AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308590 MtrunA17_Chr8g0335141 91.467 375 18 1 1 361 86 460 0.0 696
Msa1308590 MtrunA17_Chr8g0335161 82.667 375 51 1 1 361 84 458 0.0 642
Msa1308590 MtrunA17_Chr6g0459311 71.200 375 91 3 1 361 92 463 0.0 545
Msa1308590 MtrunA17_Chr6g0486251 69.333 375 98 3 1 361 85 456 0.0 528
Msa1308590 MtrunA17_Chr6g0486201 69.333 375 98 3 1 361 85 456 0.0 528
Msa1308590 MtrunA17_Chr8g0361371 55.352 383 143 7 1 361 86 462 1.71e-140 407
Msa1308590 MtrunA17_Chr8g0334831 52.041 392 151 8 1 361 85 470 9.87e-129 378
Msa1308590 MtrunA17_Chr7g0232311 47.354 378 175 8 1 361 85 455 8.18e-112 334
Msa1308590 MtrunA17_Chr8g0373301 47.778 360 170 9 8 360 109 457 7.31e-109 327
Msa1308590 MtrunA17_Chr7g0232401 50.000 348 161 8 19 361 120 459 1.63e-108 326
Msa1308590 MtrunA17_Chr8g0339451 47.658 363 177 6 16 370 107 464 6.49e-108 324
Msa1308590 MtrunA17_Chr8g0347281 47.262 347 174 6 16 360 124 463 2.64e-106 320
Msa1308590 MtrunA17_Chr7g0275511 48.563 348 168 8 16 358 123 464 2.82e-106 320
Msa1308590 MtrunA17_Chr8g0339461 46.006 363 183 6 16 370 115 472 4.02e-106 320
Msa1308590 MtrunA17_Chr8g0336741 47.324 355 178 6 10 361 115 463 2.51e-105 318
Msa1308590 MtrunA17_Chr8g0336731 47.606 355 177 6 10 361 134 482 3.13e-105 318
Msa1308590 MtrunA17_Chr7g0232411 47.384 344 171 6 19 358 117 454 4.10e-104 315
Msa1308590 MtrunA17_Chr7g0232391 46.742 353 178 6 10 358 108 454 3.06e-103 312
Msa1308590 MtrunA17_Chr7g0232341 47.536 345 170 7 19 358 117 455 3.09e-103 312
Msa1308590 MtrunA17_Chr6g0449931 51.020 343 155 8 22 358 121 456 1.37e-102 311
Msa1308590 MtrunA17_Chr8g0347271 44.199 362 191 7 1 360 112 464 4.85e-102 310
Msa1308590 MtrunA17_Chr8g0339601 48.358 335 160 6 43 369 1 330 1.07e-101 303
Msa1308590 MtrunA17_Chr8g0339631 46.389 360 181 7 16 369 115 468 1.74e-101 308
Msa1308590 MtrunA17_Chr8g0336651 48.732 355 173 6 10 361 108 456 3.22e-101 325
Msa1308590 MtrunA17_Chr8g0336651 43.979 382 187 9 1 361 860 1235 7.92e-95 307
Msa1308590 MtrunA17_Chr8g0336651 45.926 270 112 4 95 361 528 766 4.62e-66 226
Msa1308590 MtrunA17_Chr7g0232331 46.377 345 174 7 19 358 117 455 6.04e-100 304
Msa1308590 MtrunA17_Chr1g0153451 46.132 349 178 7 16 361 114 455 2.56e-99 302
Msa1308590 MtrunA17_Chr8g0334861 45.245 347 175 8 19 358 114 452 1.96e-98 300
Msa1308590 MtrunA17_Chr8g0334851 46.328 354 173 9 16 361 117 461 6.88e-96 293
Msa1308590 MtrunA17_Chr8g0336691 45.000 380 184 8 1 361 92 465 5.60e-93 303
Msa1308590 MtrunA17_Chr8g0336691 43.684 380 183 8 1 358 998 1368 1.59e-90 296
Msa1308590 MtrunA17_Chr8g0336691 41.292 356 174 7 9 361 581 904 8.38e-80 266
Msa1308590 MtrunA17_Chr8g0339441 44.972 358 149 6 16 369 116 429 1.55e-88 273
Msa1308590 MtrunA17_Chr8g0370941 40.201 398 192 12 3 361 90 480 1.61e-85 268
Msa1308590 MtrunA17_Chr1g0153461 57.635 203 84 2 160 361 3 204 1.39e-77 238
Msa1308590 MtrunA17_Chr5g0403641 45.091 275 139 5 99 361 220 494 7.72e-75 240
Msa1308590 MtrunA17_Chr6g0462551 39.193 347 187 8 19 358 124 453 9.81e-72 231
Msa1308590 MtrunA17_Chr3g0079731 37.883 359 206 6 16 361 118 472 4.90e-71 229
Msa1308590 MtrunA17_Chr7g0232351 43.144 299 148 6 1 282 85 378 3.94e-70 224
Msa1308590 MtrunA17_Chr6g0462531 36.932 352 195 8 16 358 120 453 3.33e-67 219
Msa1308590 MtrunA17_Chr6g0462521 35.429 350 194 7 16 358 115 439 4.85e-66 216
Msa1308590 MtrunA17_Chr6g0462541 35.530 349 203 6 16 358 120 452 4.49e-63 209
Msa1308590 MtrunA17_Chr6g0462571 34.286 350 207 9 16 358 117 450 9.83e-60 200
Msa1308590 MtrunA17_Chr5g0442561 35.359 362 201 13 16 358 114 461 7.81e-57 192
Msa1308590 MtrunA17_Chr5g0442581 35.262 363 202 12 16 358 116 465 8.61e-57 194
Msa1308590 MtrunA17_Chr5g0442541 33.241 361 210 10 16 358 107 454 1.14e-56 192
Msa1308590 MtrunA17_Chr2g0302991 34.831 356 200 11 16 358 115 451 1.46e-56 191
Msa1308590 MtrunA17_Chr5g0442491 33.521 355 217 8 16 358 116 463 2.46e-56 191
Msa1308590 MtrunA17_Chr2g0302961 34.270 356 198 11 16 358 122 454 2.64e-56 191
Msa1308590 MtrunA17_Chr4g0044511 36.785 367 177 13 19 358 155 493 1.97e-55 189
Msa1308590 MtrunA17_Chr5g0442521 32.778 360 215 10 16 358 115 464 3.45e-54 185
Msa1308590 MtrunA17_Chr5g0448521 33.795 361 210 12 16 358 107 456 6.42e-54 184
Msa1308590 MtrunA17_Chr5g0442601 34.807 362 203 13 16 358 517 864 1.01e-51 184
Msa1308590 MtrunA17_Chr5g0442601 35.034 294 160 7 16 305 67 333 9.45e-41 153
Msa1308590 MtrunA17_Chr5g0429711 32.394 355 204 12 16 358 120 450 5.69e-51 176
Msa1308590 MtrunA17_Chr8g0366391 39.231 260 131 3 114 358 219 466 8.89e-51 176
Msa1308590 MtrunA17_Chr5g0429681 32.665 349 200 11 16 350 156 483 9.79e-50 174
Msa1308590 MtrunA17_Chr4g0053501 33.427 356 210 12 16 360 116 455 5.82e-49 172
Msa1308590 MtrunA17_Chr7g0243871 37.329 292 154 8 94 369 194 472 7.49e-48 169
Msa1308590 MtrunA17_Chr6g0464921 33.798 287 158 6 99 370 187 456 1.14e-47 167
Msa1308590 MtrunA17_Chr6g0464881 33.425 362 193 14 25 369 124 454 1.18e-47 167
Msa1308590 MtrunA17_Chr5g0426401 37.025 316 151 13 46 345 5 288 1.39e-47 164
Msa1308590 MtrunA17_Chr4g0066151 37.363 273 137 9 113 360 207 470 1.43e-47 168
Msa1308590 MtrunA17_Chr6g0463861 36.704 267 143 8 113 358 201 462 1.69e-47 167
Msa1308590 MtrunA17_Chr5g0440421 34.066 364 209 10 17 363 134 483 7.17e-47 166
Msa1308590 MtrunA17_Chr3g0078841 32.303 356 197 13 25 358 133 466 7.65e-47 166
Msa1308590 MtrunA17_Chr7g0265141 31.781 365 193 9 26 358 134 474 1.01e-46 166
Msa1308590 MtrunA17_Chr5g0442511 30.141 355 206 10 16 358 158 482 1.23e-46 166
Msa1308590 MtrunA17_Chr7g0249981 32.172 373 191 14 17 365 128 462 1.61e-46 165
Msa1308590 MtrunA17_Chr3g0112771 37.282 287 153 8 80 358 173 440 1.88e-46 164
Msa1308590 MtrunA17_Chr7g0243781 36.842 304 159 11 74 358 175 464 2.66e-46 164
Msa1308590 MtrunA17_Chr4g0066281 37.778 270 134 9 114 360 199 457 2.95e-46 164
Msa1308590 MtrunA17_Chr4g0066221 32.410 361 197 12 24 358 130 469 4.79e-46 164
Msa1308590 MtrunA17_Chr4g0044521 31.622 370 201 10 16 358 111 455 5.19e-46 163
Msa1308590 MtrunA17_Chr7g0249961 37.344 241 121 6 137 365 33 255 5.35e-46 158
Msa1308590 MtrunA17_Chr6g0464871 32.951 349 196 9 32 360 127 457 6.48e-46 163
Msa1308590 MtrunA17_Chr5g0426431 35.165 364 184 16 19 358 131 466 1.01e-45 163
Msa1308590 MtrunA17_Chr8g0377921 32.873 362 196 10 23 360 116 454 2.60e-45 161
Msa1308590 MtrunA17_Chr5g0414331 31.551 374 214 10 3 360 97 444 7.28e-45 160
Msa1308590 MtrunA17_Chr4g0044501 32.687 361 204 12 17 358 124 464 1.58e-44 160
Msa1308590 MtrunA17_Chr3g0079711 48.087 183 82 3 187 361 3 180 1.98e-44 151
Msa1308590 MtrunA17_Chr6g0453951 30.357 336 188 11 37 358 212 515 2.17e-44 160
Msa1308590 MtrunA17_Chr3g0092641 32.880 368 201 14 12 358 124 466 3.71e-44 159
Msa1308590 MtrunA17_Chr8g0359821 33.134 335 172 12 41 358 167 466 4.29e-44 159
Msa1308590 MtrunA17_Chr8g0374971 36.842 266 142 7 114 358 209 469 4.64e-44 159
Msa1308590 MtrunA17_Chr7g0265151 33.117 308 167 9 81 358 174 472 5.84e-44 158
Msa1308590 MtrunA17_Chr5g0414321 34.471 293 163 6 80 360 167 442 6.81e-44 157
Msa1308590 MtrunA17_Chr6g0464841 32.231 363 182 13 23 360 122 445 6.96e-44 157
Msa1308590 MtrunA17_Chr8g0374901 35.127 316 175 11 65 358 160 467 9.91e-44 157
Msa1308590 MtrunA17_Chr6g0454151 34.899 298 159 12 74 358 191 466 1.06e-43 157
Msa1308590 MtrunA17_Chr6g0454201 33.133 332 176 12 41 358 170 469 1.17e-43 157
Msa1308590 MtrunA17_Chr6g0454261 31.778 343 198 13 30 358 148 468 1.60e-43 157
Msa1308590 MtrunA17_Chr4g0042891 33.824 340 198 12 25 348 124 452 2.17e-43 156
Msa1308590 MtrunA17_Chr6g0454401 30.723 332 184 10 41 358 170 469 2.33e-43 157
Msa1308590 MtrunA17_Chr7g0265041 35.583 326 168 11 56 358 171 477 2.71e-43 157
Msa1308590 MtrunA17_Chr1g0173121 34.982 283 173 7 82 359 176 452 3.33e-43 155
Msa1308590 MtrunA17_Chr4g0053321 37.600 250 136 8 119 358 229 468 3.45e-43 156
Msa1308590 MtrunA17_Chr7g0217881 31.471 340 197 10 37 358 129 450 3.45e-43 155
Msa1308590 MtrunA17_Chr5g0420801 39.442 251 136 7 114 360 211 449 4.40e-43 155
Msa1308590 MtrunA17_Chr6g0454341 30.423 355 205 12 25 358 133 466 4.84e-43 155
Msa1308590 MtrunA17_Chr2g0329111 38.983 236 131 6 113 343 216 443 5.71e-43 155
Msa1308590 MtrunA17_Chr4g0014061 33.224 304 168 8 80 359 170 462 6.20e-43 155
Msa1308590 MtrunA17_Chr7g0218831 37.549 253 129 9 99 346 191 419 6.36e-43 154
Msa1308590 MtrunA17_Chr7g0218811 31.977 344 197 11 23 360 128 440 7.10e-43 154
Msa1308590 MtrunA17_Chr7g0275681 33.233 331 174 9 54 358 160 469 8.65e-43 155
Msa1308590 MtrunA17_Chr8g0377941 31.707 369 214 10 6 360 108 452 9.94e-43 154
Msa1308590 MtrunA17_Chr5g0401721 31.765 340 195 10 43 361 139 462 1.56e-42 154
Msa1308590 MtrunA17_Chr6g0464861 32.303 356 187 14 25 360 123 444 1.62e-42 154
Msa1308590 MtrunA17_Chr1g0159551 33.803 284 176 5 82 359 172 449 1.88e-42 154
Msa1308590 MtrunA17_Chr6g0454191 31.627 332 181 11 41 358 170 469 2.09e-42 154
Msa1308590 MtrunA17_Chr3g0118671 36.576 257 133 7 115 358 223 462 2.24e-42 154
Msa1308590 MtrunA17_Chr4g0044481 34.921 252 132 3 90 332 196 424 3.54e-42 152
Msa1308590 MtrunA17_Chr7g0265051 35.926 270 134 6 114 358 218 473 3.75e-42 154
Msa1308590 MtrunA17_Chr7g0243801 31.807 393 207 14 5 358 95 465 4.88e-42 153
Msa1308590 MtrunA17_Chr6g0454121 31.361 338 186 13 37 360 164 469 5.88e-42 153
Msa1308590 MtrunA17_Chr6g0454321 30.286 350 200 14 25 352 133 460 8.02e-42 155
Msa1308590 MtrunA17_Chr6g0454301 29.919 371 215 11 1 358 381 719 1.10e-41 155
Msa1308590 MtrunA17_Chr6g0454301 33.065 248 131 7 137 366 3 233 4.10e-35 136
Msa1308590 MtrunA17_Chr7g0243771 38.258 264 133 8 114 358 212 464 1.31e-41 152
Msa1308590 MtrunA17_Chr5g0423981 32.198 323 176 10 48 358 142 433 2.44e-41 150
Msa1308590 MtrunA17_Chr6g0453961 31.579 323 178 9 48 358 187 478 2.47e-41 151
Msa1308590 MtrunA17_Chr4g0066131 35.316 269 144 10 113 358 202 463 3.13e-41 151
Msa1308590 MtrunA17_Chr7g0249931 35.231 281 147 10 101 365 218 479 3.23e-41 151
Msa1308590 MtrunA17_Chr4g0066261 33.000 300 174 9 83 360 178 472 3.28e-41 151
Msa1308590 MtrunA17_Chr7g0218841 35.401 274 139 11 87 346 171 420 4.53e-41 149
Msa1308590 MtrunA17_Chr6g0463851 33.003 303 166 10 80 358 182 471 5.35e-41 150
Msa1308590 MtrunA17_Chr6g0454181 31.627 332 181 13 41 358 169 468 5.78e-41 150
Msa1308590 MtrunA17_Chr3g0118721 35.409 257 136 7 115 358 39 278 6.85e-41 145
Msa1308590 MtrunA17_Chr6g0454141 33.038 339 175 15 37 358 165 468 7.24e-41 150
Msa1308590 MtrunA17_Chr8g0336331 33.119 311 168 12 64 358 179 465 7.98e-41 150
Msa1308590 MtrunA17_Chr7g0218791 31.373 357 197 11 9 344 96 425 8.37e-41 149
Msa1308590 MtrunA17_Chr8g0374941 35.897 273 137 10 113 358 1145 1406 8.39e-41 153
Msa1308590 MtrunA17_Chr8g0374941 34.572 269 138 10 113 354 207 464 2.92e-38 146
Msa1308590 MtrunA17_Chr8g0374941 34.859 284 145 8 113 363 672 948 3.37e-38 145
Msa1308590 MtrunA17_Chr7g0265101 33.948 271 139 6 114 358 219 475 8.55e-41 150
Msa1308590 MtrunA17_Chr2g0278711 33.425 365 184 13 25 358 129 465 8.66e-41 149
Msa1308590 MtrunA17_Chr4g0032331 39.357 249 126 7 114 353 205 437 1.34e-40 149
Msa1308590 MtrunA17_Chr6g0454131 33.110 299 169 11 74 360 190 469 2.42e-40 148
Msa1308590 MtrunA17_Chr4g0066201 33.688 282 160 7 97 358 189 463 3.02e-40 148
Msa1308590 MtrunA17_Chr6g0454271 33.898 295 155 10 81 358 4 275 4.01e-40 143
Msa1308590 MtrunA17_Chr5g0401851 30.667 375 203 10 16 358 123 472 4.15e-40 148
Msa1308590 MtrunA17_Chr1g0207981 34.420 276 156 6 104 369 212 472 4.47e-40 147
Msa1308590 MtrunA17_Chr8g0350881 36.900 271 135 8 114 358 209 469 6.26e-40 147
Msa1308590 MtrunA17_Chr4g0050341 29.972 357 208 9 25 358 142 479 6.70e-40 147
Msa1308590 MtrunA17_Chr4g0066171 32.990 291 168 8 88 358 182 465 6.81e-40 147
Msa1308590 MtrunA17_Chr4g0072761 35.145 276 150 7 83 358 195 441 7.36e-40 146
Msa1308590 MtrunA17_Chr5g0412111 30.878 353 211 10 19 358 118 450 7.72e-40 147
Msa1308590 MtrunA17_Chr3g0118771 35.135 259 138 7 113 358 236 477 9.76e-40 147
Msa1308590 MtrunA17_Chr5g0412101 31.622 370 191 13 18 358 123 459 1.79e-39 146
Msa1308590 MtrunA17_Chr1g0207951 30.000 320 176 10 52 360 279 561 1.94e-39 149
Msa1308590 MtrunA17_Chr1g0207951 33.835 266 147 7 115 370 863 1109 4.50e-39 148
Msa1308590 MtrunA17_Chr7g0243681 33.121 314 177 8 65 358 168 468 2.01e-39 146
Msa1308590 MtrunA17_Chr8g0365811 31.385 325 177 10 52 360 654 948 2.02e-39 149
Msa1308590 MtrunA17_Chr8g0365811 31.988 322 193 10 25 334 133 440 3.47e-39 148
Msa1308590 MtrunA17_Chr2g0294941 32.603 365 194 17 18 351 18 361 2.14e-39 144
Msa1308590 MtrunA17_Chr4g0011051 34.875 281 145 8 114 369 220 487 2.19e-39 146
Msa1308590 MtrunA17_Chr8g0382021 37.308 260 150 6 107 359 225 478 2.65e-39 145
Msa1308590 MtrunA17_Chr3g0112761 30.994 342 208 9 25 358 117 438 2.79e-39 145
Msa1308590 MtrunA17_Chr7g0243631 33.229 319 175 8 65 358 170 475 2.93e-39 145
Msa1308590 MtrunA17_Chr7g0218821 29.577 355 201 12 23 365 129 446 2.94e-39 145
Msa1308590 MtrunA17_Chr6g0454331 31.642 335 185 12 37 358 164 467 3.42e-39 145
Msa1308590 MtrunA17_Chr1g0161351 31.034 348 210 12 25 360 159 488 3.68e-39 145
Msa1308590 MtrunA17_Chr8g0337381 57.500 120 48 2 242 361 1 117 4.14e-39 135
Msa1308590 MtrunA17_Chr8g0369341 37.200 250 144 5 114 360 220 459 4.90e-39 145
Msa1308590 MtrunA17_Chr1g0207931 33.216 283 162 8 86 358 221 486 5.04e-39 145
Msa1308590 MtrunA17_Chr1g0179901 33.333 282 153 9 100 358 213 482 5.06e-39 145
Msa1308590 MtrunA17_Chr7g0218311 35.581 267 144 7 113 358 213 472 6.04e-39 145
Msa1308590 MtrunA17_Chr4g0060511 35.075 268 140 6 114 358 220 476 6.47e-39 145
Msa1308590 MtrunA17_Chr5g0419771 34.586 266 144 7 114 358 245 501 6.91e-39 145
Msa1308590 MtrunA17_Chr1g0207861 31.322 348 209 11 25 360 130 459 7.25e-39 144
Msa1308590 MtrunA17_Chr6g0454211 31.269 323 178 10 48 358 465 755 7.85e-39 147
Msa1308590 MtrunA17_Chr6g0454211 29.508 244 112 11 51 282 41 236 4.09e-20 92.0
Msa1308590 MtrunA17_Chr6g0454291 30.723 332 184 11 41 358 166 465 9.39e-39 144
Msa1308590 MtrunA17_Chr5g0431361 31.707 328 188 10 45 360 141 444 1.00e-38 143
Msa1308590 MtrunA17_Chr3g0098111 29.598 348 215 9 25 360 131 460 1.01e-38 144
Msa1308590 MtrunA17_Chr3g0122001 32.133 361 204 14 25 360 120 464 1.02e-38 147
Msa1308590 MtrunA17_Chr3g0122001 32.410 361 202 16 25 360 600 943 8.19e-37 141
Msa1308590 MtrunA17_Chr2g0294931 35.955 267 142 8 114 358 211 470 1.11e-38 144
Msa1308590 MtrunA17_Chr3g0118701 28.533 375 224 11 7 358 118 471 1.65e-38 143
Msa1308590 MtrunA17_Chr7g0235051 33.750 320 171 9 65 358 138 442 1.83e-38 143
Msa1308590 MtrunA17_Chr3g0118691 28.926 363 214 11 19 358 130 471 3.79e-38 142
Msa1308590 MtrunA17_Chr8g0367221 37.179 234 135 3 113 344 1496 1719 4.14e-38 145
Msa1308590 MtrunA17_Chr8g0367221 32.759 232 144 3 115 344 221 442 5.28e-33 130
Msa1308590 MtrunA17_Chr8g0367221 33.621 232 142 3 115 344 1008 1229 1.49e-32 129
Msa1308590 MtrunA17_Chr3g0118661 31.024 332 180 10 23 329 132 439 4.19e-38 142
Msa1308590 MtrunA17_Chr5g0412131 30.899 356 211 9 18 358 123 458 4.57e-38 142
Msa1308590 MtrunA17_Chr8g0380531 31.186 388 196 14 2 358 99 446 7.20e-38 141
Msa1308590 MtrunA17_Chr4g0042931 31.667 360 211 14 12 348 103 450 1.06e-37 141
Msa1308590 MtrunA17_Chr6g0454361 30.655 336 187 12 37 358 166 469 1.38e-37 141
Msa1308590 MtrunA17_Chr3g0118711 34.241 257 139 7 115 358 230 469 1.50e-37 141
Msa1308590 MtrunA17_Chr2g0294921 35.206 267 144 8 114 358 360 619 1.96e-37 142
Msa1308590 MtrunA17_Chr5g0419761 33.443 305 161 11 74 358 192 474 2.56e-37 140
Msa1308590 MtrunA17_Chr7g0243931 35.075 268 140 7 114 358 223 479 2.57e-37 140
Msa1308590 MtrunA17_Chr8g0355221 37.395 238 122 6 140 358 246 475 2.83e-37 140
Msa1308590 MtrunA17_Chr6g0454221 35.043 234 123 7 137 358 3 219 2.99e-37 136
Msa1308590 MtrunA17_Chr1g0207971 30.252 357 194 14 25 360 122 444 3.46e-37 139
Msa1308590 MtrunA17_Chr6g0482061 29.240 342 206 13 26 349 139 462 4.66e-37 139
Msa1308590 MtrunA17_Chr3g0106251 31.469 286 165 8 82 359 21 283 6.55e-37 135
Msa1308590 MtrunA17_Chr6g0452771 29.891 368 212 13 16 358 122 468 7.08e-37 139
Msa1308590 MtrunA17_Chr3g0121991 39.706 204 109 6 161 360 343 536 1.04e-36 139
Msa1308590 MtrunA17_Chr7g0243951 35.448 268 138 7 114 358 217 472 1.10e-36 139
Msa1308590 MtrunA17_Chr8g0334841 47.518 141 71 2 80 218 6 145 1.13e-36 130
Msa1308590 MtrunA17_Chr7g0250001 31.667 300 163 12 73 360 169 438 5.85e-36 136
Msa1308590 MtrunA17_Chr7g0243811 36.948 249 135 8 65 305 141 375 1.14e-35 134
Msa1308590 MtrunA17_Chr7g0243761 35.055 271 128 9 114 355 217 468 1.26e-35 135
Msa1308590 MtrunA17_Chr5g0428081 33.208 265 152 6 114 358 209 468 1.36e-35 135
Msa1308590 MtrunA17_Chr7g0243711 39.234 209 105 4 161 358 108 305 1.66e-35 132
Msa1308590 MtrunA17_Chr6g0454171 33.829 269 128 10 104 358 66 298 1.70e-35 132
Msa1308590 MtrunA17_Chr1g0207831 29.096 354 204 11 25 360 130 454 1.97e-35 135
Msa1308590 MtrunA17_Chr8g0374931 34.831 267 145 9 114 358 211 470 2.01e-35 135
Msa1308590 MtrunA17_Chr7g0243851 35.185 270 137 8 114 358 175 431 4.40e-35 134
Msa1308590 MtrunA17_Chr7g0265111 37.611 226 118 6 145 360 294 506 4.45e-35 135
Msa1308590 MtrunA17_Chr5g0431441 30.933 375 199 14 12 359 114 455 4.92e-35 134
Msa1308590 MtrunA17_Chr5g0393591 35.238 210 108 4 160 369 254 435 5.19e-35 133
Msa1308590 MtrunA17_Chr8g0361411 35.581 267 128 8 114 360 202 444 6.21e-35 133
Msa1308590 MtrunA17_Chr2g0278721 36.179 246 139 6 103 344 721 952 8.39e-35 135
Msa1308590 MtrunA17_Chr2g0278721 34.711 242 138 5 109 344 214 441 6.11e-32 127
Msa1308590 MtrunA17_Chr5g0416741 30.000 380 211 13 11 358 116 472 9.62e-35 133
Msa1308590 MtrunA17_Chr3g0106231 31.333 300 162 8 81 358 163 440 1.25e-34 132
Msa1308590 MtrunA17_Chr6g0454351 28.144 334 191 11 32 358 162 453 1.65e-34 132
Msa1308590 MtrunA17_Chr7g0243861 36.431 269 135 7 114 358 220 476 2.00e-34 132
Msa1308590 MtrunA17_Chr7g0243911 41.791 201 91 6 161 349 22 208 2.78e-34 126
Msa1308590 MtrunA17_Chr1g0165701 37.037 216 114 4 153 358 269 472 3.61e-34 132
Msa1308590 MtrunA17_Chr7g0243611 36.957 230 113 7 114 322 78 296 7.52e-34 127
Msa1308590 MtrunA17_Chr5g0409591 35.178 253 140 7 114 346 212 460 8.08e-34 130
Msa1308590 MtrunA17_Chr4g0072771 30.961 281 165 6 82 358 199 454 1.16e-32 127
Msa1308590 MtrunA17_Chr4g0029131 29.846 325 204 8 25 343 123 429 1.36e-32 129
Msa1308590 MtrunA17_Chr5g0431401 30.149 335 186 12 42 360 137 439 2.57e-32 126
Msa1308590 MtrunA17_Chr5g0432731 30.657 274 162 6 94 358 31 285 2.82e-32 123
Msa1308590 MtrunA17_Chr2g0278741 34.274 248 143 5 103 344 290 523 3.40e-32 127
Msa1308590 MtrunA17_Chr4g0069611 32.389 247 147 4 104 344 204 436 7.59e-32 125
Msa1308590 MtrunA17_Chr2g0307961 34.733 262 133 8 114 360 221 459 8.26e-32 125
Msa1308590 MtrunA17_Chr8g0336321 34.199 231 130 5 122 343 222 439 1.74e-31 124
Msa1308590 MtrunA17_Chr5g0410941 32.014 278 160 8 114 369 219 489 1.82e-31 124
Msa1308590 MtrunA17_Chr4g0029151 37.158 183 105 3 162 343 264 437 2.43e-31 123
Msa1308590 MtrunA17_Chr5g0431421 30.368 326 189 11 46 360 141 439 4.16e-31 122
Msa1308590 MtrunA17_Chr5g0427571 37.037 189 107 3 155 343 97 273 1.29e-30 118
Msa1308590 MtrunA17_Chr8g0336251 33.766 231 131 5 122 343 222 439 2.01e-30 121
Msa1308590 MtrunA17_Chr6g0463891 32.721 272 138 8 114 358 220 473 1.60e-29 119
Msa1308590 MtrunA17_Chr8g0355011 29.450 309 152 11 41 346 93 338 3.49e-29 116
Msa1308590 MtrunA17_Chr7g0241781 35.885 209 109 6 141 345 218 405 5.19e-29 116
Msa1308590 MtrunA17_Chr4g0039881 32.645 242 143 5 109 344 186 413 6.60e-29 116
Msa1308590 MtrunA17_Chr6g0449991 39.450 218 102 9 25 236 124 317 6.66e-29 114
Msa1308590 MtrunA17_Chr3g0118751 31.154 260 118 6 113 358 221 433 1.15e-28 115
Msa1308590 MtrunA17_Chr5g0431371 30.657 274 147 8 103 360 193 439 1.45e-28 115
Msa1308590 MtrunA17_Chr1g0196851 35.714 182 109 2 162 343 296 469 1.50e-28 116
Msa1308590 MtrunA17_Chr3g0092031 35.714 182 103 3 163 344 6 173 1.82e-28 110
Msa1308590 MtrunA17_Chr8g0357361 35.500 200 108 5 114 305 63 249 6.91e-28 110
Msa1308590 MtrunA17_Chr6g0466831 31.128 257 155 7 104 354 207 447 7.72e-28 114
Msa1308590 MtrunA17_Chr6g0454371 35.260 173 95 5 186 358 4 159 7.78e-28 107
Msa1308590 MtrunA17_Chr5g0448551 28.097 331 198 13 16 329 112 419 1.10e-27 113
Msa1308590 MtrunA17_Chr7g0241801 32.456 228 129 6 122 345 199 405 4.69e-27 111
Msa1308590 MtrunA17_Chr2g0302851 31.148 244 144 5 109 344 210 437 6.54e-27 111
Msa1308590 MtrunA17_Chr6g0464091 31.855 248 149 5 103 344 213 446 7.54e-27 111
Msa1308590 MtrunA17_Chr2g0283041 28.634 227 150 3 109 335 206 420 1.27e-26 110
Msa1308590 MtrunA17_Chr6g0454251 30.189 265 134 11 37 282 162 394 2.85e-26 108
Msa1308590 MtrunA17_Chr6g0466841 30.350 257 157 7 104 354 207 447 3.39e-26 109
Msa1308590 MtrunA17_Chr5g0416821 33.210 271 126 10 114 358 221 462 7.45e-26 108
Msa1308590 MtrunA17_Chr4g0040691 31.602 231 145 4 112 342 210 427 1.22e-25 107
Msa1308590 MtrunA17_Chr4g0066141 37.086 151 84 3 221 360 192 342 9.30e-25 103
Msa1308590 MtrunA17_Chr8g0336261 35.333 150 80 5 183 332 1 133 1.14e-23 95.1
Msa1308590 MtrunA17_Chr6g0454231 27.953 254 122 7 113 358 6 206 1.27e-22 99.0
Msa1308590 MtrunA17_Chr4g0040711 33.333 180 107 3 163 342 261 427 2.65e-22 97.8
Msa1308590 MtrunA17_Chr5g0431431 29.771 262 142 7 74 326 116 344 2.76e-22 96.7
Msa1308590 MtrunA17_Chr7g0231631 31.618 272 131 9 112 358 7 248 9.36e-22 93.6
Msa1308590 MtrunA17_Chr1g0207881 36.806 144 81 4 218 358 237 373 2.80e-21 94.4
Msa1308590 MtrunA17_Chr2g0319761 34.595 185 108 3 163 344 259 433 2.42e-20 92.0
Msa1308590 MtrunA17_Chr5g0442551 28.049 246 143 9 16 252 74 294 3.18e-20 89.7
Msa1308590 MtrunA17_Chr2g0321331 33.714 175 87 4 168 342 91 236 4.55e-20 89.0
Msa1308590 MtrunA17_Chr5g0442501 28.283 198 132 4 16 209 114 305 6.33e-20 89.4
Msa1308590 MtrunA17_Chr2g0319791 34.426 183 107 4 161 342 257 427 1.04e-19 90.1
Msa1308590 MtrunA17_Chr2g0319751 35.519 183 105 4 161 342 734 904 2.44e-19 90.1
Msa1308590 MtrunA17_Chr2g0319751 39.316 117 68 2 227 342 289 403 5.35e-18 85.9
Msa1308590 MtrunA17_Chr2g0319731 34.973 183 102 4 163 342 276 444 5.19e-19 88.2
Msa1308590 MtrunA17_Chr4g0029161 27.077 325 185 10 25 343 123 401 2.23e-18 86.3
Msa1308590 MtrunA17_Chr2g0319801 35.519 183 101 4 163 342 259 427 5.32e-18 85.1
Msa1308590 MtrunA17_Chr3g0079721 29.143 175 111 5 16 181 118 288 2.45e-17 81.6
Msa1308590 MtrunA17_Chr6g0469961 36.620 142 75 5 73 203 27 164 3.29e-17 78.2
Msa1308590 MtrunA17_Chr7g0243731 46.479 71 38 0 236 306 2 72 1.20e-16 74.3
Msa1308590 MtrunA17_Chr6g0453941 27.638 199 115 7 38 222 88 271 1.66e-16 79.0
Msa1308590 MtrunA17_Chr6g0449971 53.731 67 30 1 292 358 1 66 2.63e-15 70.9
Msa1308590 MtrunA17_Chr6g0453981 31.507 146 86 5 74 207 61 204 6.83e-14 70.5
Msa1308590 MtrunA17_Chr6g0454111 30.952 168 90 5 48 203 30 183 1.60e-12 65.5
Msa1308590 MtrunA17_Chr6g0454391 44.776 67 32 2 259 325 13 74 3.81e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308590 AT4G01070.1 48.000 350 172 7 16 361 116 459 1.80e-107 324
Msa1308590 AT1G01420.2 48.718 351 167 9 16 361 119 461 1.89e-104 316
Msa1308590 AT1G01420.1 48.718 351 167 9 16 361 116 458 1.95e-104 316
Msa1308590 AT1G01390.1 47.934 363 178 8 3 361 104 459 1.55e-99 303
Msa1308590 AT1G01390.2 47.934 363 178 8 3 361 121 476 2.13e-99 303
Msa1308590 AT3G50740.1 41.076 353 190 6 16 357 115 460 1.30e-81 258
Msa1308590 AT5G26310.1 37.368 380 204 9 1 356 83 452 4.04e-79 251
Msa1308590 AT5G66690.1 38.259 379 202 8 1 356 83 452 6.90e-78 248
Msa1308590 AT4G36770.1 40.346 347 184 9 16 351 111 445 3.66e-73 234
Msa1308590 AT2G18570.1 38.196 377 200 13 1 358 93 455 2.73e-72 233
Msa1308590 AT3G16520.3 38.462 351 194 9 16 361 118 451 2.94e-72 233
Msa1308590 AT2G18560.1 37.534 373 207 10 1 358 4 365 5.84e-70 224
Msa1308590 AT3G16520.2 37.971 345 192 9 16 355 118 445 9.38e-70 226
Msa1308590 AT3G16520.1 37.971 345 192 9 16 355 118 445 1.15e-69 225
Msa1308590 AT3G21790.1 36.585 369 212 10 16 370 119 479 5.97e-67 219
Msa1308590 AT1G07260.1 35.977 353 199 9 16 358 125 460 4.83e-65 214
Msa1308590 AT3G21800.1 35.890 365 211 9 16 365 115 471 5.24e-64 211
Msa1308590 AT1G07250.1 36.261 353 201 8 25 369 136 472 8.08e-64 211
Msa1308590 AT4G15260.1 34.278 353 216 7 18 361 1 346 6.98e-63 205
Msa1308590 AT3G21780.1 37.088 364 197 10 16 361 111 460 6.90e-61 203
Msa1308590 AT4G15280.1 34.160 363 208 9 16 361 117 465 2.50e-60 202
Msa1308590 AT3G21750.1 34.959 369 200 9 16 361 109 460 3.14e-60 201
Msa1308590 AT4G15280.2 34.160 363 208 9 16 361 149 497 3.97e-60 202
Msa1308590 AT2G29740.1 34.943 352 202 11 16 358 130 463 1.01e-59 200
Msa1308590 AT3G21760.1 36.267 375 195 11 16 365 121 476 2.06e-59 199
Msa1308590 AT2G29730.1 33.803 355 205 11 16 361 121 454 3.65e-59 198
Msa1308590 AT2G29750.1 33.523 352 206 11 16 358 130 462 5.86e-57 193
Msa1308590 AT4G01070.2 45.378 238 119 7 16 249 116 346 1.83e-55 186
Msa1308590 AT2G29710.1 32.768 354 209 10 17 361 121 454 1.37e-54 186
Msa1308590 AT1G07240.1 32.880 368 215 10 16 369 126 475 1.52e-54 187
Msa1308590 AT2G15490.1 38.521 257 139 5 114 358 220 469 3.16e-51 178
Msa1308590 AT2G15490.3 39.300 257 134 6 114 358 220 466 7.23e-51 177
Msa1308590 AT1G05675.1 34.746 354 186 10 25 360 117 443 2.75e-50 175
Msa1308590 AT2G31790.1 36.364 297 145 10 85 360 174 447 2.33e-49 172
Msa1308590 AT1G05680.1 33.714 350 197 8 25 361 117 444 2.34e-49 172
Msa1308590 AT2G15480.1 37.354 257 139 5 114 358 223 469 3.22e-49 172
Msa1308590 AT4G34131.1 33.426 359 202 11 16 358 131 468 3.34e-49 172
Msa1308590 AT2G15480.2 36.704 267 137 6 114 358 223 479 1.78e-48 171
Msa1308590 AT2G36780.1 33.144 353 202 9 26 358 139 477 8.53e-48 169
Msa1308590 AT3G53160.1 39.015 264 133 6 114 358 217 471 9.05e-48 169
Msa1308590 AT5G14860.1 32.796 372 213 9 10 361 113 467 2.24e-47 168
Msa1308590 AT1G22400.1 35.756 344 173 13 32 358 158 470 3.60e-47 167
Msa1308590 AT4G34138.1 32.055 365 193 8 17 358 135 467 5.81e-47 167
Msa1308590 AT2G36770.1 36.491 285 150 9 95 358 203 477 8.92e-47 166
Msa1308590 AT2G36800.1 31.680 363 197 9 25 358 136 476 1.22e-46 166
Msa1308590 AT2G36750.1 30.914 372 206 9 26 369 135 483 1.43e-46 166
Msa1308590 AT2G16890.2 37.500 264 144 5 103 360 210 458 1.75e-46 165
Msa1308590 AT2G36760.1 36.364 275 147 5 114 369 223 488 1.94e-46 166
Msa1308590 AT1G22340.1 34.066 364 192 14 19 358 131 470 2.89e-46 165
Msa1308590 AT2G43820.1 32.869 359 178 14 23 358 117 435 3.67e-46 164
Msa1308590 AT1G10400.1 37.413 286 150 7 83 360 189 453 2.02e-45 162
Msa1308590 AT2G31750.1 35.581 267 132 8 112 360 201 445 9.31e-45 160
Msa1308590 AT2G31750.2 35.581 267 132 8 112 360 201 445 1.24e-44 160
Msa1308590 AT2G23260.1 30.857 350 203 7 26 360 119 444 1.32e-44 160
Msa1308590 AT2G43840.2 34.014 294 154 8 83 358 164 435 1.34e-44 159
Msa1308590 AT4G34135.1 37.768 233 119 4 113 331 223 443 8.10e-44 158
Msa1308590 AT2G43840.1 33.673 294 155 8 83 358 164 435 1.56e-43 157
Msa1308590 AT3G53150.1 31.937 382 182 12 25 358 147 498 3.83e-43 157
Msa1308590 AT1G22380.1 34.024 338 173 11 32 352 158 462 6.06e-43 156
Msa1308590 AT1G22360.1 33.913 345 179 11 32 359 155 467 6.58e-43 155
Msa1308590 AT2G36790.1 30.851 376 204 9 25 369 137 487 7.81e-42 153
Msa1308590 AT2G23250.1 31.908 304 181 6 65 360 141 426 1.29e-41 151
Msa1308590 AT2G16890.3 37.391 230 124 4 103 327 210 424 4.01e-41 150
Msa1308590 AT5G03490.1 31.445 353 188 13 23 358 136 451 6.97e-41 150
Msa1308590 AT4G15550.1 34.160 363 211 11 6 358 118 462 8.47e-41 150
Msa1308590 AT1G05530.1 31.214 346 207 10 25 360 121 445 1.50e-40 149
Msa1308590 AT5G17050.1 29.661 354 219 8 15 360 116 447 1.70e-40 149
Msa1308590 AT1G24100.1 39.806 206 108 2 156 361 261 450 3.08e-40 148
Msa1308590 AT1G05560.1 31.124 347 207 11 23 360 119 442 8.05e-40 147
Msa1308590 AT1G05560.2 35.600 250 150 6 115 360 250 492 1.09e-39 147
Msa1308590 AT1G78270.1 34.021 291 161 7 77 353 190 463 1.13e-39 147
Msa1308590 AT3G55700.1 30.925 346 214 9 18 360 118 441 1.42e-39 146
Msa1308590 AT2G36970.1 32.234 273 163 6 99 369 218 470 3.44e-39 145
Msa1308590 AT3G55710.1 30.702 342 210 8 26 360 124 445 3.55e-39 145
Msa1308590 AT1G22370.1 36.424 302 159 11 66 352 4 287 9.79e-39 140
Msa1308590 AT5G12890.1 31.143 350 206 12 25 358 140 470 1.13e-38 144
Msa1308590 AT5G05880.1 30.588 340 211 8 26 361 122 440 2.08e-38 143
Msa1308590 AT1G22360.2 33.333 321 168 10 32 333 155 448 2.10e-38 143
Msa1308590 AT3G46700.1 32.986 288 167 7 80 361 169 436 5.58e-38 142
Msa1308590 AT1G22370.2 33.521 355 201 11 12 352 124 457 8.82e-38 142
Msa1308590 AT3G46650.1 30.721 319 177 10 27 340 124 403 9.22e-38 141
Msa1308590 AT2G30140.2 31.085 341 206 8 23 358 123 439 1.99e-37 140
Msa1308590 AT1G30530.1 29.178 353 218 8 14 358 111 439 2.50e-37 140
Msa1308590 AT5G59580.1 29.888 358 222 10 11 358 98 436 5.41e-37 139
Msa1308590 AT5G38040.1 30.233 344 211 11 25 361 120 441 7.19e-37 139
Msa1308590 AT3G21560.1 30.855 269 162 6 102 360 209 463 9.05e-37 139
Msa1308590 AT3G46680.1 30.347 346 202 10 27 361 124 441 9.56e-37 138
Msa1308590 AT1G73880.1 35.317 252 141 6 114 358 219 455 9.99e-37 139
Msa1308590 AT4G15490.1 33.597 253 145 6 115 358 217 455 1.44e-36 138
Msa1308590 AT2G30140.1 31.778 343 202 10 23 358 123 440 1.52e-36 138
Msa1308590 AT1G51210.1 30.462 325 190 11 27 344 137 432 3.33e-36 137
Msa1308590 AT4G15480.1 30.058 346 213 9 26 360 142 469 6.15e-36 137
Msa1308590 AT3G46690.1 30.745 322 177 9 27 323 123 423 9.79e-36 135
Msa1308590 AT3G11340.1 32.526 289 165 9 79 358 166 433 1.30e-35 135
Msa1308590 AT5G38010.1 31.195 343 206 10 23 358 123 442 1.60e-35 135
Msa1308590 AT3G46670.1 33.218 289 164 8 80 361 174 440 3.38e-35 134
Msa1308590 AT2G28080.1 30.000 360 222 13 16 364 127 467 6.65e-35 134
Msa1308590 AT4G14090.1 33.068 251 142 8 115 358 213 444 1.16e-34 133
Msa1308590 AT5G59590.1 33.468 248 148 5 113 358 206 438 2.94e-34 132
Msa1308590 AT5G05890.1 33.217 286 170 8 80 361 176 444 3.99e-34 131
Msa1308590 AT4G15500.1 30.063 316 181 9 69 360 154 453 9.31e-34 130
Msa1308590 AT1G06000.1 36.187 257 145 7 114 360 177 424 2.77e-33 129
Msa1308590 AT2G26480.1 33.103 290 166 9 80 361 168 437 3.32e-33 129
Msa1308590 AT3G46660.1 34.375 224 130 5 140 361 239 447 8.41e-33 127
Msa1308590 AT5G17030.1 27.566 341 220 7 23 358 126 444 1.46e-32 127
Msa1308590 AT5G05860.1 32.530 249 150 5 113 358 203 436 2.43e-32 126
Msa1308590 AT5G65550.1 32.883 222 133 4 115 334 220 427 3.64e-32 126
Msa1308590 AT3G02100.1 34.167 240 118 7 115 344 228 437 2.68e-31 124
Msa1308590 AT5G17040.1 28.011 357 213 10 14 358 104 428 3.68e-31 123
Msa1308590 AT5G49690.1 31.897 232 138 3 113 342 215 428 3.97e-31 123
Msa1308590 AT5G05900.1 27.941 340 215 8 26 361 126 439 6.54e-31 122
Msa1308590 AT5G05870.1 33.480 227 132 5 139 361 235 446 8.24e-31 122
Msa1308590 AT2G22590.1 30.769 247 156 6 104 345 210 446 3.41e-30 120
Msa1308590 AT3G46720.1 32.526 289 159 8 80 361 173 432 9.14e-30 119
Msa1308590 AT2G30150.2 29.275 345 210 9 23 358 122 441 1.33e-29 119
Msa1308590 AT2G30150.1 29.275 345 210 9 23 358 106 425 1.37e-29 119
Msa1308590 AT5G17040.2 29.054 296 180 7 70 358 54 326 1.77e-29 116
Msa1308590 AT5G54010.1 33.333 219 134 3 117 335 205 411 1.88e-29 118
Msa1308590 AT3G22250.1 32.218 239 123 9 121 347 231 442 3.69e-29 117
Msa1308590 AT5G53990.1 34.404 218 123 5 141 353 226 428 1.19e-28 116
Msa1308590 AT3G29630.1 33.953 215 123 3 144 353 231 431 6.82e-28 114
Msa1308590 AT1G64910.1 30.147 272 154 8 96 352 177 427 1.11e-27 113
Msa1308590 AT3G29630.2 34.951 206 115 4 153 353 214 405 1.19e-27 113
Msa1308590 AT4G27570.1 36.571 175 100 2 161 335 248 411 2.05e-27 112
Msa1308590 AT1G50580.1 32.558 215 125 4 144 353 230 429 2.84e-26 109
Msa1308590 AT5G37950.1 31.010 287 166 10 11 283 76 344 7.22e-26 107
Msa1308590 AT4G27560.1 34.286 175 104 2 161 335 248 411 7.68e-26 108
Msa1308590 AT5G37950.2 29.965 287 163 9 11 283 76 338 8.72e-26 106
Msa1308590 AT4G09500.1 31.163 215 127 5 147 352 200 402 1.74e-24 103
Msa1308590 AT2G22930.1 27.801 241 161 4 96 335 177 405 2.52e-24 103
Msa1308590 AT4G09500.2 32.000 200 115 5 162 352 240 427 1.18e-23 102
Msa1308590 AT1G64920.1 30.000 230 141 6 117 340 199 414 3.31e-23 100
Msa1308590 AT5G54060.1 30.172 232 148 4 113 343 218 436 1.09e-21 96.7
Msa1308590 AT4G34135.2 36.538 104 57 2 113 207 223 326 4.81e-13 69.7

Find 66 sgRNAs with CRISPR-Local

Find 170 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTAATTCAATGTGTTTA+AGG 0.145467 8_4:-4884320 Msa1308590:CDS
TTGGAAAGACACAAAGAAAA+TGG 0.215069 8_4:-4884084 Msa1308590:CDS
CATAAACACTTTCAATGATT+TGG 0.223134 8_4:-4884436 Msa1308590:CDS
TCTGTTCTTTATGTATGTTT+TGG 0.258567 8_4:-4884273 Msa1308590:CDS
CCACTTTCATCATCTATCTT+TGG 0.263576 8_4:+4883865 None:intergenic
ATTTGGAACCTGAGGTTATA+AGG 0.303175 8_4:-4884419 Msa1308590:CDS
CAACTCAATGAGTTAGCATT+TGG 0.306842 8_4:-4884225 Msa1308590:CDS
TTAACTTGTTCTTGAAGAAA+TGG 0.328095 8_4:+4884847 None:intergenic
GTATTTACCAAATGGTTTCT+TGG 0.330315 8_4:-4884103 Msa1308590:CDS
ACTTTGGAGAGTGTGGTTAA+TGG 0.345363 8_4:-4883973 Msa1308590:CDS
TTCAATGTGTTTAAGGTGGT+TGG 0.369384 8_4:-4884313 Msa1308590:CDS
GCACCACAAGTTGAGATTCT+TGG 0.370993 8_4:-4884042 Msa1308590:CDS
TATGAAACTGTGAATGTTCC+AGG 0.372485 8_4:-4884579 Msa1308590:CDS
CAAGCTTTCATCACCTTCCA+TGG 0.388818 8_4:+4883801 None:intergenic
GATCAGGAATATCTTTGATA+TGG 0.402947 8_4:+4884541 None:intergenic
ATTCTTGGTCATGGTTCAAT+TGG 0.403227 8_4:-4884027 Msa1308590:CDS
TGTCTTTCCAAGAAACCATT+TGG 0.403325 8_4:+4884096 None:intergenic
AATAGAGGCCACGCAATCAT+AGG 0.415417 8_4:+4883946 None:intergenic
ATCCTTTGTTCTGCAAATAG+AGG 0.418095 8_4:+4883931 None:intergenic
GCAGAGTTAACAGCTTTACT+TGG 0.420196 8_4:+4884159 None:intergenic
CCAAAGATAGATGATGAAAG+TGG 0.425477 8_4:-4883865 Msa1308590:CDS
GCTGTTGCAACAAGTGAAAA+TGG 0.443145 8_4:-4883739 Msa1308590:CDS
GAAATAGAGTCGTCGAGATA+CGG 0.446775 8_4:+4884630 None:intergenic
GGAATATCTTTGATATGGTA+AGG 0.448112 8_4:+4884546 None:intergenic
CCGTTAGAGTATTTACCAAA+TGG 0.450358 8_4:-4884111 Msa1308590:CDS
ATGGATTGGTTGTTCCATCA+TGG 0.450594 8_4:-4884065 Msa1308590:CDS
TTGTGGTTGGGGTTCAACTT+TGG 0.450652 8_4:-4883989 Msa1308590:CDS
AAGAAGTTGCTAACTGTGTA+AGG 0.451651 8_4:-4883828 Msa1308590:CDS
CTTTCACATAGAAGTGGATC+AGG 0.460832 8_4:+4884525 None:intergenic
ATTAGACTCATTTCTGTTGA+GGG 0.478061 8_4:+4884353 None:intergenic
TGAAAATGGTTCATCTAAGA+AGG 0.479932 8_4:-4883725 Msa1308590:CDS
TGAAGAAGCCTTATAACCTC+AGG 0.481252 8_4:+4884411 None:intergenic
TGGATTGGTTGTTCCATCAT+GGG 0.505053 8_4:-4884064 Msa1308590:CDS
GGGTTCAACTTTGGAGAGTG+TGG 0.511321 8_4:-4883980 Msa1308590:CDS
CAAGTTGAGATTCTTGGTCA+TGG 0.513039 8_4:-4884036 Msa1308590:CDS
AGAGTGAGATAAAATGATGT+TGG 0.515137 8_4:+4884654 None:intergenic
CATGGAAGGTGATGAAAGCT+TGG 0.517322 8_4:-4883800 Msa1308590:CDS
CATACATAAAGAACAGAACT+TGG 0.526486 8_4:+4884279 None:intergenic
TTTCTGTTGAGGGGTCCCAC+TGG 0.526590 8_4:+4884363 None:intergenic
CTTGATCTTTCACATAGAAG+TGG 0.528439 8_4:+4884519 None:intergenic
AATTAGACTCATTTCTGTTG+AGG 0.533858 8_4:+4884352 None:intergenic
GGAAATACAAAAGAGAATCA+AGG 0.536941 8_4:-4883779 Msa1308590:CDS
TCAACTTGTGGTGCCCATGA+TGG 0.543506 8_4:+4884051 None:intergenic
AAGACACAAAGAAAATGGAT+TGG 0.561752 8_4:-4884079 Msa1308590:CDS
TTAATTCAATGTGTTTAAGG+TGG 0.567516 8_4:-4884317 Msa1308590:CDS
GCATTTGGATTAGAATTGAG+TGG 0.582499 8_4:-4884210 Msa1308590:CDS
CCATTTGGTAAATACTCTAA+CGG 0.585513 8_4:+4884111 None:intergenic
AGAATCAAGGAATTGAGTGT+TGG 0.586449 8_4:-4883766 Msa1308590:CDS
ATTATTGACAGATGAGCTCA+AGG 0.593411 8_4:-4883899 Msa1308590:CDS
TTTCAATGATTTGGAACCTG+AGG 0.594195 8_4:-4884427 Msa1308590:CDS
TTAGACTCATTTCTGTTGAG+GGG 0.598976 8_4:+4884354 None:intergenic
TCTCGACGACTCTATTTCCT+CGG 0.603446 8_4:-4884625 Msa1308590:CDS
TTCTAAGAACTCTATTTCCG+AGG 0.605475 8_4:+4884608 None:intergenic
GAATATCTTTGATATGGTAA+GGG 0.608277 8_4:+4884547 None:intergenic
ACATAAAGAACAGAACTTGG+TGG 0.614992 8_4:+4884282 None:intergenic
CAAAGATAGATGATGAAAGT+GGG 0.616010 8_4:-4883864 Msa1308590:CDS
TGGTAAGGGACTATACTACC+TGG 0.618036 8_4:+4884561 None:intergenic
GGCCTCTATTTGCAGAACAA+AGG 0.622122 8_4:-4883933 Msa1308590:CDS
ATGGTGTTCCTATGATTGCG+TGG 0.650757 8_4:-4883954 Msa1308590:CDS
ATCTCGATGCTAAAGAAGAG+AGG 0.651749 8_4:+4883700 None:intergenic
TGACCAAGAATCTCAACTTG+TGG 0.660415 8_4:+4884039 None:intergenic
TGTGTAAGGAGAACCATGGA+AGG 0.677955 8_4:-4883814 Msa1308590:CDS
ATGAGCTCAAGGTGGCTGTG+AGG 0.685126 8_4:-4883888 Msa1308590:CDS
TGATGTTGGAACAACTCCTG+AGG 0.688025 8_4:+4884668 None:intergenic
ATTGACAGATGAGCTCAAGG+TGG 0.752715 8_4:-4883896 Msa1308590:CDS
TAACTGTGTAAGGAGAACCA+TGG 0.789165 8_4:-4883818 Msa1308590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAATTCTCATTAGTTAA+TGG - chr8_4:4884102-4884121 Msa1308590:CDS 20.0%
!! ACATTAATTCAATGTGTTTA+AGG - chr8_4:4884247-4884266 Msa1308590:CDS 20.0%
!! CAAAAATTCTCATTAGTTAA+TGG - chr8_4:4884102-4884121 Msa1308590:CDS 20.0%
!! ACATTAATTCAATGTGTTTA+AGG - chr8_4:4884247-4884266 Msa1308590:CDS 20.0%
!!! TTAACTTGTTCTTGAAGAAA+TGG + chr8_4:4883723-4883742 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_4:4883757-4883776 None:intergenic 25.0%
! TTGTTCTGATTAAAGAAACA+AGG + chr8_4:4883767-4883786 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_4:4883757-4883776 None:intergenic 25.0%
! TACTGAAGATTAAAGAAACA+AGG + chr8_4:4883816-4883835 None:intergenic 25.0%
! GAATATCTTTGATATGGTAA+GGG + chr8_4:4884023-4884042 None:intergenic 25.0%
! CATAAACACTTTCAATGATT+TGG - chr8_4:4884131-4884150 Msa1308590:CDS 25.0%
! TTAATTCAATGTGTTTAAGG+TGG - chr8_4:4884250-4884269 Msa1308590:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG - chr8_4:4884294-4884313 Msa1308590:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG - chr8_4:4884295-4884314 Msa1308590:CDS 25.0%
!!! TTAACTTGTTCTTGAAGAAA+TGG + chr8_4:4883723-4883742 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_4:4883757-4883776 None:intergenic 25.0%
! TTGTTCTGATTAAAGAAACA+AGG + chr8_4:4883767-4883786 None:intergenic 25.0%
!!! TAAAGAAACAAGGTTAGTTT+TGG + chr8_4:4883757-4883776 None:intergenic 25.0%
! TACTGAAGATTAAAGAAACA+AGG + chr8_4:4883816-4883835 None:intergenic 25.0%
! GAATATCTTTGATATGGTAA+GGG + chr8_4:4884023-4884042 None:intergenic 25.0%
! CATAAACACTTTCAATGATT+TGG - chr8_4:4884131-4884150 Msa1308590:CDS 25.0%
! TTAATTCAATGTGTTTAAGG+TGG - chr8_4:4884250-4884269 Msa1308590:CDS 25.0%
!! TCTGTTCTTTATGTATGTTT+TGG - chr8_4:4884294-4884313 Msa1308590:CDS 25.0%
!! CTGTTCTTTATGTATGTTTT+GGG - chr8_4:4884295-4884314 Msa1308590:CDS 25.0%
AGAGTGAGATAAAATGATGT+TGG + chr8_4:4883916-4883935 None:intergenic 30.0%
GGAATATCTTTGATATGGTA+AGG + chr8_4:4884024-4884043 None:intergenic 30.0%
GATCAGGAATATCTTTGATA+TGG + chr8_4:4884029-4884048 None:intergenic 30.0%
!!! AAACCTTGTTTTTATCCAGT+GGG - chr8_4:4884189-4884208 Msa1308590:CDS 30.0%
ATTAGACTCATTTCTGTTGA+GGG + chr8_4:4884217-4884236 None:intergenic 30.0%
AATTAGACTCATTTCTGTTG+AGG + chr8_4:4884218-4884237 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG + chr8_4:4884291-4884310 None:intergenic 30.0%
TGAGTGGTAAAAAGTTCTTA+TGG - chr8_4:4884373-4884392 Msa1308590:CDS 30.0%
GAGTGGTAAAAAGTTCTTAT+GGG - chr8_4:4884374-4884393 Msa1308590:CDS 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG - chr8_4:4884420-4884439 Msa1308590:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG + chr8_4:4884459-4884478 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG - chr8_4:4884464-4884483 Msa1308590:CDS 30.0%
TTGGAAAGACACAAAGAAAA+TGG - chr8_4:4884483-4884502 Msa1308590:CDS 30.0%
AAGACACAAAGAAAATGGAT+TGG - chr8_4:4884488-4884507 Msa1308590:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG - chr8_4:4884566-4884585 Msa1308590:CDS 30.0%
CAAAGATAGATGATGAAAGT+GGG - chr8_4:4884703-4884722 Msa1308590:CDS 30.0%
GGAAATACAAAAGAGAATCA+AGG - chr8_4:4884788-4884807 Msa1308590:intron 30.0%
TGAAAATGGTTCATCTAAGA+AGG - chr8_4:4884842-4884861 Msa1308590:intron 30.0%
AGAGTGAGATAAAATGATGT+TGG + chr8_4:4883916-4883935 None:intergenic 30.0%
GGAATATCTTTGATATGGTA+AGG + chr8_4:4884024-4884043 None:intergenic 30.0%
GATCAGGAATATCTTTGATA+TGG + chr8_4:4884029-4884048 None:intergenic 30.0%
!!! AAACCTTGTTTTTATCCAGT+GGG - chr8_4:4884189-4884208 Msa1308590:CDS 30.0%
ATTAGACTCATTTCTGTTGA+GGG + chr8_4:4884217-4884236 None:intergenic 30.0%
AATTAGACTCATTTCTGTTG+AGG + chr8_4:4884218-4884237 None:intergenic 30.0%
CATACATAAAGAACAGAACT+TGG + chr8_4:4884291-4884310 None:intergenic 30.0%
TGAGTGGTAAAAAGTTCTTA+TGG - chr8_4:4884373-4884392 Msa1308590:CDS 30.0%
GAGTGGTAAAAAGTTCTTAT+GGG - chr8_4:4884374-4884393 Msa1308590:CDS 30.0%
!!! GTTAACTCTGCTTATTTTGT+TGG - chr8_4:4884420-4884439 Msa1308590:CDS 30.0%
CCATTTGGTAAATACTCTAA+CGG + chr8_4:4884459-4884478 None:intergenic 30.0%
GTATTTACCAAATGGTTTCT+TGG - chr8_4:4884464-4884483 Msa1308590:CDS 30.0%
TTGGAAAGACACAAAGAAAA+TGG - chr8_4:4884483-4884502 Msa1308590:CDS 30.0%
AAGACACAAAGAAAATGGAT+TGG - chr8_4:4884488-4884507 Msa1308590:CDS 30.0%
!!! TTTTTTGAGTCATTGTGGTT+GGG - chr8_4:4884566-4884585 Msa1308590:CDS 30.0%
CAAAGATAGATGATGAAAGT+GGG - chr8_4:4884703-4884722 Msa1308590:CDS 30.0%
GGAAATACAAAAGAGAATCA+AGG - chr8_4:4884788-4884807 Msa1308590:intron 30.0%
TGAAAATGGTTCATCTAAGA+AGG - chr8_4:4884842-4884861 Msa1308590:intron 30.0%
! TCTTATCTTTTCTATGCCTC+AGG - chr8_4:4883883-4883902 Msa1308590:CDS 35.0%
! TTCTAAGAACTCTATTTCCG+AGG + chr8_4:4883962-4883981 None:intergenic 35.0%
TATGAAACTGTGAATGTTCC+AGG - chr8_4:4883988-4884007 Msa1308590:CDS 35.0%
CTTGATCTTTCACATAGAAG+TGG + chr8_4:4884051-4884070 None:intergenic 35.0%
! TTTCAATGATTTGGAACCTG+AGG - chr8_4:4884140-4884159 Msa1308590:CDS 35.0%
! ATTTGGAACCTGAGGTTATA+AGG - chr8_4:4884148-4884167 Msa1308590:CDS 35.0%
!!! GAAACCTTGTTTTTATCCAG+TGG - chr8_4:4884188-4884207 Msa1308590:CDS 35.0%
TTAGACTCATTTCTGTTGAG+GGG + chr8_4:4884216-4884235 None:intergenic 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG - chr8_4:4884254-4884273 Msa1308590:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG + chr8_4:4884288-4884307 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG - chr8_4:4884300-4884319 Msa1308590:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG - chr8_4:4884342-4884361 Msa1308590:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG - chr8_4:4884357-4884376 Msa1308590:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG - chr8_4:4884456-4884475 Msa1308590:CDS 35.0%
TGTCTTTCCAAGAAACCATT+TGG + chr8_4:4884474-4884493 None:intergenic 35.0%
ATTCTTGGTCATGGTTCAAT+TGG - chr8_4:4884540-4884559 Msa1308590:CDS 35.0%
!!! GGTTGTTTTTTGAGTCATTG+TGG - chr8_4:4884561-4884580 Msa1308590:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG - chr8_4:4884565-4884584 Msa1308590:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG - chr8_4:4884567-4884586 Msa1308590:CDS 35.0%
ATCCTTTGTTCTGCAAATAG+AGG + chr8_4:4884639-4884658 None:intergenic 35.0%
ATTATTGACAGATGAGCTCA+AGG - chr8_4:4884668-4884687 Msa1308590:CDS 35.0%
CCACTTTCATCATCTATCTT+TGG + chr8_4:4884705-4884724 None:intergenic 35.0%
CCAAAGATAGATGATGAAAG+TGG - chr8_4:4884702-4884721 Msa1308590:CDS 35.0%
AAGAAGTTGCTAACTGTGTA+AGG - chr8_4:4884739-4884758 Msa1308590:intron 35.0%
AGAATCAAGGAATTGAGTGT+TGG - chr8_4:4884801-4884820 Msa1308590:intron 35.0%
! TCTTATCTTTTCTATGCCTC+AGG - chr8_4:4883883-4883902 Msa1308590:CDS 35.0%
! TTCTAAGAACTCTATTTCCG+AGG + chr8_4:4883962-4883981 None:intergenic 35.0%
TATGAAACTGTGAATGTTCC+AGG - chr8_4:4883988-4884007 Msa1308590:CDS 35.0%
CTTGATCTTTCACATAGAAG+TGG + chr8_4:4884051-4884070 None:intergenic 35.0%
! TTTCAATGATTTGGAACCTG+AGG - chr8_4:4884140-4884159 Msa1308590:CDS 35.0%
! ATTTGGAACCTGAGGTTATA+AGG - chr8_4:4884148-4884167 Msa1308590:CDS 35.0%
!!! GAAACCTTGTTTTTATCCAG+TGG - chr8_4:4884188-4884207 Msa1308590:CDS 35.0%
TTAGACTCATTTCTGTTGAG+GGG + chr8_4:4884216-4884235 None:intergenic 35.0%
! TTCAATGTGTTTAAGGTGGT+TGG - chr8_4:4884254-4884273 Msa1308590:CDS 35.0%
ACATAAAGAACAGAACTTGG+TGG + chr8_4:4884288-4884307 None:intergenic 35.0%
!!! CTTTATGTATGTTTTGGGAG+TGG - chr8_4:4884300-4884319 Msa1308590:CDS 35.0%
CAACTCAATGAGTTAGCATT+TGG - chr8_4:4884342-4884361 Msa1308590:CDS 35.0%
! GCATTTGGATTAGAATTGAG+TGG - chr8_4:4884357-4884376 Msa1308590:CDS 35.0%
! CCGTTAGAGTATTTACCAAA+TGG - chr8_4:4884456-4884475 Msa1308590:CDS 35.0%
TGTCTTTCCAAGAAACCATT+TGG + chr8_4:4884474-4884493 None:intergenic 35.0%
ATTCTTGGTCATGGTTCAAT+TGG - chr8_4:4884540-4884559 Msa1308590:CDS 35.0%
!!! GGTTGTTTTTTGAGTCATTG+TGG - chr8_4:4884561-4884580 Msa1308590:CDS 35.0%
!!! GTTTTTTGAGTCATTGTGGT+TGG - chr8_4:4884565-4884584 Msa1308590:CDS 35.0%
!!! TTTTTGAGTCATTGTGGTTG+GGG - chr8_4:4884567-4884586 Msa1308590:CDS 35.0%
ATCCTTTGTTCTGCAAATAG+AGG + chr8_4:4884639-4884658 None:intergenic 35.0%
ATTATTGACAGATGAGCTCA+AGG - chr8_4:4884668-4884687 Msa1308590:CDS 35.0%
CCACTTTCATCATCTATCTT+TGG + chr8_4:4884705-4884724 None:intergenic 35.0%
CCAAAGATAGATGATGAAAG+TGG - chr8_4:4884702-4884721 Msa1308590:CDS 35.0%
AAGAAGTTGCTAACTGTGTA+AGG - chr8_4:4884739-4884758 Msa1308590:intron 35.0%
AGAATCAAGGAATTGAGTGT+TGG - chr8_4:4884801-4884820 Msa1308590:intron 35.0%
GAAATAGAGTCGTCGAGATA+CGG + chr8_4:4883940-4883959 None:intergenic 40.0%
CTTTCACATAGAAGTGGATC+AGG + chr8_4:4884045-4884064 None:intergenic 40.0%
! TGAAGAAGCCTTATAACCTC+AGG + chr8_4:4884159-4884178 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG - chr8_4:4884303-4884322 Msa1308590:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG + chr8_4:4884411-4884430 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG - chr8_4:4884502-4884521 Msa1308590:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG - chr8_4:4884503-4884522 Msa1308590:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG + chr8_4:4884531-4884550 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr8_4:4884531-4884550 Msa1308590:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG - chr8_4:4884594-4884613 Msa1308590:CDS 40.0%
TAACTGTGTAAGGAGAACCA+TGG - chr8_4:4884749-4884768 Msa1308590:intron 40.0%
GCTGTTGCAACAAGTGAAAA+TGG - chr8_4:4884828-4884847 Msa1308590:intron 40.0%
ATCTCGATGCTAAAGAAGAG+AGG + chr8_4:4884870-4884889 None:intergenic 40.0%
GAAATAGAGTCGTCGAGATA+CGG + chr8_4:4883940-4883959 None:intergenic 40.0%
CTTTCACATAGAAGTGGATC+AGG + chr8_4:4884045-4884064 None:intergenic 40.0%
! TGAAGAAGCCTTATAACCTC+AGG + chr8_4:4884159-4884178 None:intergenic 40.0%
!!! TATGTATGTTTTGGGAGTGG+TGG - chr8_4:4884303-4884322 Msa1308590:CDS 40.0%
GCAGAGTTAACAGCTTTACT+TGG + chr8_4:4884411-4884430 None:intergenic 40.0%
!! ATGGATTGGTTGTTCCATCA+TGG - chr8_4:4884502-4884521 Msa1308590:CDS 40.0%
!! TGGATTGGTTGTTCCATCAT+GGG - chr8_4:4884503-4884522 Msa1308590:CDS 40.0%
TGACCAAGAATCTCAACTTG+TGG + chr8_4:4884531-4884550 None:intergenic 40.0%
! CAAGTTGAGATTCTTGGTCA+TGG - chr8_4:4884531-4884550 Msa1308590:CDS 40.0%
! ACTTTGGAGAGTGTGGTTAA+TGG - chr8_4:4884594-4884613 Msa1308590:CDS 40.0%
TAACTGTGTAAGGAGAACCA+TGG - chr8_4:4884749-4884768 Msa1308590:intron 40.0%
GCTGTTGCAACAAGTGAAAA+TGG - chr8_4:4884828-4884847 Msa1308590:intron 40.0%
ATCTCGATGCTAAAGAAGAG+AGG + chr8_4:4884870-4884889 None:intergenic 40.0%
TGATGTTGGAACAACTCCTG+AGG + chr8_4:4883902-4883921 None:intergenic 45.0%
TCTCGACGACTCTATTTCCT+CGG - chr8_4:4883942-4883961 Msa1308590:CDS 45.0%
TGGTAAGGGACTATACTACC+TGG + chr8_4:4884009-4884028 None:intergenic 45.0%
GGTCCCACTGGATAAAAACA+AGG + chr8_4:4884195-4884214 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG - chr8_4:4884525-4884544 Msa1308590:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG - chr8_4:4884578-4884597 Msa1308590:CDS 45.0%
ATGGTGTTCCTATGATTGCG+TGG - chr8_4:4884613-4884632 Msa1308590:CDS 45.0%
AATAGAGGCCACGCAATCAT+AGG + chr8_4:4884624-4884643 None:intergenic 45.0%
GGCCTCTATTTGCAGAACAA+AGG - chr8_4:4884634-4884653 Msa1308590:CDS 45.0%
ATTGACAGATGAGCTCAAGG+TGG - chr8_4:4884671-4884690 Msa1308590:CDS 45.0%
TGTGTAAGGAGAACCATGGA+AGG - chr8_4:4884753-4884772 Msa1308590:intron 45.0%
CAAGCTTTCATCACCTTCCA+TGG + chr8_4:4884769-4884788 None:intergenic 45.0%
CATGGAAGGTGATGAAAGCT+TGG - chr8_4:4884767-4884786 Msa1308590:intron 45.0%
TGATGTTGGAACAACTCCTG+AGG + chr8_4:4883902-4883921 None:intergenic 45.0%
TCTCGACGACTCTATTTCCT+CGG - chr8_4:4883942-4883961 Msa1308590:CDS 45.0%
TGGTAAGGGACTATACTACC+TGG + chr8_4:4884009-4884028 None:intergenic 45.0%
GGTCCCACTGGATAAAAACA+AGG + chr8_4:4884195-4884214 None:intergenic 45.0%
! GCACCACAAGTTGAGATTCT+TGG - chr8_4:4884525-4884544 Msa1308590:CDS 45.0%
TTGTGGTTGGGGTTCAACTT+TGG - chr8_4:4884578-4884597 Msa1308590:CDS 45.0%
ATGGTGTTCCTATGATTGCG+TGG - chr8_4:4884613-4884632 Msa1308590:CDS 45.0%
AATAGAGGCCACGCAATCAT+AGG + chr8_4:4884624-4884643 None:intergenic 45.0%
GGCCTCTATTTGCAGAACAA+AGG - chr8_4:4884634-4884653 Msa1308590:CDS 45.0%
ATTGACAGATGAGCTCAAGG+TGG - chr8_4:4884671-4884690 Msa1308590:CDS 45.0%
TGTGTAAGGAGAACCATGGA+AGG - chr8_4:4884753-4884772 Msa1308590:intron 45.0%
CAAGCTTTCATCACCTTCCA+TGG + chr8_4:4884769-4884788 None:intergenic 45.0%
CATGGAAGGTGATGAAAGCT+TGG - chr8_4:4884767-4884786 Msa1308590:intron 45.0%
TCAACTTGTGGTGCCCATGA+TGG + chr8_4:4884519-4884538 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG - chr8_4:4884587-4884606 Msa1308590:CDS 50.0%
TCAACTTGTGGTGCCCATGA+TGG + chr8_4:4884519-4884538 None:intergenic 50.0%
! GGGTTCAACTTTGGAGAGTG+TGG - chr8_4:4884587-4884606 Msa1308590:CDS 50.0%
TTTCTGTTGAGGGGTCCCAC+TGG + chr8_4:4884207-4884226 None:intergenic 55.0%
ATGAGCTCAAGGTGGCTGTG+AGG - chr8_4:4884679-4884698 Msa1308590:CDS 55.0%
TTTCTGTTGAGGGGTCCCAC+TGG + chr8_4:4884207-4884226 None:intergenic 55.0%
ATGAGCTCAAGGTGGCTGTG+AGG - chr8_4:4884679-4884698 Msa1308590:CDS 55.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 4883693 4884896 4883693 ID=Msa1308590;Name=Msa1308590
chr8_4 mRNA 4883693 4884896 4883693 ID=Msa1308590-mRNA-1;Parent=Msa1308590;Name=Msa1308590-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|2|0|370
chr8_4 exon 4884847 4884896 4884847 ID=Msa1308590-mRNA-1:exon:1527;Parent=Msa1308590-mRNA-1
chr8_4 exon 4883693 4884755 4883693 ID=Msa1308590-mRNA-1:exon:1526;Parent=Msa1308590-mRNA-1
chr8_4 CDS 4884847 4884896 4884847 ID=Msa1308590-mRNA-1:cds;Parent=Msa1308590-mRNA-1
chr8_4 CDS 4883693 4884755 4883693 ID=Msa1308590-mRNA-1:cds;Parent=Msa1308590-mRNA-1
Gene Sequence

>Msa1308590

ATGAAACTCATTGTCAAACATTCTATTCCATTTCTTCAAGAACAAGTTAATATATTTTCAACAGATGCATATGAAGTTGCTAAACAGTTCAACTTGTCTTCTTATCTTTTCTATGCCTCAGGAGTTGTTCCAACATCATTTTATCTCACTCTTCCGTATCTCGACGACTCTATTTCCTCGGAAATAGAGTTCTTAGAATCAGCTTATGAAACTGTGAATGTTCCAGGTAGTATAGTCCCTTACCATATCAAAGATATTCCTGATCCACTTCTATGTGAAAGATCAAGTTTAGAATACAAATCATTTCTTGATGTATGTCAAAAATTCTCATTAGTTAATGGTCTTATCATAAACACTTTCAATGATTTGGAACCTGAGGTTATAAGGCTTCTTCAAGAAAAAGAGAAACCTTGTTTTTATCCAGTGGGACCCCTCAACAGAAATGAGTCTAATTGTGAAGATAACATTAATTCAATGTGTTTAAGGTGGTTGGAAAATCAACCACCAAGTTCTGTTCTTTATGTATGTTTTGGGAGTGGTGGAACAGTTTCTCATGAACAACTCAATGAGTTAGCATTTGGATTAGAATTGAGTGGTAAAAAGTTCTTATGGGTTGTTAGAGTTCCAAGTAAAGCTGTTAACTCTGCTTATTTTGTTGGAGCAAAAGATGATCCGTTAGAGTATTTACCAAATGGTTTCTTGGAAAGACACAAAGAAAATGGATTGGTTGTTCCATCATGGGCACCACAAGTTGAGATTCTTGGTCATGGTTCAATTGGTTGTTTTTTGAGTCATTGTGGTTGGGGTTCAACTTTGGAGAGTGTGGTTAATGGTGTTCCTATGATTGCGTGGCCTCTATTTGCAGAACAAAGGATGAATGCAAAATTATTGACAGATGAGCTCAAGGTGGCTGTGAGGCCAAAGATAGATGATGAAAGTGGGATAGTGAAAAGAGAAGAAGTTGCTAACTGTGTAAGGAGAACCATGGAAGGTGATGAAAGCTTGGAAATACAAAAGAGAATCAAGGAATTGAGTGTTGGTGCTGCTGTTGCAACAAGTGAAAATGGTTCATCTAAGAAGGCACCTCTCTTCTTTAGCATCGAGATTGCATAA
Protein sequence

>Msa1308590

MKLIVKHSIPFLQEQVNIFSTDAYEVAKQFNLSSYLFYASGVVPTSFYLTLPYLDDSISSEIEFLESAYETVNVPGSIVPYHIKDIPDPLLCERSSLEYKSFLDVCQKFSLVNGLIINTFNDLEPEVIRLLQEKEKPCFYPVGPLNRNESNCEDNINSMCLRWLENQPPSSVLYVCFGSGGTVSHEQLNELAFGLELSGKKFLWVVRVPSKAVNSAYFVGAKDDPLEYLPNGFLERHKENGLVVPSWAPQVEILGHGSIGCFLSHCGWGSTLESVVNGVPMIAWPLFAEQRMNAKLLTDELKVAVRPKIDDESGIVKREEVANCVRRTMEGDESLEIQKRIKELSVGAAVATSENGSSKKAPLFFSIEIA*