AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0708860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708860 MtrunA17_Chr7g0271791 92.222 180 13 1 78 256 3 182 4.31e-117 333
Msa0708860 MtrunA17_Chr7g0271781 81.215 181 34 0 78 258 28 208 5.05e-107 308
Msa0708860 MtrunA17_Chr1g0192771 73.016 126 34 0 79 204 27 152 9.77e-62 193
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0708860 AT1G56423.1 65.385 182 63 0 79 260 25 206 1.07e-82 249
Msa0708860 AT1G56423.2 65.385 182 63 0 79 260 25 206 1.17e-82 248

Find 135 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAGTTTGTTGTTAATAAT+TGG 0.109210 4_4:+82630060 Msa0708860:five_prime_UTR
ATTATTAAATTGCTTTGATA+TGG 0.171309 4_4:+82630919 Msa0708860:five_prime_UTR
ATTCTTAAATTGCTTTGATA+TGG 0.173199 4_4:+82636251 Msa0708860:CDS
GAATGTAAACTTCCCACTTT+TGG 0.197293 4_4:-82636232 None:intergenic
TAATGTAAACTTCCCACTTT+TGG 0.220946 4_4:-82630900 None:intergenic
AATATGTTACTTAAATTCTT+AGG 0.228883 4_4:+82636884 Msa0708860:three_prime_UTR
ATGCTCTATGATGTTGTTAA+TGG 0.239286 4_4:+82636690 Msa0708860:CDS
CCTTTACAGAGGGATTTCTT+AGG 0.255096 4_4:+82636547 Msa0708860:CDS
AAATGCACCACAATTGAAAA+TGG 0.277979 4_4:-82629926 None:intergenic
TCTTAGGTGCTTTAGAGTTT+TGG 0.284986 4_4:+82636900 Msa0708860:three_prime_UTR
TGTGATGCGGTTGGCCTTAC+GGG 0.286048 4_4:-82631137 None:intergenic
GAGCAAAGACTTGGAAGATT+TGG 0.287178 4_4:+82636615 Msa0708860:CDS
CCTCTAGAGCTGTCATAAAT+AGG 0.294176 4_4:-82631485 None:intergenic
CTCGACCATGAAAAGGGATT+TGG 0.302829 4_4:-82629900 None:intergenic
AGAGGAACTGGTACGTTGTT+TGG 0.307326 4_4:+82631235 Msa0708860:five_prime_UTR
TCATCGAATGCTTCTACAAT+AGG 0.310825 4_4:-82630026 None:intergenic
CGTAAGGCCAACCGCGTTAT+AGG 0.315393 4_4:+82636471 Msa0708860:CDS
GAGCAAAGGCTTGGAAGATT+TGG 0.325168 4_4:+82631283 Msa0708860:five_prime_UTR
AGGCGCGAAAGCGATGAAAT+TGG 0.347812 4_4:+82636443 Msa0708860:CDS
CTGTGATGCGGTTGGCCTTA+CGG 0.349279 4_4:-82631138 None:intergenic
TGAGTTTGTTGTTAATAATT+GGG 0.352915 4_4:+82630061 Msa0708860:five_prime_UTR
TTCTTAAATTGCTTTGATAT+GGG 0.354427 4_4:+82636252 Msa0708860:CDS
AGGGGAACTAGTACTTTGTT+TGG 0.354854 4_4:+82636567 Msa0708860:CDS
AGAAGAAGAAGAAAAGAGAT+TGG 0.356224 4_4:+82634585 Msa0708860:CDS
AACTTATAGTGGAGGCTTCA+TGG 0.360821 4_4:+82636590 Msa0708860:CDS
AACTTACGGTGTAGGTTTCA+TGG 0.367784 4_4:+82631258 Msa0708860:five_prime_UTR
TTATTAAATTGCTTTGATAT+GGG 0.378126 4_4:+82630920 Msa0708860:five_prime_UTR
GGAAGATTTGGTTATCTTGT+TGG 0.384207 4_4:+82636627 Msa0708860:CDS
CTTTACAGAGGGATTTCTTA+GGG 0.384398 4_4:+82636548 Msa0708860:CDS
GGAAGATTTGGTTATCTTGT+TGG 0.387002 4_4:+82631295 Msa0708860:five_prime_UTR
AATTGCTTTGATATGGGCTC+TGG 0.391768 4_4:+82636258 Msa0708860:CDS
TTATCTTGTTGGAAGTCAAT+TGG 0.396840 4_4:+82631306 Msa0708860:five_prime_UTR
TTATCTTGTTGGAAGTCAAT+TGG 0.396840 4_4:+82636638 Msa0708860:CDS
TTGGAAGTCAATTGGGAAGT+TGG 0.398362 4_4:+82631314 Msa0708860:five_prime_UTR
ACTTTGTTTGGAACTTATAG+TGG 0.399086 4_4:+82636579 Msa0708860:CDS
GGTTGAATACCGATTCGTTA+TGG 0.399909 4_4:+82636921 Msa0708860:three_prime_UTR
ATAGGTCCGATTATCTCTTT+CGG 0.405365 4_4:+82636489 Msa0708860:CDS
GTCATCAACTAAAATTAGTT+AGG 0.406042 4_4:-82636818 None:intergenic
AGTTGGATTGGAAGTAGAAT+AGG 0.408974 4_4:+82631331 Msa0708860:five_prime_UTR
TCTTGTTGATGCTGCTTCAC+AGG 0.412869 4_4:+82631048 Msa0708860:five_prime_UTR
TTGGAAGTCAATTGGGAAGT+TGG 0.412963 4_4:+82636646 Msa0708860:CDS
TGGAAGTCAATTGGGAAGTT+GGG 0.414564 4_4:+82636647 Msa0708860:CDS
GACCCATCCATATACAAAAC+TGG 0.418467 4_4:-82631642 None:intergenic
ACTCACAAATAAATTAAGAT+TGG 0.422507 4_4:-82636851 None:intergenic
TCTTGTCTATGCTGCTTCAA+AGG 0.425859 4_4:+82636380 Msa0708860:CDS
CTTCTTCTTCTGGAAATCCA+TGG 0.432031 4_4:-82634567 None:intergenic
TACACATTTGGAGGTAGAAT+AGG 0.432850 4_4:+82636742 Msa0708860:exon
AAGAATACATCATCCAAAAG+TGG 0.436749 4_4:+82636219 Msa0708860:CDS
AGTCAATTGGGAAGTTGGGT+TGG 0.437136 4_4:+82636651 Msa0708860:CDS
AATTGCTTTGATATGGGCTC+AGG 0.437174 4_4:+82630926 Msa0708860:five_prime_UTR
GTGCATTTCGTGTTGCAGTA+TGG 0.438736 4_4:+82631382 Msa0708860:five_prime_UTR
AGTTGGGTTGGAGGTAGAAT+AGG 0.439552 4_4:+82636663 Msa0708860:CDS
TATCTTGTTGGAAGTCAATT+GGG 0.442064 4_4:+82631307 Msa0708860:five_prime_UTR
TATCTTGTTGGAAGTCAATT+GGG 0.442064 4_4:+82636639 Msa0708860:CDS
GAGGGATTCCTCAGAGGAAC+TGG 0.444285 4_4:+82631223 Msa0708860:five_prime_UTR
GGTACGTTGTTTGGAACTTA+CGG 0.445217 4_4:+82631244 Msa0708860:five_prime_UTR
TATTCATAATCTACAAAGAA+TGG 0.445916 4_4:-82631510 None:intergenic
CAATTGGGAAGTTGGGTTGG+AGG 0.449810 4_4:+82636654 Msa0708860:CDS
AGTCAATTGGGAAGTTGGAT+TGG 0.450366 4_4:+82631319 Msa0708860:five_prime_UTR
ATTATGAATATATCTATTAA+CGG 0.452424 4_4:+82631523 Msa0708860:exon
CATCGAATGCTTCTACAATA+GGG 0.454519 4_4:-82630025 None:intergenic
AGTTTGTTCAACTACACATT+TGG 0.454877 4_4:+82636730 Msa0708860:CDS
TGTCATAAATAGGAATTTCA+TGG 0.455133 4_4:-82631475 None:intergenic
ATGGACTCTCGACCATGAAA+AGG 0.458378 4_4:-82629907 None:intergenic
CTTGTCTATGCTGCTTCAAA+GGG 0.458661 4_4:+82636381 Msa0708860:CDS
GTCCCATCCGGAAGAGATGA+TGG 0.461346 4_4:-82631164 None:intergenic
ATGGTATATGATGTGGCTAA+TGG 0.468429 4_4:+82631358 Msa0708860:five_prime_UTR
GGCTCTGGAACTTTAGCATG+TGG 0.478809 4_4:+82636273 Msa0708860:CDS
AAGAATCCCTCTCACGAGAA+AGG 0.480196 4_4:-82629971 None:intergenic
TTTGAAGCTGTTTACTATGG+TGG 0.481190 4_4:+82631190 Msa0708860:five_prime_UTR
TCCCATCCGAAAGAGATAAT+CGG 0.484362 4_4:-82636495 None:intergenic
GTTTCTTCCATTCCATGCCA+TGG 0.486159 4_4:+82630101 Msa0708860:five_prime_UTR
CAATGATGGCAGATACAGAT+AGG 0.486572 4_4:-82630152 None:intergenic
AGAATCCCTCTCACGAGAAA+GGG 0.494223 4_4:-82629970 None:intergenic
ACTTATAGTGGAGGCTTCAT+GGG 0.496617 4_4:+82636591 Msa0708860:CDS
GAGAACGCGTCATCCAAAAG+TGG 0.497930 4_4:+82630887 Msa0708860:five_prime_UTR
GTTGGATTGGAAGTAGAATA+GGG 0.502946 4_4:+82631332 Msa0708860:five_prime_UTR
ACAGGTCCCATCATCTCTTC+CGG 0.504313 4_4:+82631157 Msa0708860:five_prime_UTR
TTGTTCAACTACACATTTGG+AGG 0.508117 4_4:+82636733 Msa0708860:CDS
CTATCTCCCTTTCTCGTGAG+AGG 0.508533 4_4:+82629964 Msa0708860:five_prime_UTR
ATCATTGTTCTTAGCATCAC+AGG 0.509850 4_4:+82630168 Msa0708860:five_prime_UTR
CTTGTTGATGCTGCTTCACA+GGG 0.511056 4_4:+82631049 Msa0708860:five_prime_UTR
TATCTCCCTTTCTCGTGAGA+GGG 0.512986 4_4:+82629965 Msa0708860:five_prime_UTR
GTCCGATTATCTCTTTCGGA+TGG 0.513295 4_4:+82636493 Msa0708860:CDS
CAGCATCAACAAGAGCAGAT+TGG 0.514551 4_4:-82631039 None:intergenic
CCTAAGAAATCCCTCTGTAA+AGG 0.515158 4_4:-82636547 None:intergenic
CTCTGGAACTTTAGCATGTG+GGG 0.515253 4_4:+82636275 Msa0708860:CDS
GAATGGAAGAAACAGTTAAA+CGG 0.515918 4_4:-82630091 None:intergenic
AACTTTAGCATGTGGGGTCA+AGG 0.516673 4_4:+82636281 Msa0708860:CDS
CCTATTTATGACAGCTCTAG+AGG 0.524126 4_4:+82631485 Msa0708860:five_prime_UTR
TGGACTCTCGACCATGAAAA+GGG 0.525887 4_4:-82629906 None:intergenic
TTGTTTGGAACTTACGGTGT+AGG 0.526991 4_4:+82631250 Msa0708860:five_prime_UTR
CAGCATAGACAAGAGCAGAT+AGG 0.527261 4_4:-82636371 None:intergenic
TGAAAATCCATGGCATGGAA+TGG 0.527417 4_4:-82630108 None:intergenic
CGTAAGGCCAACCGCATCAC+AGG 0.530423 4_4:+82631139 Msa0708860:five_prime_UTR
ACTTACGGTGTAGGTTTCAT+GGG 0.535716 4_4:+82631259 Msa0708860:five_prime_UTR
TCCCATCATCTCTTCCGGAT+GGG 0.537093 4_4:+82631162 Msa0708860:five_prime_UTR
GGCGAAATTGGCTACCCGTA+AGG 0.540905 4_4:+82631123 Msa0708860:five_prime_UTR
TCCGATTATCTCTTTCGGAT+GGG 0.540973 4_4:+82636494 Msa0708860:CDS
GCTCTGGAACTTTAGCATGT+GGG 0.541033 4_4:+82636274 Msa0708860:CDS
GATGAAATTGGCTACTCGTA+AGG 0.541060 4_4:+82636455 Msa0708860:CDS
GGCTCAGGAACGCTAGCATG+TGG 0.544815 4_4:+82630941 Msa0708860:five_prime_UTR
TAAATAGGAATTTCATGGAA+AGG 0.552173 4_4:-82631470 None:intergenic
GTCCCATCATCTCTTCCGGA+TGG 0.557344 4_4:+82631161 Msa0708860:five_prime_UTR
TCTGAGGAATCCCTCTGTAA+AGG 0.559119 4_4:-82631215 None:intergenic
TTTGAAGCTGTTTACCATGG+TGG 0.562710 4_4:+82636522 Msa0708860:CDS
AGAATACATCATCCAAAAGT+GGG 0.563236 4_4:+82636220 Msa0708860:CDS
TCTTCTGAAAATCCATGGCA+TGG 0.563833 4_4:-82630113 None:intergenic
CTCAGGAACGCTAGCATGTG+GGG 0.570098 4_4:+82630943 Msa0708860:five_prime_UTR
TTCATGGGAGAGCAAAGACT+TGG 0.572021 4_4:+82636606 Msa0708860:CDS
TTGTTTGGAACTTATAGTGG+AGG 0.574644 4_4:+82636582 Msa0708860:CDS
TCTTCTGGAAATCCATGGCA+TGG 0.575380 4_4:-82634562 None:intergenic
TGGAAGTAGAATAGGGCTCA+TGG 0.576358 4_4:+82631339 Msa0708860:five_prime_UTR
CATGGTGGTACCTTTACAGA+GGG 0.580979 4_4:+82636537 Msa0708860:CDS
TCTCCTCTTCTGAAAATCCA+TGG 0.583117 4_4:-82630118 None:intergenic
TATGGTGGTACCTTTACAGA+GGG 0.585211 4_4:+82631205 Msa0708860:five_prime_UTR
GCTCAGGAACGCTAGCATGT+GGG 0.607284 4_4:+82630942 Msa0708860:five_prime_UTR
AATCGGACCTATAACGCGGT+TGG 0.607623 4_4:-82636478 None:intergenic
TCCCATCCGGAAGAGATGAT+GGG 0.613844 4_4:-82631163 None:intergenic
TTTACAGAGGGATTTCTTAG+GGG 0.624566 4_4:+82636549 Msa0708860:CDS
TGTGATGCTAAGAACAATGA+TGG 0.627342 4_4:-82630166 None:intergenic
GATGGGACCTGTGATGCGGT+TGG 0.637538 4_4:-82631146 None:intergenic
AGAACGCGTCATCCAAAAGT+GGG 0.637848 4_4:+82630888 Msa0708860:five_prime_UTR
AGGGCTCATGGTATATGATG+TGG 0.638967 4_4:+82631351 Msa0708860:five_prime_UTR
GAAAAGGGATTTGGATTGTG+TGG 0.644574 4_4:-82629891 None:intergenic
CTATGGTGGTACCTTTACAG+AGG 0.649919 4_4:+82631204 Msa0708860:five_prime_UTR
CTTACGGTGTAGGTTTCATG+GGG 0.659609 4_4:+82631260 Msa0708860:five_prime_UTR
CCATGGTGGTACCTTTACAG+AGG 0.672858 4_4:+82636536 Msa0708860:CDS
TTTACAGAGGGATTCCTCAG+AGG 0.683356 4_4:+82631217 Msa0708860:five_prime_UTR
AAGGGATTTGGATTGTGTGG+CGG 0.699732 4_4:-82629888 None:intergenic
ACAACGTACCAGTTCCTCTG+AGG 0.700531 4_4:-82631231 None:intergenic
AGATGATGGGACCTGTGATG+CGG 0.719348 4_4:-82631150 None:intergenic
CCTCTGTAAAGGTACCACCA+TGG 0.761327 4_4:-82636536 None:intergenic
TTACGGTGTAGGTTTCATGG+GGG 0.787530 4_4:+82631261 Msa0708860:five_prime_UTR
AGATAATCGGACCTATAACG+CGG 0.794627 4_4:-82636482 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATTATAATTAATGAAAA+TGG - chr4_4:82630821-82630840 None:intergenic 10.0%
!! ATTATGAATATATCTATTAA+CGG + chr4_4:82631523-82631542 Msa0708860:exon 10.0%
!!! ATTTTATCATATATTTTTGT+AGG + chr4_4:82632668-82632687 Msa0708860:intron 10.0%
!! AAAGCAAATATAAAATAAAA+AGG - chr4_4:82633998-82634017 None:intergenic 10.0%
!! ATAAATTTACATTAAAAATG+GGG - chr4_4:82635083-82635102 None:intergenic 10.0%
!! CATAAATTTACATTAAAAAT+GGG - chr4_4:82635084-82635103 None:intergenic 10.0%
!! TCATAAATTTACATTAAAAA+TGG - chr4_4:82635085-82635104 None:intergenic 10.0%
!!! TTTATTTTATCTTTAGTTAT+AGG - chr4_4:82635369-82635388 None:intergenic 10.0%
!!! AAAAAAAGTGATTTTTATTA+TGG + chr4_4:82635825-82635844 Msa0708860:intron 10.0%
!! AGAAATTATAATTAATGAAA+TGG - chr4_4:82630822-82630841 None:intergenic 10.0%
!! ATTTGAATTTATCTATCTAA+TGG - chr4_4:82630688-82630707 None:intergenic 15.0%
!! ATTATTAAATTGCTTTGATA+TGG + chr4_4:82630919-82630938 Msa0708860:five_prime_UTR 15.0%
!! TTATTAAATTGCTTTGATAT+GGG + chr4_4:82630920-82630939 Msa0708860:five_prime_UTR 15.0%
!!! TTTTTTTATTTCAACATATG+TGG + chr4_4:82631770-82631789 Msa0708860:intron 15.0%
!!! TTTATTTTCTTTTTTGAGAA+AGG - chr4_4:82632975-82632994 None:intergenic 15.0%
!!! ATTTATTGCTGATTATAATT+AGG + chr4_4:82634514-82634533 Msa0708860:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr4_4:82634796-82634815 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr4_4:82634795-82634814 Msa0708860:intron 15.0%
!!! TAGTTTTAAAAGTAATACAT+TGG + chr4_4:82634819-82634838 Msa0708860:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr4_4:82634922-82634941 Msa0708860:intron 15.0%
!! AATTGATTAAGATTATAGTT+TGG + chr4_4:82635152-82635171 Msa0708860:intron 15.0%
!! CTTAAAAAAGTTATAACAAA+CGG - chr4_4:82635489-82635508 None:intergenic 15.0%
!!! AACAAATAATTTAGTTTGTT+TGG - chr4_4:82635804-82635823 None:intergenic 15.0%
!!! AATATGTTACTTAAATTCTT+AGG + chr4_4:82636884-82636903 Msa0708860:three_prime_UTR 15.0%
!!! ATGAGTTTGTTGTTAATAAT+TGG + chr4_4:82630060-82630079 Msa0708860:five_prime_UTR 20.0%
!!! TGAGTTTGTTGTTAATAATT+GGG + chr4_4:82630061-82630080 Msa0708860:five_prime_UTR 20.0%
!! GGTTCAAAAATAGTATTAAT+GGG - chr4_4:82630208-82630227 None:intergenic 20.0%
!! AGGTTCAAAAATAGTATTAA+TGG - chr4_4:82630209-82630228 None:intergenic 20.0%
!!! TAATTGTCTTTATAACGTTT+TGG + chr4_4:82630256-82630275 Msa0708860:intron 20.0%
!!! AATTGTCTTTATAACGTTTT+GGG + chr4_4:82630257-82630276 Msa0708860:intron 20.0%
!! TATTCATAATCTACAAAGAA+TGG - chr4_4:82631513-82631532 None:intergenic 20.0%
!! TGTGAAAAGAAAAACAATAT+TGG - chr4_4:82631578-82631597 None:intergenic 20.0%
!!! TTCTTTTCACATTATATGAT+TGG + chr4_4:82631587-82631606 Msa0708860:CDS 20.0%
!! TATGTTATCATACGATTTAT+AGG - chr4_4:82631743-82631762 None:intergenic 20.0%
!!! AAATTCGACAAGTTTTTAAA+TGG + chr4_4:82631800-82631819 Msa0708860:intron 20.0%
!! ATTTGGTTAAAAGATATATC+CGG + chr4_4:82631861-82631880 Msa0708860:intron 20.0%
!! TGTTAATAAAGTTCAATAGA+TGG - chr4_4:82631904-82631923 None:intergenic 20.0%
!! AAATGTATATGTGAAACATA+TGG + chr4_4:82631958-82631977 Msa0708860:intron 20.0%
!! TAGAAGAATAAAAAATGTTG+TGG + chr4_4:82632131-82632150 Msa0708860:intron 20.0%
!! ATGAATTAAAATCACAATGA+AGG + chr4_4:82632218-82632237 Msa0708860:intron 20.0%
!! TGAATTAAAATCACAATGAA+GGG + chr4_4:82632219-82632238 Msa0708860:intron 20.0%
!! TATGATAAAATTAAAGTGAC+TGG - chr4_4:82632659-82632678 None:intergenic 20.0%
!!! TTGAGTCTTTTTTATTTTAG+TGG + chr4_4:82632849-82632868 Msa0708860:intron 20.0%
!! ATTGCTTATACTTTGATTAT+CGG + chr4_4:82632927-82632946 Msa0708860:intron 20.0%
!!! TACTATTTTGATCAATAGAA+GGG - chr4_4:82633067-82633086 None:intergenic 20.0%
!!! TCGTTTTTTAAGTCAATAAT+TGG + chr4_4:82633143-82633162 Msa0708860:intron 20.0%
!! CAAATTTAAATTTACCTCAA+GGG + chr4_4:82633784-82633803 Msa0708860:intron 20.0%
!! TTAATTAATCTTTGACAAGA+GGG - chr4_4:82634491-82634510 None:intergenic 20.0%
!! ATTAATTAATCTTTGACAAG+AGG - chr4_4:82634492-82634511 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr4_4:82634805-82634824 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr4_4:82634882-82634901 Msa0708860:intron 20.0%
!! CACAAAAAGTTGTAAAAAAA+TGG - chr4_4:82635005-82635024 None:intergenic 20.0%
!!! TAAAAGTTTTTGACTATCTT+TGG + chr4_4:82635291-82635310 Msa0708860:intron 20.0%
!!! TTGTTATAGCTTTTCAAAAA+GGG + chr4_4:82635540-82635559 Msa0708860:intron 20.0%
!! TCAAAAAAGTTACCATTTAA+AGG - chr4_4:82635600-82635619 None:intergenic 20.0%
!! AATTTATGTAATTAGTGCAT+TGG + chr4_4:82635621-82635640 Msa0708860:intron 20.0%
!! AGAACTTATGAAAATGATTT+AGG - chr4_4:82635955-82635974 None:intergenic 20.0%
!! ATTCTTAAATTGCTTTGATA+TGG + chr4_4:82636251-82636270 Msa0708860:CDS 20.0%
!! TTCTTAAATTGCTTTGATAT+GGG + chr4_4:82636252-82636271 Msa0708860:CDS 20.0%
!! ACTCACAAATAAATTAAGAT+TGG - chr4_4:82636854-82636873 None:intergenic 20.0%
!!! AAATTTTATCCATAACGAAT+CGG - chr4_4:82636933-82636952 None:intergenic 20.0%
! TCAATTAATGGCAGTAATTT+AGG + chr4_4:82630281-82630300 Msa0708860:intron 25.0%
! CAATTAATGGCAGTAATTTA+GGG + chr4_4:82630282-82630301 Msa0708860:intron 25.0%
! AATTAATGGCAGTAATTTAG+GGG + chr4_4:82630283-82630302 Msa0708860:intron 25.0%
!!! AATTTTTGGGGTCAATAATT+TGG - chr4_4:82630348-82630367 None:intergenic 25.0%
! AAATTATTGACCCCAAAAAT+TGG + chr4_4:82630347-82630366 Msa0708860:intron 25.0%
!! TTTCTTTTCTATTCTAGCAT+GGG + chr4_4:82630385-82630404 Msa0708860:intron 25.0%
!!! TTTTTTGAAGCTGTTTACTA+TGG + chr4_4:82631187-82631206 Msa0708860:five_prime_UTR 25.0%
! TAAATAGGAATTTCATGGAA+AGG - chr4_4:82631473-82631492 None:intergenic 25.0%
! TGTCATAAATAGGAATTTCA+TGG - chr4_4:82631478-82631497 None:intergenic 25.0%
!! ATGTCTTCTCATTTTCTTAT+TGG + chr4_4:82631704-82631723 Msa0708860:intron 25.0%
!! TTTTCTTATTGGAAAACCTT+CGG + chr4_4:82631715-82631734 Msa0708860:intron 25.0%
!! GTTTAATGAAGTGTTTGATT+TGG + chr4_4:82631844-82631863 Msa0708860:intron 25.0%
! TATTAACAACACATTTGAAC+TGG + chr4_4:82631916-82631935 Msa0708860:intron 25.0%
! GAAGAAATCTCTTATAAGTT+TGG + chr4_4:82632013-82632032 Msa0708860:intron 25.0%
! TATGGTTCAACTTATAAGTT+TGG + chr4_4:82632039-82632058 Msa0708860:intron 25.0%
! ATTAATATCTTCATGCGATT+TGG + chr4_4:82632087-82632106 Msa0708860:intron 25.0%
! TTCTAAATAATCCAAACACA+AGG - chr4_4:82632116-82632135 None:intergenic 25.0%
!!! AAAATGTTGTGGTTTTTTGT+CGG + chr4_4:82632142-82632161 Msa0708860:intron 25.0%
! TATCATAAAACTTGTCAAAG+TGG - chr4_4:82632172-82632191 None:intergenic 25.0%
!! TCTTTCATTTTCTTCATTGA+GGG + chr4_4:82632368-82632387 Msa0708860:intron 25.0%
! TCGAAGTTAATAGCATATAA+CGG - chr4_4:82632701-82632720 None:intergenic 25.0%
!!! CTACTATTTTGATCAATAGA+AGG - chr4_4:82633068-82633087 None:intergenic 25.0%
!!! TTTTAAAATCTCATCTCGTT+CGG - chr4_4:82633107-82633126 None:intergenic 25.0%
!! AGCAAAATTCCCAAATTTTT+AGG - chr4_4:82633203-82633222 None:intergenic 25.0%
!!! TTTTTTCTTCTTTAGTCTCT+AGG + chr4_4:82633584-82633603 Msa0708860:intron 25.0%
!!! AAAAAGATTTTGGGAGTAAA+AGG - chr4_4:82633723-82633742 None:intergenic 25.0%
! CCTTGAGGTAAATTTAAATT+TGG - chr4_4:82633786-82633805 None:intergenic 25.0%
! CCAAATTTAAATTTACCTCA+AGG + chr4_4:82633783-82633802 Msa0708860:intron 25.0%
! AAAAGGAATGAACAAAATTG+AGG - chr4_4:82633981-82634000 None:intergenic 25.0%
! CAATGATTAAAAGAAAGAGA+CGG + chr4_4:82634761-82634780 Msa0708860:intron 25.0%
! AATGATTAAAAGAAAGAGAC+GGG + chr4_4:82634762-82634781 Msa0708860:intron 25.0%
! TAAAAGTAATACATTGGAAG+TGG + chr4_4:82634825-82634844 Msa0708860:intron 25.0%
!! GAATCTTTCTTTTTCTAACA+TGG + chr4_4:82635246-82635265 Msa0708860:intron 25.0%
!!! TTTTGAAAAGCTATAACAAG+CGG - chr4_4:82635539-82635558 None:intergenic 25.0%
!!! CTTGTTATAGCTTTTCAAAA+AGG + chr4_4:82635539-82635558 Msa0708860:intron 25.0%
!!! TACTCTTTAAGACCTTTAAA+TGG + chr4_4:82635585-82635604 Msa0708860:intron 25.0%
! AGTTAATCGAAATAGACATT+TGG + chr4_4:82636021-82636040 Msa0708860:intron 25.0%
! GTCATCAACTAAAATTAGTT+AGG - chr4_4:82636821-82636840 None:intergenic 25.0%
AAATGCACCACAATTGAAAA+TGG - chr4_4:82629929-82629948 None:intergenic 30.0%
GAATGGAAGAAACAGTTAAA+CGG - chr4_4:82630094-82630113 None:intergenic 30.0%
!!! AACGTTTTGGGTTCAATTAA+TGG + chr4_4:82630269-82630288 Msa0708860:intron 30.0%
TGAATAAGATAAACCTGATC+AGG - chr4_4:82630315-82630334 None:intergenic 30.0%
! CTTTCTTTTCTATTCTAGCA+TGG + chr4_4:82630384-82630403 Msa0708860:intron 30.0%
TATTGTTCCTTACATCAAAG+TGG + chr4_4:82630757-82630776 Msa0708860:intron 30.0%
TGGGTTCTCATATTTAACTA+TGG + chr4_4:82630792-82630811 Msa0708860:intron 30.0%
! TAATGTAAACTTCCCACTTT+TGG - chr4_4:82630903-82630922 None:intergenic 30.0%
TTATCTTGTTGGAAGTCAAT+TGG + chr4_4:82631306-82631325 Msa0708860:five_prime_UTR 30.0%
TATCTTGTTGGAAGTCAATT+GGG + chr4_4:82631307-82631326 Msa0708860:five_prime_UTR 30.0%
TCAAACACTTCATTAAACCA+TGG - chr4_4:82631842-82631861 None:intergenic 30.0%
GAACTGGATTAACAATGATT+TGG + chr4_4:82631932-82631951 Msa0708860:intron 30.0%
CTCTTATAAGTTTGGTCATA+TGG + chr4_4:82632021-82632040 Msa0708860:intron 30.0%
CTTATAAGTTTGGTATCTCA+AGG + chr4_4:82632049-82632068 Msa0708860:intron 30.0%
TTTGGTATCTCAAGGAAAAA+AGG + chr4_4:82632057-82632076 Msa0708860:intron 30.0%
! GATAGACAAAATGAAGCTTT+TGG + chr4_4:82632188-82632207 Msa0708860:intron 30.0%
!! ACAAAATGAAGCTTTTGGTT+TGG + chr4_4:82632193-82632212 Msa0708860:intron 30.0%
TGAAAGAGAAAACCTAAAGA+GGG - chr4_4:82632355-82632374 None:intergenic 30.0%
ATGAAAGAGAAAACCTAAAG+AGG - chr4_4:82632356-82632375 None:intergenic 30.0%
! CTCTTTCATTTTCTTCATTG+AGG + chr4_4:82632367-82632386 Msa0708860:intron 30.0%
! CTTTCATTTTCTTCATTGAG+GGG + chr4_4:82632369-82632388 Msa0708860:intron 30.0%
TAGAGAGAAAAAGATGAAGA+GGG - chr4_4:82632427-82632446 None:intergenic 30.0%
ATAGAGAGAAAAAGATGAAG+AGG - chr4_4:82632428-82632447 None:intergenic 30.0%
! AGTGATTTTCACATAGATCT+AGG + chr4_4:82632461-82632480 Msa0708860:intron 30.0%
TAAAGTGACTGGAATATCTA+TGG - chr4_4:82632648-82632667 None:intergenic 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG + chr4_4:82632742-82632761 Msa0708860:intron 30.0%
!! TTTTTGAGAAAGGCAAAAAC+TGG - chr4_4:82632965-82632984 None:intergenic 30.0%
! GGTATTTTCAGTTTTTCATG+GGG - chr4_4:82633046-82633065 None:intergenic 30.0%
! GGGTATTTTCAGTTTTTCAT+GGG - chr4_4:82633047-82633066 None:intergenic 30.0%
!! AGGGTATTTTCAGTTTTTCA+TGG - chr4_4:82633048-82633067 None:intergenic 30.0%
TCTCATCTATCAACGAAAAA+GGG - chr4_4:82633170-82633189 None:intergenic 30.0%
!!! CCCAAATTTTTAGGTTACAT+GGG - chr4_4:82633194-82633213 None:intergenic 30.0%
CCCATGTAACCTAAAAATTT+GGG + chr4_4:82633191-82633210 Msa0708860:intron 30.0%
!!! TCCCAAATTTTTAGGTTACA+TGG - chr4_4:82633195-82633214 None:intergenic 30.0%
!!! ACTGAAGAACAAACGTTTTT+TGG + chr4_4:82633394-82633413 Msa0708860:intron 30.0%
!!! AAGAACAAACGTTTTTTGGA+CGG + chr4_4:82633398-82633417 Msa0708860:intron 30.0%
AAGGTAGCTTAGCATTTAAT+GGG - chr4_4:82633486-82633505 None:intergenic 30.0%
TAAGGTAGCTTAGCATTTAA+TGG - chr4_4:82633487-82633506 None:intergenic 30.0%
! CAAATCGAATTTTACCTCAA+GGG - chr4_4:82633697-82633716 None:intergenic 30.0%
! ATGATGATTCTTTTTACCCA+CGG - chr4_4:82633747-82633766 None:intergenic 30.0%
TGGGTAAAAAGAATCATCAT+GGG + chr4_4:82633747-82633766 Msa0708860:intron 30.0%
CTATTGGTATATACCAAAGA+GGG + chr4_4:82633857-82633876 Msa0708860:intron 30.0%
GAAGAGCAGAATTCAAAATT+TGG + chr4_4:82634373-82634392 Msa0708860:intron 30.0%
!! ATATTGTTGCTTTGAGGTTA+AGG - chr4_4:82634453-82634472 None:intergenic 30.0%
!! AACAACATATTGTTGCTTTG+AGG - chr4_4:82634459-82634478 None:intergenic 30.0%
! TTTTCTTCTTCTTCTTCTTC+TGG - chr4_4:82634580-82634599 None:intergenic 30.0%
AGAAGAAGAAGAAAAGAGAT+TGG + chr4_4:82634585-82634604 Msa0708860:CDS 30.0%
CAGCTATTAAATGGTAGATA+AGG - chr4_4:82634659-82634678 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr4_4:82634713-82634732 None:intergenic 30.0%
! ATGATTTAGGTTCTCTGTTA+TGG - chr4_4:82635942-82635961 None:intergenic 30.0%
TCTATTCAGCTAAAAAATGC+AGG + chr4_4:82636184-82636203 Msa0708860:intron 30.0%
CTATTCAGCTAAAAAATGCA+GGG + chr4_4:82636185-82636204 Msa0708860:intron 30.0%
AAGAATACATCATCCAAAAG+TGG + chr4_4:82636219-82636238 Msa0708860:CDS 30.0%
AGAATACATCATCCAAAAGT+GGG + chr4_4:82636220-82636239 Msa0708860:CDS 30.0%
! GCATATTTTTCTGAATCAGT+TGG - chr4_4:82636414-82636433 None:intergenic 30.0%
GAAAAATATGCTCAGAAAGA+AGG + chr4_4:82636423-82636442 Msa0708860:CDS 30.0%
!!! TTTTTTGAAGCTGTTTACCA+TGG + chr4_4:82636519-82636538 Msa0708860:CDS 30.0%
! ACTTTGTTTGGAACTTATAG+TGG + chr4_4:82636579-82636598 Msa0708860:CDS 30.0%
TTATCTTGTTGGAAGTCAAT+TGG + chr4_4:82631306-82631325 Msa0708860:five_prime_UTR 30.0%
TATCTTGTTGGAAGTCAATT+GGG + chr4_4:82631307-82631326 Msa0708860:five_prime_UTR 30.0%
ATGCTCTATGATGTTGTTAA+TGG + chr4_4:82636690-82636709 Msa0708860:CDS 30.0%
! AGTTTGTTCAACTACACATT+TGG + chr4_4:82636730-82636749 Msa0708860:CDS 30.0%
! ACAATCCAAATCCCTTTTCA+TGG + chr4_4:82629895-82629914 Msa0708860:five_prime_UTR 35.0%
! TTCAATTGTGGTGCATTTTC+TGG + chr4_4:82629931-82629950 Msa0708860:five_prime_UTR 35.0%
CATCGAATGCTTCTACAATA+GGG - chr4_4:82630028-82630047 None:intergenic 35.0%
TCATCGAATGCTTCTACAAT+AGG - chr4_4:82630029-82630048 None:intergenic 35.0%
! ATTTTCAGAAGAGGAGAGTT+CGG + chr4_4:82630124-82630143 Msa0708860:five_prime_UTR 35.0%
TGTGATGCTAAGAACAATGA+TGG - chr4_4:82630169-82630188 None:intergenic 35.0%
ATCATTGTTCTTAGCATCAC+AGG + chr4_4:82630168-82630187 Msa0708860:five_prime_UTR 35.0%
TTGAATTGAGTCTGATGTGA+AGG - chr4_4:82630229-82630248 None:intergenic 35.0%
! CTATTCTAGCATGGGTTTTA+TGG + chr4_4:82630393-82630412 Msa0708860:intron 35.0%
AAGCTATCTTGAAGAGTTTG+TGG + chr4_4:82630579-82630598 Msa0708860:intron 35.0%
!!! GCATGTTTTTCTGAAGCAAT+TGG - chr4_4:82631082-82631101 None:intergenic 35.0%
!!! CGCTTTTTTACCTTGTTTCA+GGG - chr4_4:82631104-82631123 None:intergenic 35.0%
CCTGAAACAAGGTAAAAAAG+CGG + chr4_4:82631102-82631121 Msa0708860:five_prime_UTR 35.0%
! TTTGAAGCTGTTTACTATGG+TGG + chr4_4:82631190-82631209 Msa0708860:five_prime_UTR 35.0%
! GGAAGATTTGGTTATCTTGT+TGG + chr4_4:82631295-82631314 Msa0708860:five_prime_UTR 35.0%
! AGTTGGATTGGAAGTAGAAT+AGG + chr4_4:82631331-82631350 Msa0708860:five_prime_UTR 35.0%
! GTTGGATTGGAAGTAGAATA+GGG + chr4_4:82631332-82631351 Msa0708860:five_prime_UTR 35.0%
ATGGTATATGATGTGGCTAA+TGG + chr4_4:82631358-82631377 Msa0708860:five_prime_UTR 35.0%
!! CTCCAGTTTTGTATATGGAT+GGG + chr4_4:82631640-82631659 Msa0708860:CDS 35.0%
ATACGATTTATAGGTTCCGA+AGG - chr4_4:82631734-82631753 None:intergenic 35.0%
GGTTTAATAAGTTGCAACAC+CGG - chr4_4:82631883-82631902 None:intergenic 35.0%
AGAGAGAAAAAGATGAAGAG+GGG - chr4_4:82632426-82632445 None:intergenic 35.0%
GTGATTTCATCATCTAAGTG+TGG + chr4_4:82632494-82632513 Msa0708860:intron 35.0%
ATTTCATCATCTAAGTGTGG+TGG + chr4_4:82632497-82632516 Msa0708860:intron 35.0%
AAATAAACACCGCAAGAAGA+CGG - chr4_4:82632561-82632580 None:intergenic 35.0%
CTCTCATCTATCAACGAAAA+AGG - chr4_4:82633171-82633190 None:intergenic 35.0%
GCCCATGTAACCTAAAAATT+TGG + chr4_4:82633190-82633209 Msa0708860:intron 35.0%
AGGTAGCTTAGCATTTAATG+GGG - chr4_4:82633485-82633504 None:intergenic 35.0%
GGGTATTTATAGGTGGTTTA+AGG - chr4_4:82633505-82633524 None:intergenic 35.0%
ATAATGTGAGGAAAAGAGGA+TGG - chr4_4:82633534-82633553 None:intergenic 35.0%
AGAGATAATGTGAGGAAAAG+AGG - chr4_4:82633538-82633557 None:intergenic 35.0%
AAAACAGAGAGAGAGAAAGA+GGG - chr4_4:82633565-82633584 None:intergenic 35.0%
AAAAACAGAGAGAGAGAAAG+AGG - chr4_4:82633566-82633585 None:intergenic 35.0%
! GCAAATCGAATTTTACCTCA+AGG - chr4_4:82633698-82633717 None:intergenic 35.0%
! TCCCAAAATCTTTTTACCGT+GGG + chr4_4:82633728-82633747 Msa0708860:intron 35.0%
! ACCCACGGTAAAAAGATTTT+GGG - chr4_4:82633732-82633751 None:intergenic 35.0%
! TACCCACGGTAAAAAGATTT+TGG - chr4_4:82633733-82633752 None:intergenic 35.0%
GTGGGTAAAAAGAATCATCA+TGG + chr4_4:82633746-82633765 Msa0708860:intron 35.0%
GGGTAAAAAGAATCATCATG+GGG + chr4_4:82633748-82633767 Msa0708860:intron 35.0%
GGTAAAAAGAATCATCATGG+GGG + chr4_4:82633749-82633768 Msa0708860:intron 35.0%
! AATCATCATGGGGGTATAAA+AGG + chr4_4:82633758-82633777 Msa0708860:intron 35.0%
GTATATACCAATAGCTCTTG+GGG - chr4_4:82633851-82633870 None:intergenic 35.0%
GGTATATACCAATAGCTCTT+GGG - chr4_4:82633852-82633871 None:intergenic 35.0%
TGGTATATACCAATAGCTCT+TGG - chr4_4:82633853-82633872 None:intergenic 35.0%
GCTATTGGTATATACCAAAG+AGG + chr4_4:82633856-82633875 Msa0708860:intron 35.0%
TGCACTCTACAGTTGTTAAT+GGG - chr4_4:82634400-82634419 None:intergenic 35.0%
!!! AACTCTTTTTTACCATGCCA+TGG + chr4_4:82634550-82634569 Msa0708860:CDS 35.0%
TGTGATGCTAAGAATAACGA+TGG - chr4_4:82634630-82634649 None:intergenic 35.0%
ATCGTTATTCTTAGCATCAC+AGG + chr4_4:82634629-82634648 Msa0708860:intron 35.0%
TAGCAACTGCAGCTATTAAA+TGG - chr4_4:82634668-82634687 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr4_4:82634912-82634931 Msa0708860:intron 35.0%
GGGTACAAAAAATAGAGAGA+AGG - chr4_4:82635063-82635082 None:intergenic 35.0%
!!! AAAATCAGTCTGCCACTTTT+TGG - chr4_4:82635213-82635232 None:intergenic 35.0%
!! AAAAAGTGGCAGACTGATTT+TGG + chr4_4:82635212-82635231 Msa0708860:intron 35.0%
CCAACTTAACATTTGATGCA+AGG - chr4_4:82636080-82636099 None:intergenic 35.0%
CCTTGCATCAAATGTTAAGT+TGG + chr4_4:82636077-82636096 Msa0708860:intron 35.0%
TAGTCAAAGATAAGAACCCA+AGG - chr4_4:82636112-82636131 None:intergenic 35.0%
TGGGTTCTTATCTTTGACTA+TGG + chr4_4:82636112-82636131 Msa0708860:intron 35.0%
GTTCTTATCTTTGACTATGG+AGG + chr4_4:82636115-82636134 Msa0708860:intron 35.0%
! GAATGTAAACTTCCCACTTT+TGG - chr4_4:82636235-82636254 None:intergenic 35.0%
ATAGGTCCGATTATCTCTTT+CGG + chr4_4:82636489-82636508 Msa0708860:CDS 35.0%
CTTTACAGAGGGATTTCTTA+GGG + chr4_4:82636548-82636567 Msa0708860:CDS 35.0%
TTTACAGAGGGATTTCTTAG+GGG + chr4_4:82636549-82636568 Msa0708860:CDS 35.0%
! TTGTTTGGAACTTATAGTGG+AGG + chr4_4:82636582-82636601 Msa0708860:CDS 35.0%
! GGAAGATTTGGTTATCTTGT+TGG + chr4_4:82631295-82631314 Msa0708860:five_prime_UTR 35.0%
TTGTTCAACTACACATTTGG+AGG + chr4_4:82636733-82636752 Msa0708860:CDS 35.0%
TACACATTTGGAGGTAGAAT+AGG + chr4_4:82636742-82636761 Msa0708860:exon 35.0%
! CAAGTGTTCAATTTTGCTTG+TGG + chr4_4:82636780-82636799 Msa0708860:three_prime_UTR 35.0%
!!! TCTTAGGTGCTTTAGAGTTT+TGG + chr4_4:82636900-82636919 Msa0708860:three_prime_UTR 35.0%
GAAAAGGGATTTGGATTGTG+TGG - chr4_4:82629894-82629913 None:intergenic 40.0%
! CGAGAGTCCATTTTCAATTG+TGG + chr4_4:82629919-82629938 Msa0708860:five_prime_UTR 40.0%
TGAAAATCCATGGCATGGAA+TGG - chr4_4:82630111-82630130 None:intergenic 40.0%
! TCTTCTGAAAATCCATGGCA+TGG - chr4_4:82630116-82630135 None:intergenic 40.0%
! ATGCCATGGATTTTCAGAAG+AGG + chr4_4:82630115-82630134 Msa0708860:five_prime_UTR 40.0%
! TCTCCTCTTCTGAAAATCCA+TGG - chr4_4:82630121-82630140 None:intergenic 40.0%
CAATGATGGCAGATACAGAT+AGG - chr4_4:82630155-82630174 None:intergenic 40.0%
TTGACCCCAAAAATTGGCAT+AGG + chr4_4:82630353-82630372 Msa0708860:intron 40.0%
! GTCTCCTATGCCAATTTTTG+GGG - chr4_4:82630360-82630379 None:intergenic 40.0%
! CGTCTCCTATGCCAATTTTT+GGG - chr4_4:82630361-82630380 None:intergenic 40.0%
! TCGTCTCCTATGCCAATTTT+TGG - chr4_4:82630362-82630381 None:intergenic 40.0%
TTATTACCACATCACGACAC+AGG - chr4_4:82630728-82630747 None:intergenic 40.0%
AGGGAAACCACTTTGATGTA+AGG - chr4_4:82630767-82630786 None:intergenic 40.0%
AATATGAGAACCCAGAGCTA+GGG - chr4_4:82630786-82630805 None:intergenic 40.0%
AAATATGAGAACCCAGAGCT+AGG - chr4_4:82630787-82630806 None:intergenic 40.0%
AATTGCTTTGATATGGGCTC+AGG + chr4_4:82630926-82630945 Msa0708860:five_prime_UTR 40.0%
GAAAAACATGCCCTGAAACA+AGG + chr4_4:82631091-82631110 Msa0708860:five_prime_UTR 40.0%
!!! CCGCTTTTTTACCTTGTTTC+AGG - chr4_4:82631105-82631124 None:intergenic 40.0%
AGGTAAAAAAGCGGCGAAAT+TGG + chr4_4:82631111-82631130 Msa0708860:five_prime_UTR 40.0%
AGCTTCAAAAAAGTCCCATC+CGG - chr4_4:82631179-82631198 None:intergenic 40.0%
TATGGTGGTACCTTTACAGA+GGG + chr4_4:82631205-82631224 Msa0708860:five_prime_UTR 40.0%
! GGTACGTTGTTTGGAACTTA+CGG + chr4_4:82631244-82631263 Msa0708860:five_prime_UTR 40.0%
! TTGTTTGGAACTTACGGTGT+AGG + chr4_4:82631250-82631269 Msa0708860:five_prime_UTR 40.0%
AACTTACGGTGTAGGTTTCA+TGG + chr4_4:82631258-82631277 Msa0708860:five_prime_UTR 40.0%
ACTTACGGTGTAGGTTTCAT+GGG + chr4_4:82631259-82631278 Msa0708860:five_prime_UTR 40.0%
TTGGAAGTCAATTGGGAAGT+TGG + chr4_4:82631314-82631333 Msa0708860:five_prime_UTR 40.0%
AGTCAATTGGGAAGTTGGAT+TGG + chr4_4:82631319-82631338 Msa0708860:five_prime_UTR 40.0%
!! CCTCTAGAGCTGTCATAAAT+AGG - chr4_4:82631488-82631507 None:intergenic 40.0%
! CCTATTTATGACAGCTCTAG+AGG + chr4_4:82631485-82631504 Msa0708860:five_prime_UTR 40.0%
!! GTCTGCTCCAGTTTTGTATA+TGG + chr4_4:82631635-82631654 Msa0708860:CDS 40.0%
!! GCTCCAGTTTTGTATATGGA+TGG + chr4_4:82631639-82631658 Msa0708860:CDS 40.0%
GACCCATCCATATACAAAAC+TGG - chr4_4:82631645-82631664 None:intergenic 40.0%
TGAAACATATGGCGTCTAGA+AGG + chr4_4:82631969-82631988 Msa0708860:intron 40.0%
GAAACATATGGCGTCTAGAA+GGG + chr4_4:82631970-82631989 Msa0708860:intron 40.0%
TAAAGAGGGAAAACTAGAGC+CGG - chr4_4:82632341-82632360 None:intergenic 40.0%
! TCATTTTCTTCATTGAGGGG+TGG + chr4_4:82632372-82632391 Msa0708860:intron 40.0%
! TTTGATTTCCCGTCTTCTTG+CGG + chr4_4:82632549-82632568 Msa0708860:intron 40.0%
AATAAACACCGCAAGAAGAC+GGG - chr4_4:82632560-82632579 None:intergenic 40.0%
CAACACCGCTAAAAACGTAA+AGG - chr4_4:82632750-82632769 None:intergenic 40.0%
! AACTAACGCAAGGGCATATT+TGG - chr4_4:82633264-82633283 None:intergenic 40.0%
TAAGTCACGCAGAGCTTATA+AGG - chr4_4:82633316-82633335 None:intergenic 40.0%
!!! AACAAACGTTTTTTGGACGG+TGG + chr4_4:82633401-82633420 Msa0708860:intron 40.0%
!! CGGTGGTCAATGCTTTTTAT+TGG + chr4_4:82633418-82633437 Msa0708860:intron 40.0%
!! ATGGTTGGGAGGGTATTTAT+AGG - chr4_4:82633515-82633534 None:intergenic 40.0%
AAACAGAGAGAGAGAAAGAG+GGG - chr4_4:82633564-82633583 None:intergenic 40.0%
TCTAGGCTTCTTTAGTCTCT+AGG + chr4_4:82633601-82633620 Msa0708860:intron 40.0%
CCACTGGTATATACCTAAAG+CGG - chr4_4:82633627-82633646 None:intergenic 40.0%
! AGGTATATACCAGTGGCTTT+TGG + chr4_4:82633631-82633650 Msa0708860:intron 40.0%
! GGTATATACCAGTGGCTTTT+GGG + chr4_4:82633632-82633651 Msa0708860:intron 40.0%
! GTATATACCAGTGGCTTTTG+GGG + chr4_4:82633633-82633652 Msa0708860:intron 40.0%
! TATATACCAGTGGCTTTTGG+GGG + chr4_4:82633634-82633653 Msa0708860:intron 40.0%
! CTCCCAAAATCTTTTTACCG+TGG + chr4_4:82633727-82633746 Msa0708860:intron 40.0%
AAAGACATCAAGATCCCTTG+AGG - chr4_4:82633801-82633820 None:intergenic 40.0%
! TTGATGTCTTTTTCCCCAAC+AGG + chr4_4:82633810-82633829 Msa0708860:intron 40.0%
AAATAGTGATCCGTCCTGTT+GGG - chr4_4:82633827-82633846 None:intergenic 40.0%
AAAATAGTGATCCGTCCTGT+TGG - chr4_4:82633828-82633847 None:intergenic 40.0%
! CTATTTTCCCCAAGAGCTAT+TGG + chr4_4:82633841-82633860 Msa0708860:intron 40.0%
CTGCACTCTACAGTTGTTAA+TGG - chr4_4:82634401-82634420 None:intergenic 40.0%
! TGCCTTTTACTACTCTGGTA+AGG + chr4_4:82634421-82634440 Msa0708860:intron 40.0%
! GCCTTTTACTACTCTGGTAA+GGG + chr4_4:82634422-82634441 Msa0708860:intron 40.0%
! CCTTTTACTACTCTGGTAAG+GGG + chr4_4:82634423-82634442 Msa0708860:intron 40.0%
! CTTTTACTACTCTGGTAAGG+GGG + chr4_4:82634424-82634443 Msa0708860:intron 40.0%
! CTTCTTCTTCTGGAAATCCA+TGG - chr4_4:82634570-82634589 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - chr4_4:82634952-82634971 None:intergenic 40.0%
! GTGGTGTGCAGAGTATTAAT+TGG + chr4_4:82634844-82634863 Msa0708860:intron 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + chr4_4:82634952-82634971 Msa0708860:intron 40.0%
!! TTTGGTGTCACTAGCTACAA+GGG - chr4_4:82635195-82635214 None:intergenic 40.0%
!!! TTTTGGTGTCACTAGCTACA+AGG - chr4_4:82635196-82635215 None:intergenic 40.0%
TAGCTAGTGACACCAAAAAG+TGG + chr4_4:82635198-82635217 Msa0708860:intron 40.0%
GGAAATGTTAACGAGTGTCT+CGG + chr4_4:82635561-82635580 Msa0708860:intron 40.0%
GAAATGTTAACGAGTGTCTC+GGG + chr4_4:82635562-82635581 Msa0708860:intron 40.0%
AAGATAAGAACCCAAGGCTA+GGG - chr4_4:82636106-82636125 None:intergenic 40.0%
AAAGATAAGAACCCAAGGCT+AGG - chr4_4:82636107-82636126 None:intergenic 40.0%
AAAAAATGCAGGGAGCTTGT+TGG + chr4_4:82636195-82636214 Msa0708860:CDS 40.0%
AATTGCTTTGATATGGGCTC+TGG + chr4_4:82630926-82630945 Msa0708860:five_prime_UTR 40.0%
! TCTTGTCTATGCTGCTTCAA+AGG + chr4_4:82636380-82636399 Msa0708860:CDS 40.0%
! CTTGTCTATGCTGCTTCAAA+GGG + chr4_4:82636381-82636400 Msa0708860:CDS 40.0%
GATGAAATTGGCTACTCGTA+AGG + chr4_4:82636455-82636474 Msa0708860:CDS 40.0%
AGATAATCGGACCTATAACG+CGG - chr4_4:82636485-82636504 None:intergenic 40.0%
TCCGATTATCTCTTTCGGAT+GGG + chr4_4:82636494-82636513 Msa0708860:CDS 40.0%
TCCCATCCGAAAGAGATAAT+CGG - chr4_4:82636498-82636517 None:intergenic 40.0%
! TTTGAAGCTGTTTACCATGG+TGG + chr4_4:82636522-82636541 Msa0708860:CDS 40.0%
CCTAAGAAATCCCTCTGTAA+AGG - chr4_4:82636550-82636569 None:intergenic 40.0%
CCTTTACAGAGGGATTTCTT+AGG + chr4_4:82636547-82636566 Msa0708860:CDS 40.0%
AGGGGAACTAGTACTTTGTT+TGG + chr4_4:82636567-82636586 Msa0708860:CDS 40.0%
! AACTTATAGTGGAGGCTTCA+TGG + chr4_4:82636590-82636609 Msa0708860:CDS 40.0%
! ACTTATAGTGGAGGCTTCAT+GGG + chr4_4:82636591-82636610 Msa0708860:CDS 40.0%
GAGCAAAGACTTGGAAGATT+TGG + chr4_4:82636615-82636634 Msa0708860:CDS 40.0%
TTGGAAGTCAATTGGGAAGT+TGG + chr4_4:82631314-82631333 Msa0708860:five_prime_UTR 40.0%
TGGAAGTCAATTGGGAAGTT+GGG + chr4_4:82631315-82631334 Msa0708860:five_prime_UTR 40.0%
!! GGTTGAATACCGATTCGTTA+TGG + chr4_4:82636921-82636940 Msa0708860:three_prime_UTR 40.0%
CTCGACCATGAAAAGGGATT+TGG - chr4_4:82629903-82629922 None:intergenic 45.0%
TGGACTCTCGACCATGAAAA+GGG - chr4_4:82629909-82629928 None:intergenic 45.0%
ATGGACTCTCGACCATGAAA+AGG - chr4_4:82629910-82629929 None:intergenic 45.0%
TATCTCCCTTTCTCGTGAGA+GGG + chr4_4:82629965-82629984 Msa0708860:five_prime_UTR 45.0%
AGAATCCCTCTCACGAGAAA+GGG - chr4_4:82629973-82629992 None:intergenic 45.0%
AAGAATCCCTCTCACGAGAA+AGG - chr4_4:82629974-82629993 None:intergenic 45.0%
GTTTCTTCCATTCCATGCCA+TGG + chr4_4:82630101-82630120 Msa0708860:five_prime_UTR 45.0%
! TTAGGGGAGTTTTCCTGATC+AGG + chr4_4:82630299-82630318 Msa0708860:intron 45.0%
! AAAGTGGTTTCCCTAGCTCT+GGG + chr4_4:82630773-82630792 Msa0708860:intron 45.0%
TCCGTTCAGCTGAAAAATGC+AGG + chr4_4:82630852-82630871 Msa0708860:intron 45.0%
!! CCCTGCATTTTTCAGCTGAA+CGG - chr4_4:82630856-82630875 None:intergenic 45.0%
CCGTTCAGCTGAAAAATGCA+GGG + chr4_4:82630853-82630872 Msa0708860:intron 45.0%
GAAAAATGCAGGGAGCTTGT+TGG + chr4_4:82630863-82630882 Msa0708860:five_prime_UTR 45.0%
AGAACGCGTCATCCAAAAGT+GGG + chr4_4:82630888-82630907 Msa0708860:five_prime_UTR 45.0%
CAGCATCAACAAGAGCAGAT+TGG - chr4_4:82631042-82631061 None:intergenic 45.0%
! TCTTGTTGATGCTGCTTCAC+AGG + chr4_4:82631048-82631067 Msa0708860:five_prime_UTR 45.0%
! CTTGTTGATGCTGCTTCACA+GGG + chr4_4:82631049-82631068 Msa0708860:five_prime_UTR 45.0%
CTATGGTGGTACCTTTACAG+AGG + chr4_4:82631204-82631223 Msa0708860:five_prime_UTR 45.0%
TCTGAGGAATCCCTCTGTAA+AGG - chr4_4:82631218-82631237 None:intergenic 45.0%
TTTACAGAGGGATTCCTCAG+AGG + chr4_4:82631217-82631236 Msa0708860:five_prime_UTR 45.0%
AGAGGAACTGGTACGTTGTT+TGG + chr4_4:82631235-82631254 Msa0708860:five_prime_UTR 45.0%
CTTACGGTGTAGGTTTCATG+GGG + chr4_4:82631260-82631279 Msa0708860:five_prime_UTR 45.0%
TTACGGTGTAGGTTTCATGG+GGG + chr4_4:82631261-82631280 Msa0708860:five_prime_UTR 45.0%
GAGCAAAGGCTTGGAAGATT+TGG + chr4_4:82631283-82631302 Msa0708860:five_prime_UTR 45.0%
TGGAAGTAGAATAGGGCTCA+TGG + chr4_4:82631339-82631358 Msa0708860:five_prime_UTR 45.0%
AGGGCTCATGGTATATGATG+TGG + chr4_4:82631351-82631370 Msa0708860:five_prime_UTR 45.0%
GTGCATTTCGTGTTGCAGTA+TGG + chr4_4:82631382-82631401 Msa0708860:five_prime_UTR 45.0%
GTTGATGCAACTCACATCCA+TGG + chr4_4:82631822-82631841 Msa0708860:intron 45.0%
!! CGATTTGGTTGCCTTGTGTT+TGG + chr4_4:82632102-82632121 Msa0708860:intron 45.0%
!!! GGCTCTAGTTTTCCCTCTTT+AGG + chr4_4:82632340-82632359 Msa0708860:intron 45.0%
! TCTTCATTGAGGGGTGGTTT+TGG + chr4_4:82632378-82632397 Msa0708860:intron 45.0%
! CTTCATTGAGGGGTGGTTTT+GGG + chr4_4:82632379-82632398 Msa0708860:intron 45.0%
AGATGAAGAGGGGTGATTTC+AGG - chr4_4:82632416-82632435 None:intergenic 45.0%
! TTGTTGTTCGTCGTCTTGTG+CGG + chr4_4:82632521-82632540 Msa0708860:intron 45.0%
ACTGGAATATCTATGGCCTC+CGG - chr4_4:82632641-82632660 None:intergenic 45.0%
! GTTTTTCATGGGGACGTGAA+AGG - chr4_4:82633036-82633055 None:intergenic 45.0%
GCATATTTGGAAGGCTTGCA+GGG - chr4_4:82633251-82633270 None:intergenic 45.0%
! AACGCAAGGGCATATTTGGA+AGG - chr4_4:82633260-82633279 None:intergenic 45.0%
GCGTGACTTAACTAACGCAA+GGG - chr4_4:82633273-82633292 None:intergenic 45.0%
TGCGTGACTTAACTAACGCA+AGG - chr4_4:82633274-82633293 None:intergenic 45.0%
!! GTTGGGAGGGTATTTATAGG+TGG - chr4_4:82633512-82633531 None:intergenic 45.0%
GTGAGGAAAAGAGGATGGTT+GGG - chr4_4:82633529-82633548 None:intergenic 45.0%
TGTGAGGAAAAGAGGATGGT+TGG - chr4_4:82633530-82633549 None:intergenic 45.0%
AACAGAGAGAGAGAAAGAGG+GGG - chr4_4:82633563-82633582 None:intergenic 45.0%
! TTTAGTCTCTAGGCCGCTTT+AGG + chr4_4:82633611-82633630 Msa0708860:intron 45.0%
! CCGCTTTAGGTATATACCAG+TGG + chr4_4:82633624-82633643 Msa0708860:intron 45.0%
AAGTAGTGGTCCGTTAGGTT+GGG + chr4_4:82633657-82633676 Msa0708860:intron 45.0%
! TGTCTTTTTCCCCAACAGGA+CGG + chr4_4:82633814-82633833 Msa0708860:intron 45.0%
AATAGTGATCCGTCCTGTTG+GGG - chr4_4:82633826-82633845 None:intergenic 45.0%
GTAACGTTGCGCAAGTTAAC+TGG - chr4_4:82634262-82634281 None:intergenic 45.0%
TTGCGCAAGTTAACTAGTGC+AGG + chr4_4:82634305-82634324 Msa0708860:intron 45.0%
TGCGCAAGTTAACTAGTGCA+GGG + chr4_4:82634306-82634325 Msa0708860:intron 45.0%
TAACTAGTGCAGGGGCAATT+TGG + chr4_4:82634315-82634334 Msa0708860:intron 45.0%
AACTAGTGCAGGGGCAATTT+GGG + chr4_4:82634316-82634335 Msa0708860:intron 45.0%
GCAATTTGGGCATGGTTGTA+GGG + chr4_4:82634329-82634348 Msa0708860:intron 45.0%
! TGCAGTGCCTTTTACTACTC+TGG + chr4_4:82634416-82634435 Msa0708860:intron 45.0%
CCCCTTACCAGAGTAGTAAA+AGG - chr4_4:82634426-82634445 None:intergenic 45.0%
CTTTGACAAGAGGGAAGAGT+CGG - chr4_4:82634482-82634501 None:intergenic 45.0%
! TCTTCTGGAAATCCATGGCA+TGG - chr4_4:82634565-82634584 None:intergenic 45.0%
!! AGAATCCTTAAAGAGTGCCC+CGG + chr4_4:82635688-82635707 Msa0708860:intron 45.0%
TCTTGTTAACGAGTGTCTCC+GGG - chr4_4:82635709-82635728 None:intergenic 45.0%
! GTCTTGTTAACGAGTGTCTC+CGG - chr4_4:82635710-82635729 None:intergenic 45.0%
!! TAAGTTGGTTTCCCTAGCCT+TGG + chr4_4:82636092-82636111 Msa0708860:intron 45.0%
! AAGTTGGTTTCCCTAGCCTT+GGG + chr4_4:82636093-82636112 Msa0708860:intron 45.0%
!! GCTCTGGAACTTTAGCATGT+GGG + chr4_4:82636274-82636293 Msa0708860:CDS 45.0%
!! CTCTGGAACTTTAGCATGTG+GGG + chr4_4:82636275-82636294 Msa0708860:CDS 45.0%
AACTTTAGCATGTGGGGTCA+AGG + chr4_4:82636281-82636300 Msa0708860:CDS 45.0%
CAGCATAGACAAGAGCAGAT+AGG - chr4_4:82636374-82636393 None:intergenic 45.0%
GTCCGATTATCTCTTTCGGA+TGG + chr4_4:82636493-82636512 Msa0708860:CDS 45.0%
CATGGTGGTACCTTTACAGA+GGG + chr4_4:82636537-82636556 Msa0708860:CDS 45.0%
TTCATGGGAGAGCAAAGACT+TGG + chr4_4:82636606-82636625 Msa0708860:CDS 45.0%
AGTCAATTGGGAAGTTGGGT+TGG + chr4_4:82636651-82636670 Msa0708860:CDS 45.0%
!! AGTTGGGTTGGAGGTAGAAT+AGG + chr4_4:82636663-82636682 Msa0708860:CDS 45.0%
!! ATATTTATTCATTAAATAAA+AGG - chr4_4:82634069-82634088 None:intergenic 5.0%
CTATCTCCCTTTCTCGTGAG+AGG + chr4_4:82629964-82629983 Msa0708860:five_prime_UTR 50.0%
CATCACGACACAGGTCTGTT+TGG - chr4_4:82630719-82630738 None:intergenic 50.0%
AACAGACCTGTGTCGTGATG+TGG + chr4_4:82630719-82630738 Msa0708860:intron 50.0%
CAAAGTGGTTTCCCTAGCTC+TGG + chr4_4:82630772-82630791 Msa0708860:intron 50.0%
GAGAACGCGTCATCCAAAAG+TGG + chr4_4:82630887-82630906 Msa0708860:five_prime_UTR 50.0%
!! AGATGATGGGACCTGTGATG+CGG - chr4_4:82631153-82631172 None:intergenic 50.0%
ACAGGTCCCATCATCTCTTC+CGG + chr4_4:82631157-82631176 Msa0708860:five_prime_UTR 50.0%
TCCCATCATCTCTTCCGGAT+GGG + chr4_4:82631162-82631181 Msa0708860:five_prime_UTR 50.0%
TCCCATCCGGAAGAGATGAT+GGG - chr4_4:82631166-82631185 None:intergenic 50.0%
ACAACGTACCAGTTCCTCTG+AGG - chr4_4:82631234-82631253 None:intergenic 50.0%
TAGGTTTCATGGGGGAGCAA+AGG + chr4_4:82631269-82631288 Msa0708860:five_prime_UTR 50.0%
ATGGCGTCTAGAAGGGAAGT+AGG + chr4_4:82631977-82631996 Msa0708860:intron 50.0%
TGGCGTCTAGAAGGGAAGTA+GGG + chr4_4:82631978-82631997 Msa0708860:intron 50.0%
!! GAAAACTAGAGCCGGCTTGT+TGG - chr4_4:82632333-82632352 None:intergenic 50.0%
TCATGGGGACGTGAAAGGTT+TGG - chr4_4:82633031-82633050 None:intergenic 50.0%
GGCATATTTGGAAGGCTTGC+AGG - chr4_4:82633252-82633271 None:intergenic 50.0%
TTAACTCGCGCATAGGTCAG+TGG - chr4_4:82633348-82633367 None:intergenic 50.0%
GGAAAAGAGGATGGTTGGGA+GGG - chr4_4:82633525-82633544 None:intergenic 50.0%
AGGAAAAGAGGATGGTTGGG+AGG - chr4_4:82633526-82633545 None:intergenic 50.0%
AGGGGGAGAGAGATAATGTG+AGG - chr4_4:82633546-82633565 None:intergenic 50.0%
GAAGTAGTGGTCCGTTAGGT+TGG + chr4_4:82633656-82633675 Msa0708860:intron 50.0%
! AGTAGTGGTCCGTTAGGTTG+GGG + chr4_4:82633658-82633677 Msa0708860:intron 50.0%
!! GTCCGTTAGGTTGGGGAAAA+GGG + chr4_4:82633665-82633684 Msa0708860:intron 50.0%
! TGCCCTTTTCCCCAACCTAA+CGG - chr4_4:82633670-82633689 None:intergenic 50.0%
!! GAAAAGGGCATCATCCCTTG+AGG + chr4_4:82633680-82633699 Msa0708860:intron 50.0%
GCGCAAGTTAACTAGTGCAG+GGG + chr4_4:82634307-82634326 Msa0708860:intron 50.0%
GGCAATTTGGGCATGGTTGT+AGG + chr4_4:82634328-82634347 Msa0708860:intron 50.0%
CTTGTTAACGAGTGTCTCCG+GGG - chr4_4:82635708-82635727 None:intergenic 50.0%
!! GGCTCTGGAACTTTAGCATG+TGG + chr4_4:82636273-82636292 Msa0708860:CDS 50.0%
AGGCGCGAAAGCGATGAAAT+TGG + chr4_4:82636443-82636462 Msa0708860:CDS 50.0%
AATCGGACCTATAACGCGGT+TGG - chr4_4:82636481-82636500 None:intergenic 50.0%
!! CCTCTGTAAAGGTACCACCA+TGG - chr4_4:82631207-82631226 None:intergenic 50.0%
CCATGGTGGTACCTTTACAG+AGG + chr4_4:82636536-82636555 Msa0708860:CDS 50.0%
!! CAATTGGGAAGTTGGGTTGG+AGG + chr4_4:82636654-82636673 Msa0708860:CDS 50.0%
GCTCAGGAACGCTAGCATGT+GGG + chr4_4:82630942-82630961 Msa0708860:five_prime_UTR 55.0%
CTCAGGAACGCTAGCATGTG+GGG + chr4_4:82630943-82630962 Msa0708860:five_prime_UTR 55.0%
GGCGAAATTGGCTACCCGTA+AGG + chr4_4:82631123-82631142 Msa0708860:five_prime_UTR 55.0%
!! TGTGATGCGGTTGGCCTTAC+GGG - chr4_4:82631140-82631159 None:intergenic 55.0%
!! CTGTGATGCGGTTGGCCTTA+CGG - chr4_4:82631141-82631160 None:intergenic 55.0%
GTCCCATCATCTCTTCCGGA+TGG + chr4_4:82631161-82631180 Msa0708860:five_prime_UTR 55.0%
GTCCCATCCGGAAGAGATGA+TGG - chr4_4:82631167-82631186 None:intergenic 55.0%
GAGGGATTCCTCAGAGGAAC+TGG + chr4_4:82631223-82631242 Msa0708860:five_prime_UTR 55.0%
TTCATGGGGGAGCAAAGGCT+TGG + chr4_4:82631274-82631293 Msa0708860:five_prime_UTR 55.0%
GGCGTCTAGAAGGGAAGTAG+GGG + chr4_4:82631979-82631998 Msa0708860:intron 55.0%
GCGTCTAGAAGGGAAGTAGG+GGG + chr4_4:82631980-82631999 Msa0708860:intron 55.0%
!! TAGAGCCGGCTTGTTGGAGA+GGG - chr4_4:82632327-82632346 None:intergenic 55.0%
GAGCGTCAACGTTGCAGATC+CGG + chr4_4:82632619-82632638 Msa0708860:intron 55.0%
TGGGGACGTGAAAGGTTTGG+TGG - chr4_4:82633028-82633047 None:intergenic 55.0%
GCGAGTTAACTCGCGCTAGT+TGG + chr4_4:82633359-82633378 Msa0708860:intron 55.0%
GTTAACTCGCGCTAGTTGGC+TGG + chr4_4:82633363-82633382 Msa0708860:intron 55.0%
CTACTTCCCCCAAAAGCCAC+TGG - chr4_4:82633643-82633662 None:intergenic 55.0%
!! GTGGCTTTTGGGGGAAGTAG+TGG + chr4_4:82633643-82633662 Msa0708860:intron 55.0%
!! GGTCCGTTAGGTTGGGGAAA+AGG + chr4_4:82633664-82633683 Msa0708860:intron 55.0%
TGCGCAAGTTAACTGGCGCA+AGG - chr4_4:82634255-82634274 None:intergenic 55.0%
! GGGTGCGAGTGTTTTGTGCT+CGG + chr4_4:82634349-82634368 Msa0708860:intron 55.0%
! GGTGCGAGTGTTTTGTGCTC+GGG + chr4_4:82634350-82634369 Msa0708860:intron 55.0%
! GTGCGAGTGTTTTGTGCTCG+GGG + chr4_4:82634351-82634370 Msa0708860:intron 55.0%
! TGTCTCCGGGGCACTCTTTA+AGG - chr4_4:82635696-82635715 None:intergenic 55.0%
CGTAAGGCCAACCGCGTTAT+AGG + chr4_4:82636471-82636490 Msa0708860:CDS 55.0%
GGCTCAGGAACGCTAGCATG+TGG + chr4_4:82630941-82630960 Msa0708860:five_prime_UTR 60.0%
CGTAAGGCCAACCGCATCAC+AGG + chr4_4:82631139-82631158 Msa0708860:five_prime_UTR 60.0%
GATGGGACCTGTGATGCGGT+TGG - chr4_4:82631149-82631168 None:intergenic 60.0%
AGGGAAGTAGGGGGCGAAGT+TGG + chr4_4:82631989-82632008 Msa0708860:intron 60.0%
!! CTAGAGCCGGCTTGTTGGAG+AGG - chr4_4:82632328-82632347 None:intergenic 60.0%
CGTCAACGTTGCAGATCCGG+AGG + chr4_4:82632622-82632641 Msa0708860:intron 60.0%
GCGCGAGTTAACTCGCGCAT+AGG - chr4_4:82633355-82633374 None:intergenic 60.0%
AACTCGCGCTAGTTGGCTGG+TGG + chr4_4:82633366-82633385 Msa0708860:intron 60.0%
GGGGGAAGTAGTGGTCCGTT+AGG + chr4_4:82633652-82633671 Msa0708860:intron 60.0%
GTGCAGGGGCAATTTGGGCA+TGG + chr4_4:82634321-82634340 Msa0708860:intron 60.0%
!! CCGGCTTGTTGGAGAGGGAG+GGG - chr4_4:82632322-82632341 None:intergenic 65.0%
CCCCTCCCTCTCCAACAAGC+CGG + chr4_4:82632319-82632338 Msa0708860:intron 65.0%
!! GCCGGCTTGTTGGAGAGGGA+GGG - chr4_4:82632323-82632342 None:intergenic 65.0%
!! AGCCGGCTTGTTGGAGAGGG+AGG - chr4_4:82632324-82632343 None:intergenic 65.0%
GGGCGCGAGCGAAATGTGCT+GGG - chr4_4:82633231-82633250 None:intergenic 65.0%
AGGGCGCGAGCGAAATGTGC+TGG - chr4_4:82633232-82633251 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 82629891 82636986 82629891 ID=Msa0708860;Name=Msa0708860
chr4_4 mRNA 82629891 82636986 82629891 ID=Msa0708860-mRNA-1;Parent=Msa0708860;Name=Msa0708860-mRNA-1;_AED=0.05;_eAED=0.09;_QI=964|0.33|0.5|1|0.33|0.5|4|228|265
chr4_4 exon 82629891 82630189 82629891 ID=Msa0708860-mRNA-1:exon:27193;Parent=Msa0708860-mRNA-1
chr4_4 exon 82630861 82631661 82630861 ID=Msa0708860-mRNA-1:exon:27194;Parent=Msa0708860-mRNA-1
chr4_4 exon 82634536 82634631 82634536 ID=Msa0708860-mRNA-1:exon:27195;Parent=Msa0708860-mRNA-1
chr4_4 exon 82636193 82636986 82636193 ID=Msa0708860-mRNA-1:exon:27196;Parent=Msa0708860-mRNA-1
chr4_4 five_prime_UTR 82629891 82630189 82629891 ID=Msa0708860-mRNA-1:five_prime_utr;Parent=Msa0708860-mRNA-1
chr4_4 five_prime_UTR 82630861 82631525 82630861 ID=Msa0708860-mRNA-1:five_prime_utr;Parent=Msa0708860-mRNA-1
chr4_4 CDS 82631526 82631661 82631526 ID=Msa0708860-mRNA-1:cds;Parent=Msa0708860-mRNA-1
chr4_4 CDS 82634536 82634631 82634536 ID=Msa0708860-mRNA-1:cds;Parent=Msa0708860-mRNA-1
chr4_4 CDS 82636193 82636758 82636193 ID=Msa0708860-mRNA-1:cds;Parent=Msa0708860-mRNA-1
chr4_4 three_prime_UTR 82636759 82636986 82636759 ID=Msa0708860-mRNA-1:three_prime_utr;Parent=Msa0708860-mRNA-1
Gene Sequence

>Msa0708860

ATGAATATATCTATTAACGGCAAGAAAGCATATAAAGATTCTGTTTATACCAATATTGTTTTTCTTTTCACATTATATGATTGGATGTACATGTGTTCTTATTCTCTGTGTCTGCTCCAGTTTTGTATATGGATGGGTTATGTTATTTTTAACTCTTTTTTACCATGCCATGGATTTCCAGAAGAAGAAGAAGAAGAAAAGAGATTGGTTTCTTCTATTTGTCGCTGCCATCCTAAAAAATGCAGGGAGCTTGTTGGCAAGAATACATCATCCAAAAGTGGGAAGTTTACATTCTTAAATTGCTTTGATATGGGCTCTGGAACTTTAGCATGTGGGGTCAAGGAAAGTGTGAAGCTCTATGCTAACAGTATTAGATCTTCTCATGTTGAAAAAGCAAGAGATGATACAATCCTATCTGCTCTTGTCTATGCTGCTTCAAAGGGTATGTCACCAACTGATTCAGAAAAATATGCTCAGAAAGAAGGCGCGAAAGCGATGAAATTGGCTACTCGTAAGGCCAACCGCGTTATAGGTCCGATTATCTCTTTCGGATGGGACTTTTTTGAAGCTGTTTACCATGGTGGTACCTTTACAGAGGGATTTCTTAGGGGAACTAGTACTTTGTTTGGAACTTATAGTGGAGGCTTCATGGGAGAGCAAAGACTTGGAAGATTTGGTTATCTTGTTGGAAGTCAATTGGGAAGTTGGGTTGGAGGTAGAATAGGACTCATGCTCTATGATGTTGTTAATGGAGTGCATTATATGTTGCAGTTTGTTCAACTACACATTTGGAGGTAG

Protein sequence

>Msa0708860

MNISINGKKAYKDSVYTNIVFLFTLYDWMYMCSYSLCLLQFCIWMGYVIFNSFLPCHGFPEEEEEEKRLVSSICRCHPKKCRELVGKNTSSKSGKFTFLNCFDMGSGTLACGVKESVKLYANSIRSSHVEKARDDTILSALVYAASKGMSPTDSEKYAQKEGAKAMKLATRKANRVIGPIISFGWDFFEAVYHGGTFTEGFLRGTSTLFGTYSGGFMGEQRLGRFGYLVGSQLGSWVGGRIGLMLYDVVNGVHYMLQFVQLHIWR*