1239770 MtrunA17_Chr7g0260441 55.906 127 43 4 12 126 23 148 2.75e-34 126
Msa1239770 MtrunA17_Chr7g0274841 51.938 129 50 3 10 127 18 145 1.43e-33 116
Msa1239770 MtrunA17_Chr7g0270991 48.980 147 65 5 8 150 108 248 1.58e-32 115
Msa1239770 MtrunA17_Chr6g0484281 40.719 167 82 4 1 151 1 166 2.95e-32 120
Msa1239770 MtrunA17_Chr1g0213971 46.207 145 66 5 9 142 93 236 4.76e-32 114
Msa1239770 MtrunA17_Chr1g0193711 56.000 125 48 4 10 129 99 221 5.41e-32 114
Msa1239770 MtrunA17_Chr2g0288371 43.671 158 80 2 3 151 15 172 8.14e-32 118
Msa1239770 MtrunA17_Chr8g0357591 40.120 167 83 4 1 151 1 166 5.24e-31 116
Msa1239770 MtrunA17_Chr4g0038431 52.308 130 46 5 10 126 18 144 7.81e-31 109
Msa1239770 MtrunA17_Chr8g0353571 51.639 122 49 3 10 122 32 152 3.11e-30 108
Msa1239770 MtrunA17_Chr3g0113441 49.618 131 54 4 8 127 76 205 3.37e-30 109
Msa1239770 MtrunA17_Chr3g0104751 48.855 131 55 4 8 127 46 175 4.81e-30 108
Msa1239770 MtrunA17_Chr3g0145501 48.485 132 52 5 9 127 25 153 2.27e-29 105
Msa1239770 MtrunA17_Chr4g0037281 49.153 118 48 4 21 127 72 188 9.81e-27 100
Msa1239770 MtrunA17_Chr3g0138061 39.516 124 62 3 15 126 29 151 4.47e-20 85.9
Msa1239770 MtrunA17_Chr1g0149061 39.516 124 61 4 15 126 26 147 3.23e-18 80.5
Msa1239770 MtrunA17_Chr1g0199071 36.066 122 70 3 4 124 83 197 1.11e-16 73.9
Msa1239770 MtrunA17_Chr1g0163031 36.290 124 68 4 4 124 82 197 1.42e-16 73.6
Msa1239770 MtrunA17_Chr5g0416441 31.724 145 79 5 3 135 28 164 3.20e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239770 AT1G01940.1 87.500 160 13 1 1 153 1 160 7.83e-104 294
Msa1239770 AT2G36130.1 51.316 152 67 1 2 146 11 162 7.55e-52 162
Msa1239770 AT5G67530.1 52.258 155 67 1 3 150 346 500 7.38e-51 171
Msa1239770 AT3G44600.1 49.342 152 70 1 2 146 477 628 2.90e-46 159
Msa1239770 AT4G33060.1 48.252 143 65 3 3 136 15 157 1.86e-37 134
Msa1239770 AT3G63400.2 53.968 126 45 3 12 125 23 147 9.20e-36 127
Msa1239770 AT3G63400.3 53.968 126 45 3 12 125 23 147 8.32e-35 127
Msa1239770 AT3G63400.4 53.968 126 45 3 12 125 23 147 8.32e-35 127
Msa1239770 AT3G63400.1 53.968 126 45 3 12 125 23 147 8.32e-35 127
Msa1239770 AT4G34870.1 51.493 134 49 4 7 127 15 145 6.10e-34 117
Msa1239770 AT2G15790.1 53.125 128 47 3 10 125 18 144 1.89e-33 120
Msa1239770 AT5G13120.2 48.227 141 61 5 10 139 103 242 6.19e-33 117
Msa1239770 AT5G13120.1 48.227 141 61 5 10 139 107 246 7.00e-33 117
Msa1239770 AT3G56070.1 51.181 127 50 3 10 125 18 143 8.71e-33 114
Msa1239770 AT3G56070.2 51.181 127 50 3 10 125 18 143 8.71e-33 114
Msa1239770 AT3G62030.3 55.372 121 49 3 10 126 108 227 4.76e-32 115
Msa1239770 AT3G62030.1 55.372 121 49 3 10 126 109 228 5.36e-32 115
Msa1239770 AT3G55920.1 51.163 129 51 3 10 127 73 200 5.57e-32 114
Msa1239770 AT2G21130.1 51.938 129 50 4 10 127 19 146 8.20e-32 112
Msa1239770 AT3G62030.2 55.372 121 49 3 10 126 162 281 1.70e-31 115
Msa1239770 AT1G53720.2 38.554 166 87 3 1 151 1 166 2.99e-31 115
Msa1239770 AT4G38740.1 49.612 129 53 3 10 127 18 145 3.61e-31 110
Msa1239770 AT1G53720.1 38.554 166 87 3 1 151 1 166 9.21e-31 115
Msa1239770 AT2G29960.1 49.612 129 53 4 10 127 46 173 3.13e-30 108
Msa1239770 AT2G29960.3 49.612 129 53 4 10 127 46 173 3.13e-30 108
Msa1239770 AT2G16600.1 48.837 129 50 4 10 125 19 144 3.45e-29 105
Msa1239770 AT5G58710.1 47.287 129 56 3 10 127 49 176 7.25e-28 102
Msa1239770 AT2G38730.1 49.593 123 50 4 10 122 46 166 2.56e-26 99.0
Msa1239770 AT4G34960.1 45.736 129 58 4 9 126 60 187 9.36e-26 97.8
Msa1239770 AT2G29960.2 44.961 129 49 5 10 127 46 163 1.98e-23 91.3
Msa1239770 AT2G16600.2 45.763 118 48 3 10 125 19 122 3.43e-23 89.4
Msa1239770 AT4G34960.2 47.273 110 46 4 9 107 60 168 2.70e-21 85.1
Msa1239770 AT4G32420.1 38.710 124 63 4 15 126 26 148 4.18e-15 72.0
Msa1239770 AT4G32420.5 38.710 124 63 4 15 126 26 148 4.18e-15 72.0
Msa1239770 AT4G32420.3 38.710 124 63 4 15 126 26 148 4.18e-15 72.0
Msa1239770 AT4G32420.6 38.710 124 63 4 15 126 26 148 4.18e-15 72.0
Msa1239770 AT4G32420.4 38.710 124 63 4 15 126 26 148 4.63e-15 71.6
Msa1239770 AT2G47320.1 32.000 150 91 3 4 146 81 226 4.15e-14 67.4
Msa1239770 AT1G53780.2 39.326 89 46 2 71 151 4 92 1.24e-12 64.7

Find 55 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTTCACCGCAATATTAA+AGG 0.210104 8_2:+21704775 Msa1239770:CDS
AACTGACTTCCATTAGTATT+TGG 0.214721 8_2:-21705425 None:intergenic
GAATCAAACGAGAGTGTTTC+TGG 0.225474 8_2:-21704352 None:intergenic
AGAAGTTAGATCTATTGTTT+TGG 0.279029 8_2:-21706390 None:intergenic
TGACAAACCATCCATTAAAA+TGG 0.307222 8_2:-21706601 None:intergenic
TGTTTCTGGATAGATTCTTC+TGG 0.333212 8_2:-21704338 None:intergenic
TTTGTTGTGCAGACTCCAAC+AGG 0.336703 8_2:+21706251 Msa1239770:intron
CTCTCGTTTGATTCATCGTT+GGG 0.361577 8_2:+21704361 Msa1239770:five_prime_UTR
ATGCATTCTAATCCACTTGC+TGG 0.376927 8_2:+21706320 Msa1239770:CDS
AATGGACTATACACCGTGTT+TGG 0.381087 8_2:+21705479 Msa1239770:CDS
GCAAAACAACCACATTTGAA+TGG 0.399385 8_2:+21705461 Msa1239770:CDS
CTTAGAATCATCAAGTTCAA+TGG 0.409325 8_2:+21704397 Msa1239770:exon
GTGTTTGGAAGAGTAATTCA+TGG 0.424305 8_2:+21705494 Msa1239770:CDS
TGTGCAAGTGGTTACTTTGA+TGG 0.436733 8_2:+21704748 Msa1239770:CDS
GTGCAAGTGGTTACTTTGAT+GGG 0.447542 8_2:+21704749 Msa1239770:CDS
AATCCACTTGCTGGATAGAC+TGG 0.447553 8_2:+21706329 Msa1239770:exon
GATCCAACTGGTACCGGCAA+AGG 0.454778 8_2:+21704817 Msa1239770:CDS
ATCCAACTGGTACCGGCAAA+GGG 0.456047 8_2:+21704818 Msa1239770:CDS
TGCCACTATTTATTCAGCTC+GGG 0.468670 8_2:-21704277 None:intergenic
CGAGATAAGAGAATCTTTGA+AGG 0.470779 8_2:+21704873 Msa1239770:CDS
AACAGTGGTCCAAATACTAA+TGG 0.476528 8_2:+21705416 Msa1239770:CDS
GAAGGAGAATTCTTACATGC+TGG 0.495478 8_2:+21706423 Msa1239770:three_prime_UTR
ACAAAATAAGTATTCAATGC+TGG 0.502197 8_2:-21706555 None:intergenic
ATCCCGAGCTGAATAAATAG+TGG 0.508733 8_2:+21704275 Msa1239770:five_prime_UTR
CTGCCACTATTTATTCAGCT+CGG 0.512024 8_2:-21704278 None:intergenic
GGTGGAGATCCAACTGGTAC+CGG 0.512107 8_2:+21704811 Msa1239770:CDS
ATAGATTCTTCTGGAGAAAG+AGG 0.513253 8_2:-21704329 None:intergenic
ATCGACCGCTTGCAGAGATA+AGG 0.523160 8_2:+21706282 Msa1239770:CDS
TCATAAAACCTTTAATATTG+CGG 0.529387 8_2:-21704783 None:intergenic
ACTCTCGTTTGATTCATCGT+TGG 0.529769 8_2:+21704360 Msa1239770:five_prime_UTR
GTGCAGACTCCAACAGGGGC+AGG 0.534782 8_2:+21706257 Msa1239770:intron
TGCAAGGGGAATATTGTCAA+TGG 0.546666 8_2:+21705391 Msa1239770:CDS
ATTCAAGGTGGAGATCCAAC+TGG 0.551039 8_2:+21704805 Msa1239770:CDS
GGTCGATCACCTGCCCCTGT+TGG 0.556160 8_2:-21706266 None:intergenic
CCAACTGGTACCGGCAAAGG+GGG 0.557700 8_2:+21704820 Msa1239770:CDS
TCCAACTGGTACCGGCAAAG+GGG 0.565649 8_2:+21704819 Msa1239770:CDS
TGTTGTGCAGACTCCAACAG+GGG 0.570681 8_2:+21706253 Msa1239770:intron
GTGTGTTCCAGCATAATGCA+AGG 0.572411 8_2:+21705375 Msa1239770:intron
AGACCAGTCTATCCAGCAAG+TGG 0.583446 8_2:-21706332 None:intergenic
TGTGTTCCAGCATAATGCAA+GGG 0.592664 8_2:+21705376 Msa1239770:intron
TAACTTCTAAGTAGAGGTGA+AGG 0.593566 8_2:+21706405 Msa1239770:three_prime_UTR
TAGATTCTTCTGGAGAAAGA+GGG 0.601436 8_2:-21704328 None:intergenic
GTTACTCTGCACACAAACCT+AGG 0.607813 8_2:+21704510 Msa1239770:CDS
TAGATCTAACTTCTAAGTAG+AGG 0.609087 8_2:+21706399 Msa1239770:three_prime_UTR
ATGAATTACTCTTCCAAACA+CGG 0.615509 8_2:-21705492 None:intergenic
AATAGTGGCAGTGCGTGTAG+TGG 0.616075 8_2:+21704290 Msa1239770:five_prime_UTR
TTTGAGACAAAACTGTGTGA+TGG 0.628905 8_2:+21706521 Msa1239770:three_prime_UTR
TTTCGCATTTGATATCACCT+AGG 0.629054 8_2:-21704527 None:intergenic
GTGTATAGTCCATTCAAATG+TGG 0.635991 8_2:-21705470 None:intergenic
TTGTTGTGCAGACTCCAACA+GGG 0.638282 8_2:+21706252 Msa1239770:intron
CAACTGGTACCGGCAAAGGG+GGG 0.655196 8_2:+21704821 Msa1239770:CDS
TTGAGCCTTATCTCTGCAAG+CGG 0.665431 8_2:-21706287 None:intergenic
GTGTTCCAGCATAATGCAAG+GGG 0.668599 8_2:+21705377 Msa1239770:intron
TTATGAAGTACGTACCTCGG+AGG 0.716745 8_2:-21704574 None:intergenic
ATATTGTCAATGGCTAACAG+TGG 0.731092 8_2:+21705401 Msa1239770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTGTTTATCAAAAAATT+AGG + chr8_2:21705566-21705585 Msa1239770:intron 10.0%
!! ATTTGTTTATCAAAAAATTA+GGG + chr8_2:21705567-21705586 Msa1239770:intron 10.0%
!! TTATAAAAATATTCATTCAA+TGG - chr8_2:21705863-21705882 None:intergenic 10.0%
!!! AATTTGTTTATCAAAAAATT+AGG + chr8_2:21705566-21705585 Msa1239770:intron 10.0%
!! ATTTGTTTATCAAAAAATTA+GGG + chr8_2:21705567-21705586 Msa1239770:intron 10.0%
!! TTATAAAAATATTCATTCAA+TGG - chr8_2:21705863-21705882 None:intergenic 10.0%
!!! TTTTATAAAACAAACGAAAT+AGG + chr8_2:21705026-21705045 Msa1239770:intron 15.0%
!!! AAAATTCATTTTGAATGAAA+AGG - chr8_2:21705241-21705260 None:intergenic 15.0%
!!! CAATCTTTTAAAAATTGAAT+CGG - chr8_2:21705742-21705761 None:intergenic 15.0%
!!! TTCATACTTTTTTTTTTTTG+TGG - chr8_2:21705919-21705938 None:intergenic 15.0%
!!! CAAAAAAAAAAAAGTATGAA+TGG + chr8_2:21705919-21705938 Msa1239770:intron 15.0%
!! AAATAGAATGTAATCATAAT+AGG - chr8_2:21706043-21706062 None:intergenic 15.0%
!!! TTTTATAAAACAAACGAAAT+AGG + chr8_2:21705026-21705045 Msa1239770:intron 15.0%
!!! AAAATTCATTTTGAATGAAA+AGG - chr8_2:21705241-21705260 None:intergenic 15.0%
!!! CAATCTTTTAAAAATTGAAT+CGG - chr8_2:21705742-21705761 None:intergenic 15.0%
!!! TTCATACTTTTTTTTTTTTG+TGG - chr8_2:21705919-21705938 None:intergenic 15.0%
!!! CAAAAAAAAAAAAGTATGAA+TGG + chr8_2:21705919-21705938 Msa1239770:intron 15.0%
!! AAATAGAATGTAATCATAAT+AGG - chr8_2:21706043-21706062 None:intergenic 15.0%
!! ATAACCAATTGTTATCTTAA+CGG + chr8_2:21704593-21704612 Msa1239770:intron 20.0%
!!! AAAGAATTACATGATTTTAC+CGG - chr8_2:21704628-21704647 None:intergenic 20.0%
!! TCATAAAACCTTTAATATTG+CGG - chr8_2:21704786-21704805 None:intergenic 20.0%
!!! ATTAAAGGTTTTATGATTCA+AGG + chr8_2:21704790-21704809 Msa1239770:CDS 20.0%
!! ACTATCAGAAATATGAAATT+TGG + chr8_2:21705140-21705159 Msa1239770:intron 20.0%
!!! TTTTGTTACCGATAATATAT+AGG + chr8_2:21706150-21706169 Msa1239770:intron 20.0%
!! CATTTAAGCCTATATATTAT+CGG - chr8_2:21706161-21706180 None:intergenic 20.0%
!! ATAACCAATTGTTATCTTAA+CGG + chr8_2:21704593-21704612 Msa1239770:intron 20.0%
!!! AAAGAATTACATGATTTTAC+CGG - chr8_2:21704628-21704647 None:intergenic 20.0%
!! TCATAAAACCTTTAATATTG+CGG - chr8_2:21704786-21704805 None:intergenic 20.0%
!!! ATTAAAGGTTTTATGATTCA+AGG + chr8_2:21704790-21704809 Msa1239770:CDS 20.0%
!! ACTATCAGAAATATGAAATT+TGG + chr8_2:21705140-21705159 Msa1239770:intron 20.0%
!!! TTTTGTTACCGATAATATAT+AGG + chr8_2:21706150-21706169 Msa1239770:intron 20.0%
!! CATTTAAGCCTATATATTAT+CGG - chr8_2:21706161-21706180 None:intergenic 20.0%
! TAACCAATTGTTATCTTAAC+GGG + chr8_2:21704594-21704613 Msa1239770:intron 25.0%
! ATATTTCACCGCAATATTAA+AGG + chr8_2:21704775-21704794 Msa1239770:CDS 25.0%
!!! CTGTTCAGTTTTTAAAACAT+TGG - chr8_2:21705599-21705618 None:intergenic 25.0%
! AAATAACCAAACTGAAGTAA+AGG - chr8_2:21705636-21705655 None:intergenic 25.0%
! TTTAAAAATTGAATCGGACA+TGG - chr8_2:21705736-21705755 None:intergenic 25.0%
!! AAAAGATTGATTGATGATCA+AGG + chr8_2:21705753-21705772 Msa1239770:intron 25.0%
! AATAGTTGAATGTGATCATT+AGG + chr8_2:21705817-21705836 Msa1239770:intron 25.0%
! AAGTATGAATGGAGAAAAAT+TGG + chr8_2:21705930-21705949 Msa1239770:intron 25.0%
! AGTATGAATGGAGAAAAATT+GGG + chr8_2:21705931-21705950 Msa1239770:intron 25.0%
! GATCTATTATTTCGATAGTT+GGG - chr8_2:21706021-21706040 None:intergenic 25.0%
!! GAAGTTAGATCTATTGTTTT+GGG - chr8_2:21706392-21706411 None:intergenic 25.0%
!! AGAAGTTAGATCTATTGTTT+TGG - chr8_2:21706393-21706412 None:intergenic 25.0%
! ACAAAATAAGTATTCAATGC+TGG - chr8_2:21706558-21706577 None:intergenic 25.0%
! TAACCAATTGTTATCTTAAC+GGG + chr8_2:21704594-21704613 Msa1239770:intron 25.0%
! ATATTTCACCGCAATATTAA+AGG + chr8_2:21704775-21704794 Msa1239770:CDS 25.0%
!!! CTGTTCAGTTTTTAAAACAT+TGG - chr8_2:21705599-21705618 None:intergenic 25.0%
! AAATAACCAAACTGAAGTAA+AGG - chr8_2:21705636-21705655 None:intergenic 25.0%
! TTTAAAAATTGAATCGGACA+TGG - chr8_2:21705736-21705755 None:intergenic 25.0%
!! AAAAGATTGATTGATGATCA+AGG + chr8_2:21705753-21705772 Msa1239770:intron 25.0%
! AATAGTTGAATGTGATCATT+AGG + chr8_2:21705817-21705836 Msa1239770:intron 25.0%
! AAGTATGAATGGAGAAAAAT+TGG + chr8_2:21705930-21705949 Msa1239770:intron 25.0%
! AGTATGAATGGAGAAAAATT+GGG + chr8_2:21705931-21705950 Msa1239770:intron 25.0%
! GATCTATTATTTCGATAGTT+GGG - chr8_2:21706021-21706040 None:intergenic 25.0%
!! GAAGTTAGATCTATTGTTTT+GGG - chr8_2:21706392-21706411 None:intergenic 25.0%
!! AGAAGTTAGATCTATTGTTT+TGG - chr8_2:21706393-21706412 None:intergenic 25.0%
! ACAAAATAAGTATTCAATGC+TGG - chr8_2:21706558-21706577 None:intergenic 25.0%
CTTAGAATCATCAAGTTCAA+TGG + chr8_2:21704397-21704416 Msa1239770:exon 30.0%
!! AATTGTTATCTTAACGGGTT+CGG + chr8_2:21704599-21704618 Msa1239770:intron 30.0%
CCAATTGAAACAACAGAATA+GGG - chr8_2:21704651-21704670 None:intergenic 30.0%
ACCAATTGAAACAACAGAAT+AGG - chr8_2:21704652-21704671 None:intergenic 30.0%
!! AAAGGTTTTATGATTCAAGG+TGG + chr8_2:21704793-21704812 Msa1239770:CDS 30.0%
TTAACAAATACTACACACAC+AGG - chr8_2:21704955-21704974 None:intergenic 30.0%
TAGAATTGACCAAGTATATG+CGG + chr8_2:21705052-21705071 Msa1239770:intron 30.0%
AAAGTATAACAGATTGCCTA+AGG - chr8_2:21705108-21705127 None:intergenic 30.0%
! TATTTTCTCCATAATGCACA+AGG - chr8_2:21705304-21705323 None:intergenic 30.0%
! TTTTCTTCATCAGATTTTCG+TGG + chr8_2:21705331-21705350 Msa1239770:intron 30.0%
! AACTGACTTCCATTAGTATT+TGG - chr8_2:21705428-21705447 None:intergenic 30.0%
ATGAATTACTCTTCCAAACA+CGG - chr8_2:21705495-21705514 None:intergenic 30.0%
! ATTTGAAGTTCTTGATCTCA+TGG + chr8_2:21705517-21705536 Msa1239770:intron 30.0%
!!! CTTCAGTTTGGTTATTTTTG+TGG + chr8_2:21705639-21705658 Msa1239770:intron 30.0%
GTAGTTAAAACATGACTCAA+AGG + chr8_2:21705699-21705718 Msa1239770:intron 30.0%
TTGAATGTGATCATTAGGAA+TGG + chr8_2:21705822-21705841 Msa1239770:intron 30.0%
CGAAAACTAATGAATCGTAA+TGG - chr8_2:21705991-21706010 None:intergenic 30.0%
GGATCTATTATTTCGATAGT+TGG - chr8_2:21706022-21706041 None:intergenic 30.0%
ATGTTTAGTATTTGAGTGCA+TGG - chr8_2:21706204-21706223 None:intergenic 30.0%
TAGATCTAACTTCTAAGTAG+AGG + chr8_2:21706399-21706418 Msa1239770:three_prime_UTR 30.0%
!!! TTGTCTTTGTTCTTGTTTTG+TGG + chr8_2:21706574-21706593 Msa1239770:three_prime_UTR 30.0%
! TTTGTGGTTCACCATTTTAA+TGG + chr8_2:21706590-21706609 Msa1239770:three_prime_UTR 30.0%
TGACAAACCATCCATTAAAA+TGG - chr8_2:21706604-21706623 None:intergenic 30.0%
CTTAGAATCATCAAGTTCAA+TGG + chr8_2:21704397-21704416 Msa1239770:exon 30.0%
!! AATTGTTATCTTAACGGGTT+CGG + chr8_2:21704599-21704618 Msa1239770:intron 30.0%
CCAATTGAAACAACAGAATA+GGG - chr8_2:21704651-21704670 None:intergenic 30.0%
ACCAATTGAAACAACAGAAT+AGG - chr8_2:21704652-21704671 None:intergenic 30.0%
!! AAAGGTTTTATGATTCAAGG+TGG + chr8_2:21704793-21704812 Msa1239770:CDS 30.0%
TTAACAAATACTACACACAC+AGG - chr8_2:21704955-21704974 None:intergenic 30.0%
TAGAATTGACCAAGTATATG+CGG + chr8_2:21705052-21705071 Msa1239770:intron 30.0%
AAAGTATAACAGATTGCCTA+AGG - chr8_2:21705108-21705127 None:intergenic 30.0%
! TATTTTCTCCATAATGCACA+AGG - chr8_2:21705304-21705323 None:intergenic 30.0%
! TTTTCTTCATCAGATTTTCG+TGG + chr8_2:21705331-21705350 Msa1239770:intron 30.0%
! AACTGACTTCCATTAGTATT+TGG - chr8_2:21705428-21705447 None:intergenic 30.0%
ATGAATTACTCTTCCAAACA+CGG - chr8_2:21705495-21705514 None:intergenic 30.0%
! ATTTGAAGTTCTTGATCTCA+TGG + chr8_2:21705517-21705536 Msa1239770:intron 30.0%
!!! CTTCAGTTTGGTTATTTTTG+TGG + chr8_2:21705639-21705658 Msa1239770:intron 30.0%
GTAGTTAAAACATGACTCAA+AGG + chr8_2:21705699-21705718 Msa1239770:intron 30.0%
TTGAATGTGATCATTAGGAA+TGG + chr8_2:21705822-21705841 Msa1239770:intron 30.0%
CGAAAACTAATGAATCGTAA+TGG - chr8_2:21705991-21706010 None:intergenic 30.0%
GGATCTATTATTTCGATAGT+TGG - chr8_2:21706022-21706041 None:intergenic 30.0%
ATGTTTAGTATTTGAGTGCA+TGG - chr8_2:21706204-21706223 None:intergenic 30.0%
TAGATCTAACTTCTAAGTAG+AGG + chr8_2:21706399-21706418 Msa1239770:three_prime_UTR 30.0%
!!! TTGTCTTTGTTCTTGTTTTG+TGG + chr8_2:21706574-21706593 Msa1239770:three_prime_UTR 30.0%
! TTTGTGGTTCACCATTTTAA+TGG + chr8_2:21706590-21706609 Msa1239770:three_prime_UTR 30.0%
TGACAAACCATCCATTAAAA+TGG - chr8_2:21706604-21706623 None:intergenic 30.0%
! TAGATTCTTCTGGAGAAAGA+GGG - chr8_2:21704331-21704350 None:intergenic 35.0%
! ATAGATTCTTCTGGAGAAAG+AGG - chr8_2:21704332-21704351 None:intergenic 35.0%
!! TGTTTCTGGATAGATTCTTC+TGG - chr8_2:21704341-21704360 None:intergenic 35.0%
TCATCAAGTTCAATGGTAAG+TGG + chr8_2:21704404-21704423 Msa1239770:intron 35.0%
TTCTATCGTTGTTCATCAGT+CGG + chr8_2:21704488-21704507 Msa1239770:intron 35.0%
TTTCGCATTTGATATCACCT+AGG - chr8_2:21704530-21704549 None:intergenic 35.0%
GAACCCGTTAAGATAACAAT+TGG - chr8_2:21704600-21704619 None:intergenic 35.0%
!! ATTGTTATCTTAACGGGTTC+GGG + chr8_2:21704600-21704619 Msa1239770:intron 35.0%
!! CCCTATTCTGTTGTTTCAAT+TGG + chr8_2:21704648-21704667 Msa1239770:intron 35.0%
CGAGATAAGAGAATCTTTGA+AGG + chr8_2:21704873-21704892 Msa1239770:CDS 35.0%
! TTACCATGACACCATGTTTT+TGG + chr8_2:21704917-21704936 Msa1239770:intron 35.0%
! TACCATGACACCATGTTTTT+GGG + chr8_2:21704918-21704937 Msa1239770:intron 35.0%
TTTGTTAAGCATGTTAGAGC+AGG + chr8_2:21704967-21704986 Msa1239770:intron 35.0%
TTGTTAAGCATGTTAGAGCA+GGG + chr8_2:21704968-21704987 Msa1239770:intron 35.0%
ATGGATGAAAATGCTACCTT+AGG + chr8_2:21705089-21705108 Msa1239770:intron 35.0%
! GAGTTTTTCCTTGTGCATTA+TGG + chr8_2:21705293-21705312 Msa1239770:intron 35.0%
! AGATTTTCGTGGTAGCTAAT+TGG + chr8_2:21705342-21705361 Msa1239770:intron 35.0%
ATATTGTCAATGGCTAACAG+TGG + chr8_2:21705401-21705420 Msa1239770:CDS 35.0%
AACAGTGGTCCAAATACTAA+TGG + chr8_2:21705416-21705435 Msa1239770:CDS 35.0%
GCAAAACAACCACATTTGAA+TGG + chr8_2:21705461-21705480 Msa1239770:CDS 35.0%
GTGTATAGTCCATTCAAATG+TGG - chr8_2:21705473-21705492 None:intergenic 35.0%
GTGTTTGGAAGAGTAATTCA+TGG + chr8_2:21705494-21705513 Msa1239770:CDS 35.0%
AGTTCTTGATCTCATGGAAA+AGG + chr8_2:21705523-21705542 Msa1239770:intron 35.0%
TCAAGGTTAACCAGAATTGT+AGG + chr8_2:21705770-21705789 Msa1239770:intron 35.0%
ATGTGATCATTAGGAATGGA+AGG + chr8_2:21705826-21705845 Msa1239770:intron 35.0%
TGTGATCATTAGGAATGGAA+GGG + chr8_2:21705827-21705846 Msa1239770:intron 35.0%
! TTCACTTGTTCAGTATTGGA+TGG + chr8_2:21705957-21705976 Msa1239770:intron 35.0%
! CTGATTTGACAACACAATGA+AGG + chr8_2:21706092-21706111 Msa1239770:intron 35.0%
TAACTTCTAAGTAGAGGTGA+AGG + chr8_2:21706405-21706424 Msa1239770:three_prime_UTR 35.0%
! TTTGAGACAAAACTGTGTGA+TGG + chr8_2:21706521-21706540 Msa1239770:three_prime_UTR 35.0%
!! TGGTTCACCATTTTAATGGA+TGG + chr8_2:21706594-21706613 Msa1239770:three_prime_UTR 35.0%
! TATTCAGCTCGGGATTTTAA+AGG - chr8_2:21704270-21704289 None:intergenic 35.0%
! TAGATTCTTCTGGAGAAAGA+GGG - chr8_2:21704331-21704350 None:intergenic 35.0%
! ATAGATTCTTCTGGAGAAAG+AGG - chr8_2:21704332-21704351 None:intergenic 35.0%
!! TGTTTCTGGATAGATTCTTC+TGG - chr8_2:21704341-21704360 None:intergenic 35.0%
TCATCAAGTTCAATGGTAAG+TGG + chr8_2:21704404-21704423 Msa1239770:intron 35.0%
TTCTATCGTTGTTCATCAGT+CGG + chr8_2:21704488-21704507 Msa1239770:intron 35.0%
TTTCGCATTTGATATCACCT+AGG - chr8_2:21704530-21704549 None:intergenic 35.0%
GAACCCGTTAAGATAACAAT+TGG - chr8_2:21704600-21704619 None:intergenic 35.0%
!! ATTGTTATCTTAACGGGTTC+GGG + chr8_2:21704600-21704619 Msa1239770:intron 35.0%
!! CCCTATTCTGTTGTTTCAAT+TGG + chr8_2:21704648-21704667 Msa1239770:intron 35.0%
CGAGATAAGAGAATCTTTGA+AGG + chr8_2:21704873-21704892 Msa1239770:CDS 35.0%
! TTACCATGACACCATGTTTT+TGG + chr8_2:21704917-21704936 Msa1239770:intron 35.0%
! TACCATGACACCATGTTTTT+GGG + chr8_2:21704918-21704937 Msa1239770:intron 35.0%
TTTGTTAAGCATGTTAGAGC+AGG + chr8_2:21704967-21704986 Msa1239770:intron 35.0%
TTGTTAAGCATGTTAGAGCA+GGG + chr8_2:21704968-21704987 Msa1239770:intron 35.0%
ATGGATGAAAATGCTACCTT+AGG + chr8_2:21705089-21705108 Msa1239770:intron 35.0%
! GAGTTTTTCCTTGTGCATTA+TGG + chr8_2:21705293-21705312 Msa1239770:intron 35.0%
! AGATTTTCGTGGTAGCTAAT+TGG + chr8_2:21705342-21705361 Msa1239770:intron 35.0%
ATATTGTCAATGGCTAACAG+TGG + chr8_2:21705401-21705420 Msa1239770:CDS 35.0%
AACAGTGGTCCAAATACTAA+TGG + chr8_2:21705416-21705435 Msa1239770:CDS 35.0%
GCAAAACAACCACATTTGAA+TGG + chr8_2:21705461-21705480 Msa1239770:CDS 35.0%
GTGTATAGTCCATTCAAATG+TGG - chr8_2:21705473-21705492 None:intergenic 35.0%
GTGTTTGGAAGAGTAATTCA+TGG + chr8_2:21705494-21705513 Msa1239770:CDS 35.0%
AGTTCTTGATCTCATGGAAA+AGG + chr8_2:21705523-21705542 Msa1239770:intron 35.0%
TCAAGGTTAACCAGAATTGT+AGG + chr8_2:21705770-21705789 Msa1239770:intron 35.0%
ATGTGATCATTAGGAATGGA+AGG + chr8_2:21705826-21705845 Msa1239770:intron 35.0%
TGTGATCATTAGGAATGGAA+GGG + chr8_2:21705827-21705846 Msa1239770:intron 35.0%
! TTCACTTGTTCAGTATTGGA+TGG + chr8_2:21705957-21705976 Msa1239770:intron 35.0%
! CTGATTTGACAACACAATGA+AGG + chr8_2:21706092-21706111 Msa1239770:intron 35.0%
TAACTTCTAAGTAGAGGTGA+AGG + chr8_2:21706405-21706424 Msa1239770:three_prime_UTR 35.0%
! TTTGAGACAAAACTGTGTGA+TGG + chr8_2:21706521-21706540 Msa1239770:three_prime_UTR 35.0%
!! TGGTTCACCATTTTAATGGA+TGG + chr8_2:21706594-21706613 Msa1239770:three_prime_UTR 35.0%
ATCCCGAGCTGAATAAATAG+TGG + chr8_2:21704275-21704294 Msa1239770:five_prime_UTR 40.0%
TGCCACTATTTATTCAGCTC+GGG - chr8_2:21704280-21704299 None:intergenic 40.0%
CTGCCACTATTTATTCAGCT+CGG - chr8_2:21704281-21704300 None:intergenic 40.0%
!! GAATCAAACGAGAGTGTTTC+TGG - chr8_2:21704355-21704374 None:intergenic 40.0%
ACTCTCGTTTGATTCATCGT+TGG + chr8_2:21704360-21704379 Msa1239770:five_prime_UTR 40.0%
CTCTCGTTTGATTCATCGTT+GGG + chr8_2:21704361-21704380 Msa1239770:five_prime_UTR 40.0%
! GATTCATCGTTGGGATTTTG+CGG + chr8_2:21704370-21704389 Msa1239770:five_prime_UTR 40.0%
TGGTTATGAAGTACGTACCT+CGG - chr8_2:21704580-21704599 None:intergenic 40.0%
!! TTTTTAGCGCTTTGTGCAAG+TGG + chr8_2:21704736-21704755 Msa1239770:CDS 40.0%
! TGTGCAAGTGGTTACTTTGA+TGG + chr8_2:21704748-21704767 Msa1239770:CDS 40.0%
! GTGCAAGTGGTTACTTTGAT+GGG + chr8_2:21704749-21704768 Msa1239770:CDS 40.0%
TGTCATGGTAATTAGCACGA+CGG - chr8_2:21704908-21704927 None:intergenic 40.0%
!! ACCATGACACCATGTTTTTG+GGG + chr8_2:21704919-21704938 Msa1239770:intron 40.0%
ACAGCATAACCCCAAAAACA+TGG - chr8_2:21704931-21704950 None:intergenic 40.0%
TGTTAAGCATGTTAGAGCAG+GGG + chr8_2:21704969-21704988 Msa1239770:intron 40.0%
TCAGTAGAACCGCATATACT+TGG - chr8_2:21705064-21705083 None:intergenic 40.0%
TGCGGTTCTACTGAAATTGA+TGG + chr8_2:21705070-21705089 Msa1239770:intron 40.0%
TGTGTTCCAGCATAATGCAA+GGG + chr8_2:21705376-21705395 Msa1239770:intron 40.0%
ATATTCCCCTTGCATTATGC+TGG - chr8_2:21705385-21705404 None:intergenic 40.0%
TGCAAGGGGAATATTGTCAA+TGG + chr8_2:21705391-21705410 Msa1239770:CDS 40.0%
!! AATGGACTATACACCGTGTT+TGG + chr8_2:21705479-21705498 Msa1239770:CDS 40.0%
ACTGAACAGAAACCTTGAAC+TGG + chr8_2:21705610-21705629 Msa1239770:intron 40.0%
!! AACTGGCCTTTACTTCAGTT+TGG + chr8_2:21705627-21705646 Msa1239770:intron 40.0%
AATTGAATCGGACATGGAAC+AGG - chr8_2:21705730-21705749 None:intergenic 40.0%
CCAAACATAGCCTACAATTC+TGG - chr8_2:21705783-21705802 None:intergenic 40.0%
CCAGAATTGTAGGCTATGTT+TGG + chr8_2:21705780-21705799 Msa1239770:intron 40.0%
GCTGTTCACTTGTTCAGTAT+TGG + chr8_2:21705953-21705972 Msa1239770:intron 40.0%
CATCAATCCAAACATAGCCT+AGG + chr8_2:21706063-21706082 Msa1239770:intron 40.0%
TGTCAAATCAGTCAAGTCCT+AGG - chr8_2:21706083-21706102 None:intergenic 40.0%
TGGTGTGTGAATTCTAGATG+AGG - chr8_2:21706184-21706203 None:intergenic 40.0%
ATGCATTCTAATCCACTTGC+TGG + chr8_2:21706320-21706339 Msa1239770:CDS 40.0%
GAAGGAGAATTCTTACATGC+TGG + chr8_2:21706423-21706442 Msa1239770:three_prime_UTR 40.0%
ATCCCGAGCTGAATAAATAG+TGG + chr8_2:21704275-21704294 Msa1239770:five_prime_UTR 40.0%
TGCCACTATTTATTCAGCTC+GGG - chr8_2:21704280-21704299 None:intergenic 40.0%
CTGCCACTATTTATTCAGCT+CGG - chr8_2:21704281-21704300 None:intergenic 40.0%
!! GAATCAAACGAGAGTGTTTC+TGG - chr8_2:21704355-21704374 None:intergenic 40.0%
ACTCTCGTTTGATTCATCGT+TGG + chr8_2:21704360-21704379 Msa1239770:five_prime_UTR 40.0%
CTCTCGTTTGATTCATCGTT+GGG + chr8_2:21704361-21704380 Msa1239770:five_prime_UTR 40.0%
! GATTCATCGTTGGGATTTTG+CGG + chr8_2:21704370-21704389 Msa1239770:five_prime_UTR 40.0%
TGGTTATGAAGTACGTACCT+CGG - chr8_2:21704580-21704599 None:intergenic 40.0%
!! TTTTTAGCGCTTTGTGCAAG+TGG + chr8_2:21704736-21704755 Msa1239770:CDS 40.0%
! TGTGCAAGTGGTTACTTTGA+TGG + chr8_2:21704748-21704767 Msa1239770:CDS 40.0%
! GTGCAAGTGGTTACTTTGAT+GGG + chr8_2:21704749-21704768 Msa1239770:CDS 40.0%
TGTCATGGTAATTAGCACGA+CGG - chr8_2:21704908-21704927 None:intergenic 40.0%
!! ACCATGACACCATGTTTTTG+GGG + chr8_2:21704919-21704938 Msa1239770:intron 40.0%
ACAGCATAACCCCAAAAACA+TGG - chr8_2:21704931-21704950 None:intergenic 40.0%
TGTTAAGCATGTTAGAGCAG+GGG + chr8_2:21704969-21704988 Msa1239770:intron 40.0%
TCAGTAGAACCGCATATACT+TGG - chr8_2:21705064-21705083 None:intergenic 40.0%
TGCGGTTCTACTGAAATTGA+TGG + chr8_2:21705070-21705089 Msa1239770:intron 40.0%
TGTGTTCCAGCATAATGCAA+GGG + chr8_2:21705376-21705395 Msa1239770:intron 40.0%
ATATTCCCCTTGCATTATGC+TGG - chr8_2:21705385-21705404 None:intergenic 40.0%
TGCAAGGGGAATATTGTCAA+TGG + chr8_2:21705391-21705410 Msa1239770:CDS 40.0%
!! AATGGACTATACACCGTGTT+TGG + chr8_2:21705479-21705498 Msa1239770:CDS 40.0%
ACTGAACAGAAACCTTGAAC+TGG + chr8_2:21705610-21705629 Msa1239770:intron 40.0%
!! AACTGGCCTTTACTTCAGTT+TGG + chr8_2:21705627-21705646 Msa1239770:intron 40.0%
AATTGAATCGGACATGGAAC+AGG - chr8_2:21705730-21705749 None:intergenic 40.0%
CCAAACATAGCCTACAATTC+TGG - chr8_2:21705783-21705802 None:intergenic 40.0%
CCAGAATTGTAGGCTATGTT+TGG + chr8_2:21705780-21705799 Msa1239770:intron 40.0%
GCTGTTCACTTGTTCAGTAT+TGG + chr8_2:21705953-21705972 Msa1239770:intron 40.0%
CATCAATCCAAACATAGCCT+AGG + chr8_2:21706063-21706082 Msa1239770:intron 40.0%
TGTCAAATCAGTCAAGTCCT+AGG - chr8_2:21706083-21706102 None:intergenic 40.0%
TGGTGTGTGAATTCTAGATG+AGG - chr8_2:21706184-21706203 None:intergenic 40.0%
ATGCATTCTAATCCACTTGC+TGG + chr8_2:21706320-21706339 Msa1239770:CDS 40.0%
GAAGGAGAATTCTTACATGC+TGG + chr8_2:21706423-21706442 Msa1239770:three_prime_UTR 40.0%
GAGAAGAGACATGAAGAGTG+TGG - chr8_2:21704430-21704449 None:intergenic 45.0%
GTTACTCTGCACACAAACCT+AGG + chr8_2:21704510-21704529 Msa1239770:CDS 45.0%
! TACGTACCTCGGAGGTTTTA+GGG - chr8_2:21704569-21704588 None:intergenic 45.0%
TTATGAAGTACGTACCTCGG+AGG - chr8_2:21704577-21704596 None:intergenic 45.0%
ATTCAAGGTGGAGATCCAAC+TGG + chr8_2:21704805-21704824 Msa1239770:CDS 45.0%
! CAAAGGGGGGACTAGTATTT+GGG + chr8_2:21704834-21704853 Msa1239770:CDS 45.0%
! AAAGGGGGGACTAGTATTTG+GGG + chr8_2:21704835-21704854 Msa1239770:CDS 45.0%
! ACCCCAAAAACATGGTGTCA+TGG - chr8_2:21704923-21704942 None:intergenic 45.0%
GTGTGTTCCAGCATAATGCA+AGG + chr8_2:21705375-21705394 Msa1239770:intron 45.0%
GTGTTCCAGCATAATGCAAG+GGG + chr8_2:21705377-21705396 Msa1239770:intron 45.0%
CTGAAGTAAAGGCCAGTTCA+AGG - chr8_2:21705625-21705644 None:intergenic 45.0%
GTCAAGTCCTAGGCTATGTT+TGG - chr8_2:21706073-21706092 None:intergenic 45.0%
! TTTGTTGTGCAGACTCCAAC+AGG + chr8_2:21706251-21706270 Msa1239770:intron 45.0%
TTGTTGTGCAGACTCCAACA+GGG + chr8_2:21706252-21706271 Msa1239770:intron 45.0%
! TTGAGCCTTATCTCTGCAAG+CGG - chr8_2:21706290-21706309 None:intergenic 45.0%
! AATCCACTTGCTGGATAGAC+TGG + chr8_2:21706329-21706348 Msa1239770:exon 45.0%
GAGAAGAGACATGAAGAGTG+TGG - chr8_2:21704430-21704449 None:intergenic 45.0%
GTTACTCTGCACACAAACCT+AGG + chr8_2:21704510-21704529 Msa1239770:CDS 45.0%
! TACGTACCTCGGAGGTTTTA+GGG - chr8_2:21704569-21704588 None:intergenic 45.0%
TTATGAAGTACGTACCTCGG+AGG - chr8_2:21704577-21704596 None:intergenic 45.0%
ATTCAAGGTGGAGATCCAAC+TGG + chr8_2:21704805-21704824 Msa1239770:CDS 45.0%
! CAAAGGGGGGACTAGTATTT+GGG + chr8_2:21704834-21704853 Msa1239770:CDS 45.0%
! AAAGGGGGGACTAGTATTTG+GGG + chr8_2:21704835-21704854 Msa1239770:CDS 45.0%
! ACCCCAAAAACATGGTGTCA+TGG - chr8_2:21704923-21704942 None:intergenic 45.0%
GTGTGTTCCAGCATAATGCA+AGG + chr8_2:21705375-21705394 Msa1239770:intron 45.0%
GTGTTCCAGCATAATGCAAG+GGG + chr8_2:21705377-21705396 Msa1239770:intron 45.0%
CTGAAGTAAAGGCCAGTTCA+AGG - chr8_2:21705625-21705644 None:intergenic 45.0%
GTCAAGTCCTAGGCTATGTT+TGG - chr8_2:21706073-21706092 None:intergenic 45.0%
! TTTGTTGTGCAGACTCCAAC+AGG + chr8_2:21706251-21706270 Msa1239770:intron 45.0%
TTGTTGTGCAGACTCCAACA+GGG + chr8_2:21706252-21706271 Msa1239770:intron 45.0%
! TTGAGCCTTATCTCTGCAAG+CGG - chr8_2:21706290-21706309 None:intergenic 45.0%
! AATCCACTTGCTGGATAGAC+TGG + chr8_2:21706329-21706348 Msa1239770:exon 45.0%
AATAGTGGCAGTGCGTGTAG+TGG + chr8_2:21704290-21704309 Msa1239770:five_prime_UTR 50.0%
! GTACGTACCTCGGAGGTTTT+AGG - chr8_2:21704570-21704589 None:intergenic 50.0%
!! ATCTTAACGGGTTCGGGTTC+CGG + chr8_2:21704606-21704625 Msa1239770:intron 50.0%
!! ATCCAACTGGTACCGGCAAA+GGG + chr8_2:21704818-21704837 Msa1239770:CDS 50.0%
AATACTAGTCCCCCCTTTGC+CGG - chr8_2:21704833-21704852 None:intergenic 50.0%
! GCAAAGGGGGGACTAGTATT+TGG + chr8_2:21704833-21704852 Msa1239770:CDS 50.0%
TGTTGTGCAGACTCCAACAG+GGG + chr8_2:21706253-21706272 Msa1239770:intron 50.0%
ATCGACCGCTTGCAGAGATA+AGG + chr8_2:21706282-21706301 Msa1239770:CDS 50.0%
AGACCAGTCTATCCAGCAAG+TGG - chr8_2:21706335-21706354 None:intergenic 50.0%
AATAGTGGCAGTGCGTGTAG+TGG + chr8_2:21704290-21704309 Msa1239770:five_prime_UTR 50.0%
! GTACGTACCTCGGAGGTTTT+AGG - chr8_2:21704570-21704589 None:intergenic 50.0%
!! ATCTTAACGGGTTCGGGTTC+CGG + chr8_2:21704606-21704625 Msa1239770:intron 50.0%
!! ATCCAACTGGTACCGGCAAA+GGG + chr8_2:21704818-21704837 Msa1239770:CDS 50.0%
AATACTAGTCCCCCCTTTGC+CGG - chr8_2:21704833-21704852 None:intergenic 50.0%
! GCAAAGGGGGGACTAGTATT+TGG + chr8_2:21704833-21704852 Msa1239770:CDS 50.0%
TGTTGTGCAGACTCCAACAG+GGG + chr8_2:21706253-21706272 Msa1239770:intron 50.0%
ATCGACCGCTTGCAGAGATA+AGG + chr8_2:21706282-21706301 Msa1239770:CDS 50.0%
AGACCAGTCTATCCAGCAAG+TGG - chr8_2:21706335-21706354 None:intergenic 50.0%
CGAAGTCCCTAAAACCTCCG+AGG + chr8_2:21704560-21704579 Msa1239770:CDS 55.0%
GGTGGAGATCCAACTGGTAC+CGG + chr8_2:21704811-21704830 Msa1239770:CDS 55.0%
!! GATCCAACTGGTACCGGCAA+AGG + chr8_2:21704817-21704836 Msa1239770:CDS 55.0%
!! TCCAACTGGTACCGGCAAAG+GGG + chr8_2:21704819-21704838 Msa1239770:CDS 55.0%
CGAAGTCCCTAAAACCTCCG+AGG + chr8_2:21704560-21704579 Msa1239770:CDS 55.0%
GGTGGAGATCCAACTGGTAC+CGG + chr8_2:21704811-21704830 Msa1239770:CDS 55.0%
!! GATCCAACTGGTACCGGCAA+AGG + chr8_2:21704817-21704836 Msa1239770:CDS 55.0%
!! TCCAACTGGTACCGGCAAAG+GGG + chr8_2:21704819-21704838 Msa1239770:CDS 55.0%
!! CCAACTGGTACCGGCAAAGG+GGG + chr8_2:21704820-21704839 Msa1239770:CDS 60.0%
!! CAACTGGTACCGGCAAAGGG+GGG + chr8_2:21704821-21704840 Msa1239770:CDS 60.0%
!! CCAACTGGTACCGGCAAAGG+GGG + chr8_2:21704820-21704839 Msa1239770:CDS 60.0%
!! CAACTGGTACCGGCAAAGGG+GGG + chr8_2:21704821-21704840 Msa1239770:CDS 60.0%
CCCCCTTTGCCGGTACCAGT+TGG - chr8_2:21704823-21704842 None:intergenic 65.0%
GTGCAGACTCCAACAGGGGC+AGG + chr8_2:21706257-21706276 Msa1239770:intron 65.0%
GGTCGATCACCTGCCCCTGT+TGG - chr8_2:21706269-21706288 None:intergenic 65.0%
CCCCCTTTGCCGGTACCAGT+TGG - chr8_2:21704823-21704842 None:intergenic 65.0%
GTGCAGACTCCAACAGGGGC+AGG + chr8_2:21706257-21706276 Msa1239770:intron 65.0%
GGTCGATCACCTGCCCCTGT+TGG - chr8_2:21706269-21706288 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 21704270 21706626 21704270 ID=Msa1239770;Name=Msa1239770
chr8_2 mRNA 21704270 21706626 21704270 ID=Msa1239770-mRNA-1;Parent=Msa1239770;Name=Msa1239770-mRNA-1;_AED=0.08;_eAED=0.08;_QI=146|0.75|0.8|1|0.75|0.8|5|280|153
chr8_2 exon 21704270 21704418 21704270 ID=Msa1239770-mRNA-1:exon:7796;Parent=Msa1239770-mRNA-1
chr8_2 exon 21704507 21704581 21704507 ID=Msa1239770-mRNA-1:exon:7797;Parent=Msa1239770-mRNA-1
chr8_2 exon 21704733 21704894 21704733 ID=Msa1239770-mRNA-1:exon:7798;Parent=Msa1239770-mRNA-1
chr8_2 exon 21705386 21705523 21705386 ID=Msa1239770-mRNA-1:exon:7799;Parent=Msa1239770-mRNA-1
chr8_2 exon 21706263 21706626 21706263 ID=Msa1239770-mRNA-1:exon:7800;Parent=Msa1239770-mRNA-1
chr8_2 five_prime_UTR 21704270 21704415 21704270 ID=Msa1239770-mRNA-1:five_prime_utr;Parent=Msa1239770-mRNA-1
chr8_2 CDS 21704416 21704418 21704416 ID=Msa1239770-mRNA-1:cds;Parent=Msa1239770-mRNA-1
chr8_2 CDS 21704507 21704581 21704507 ID=Msa1239770-mRNA-1:cds;Parent=Msa1239770-mRNA-1
chr8_2 CDS 21704733 21704894 21704733 ID=Msa1239770-mRNA-1:cds;Parent=Msa1239770-mRNA-1
chr8_2 CDS 21705386 21705523 21705386 ID=Msa1239770-mRNA-1:cds;Parent=Msa1239770-mRNA-1
chr8_2 CDS 21706263 21706346 21706263 ID=Msa1239770-mRNA-1:cds;Parent=Msa1239770-mRNA-1
chr8_2 three_prime_UTR 21706347 21706626 21706347 ID=Msa1239770-mRNA-1:three_prime_utr;Parent=Msa1239770-mRNA-1
Gene Sequence

>Msa1239770

ATGTCGGTTACTCTGCACACAAACCTAGGTGATATCAAATGCGAAATCTTCTGCGACGAAGTCCCTAAAACCTCCGAGAATTTTTTAGCGCTTTGTGCAAGTGGTTACTTTGATGGGACTATATTTCACCGCAATATTAAAGGTTTTATGATTCAAGGTGGAGATCCAACTGGTACCGGCAAAGGGGGGACTAGTATTTGGGGAAAGAAATTCAACGACGAGATAAGAGAATCTTTGAAGCATAATGCAAGGGGAATATTGTCAATGGCTAACAGTGGTCCAAATACTAATGGAAGTCAGTTCTTCATAAGTTATGCAAAACAACCACATTTGAATGGACTATACACCGTGTTTGGAAGAGTAATTCATGGATTTGAAACTCCAACAGGGGCAGGTGATCGACCGCTTGCAGAGATAAGGCTCAATCGTGTAACAATGCATTCTAATCCACTTGCTGGATAG
Protein sequence

>Msa1239770

MSVTLHTNLGDIKCEIFCDEVPKTSENFLALCASGYFDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFETPTGAGDRPLAEIRLNRVTMHSNPLAG*