AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0428930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428930 MtrunA17_Chr3g0132751 84.000 400 22 2 1 399 1 359 0.0 622
Msa0428930 MtrunA17_Chr4g0049741 39.503 362 132 9 54 399 29 319 1.28e-68 220
Msa0428930 MtrunA17_Chr5g0427661 46.522 230 111 6 12 235 14 237 1.61e-54 182
Msa0428930 MtrunA17_Chr3g0132761 52.071 169 75 3 68 235 71 234 2.52e-50 171
Msa0428930 MtrunA17_Chr3g0102511 40.930 215 60 6 154 347 4 172 3.11e-32 127
Msa0428930 MtrunA17_Chr4g0002231 46.154 104 47 3 147 243 42 143 4.78e-24 97.1
Msa0428930 MtrunA17_Chr4g0002261 59.322 59 23 1 112 169 6 64 5.53e-15 69.3
Msa0428930 MtrunA17_Chr4g0002251 68.421 38 12 0 194 231 2 39 6.97e-13 63.5
Msa0428930 MtrunA17_Chr3g0091641 57.143 49 21 0 122 170 490 538 9.60e-12 66.6
Msa0428930 MtrunA17_Chr4g0061021 57.143 49 21 0 122 170 497 545 4.02e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428930 AT3G21175.2 56.069 173 71 2 68 235 79 251 1.07e-55 186
Msa0428930 AT3G21175.1 55.429 175 71 3 68 235 79 253 9.87e-54 180
Msa0428930 AT1G51600.1 54.190 179 67 4 68 235 83 257 3.22e-52 177
Msa0428930 AT1G51600.2 54.190 179 67 4 68 235 83 257 3.22e-52 177
Msa0428930 AT4G24470.1 49.112 169 82 3 68 235 83 248 1.21e-44 157
Msa0428930 AT4G24470.2 49.112 169 82 3 68 235 83 248 1.21e-44 157
Msa0428930 AT4G24470.3 49.112 169 82 3 68 235 83 248 1.70e-44 157
Msa0428930 AT3G21175.3 52.174 138 59 3 68 198 79 216 2.10e-32 122

Find 161 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTGGCATGGGAGCTGCCT+GGG 0.155784 3_2:+80021411 Msa0428930:CDS
TTTAAAACTCACAGAGATTC+AGG 0.223095 3_2:-80020819 None:intergenic
ACCAAACTGATATTCAAATT+AGG 0.228352 3_2:-80023704 None:intergenic
CATGCATTGCACAAAGTTCT+TGG 0.230172 3_2:-80020991 None:intergenic
CCAAACTGATATTCAAATTA+GGG 0.255832 3_2:-80023703 None:intergenic
TTCATTTCAACTCTCTTCTA+TGG 0.262209 3_2:+80015702 Msa0428930:exon
GATAATCTTCCTTGAGTGTT+TGG 0.263324 3_2:+80023564 Msa0428930:three_prime_UTR
TCCCTGGCATGGGAGCTGCC+TGG 0.271945 3_2:+80021410 Msa0428930:CDS
AGTTCAGCTGTGGGCATGCC+TGG 0.281391 3_2:-80018137 None:intergenic
GGATATTCTTCATGTAGATA+TGG 0.286797 3_2:+80023359 Msa0428930:three_prime_UTR
GCAATGCGTCGCGGACCAGC+TGG 0.303019 3_2:+80020967 Msa0428930:CDS
ATAATCTTCCTTGAGTGTTT+GGG 0.304901 3_2:+80023565 Msa0428930:three_prime_UTR
GCTATTCTTCGTGAAAGATT+TGG 0.306955 3_2:-80018297 None:intergenic
GCAGCTGCAGTTGCAGTTGC+AGG 0.307759 3_2:-80015880 None:intergenic
TCCTGGAAACTTTGATTAGA+AGG 0.311641 3_2:+80023287 Msa0428930:exon
TGCCATTTGATCAGAGTAAC+AGG 0.315044 3_2:+80018159 Msa0428930:CDS
GATACAGATATTGACATTCC+TGG 0.340740 3_2:+80023270 Msa0428930:CDS
GAAGTTTAGGCTTGTGCTGC+TGG 0.343501 3_2:+80023735 Msa0428930:three_prime_UTR
GGACTCTTAGTGGGAGCATT+TGG 0.345347 3_2:+80023756 Msa0428930:three_prime_UTR
CAAATTAGGGGTCCATCCTT+TGG 0.356036 3_2:-80023690 None:intergenic
GCTGGTCCGCGACGCATTGC+AGG 0.357972 3_2:-80020964 None:intergenic
CCCTAATTTGAATATCAGTT+TGG 0.359772 3_2:+80023703 Msa0428930:three_prime_UTR
CTAATCCACCACTGGGTGTA+AGG 0.365803 3_2:-80021450 None:intergenic
ATTGGTAATTTGTCATTCTT+CGG 0.372377 3_2:+80022938 Msa0428930:CDS
TCCTGCAATCTCTAGGGCTT+GGG 0.375005 3_2:+80018258 Msa0428930:intron
ACCAGACGACTTTGCTCAAC+AGG 0.377857 3_2:-80021676 None:intergenic
AGAGCTTCTCCACCCTTGAT+AGG 0.380566 3_2:-80023465 None:intergenic
TGATGATACTATGGATGAAT+TGG 0.387456 3_2:+80015810 Msa0428930:CDS
ACCTTCTAATCAAAGTTTCC+AGG 0.390784 3_2:-80023288 None:intergenic
CCCCAGGCAGCTCCCATGCC+AGG 0.395526 3_2:-80021412 None:intergenic
CAATGATATTAGACAGTTAT+GGG 0.400631 3_2:+80023398 Msa0428930:three_prime_UTR
TGCTAGGATGCATCGGGAAA+AGG 0.402415 3_2:+80020713 Msa0428930:intron
TCAATAGCTGGAATTGTTGC+AGG 0.402850 3_2:-80015751 None:intergenic
ACTCACAGAGATTCAGGATT+AGG 0.406041 3_2:-80020813 None:intergenic
TGATAGCAATCTTCAAAACT+AGG 0.409454 3_2:+80015677 Msa0428930:five_prime_UTR
ACAGTTGGCTTGACATCAAC+AGG 0.416226 3_2:-80022577 None:intergenic
GCTAGGATGCATCGGGAAAA+GGG 0.419663 3_2:+80020714 Msa0428930:intron
GGAACCAGGGCTTTGCTTCA+AGG 0.426853 3_2:-80020748 None:intergenic
TGATGATGGTGATGATACTA+TGG 0.427625 3_2:+80015801 Msa0428930:CDS
CCTGGCATGGGAGCTGCCTG+GGG 0.430763 3_2:+80021412 Msa0428930:CDS
GATATTCTTCATGTAGATAT+GGG 0.431370 3_2:+80023360 Msa0428930:three_prime_UTR
TTGTGCTGCTGGACTCTTAG+TGG 0.448234 3_2:+80023746 Msa0428930:three_prime_UTR
GCAATGCATGCGGCCTCATG+TGG 0.449902 3_2:+80021004 Msa0428930:CDS
CACAAAGTTCTTGGCCCAGC+TGG 0.449935 3_2:-80020982 None:intergenic
CTCTAGTTGGAATTCAGCAC+AGG 0.449996 3_2:+80020770 Msa0428930:CDS
CATGAAGAATATCCAACAAA+TGG 0.450396 3_2:-80023350 None:intergenic
TTGGTGGTGTGCTGAAGTTT+AGG 0.453013 3_2:+80023722 Msa0428930:three_prime_UTR
GTCAAGCCAACTGTTCTTGA+AGG 0.454609 3_2:+80022586 Msa0428930:CDS
GCAATGATATTAGACAGTTA+TGG 0.454625 3_2:+80023397 Msa0428930:three_prime_UTR
ACCTTCTGATGTGAGACATC+GGG 0.454747 3_2:-80015961 None:intergenic
ATTTCTTGCTAGGATGCATC+GGG 0.457873 3_2:+80020707 Msa0428930:intron
CTTTCTAATCCTTCAGATGC+AGG 0.461274 3_2:+80023231 Msa0428930:CDS
TACCAAGTAAATTCATTATG+TGG 0.461495 3_2:+80023310 Msa0428930:three_prime_UTR
TTAGACAACAGTCCATTTGT+TGG 0.462042 3_2:+80023338 Msa0428930:three_prime_UTR
AGCAAAATGACCAACCTTGT+TGG 0.463402 3_2:-80021028 None:intergenic
GGAGGAAGTGGTGCGCAGCC+AGG 0.464266 3_2:+80018119 Msa0428930:CDS
TCCTGTTGAGCAAAGTCGTC+TGG 0.466212 3_2:+80021675 Msa0428930:CDS
ACCTTCCGCACCAACAGTCT+TGG 0.467444 3_2:-80022740 None:intergenic
TTATTCTGCAATATTGATGC+TGG 0.472672 3_2:+80023505 Msa0428930:three_prime_UTR
ACCCACATAATGAATTTACT+TGG 0.475472 3_2:-80023312 None:intergenic
ATGGCAAACATAGCTTTGTA+TGG 0.476366 3_2:-80023882 None:intergenic
ATGAAGTGGTAATCCTATCA+AGG 0.480064 3_2:+80023452 Msa0428930:three_prime_UTR
TTAGACAGTTATGGGAAAGT+AGG 0.481758 3_2:+80023406 Msa0428930:three_prime_UTR
TACAACATCTAATCCACCAC+TGG 0.483254 3_2:-80021458 None:intergenic
ACCCTGTTACTCTGATCAAA+TGG 0.485919 3_2:-80018161 None:intergenic
TAATTTGAATATCAGTTTGG+TGG 0.486318 3_2:+80023706 Msa0428930:three_prime_UTR
GAAGAATAGCCTCCTTGGTC+AGG 0.487750 3_2:+80018310 Msa0428930:CDS
CAATGCGTCGCGGACCAGCT+GGG 0.490552 3_2:+80020968 Msa0428930:CDS
GAGTCTCGTTCTGAGTTCCT+TGG 0.493363 3_2:+80015649 Msa0428930:five_prime_UTR
TCAATATTGCAGAATAATGT+CGG 0.496407 3_2:-80023499 None:intergenic
TCCAAGACTGTTGGTGCGGA+AGG 0.498699 3_2:+80022739 Msa0428930:CDS
AAAGCCCTGGTTCCTCTAGT+TGG 0.498939 3_2:+80020757 Msa0428930:CDS
TGTGCTGCTGGACTCTTAGT+GGG 0.500062 3_2:+80023747 Msa0428930:three_prime_UTR
GAAATTTAGAGATAAAACTT+TGG 0.501624 3_2:+80023658 Msa0428930:three_prime_UTR
TTCACGAAGAATAGCCTCCT+TGG 0.502425 3_2:+80018305 Msa0428930:CDS
TGAGACAATGGTCCCTGGCA+TGG 0.505383 3_2:+80021399 Msa0428930:CDS
CGGCCTCATGTGGGCCAACA+AGG 0.505964 3_2:+80021014 Msa0428930:CDS
GAACCAGGGCTTTGCTTCAA+GGG 0.507428 3_2:-80020747 None:intergenic
TATTTCTTGCTAGGATGCAT+CGG 0.512222 3_2:+80020706 Msa0428930:intron
TTCGGAAAATGATGATGAGC+AGG 0.513065 3_2:+80022956 Msa0428930:CDS
GATAGCAATCTTCAAAACTA+GGG 0.513390 3_2:+80015678 Msa0428930:five_prime_UTR
TGATGTATAATTGCTTGACT+TGG 0.513708 3_2:+80023603 Msa0428930:three_prime_UTR
TTAGACATTCCTGCATCTGA+AGG 0.515486 3_2:-80023240 None:intergenic
GCTGCAGCTGCAACACGTAT+TGG 0.518862 3_2:+80015898 Msa0428930:CDS
AATTCCCCTTCAAGAACAGT+TGG 0.521168 3_2:-80022592 None:intergenic
TGGAATTCAGCACAGGGTGC+TGG 0.521463 3_2:+80020777 Msa0428930:CDS
GGTAATTCAGTGAACGTTGA+AGG 0.522137 3_2:+80015847 Msa0428930:CDS
CTCATGTGGGCCAACAAGGT+TGG 0.522969 3_2:+80021018 Msa0428930:CDS
GAGACAATGGTCCCTGGCAT+GGG 0.527922 3_2:+80021400 Msa0428930:CDS
TGTATGGAATAAAATAGATA+AGG 0.530458 3_2:-80023866 None:intergenic
CAATATTGCAGAATAATGTC+GGG 0.530929 3_2:-80023498 None:intergenic
TAATCCACCACTGGGTGTAA+GGG 0.531753 3_2:-80021449 None:intergenic
ATTGTTTACAGCTGAGACAA+TGG 0.531998 3_2:+80021387 Msa0428930:intron
TCTCTAAATTTCAGGTAGCA+AGG 0.533563 3_2:-80023647 None:intergenic
TCGTCGTCGTCATCAATAGC+TGG 0.535781 3_2:-80015763 None:intergenic
ATCAAATGGCAGTTCAGCTG+TGG 0.540344 3_2:-80018147 None:intergenic
GAAGAACCTTCCAAGACTGT+TGG 0.545293 3_2:+80022730 Msa0428930:CDS
GACACTCAGAGATCTCAGTA+AGG 0.560391 3_2:+80021639 Msa0428930:CDS
GCACAGGGTGCTGGTCAAGA+TGG 0.560830 3_2:+80020786 Msa0428930:CDS
CCCCGATGTCTCACATCAGA+AGG 0.563207 3_2:+80015960 Msa0428930:CDS
GCACCCTTGAAGCAAAGCCC+TGG 0.567134 3_2:+80020744 Msa0428930:CDS
ACTACAACTACCTCATCACC+AGG 0.568839 3_2:-80022784 None:intergenic
ACCAAGTAAATTCATTATGT+GGG 0.570836 3_2:+80023311 Msa0428930:three_prime_UTR
TCAAGCCAACTGTTCTTGAA+GGG 0.572288 3_2:+80022587 Msa0428930:CDS
TAGATACTCCGTGAGAAAAG+AGG 0.572399 3_2:+80018374 Msa0428930:CDS
TTAGGGGTCCATCCTTTGGA+TGG 0.577646 3_2:-80023686 None:intergenic
ATTTCAACTCTCTTCTATGG+CGG 0.579097 3_2:+80015705 Msa0428930:exon
CTCAGAGATCTCAGTAAGGG+TGG 0.581454 3_2:+80021643 Msa0428930:CDS
TGGTGATGCCATCCAAAGGA+TGG 0.582601 3_2:+80023678 Msa0428930:three_prime_UTR
CCCAGGCAGCTCCCATGCCA+GGG 0.582627 3_2:-80021411 None:intergenic
TGCAATCTCTAGGGCTTGGG+CGG 0.583296 3_2:+80018261 Msa0428930:intron
GAATTGGATGAAGAAACAAA+TGG 0.583383 3_2:+80015826 Msa0428930:CDS
TATGTAACAGCGAAATGAAG+TGG 0.583425 3_2:+80023438 Msa0428930:three_prime_UTR
AATCCACCACTGGGTGTAAG+GGG 0.585975 3_2:-80021448 None:intergenic
TACCTTCTGATGTGAGACAT+CGG 0.588691 3_2:-80015962 None:intergenic
GCAGGATCCTCAGATGGAAG+AGG 0.588835 3_2:-80015733 None:intergenic
CAACCTTGTTGGCCCACATG+AGG 0.589336 3_2:-80021017 None:intergenic
TGCATCAAACCCTGGTGATG+AGG 0.590145 3_2:+80022774 Msa0428930:CDS
GAATTCCAACTAGAGGAACC+AGG 0.591328 3_2:-80020762 None:intergenic
GGGATTAACTATAAAGCCCC+AGG 0.592871 3_2:-80021428 None:intergenic
AACACGATCCCAAACACTCA+AGG 0.596955 3_2:-80023573 None:intergenic
CAATGCATGCGGCCTCATGT+GGG 0.602828 3_2:+80021005 Msa0428930:CDS
ACAGCTGAGACAATGGTCCC+TGG 0.606434 3_2:+80021394 Msa0428930:intron
TGAAGTGGTAATCCTATCAA+GGG 0.608458 3_2:+80023453 Msa0428930:three_prime_UTR
TCAAATGGCAGTTCAGCTGT+GGG 0.609776 3_2:-80018146 None:intergenic
ATTGTTGCAGGATCCTCAGA+TGG 0.609966 3_2:-80015739 None:intergenic
TGATGACGACGACGACGATG+AGG 0.610620 3_2:+80015771 Msa0428930:CDS
ATGTCAATATCTGTATCTGA+AGG 0.610986 3_2:-80023264 None:intergenic
TCCGCACCAACAGTCTTGGA+AGG 0.612491 3_2:-80022736 None:intergenic
GGAACAACCTCTTCCATCTG+AGG 0.612918 3_2:+80015726 Msa0428930:CDS
GAAGAATGACAAATTACCAA+TGG 0.616321 3_2:-80022936 None:intergenic
GGATTAGAAAGCTCGACCAC+GGG 0.617309 3_2:-80023219 None:intergenic
CAAGCCAACTGTTCTTGAAG+GGG 0.619999 3_2:+80022588 Msa0428930:CDS
ACCTTCCAAGACTGTTGGTG+CGG 0.622461 3_2:+80022735 Msa0428930:CDS
CTAGGATGCATCGGGAAAAG+GGG 0.623092 3_2:+80020715 Msa0428930:intron
ATGTTCATATAAATAAACAC+TGG 0.628923 3_2:+80023822 Msa0428930:three_prime_UTR
AATCCCCTTACACCCAGTGG+TGG 0.629065 3_2:+80021445 Msa0428930:CDS
TGAGAAAAGAGGTGGCAGAA+AGG 0.629475 3_2:+80018385 Msa0428930:CDS
GATGAGGACTATACTGATGA+TGG 0.633851 3_2:+80015787 Msa0428930:CDS
AGAACTTTGTGCAATGCATG+CGG 0.636186 3_2:+80020994 Msa0428930:CDS
AGACGTAGATGTCAACATTG+TGG 0.641093 3_2:+80020922 Msa0428930:intron
AGGATTAGAAAGCTCGACCA+CGG 0.642905 3_2:-80023220 None:intergenic
AGTGGTAATCCTATCAAGGG+TGG 0.652646 3_2:+80023456 Msa0428930:three_prime_UTR
CAAACTGATATTCAAATTAG+GGG 0.655176 3_2:-80023702 None:intergenic
ACTTTGGTGATGCCATCCAA+AGG 0.657076 3_2:+80023674 Msa0428930:three_prime_UTR
ACAACATCTAATCCACCACT+GGG 0.660196 3_2:-80021457 None:intergenic
CTGTGCTGAATTCCAACTAG+AGG 0.664420 3_2:-80020769 None:intergenic
AATACTCCTGCAATGCGTCG+CGG 0.665782 3_2:+80020958 Msa0428930:CDS
ACACTCAGAGATCTCAGTAA+GGG 0.666946 3_2:+80021640 Msa0428930:CDS
TCTAGTTGGAATTCAGCACA+GGG 0.669194 3_2:+80020771 Msa0428930:CDS
ATACTCCGTGAGAAAAGAGG+TGG 0.671679 3_2:+80018377 Msa0428930:CDS
AATGATCATGCATCAAACCC+TGG 0.673623 3_2:+80022766 Msa0428930:CDS
AATTCCAACTAGAGGAACCA+GGG 0.673882 3_2:-80020761 None:intergenic
ATATGACCTACAGGAACCCG+TGG 0.688581 3_2:+80023203 Msa0428930:intron
CCTTCTGATGTGAGACATCG+GGG 0.689244 3_2:-80015960 None:intergenic
GTTGGCTTGACATCAACAGG+AGG 0.690482 3_2:-80022574 None:intergenic
TTGGCTTGACATCAACAGGA+GGG 0.707354 3_2:-80022573 None:intergenic
GCCATTTGATCAGAGTAACA+GGG 0.709466 3_2:+80018160 Msa0428930:CDS
CTACAACTACCTCATCACCA+GGG 0.715371 3_2:-80022783 None:intergenic
GTTAATCCCCTTACACCCAG+TGG 0.724772 3_2:+80021442 Msa0428930:CDS
TTCACGGTACCTGACCAAGG+AGG 0.733564 3_2:-80018319 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTACAAATTTAAATAC+AGG - chr3_2:80017997-80018016 None:intergenic 10.0%
!!! TAACTTATAACAATAATTTT+GGG - chr3_2:80018757-80018776 None:intergenic 10.0%
!!! ATAACTTATAACAATAATTT+TGG - chr3_2:80018758-80018777 None:intergenic 10.0%
!!! AAAAACTATGTTTTTTTATT+AGG + chr3_2:80019064-80019083 Msa0428930:intron 10.0%
!!! AAAACTATGTTTTTTTATTA+GGG + chr3_2:80019065-80019084 Msa0428930:intron 10.0%
!!! AATTTAAAACACTTATAAAA+TGG - chr3_2:80019911-80019930 None:intergenic 10.0%
!!! ATTTTGTTGTATAATATTAT+TGG + chr3_2:80020595-80020614 Msa0428930:intron 10.0%
!!! TTTATTCTTTTAATTCAATT+TGG + chr3_2:80022826-80022845 Msa0428930:intron 10.0%
!!! TTATTCTTTTAATTCAATTT+GGG + chr3_2:80022827-80022846 Msa0428930:intron 10.0%
!! ATACATAATCAAGAAAATTA+TGG + chr3_2:80016157-80016176 Msa0428930:intron 15.0%
!!! TAAGATTTTATGATTCAAAT+CGG - chr3_2:80016401-80016420 None:intergenic 15.0%
!!! ATTTTATTCATAAACTAAGA+CGG + chr3_2:80016868-80016887 Msa0428930:intron 15.0%
!! AGAATAATCAGTTTAAAAAT+AGG - chr3_2:80016972-80016991 None:intergenic 15.0%
!!! AAATTTGAAACAATTTACAA+TGG - chr3_2:80017903-80017922 None:intergenic 15.0%
!!! AAACTATGTTTTTTTATTAG+GGG + chr3_2:80019066-80019085 Msa0428930:intron 15.0%
!! ACAATGAATGTATTTATAAA+AGG - chr3_2:80019857-80019876 None:intergenic 15.0%
!! AATTGAGTTTACTTTAAATT+TGG - chr3_2:80020233-80020252 None:intergenic 15.0%
!! ATATATTCATTACAAACTAT+TGG + chr3_2:80021828-80021847 Msa0428930:intron 15.0%
!! TATATTCATTACAAACTATT+GGG + chr3_2:80021829-80021848 Msa0428930:intron 15.0%
!!! TATTTGAAAATGTTGATAAA+AGG - chr3_2:80022219-80022238 None:intergenic 15.0%
!!! CAAATAAACTTTTTTGAAAA+TGG + chr3_2:80022233-80022252 Msa0428930:intron 15.0%
!!! TATTCTTTTAATTCAATTTG+GGG + chr3_2:80022828-80022847 Msa0428930:intron 15.0%
!! AAAAAAAAAAAGAGAAGAAG+AGG + chr3_2:80015584-80015603 Msa0428930:five_prime_UTR 20.0%
!! TTGTTTATAGACTGAAAATT+AGG + chr3_2:80016191-80016210 Msa0428930:intron 20.0%
!! TGTTTCAAATCTTAACATAT+GGG + chr3_2:80016331-80016350 Msa0428930:intron 20.0%
!!! TAATCTTATTTTCGAAGAAT+CGG + chr3_2:80016476-80016495 Msa0428930:intron 20.0%
!!! ATTATTTCAAGTGTGATTTA+AGG + chr3_2:80016702-80016721 Msa0428930:intron 20.0%
!! TGATTATTCTTAAACTCAAA+AGG + chr3_2:80016982-80017001 Msa0428930:intron 20.0%
!! ATTGAAAATATCACTTCTAT+AGG + chr3_2:80017088-80017107 Msa0428930:intron 20.0%
!! AAGCTTTACACATAATAATT+TGG + chr3_2:80017377-80017396 Msa0428930:intron 20.0%
!! AGCTTTACACATAATAATTT+GGG + chr3_2:80017378-80017397 Msa0428930:intron 20.0%
!! AAAAAAGAAATATTGATGTC+TGG + chr3_2:80017407-80017426 Msa0428930:intron 20.0%
!! ACTGTAATTTACAAAAACAT+AGG + chr3_2:80017558-80017577 Msa0428930:intron 20.0%
!!! TATATTAGTTCTGTAAAAGT+AGG - chr3_2:80017639-80017658 None:intergenic 20.0%
!!! ACTATTTTGATTTTGATCAT+GGG - chr3_2:80017681-80017700 None:intergenic 20.0%
!!! AACTATTTTGATTTTGATCA+TGG - chr3_2:80017682-80017701 None:intergenic 20.0%
!!! AAATAAATCATCACTTTTTG+GGG - chr3_2:80018440-80018459 None:intergenic 20.0%
!!! GAAATAAATCATCACTTTTT+GGG - chr3_2:80018441-80018460 None:intergenic 20.0%
!!! AGAAATAAATCATCACTTTT+TGG - chr3_2:80018442-80018461 None:intergenic 20.0%
!!! GTTATTTAGAGTTTAAATAG+AGG + chr3_2:80019029-80019048 Msa0428930:intron 20.0%
!!! TCCATTTTTAATATTTGAAC+AGG + chr3_2:80019089-80019108 Msa0428930:intron 20.0%
!!! CCATTTTTAATATTTGAACA+GGG + chr3_2:80019090-80019109 Msa0428930:intron 20.0%
!!! TCTAGATATTTTAATGAACA+AGG - chr3_2:80019187-80019206 None:intergenic 20.0%
!!! TTTTAATACTATACTTGAAG+CGG - chr3_2:80019443-80019462 None:intergenic 20.0%
!! AAAAAATAATATGCTGAAAG+TGG + chr3_2:80019629-80019648 Msa0428930:intron 20.0%
!!! GTATAGATGTTATTTTCTTT+TGG + chr3_2:80019760-80019779 Msa0428930:intron 20.0%
!!! TAACAATATTTTATAGAGAC+CGG + chr3_2:80019972-80019991 Msa0428930:intron 20.0%
!!! TAAATCAGTGTTTTAAAAAC+CGG - chr3_2:80020095-80020114 None:intergenic 20.0%
!! TTCATTTCTACTTATGAATT+TGG + chr3_2:80020667-80020686 Msa0428930:intron 20.0%
!!! TATAGATCATCAATAACTTT+TGG + chr3_2:80021282-80021301 Msa0428930:intron 20.0%
!! ATCAGAAATACAAAGTAATA+AGG - chr3_2:80021523-80021542 None:intergenic 20.0%
!! TTCAAACTGGTTATTAAAAT+TGG - chr3_2:80021791-80021810 None:intergenic 20.0%
!!! ATTTTAAGTTGTTTTTAGAC+AGG + chr3_2:80021860-80021879 Msa0428930:intron 20.0%
!! GAAACATATTATCTTATCAA+TGG + chr3_2:80021887-80021906 Msa0428930:intron 20.0%
!! TCTATGACTTCATTAATAAA+AGG - chr3_2:80022073-80022092 None:intergenic 20.0%
!! TTAAGTTTAGTAGAAAACTT+GGG + chr3_2:80022380-80022399 Msa0428930:intron 20.0%
!! AAATTTCATTCAAGATGAAA+GGG - chr3_2:80022547-80022566 None:intergenic 20.0%
!!! CTATTTGCATAAAACTTTTA+TGG + chr3_2:80022689-80022708 Msa0428930:intron 20.0%
!!! ATTCTTTTAATTCAATTTGG+GGG + chr3_2:80022829-80022848 Msa0428930:intron 20.0%
!!! AAGTTTTATCTCTAAATTTC+AGG - chr3_2:80023658-80023677 None:intergenic 20.0%
!! GAAATTTAGAGATAAAACTT+TGG + chr3_2:80023658-80023677 Msa0428930:three_prime_UTR 20.0%
!! ATGTTCATATAAATAAACAC+TGG + chr3_2:80023822-80023841 Msa0428930:three_prime_UTR 20.0%
!! TGTATGGAATAAAATAGATA+AGG - chr3_2:80023869-80023888 None:intergenic 20.0%
!! ACGAGACTCAAATTTTTATT+CGG - chr3_2:80015638-80015657 None:intergenic 25.0%
! TATACATACATGCAACATAT+AGG - chr3_2:80016097-80016116 None:intergenic 25.0%
! ATATGTTGCATGTATGTATA+CGG + chr3_2:80016097-80016116 Msa0428930:intron 25.0%
!!! AAGACATGTTTTTTTGGATT+TGG + chr3_2:80016300-80016319 Msa0428930:intron 25.0%
! GTGTTTCAAATCTTAACATA+TGG + chr3_2:80016330-80016349 Msa0428930:intron 25.0%
! GTTATTTATTAGATTGCTGT+CGG + chr3_2:80016356-80016375 Msa0428930:intron 25.0%
! TTATTTATTAGATTGCTGTC+GGG + chr3_2:80016357-80016376 Msa0428930:intron 25.0%
! TGTGTACTATTAATTGCTAA+GGG - chr3_2:80016552-80016571 None:intergenic 25.0%
! TTTGGAAATGAAACAAAAGA+AGG - chr3_2:80016642-80016661 None:intergenic 25.0%
! AAATAAAATGCTTATAAGCG+TGG + chr3_2:80016836-80016855 Msa0428930:intron 25.0%
!! AAAACATCAAAACTCTTTTC+TGG - chr3_2:80017039-80017058 None:intergenic 25.0%
!! ATAATGTCTAAAATACAAGC+AGG - chr3_2:80017171-80017190 None:intergenic 25.0%
! TTAGACATTATTACTTCAGT+CGG + chr3_2:80017180-80017199 Msa0428930:intron 25.0%
!!! ACACATAATAATTTGGGTTT+TGG + chr3_2:80017384-80017403 Msa0428930:intron 25.0%
! TTTCCATCACATATTCTTTA+AGG + chr3_2:80017602-80017621 Msa0428930:intron 25.0%
! AATCCTTAAAGAATATGTGA+TGG - chr3_2:80017608-80017627 None:intergenic 25.0%
!! CACTTAATTTTCAATATCAG+AGG - chr3_2:80017711-80017730 None:intergenic 25.0%
! TGTAAGTTATTAGCAAATCT+TGG + chr3_2:80017737-80017756 Msa0428930:intron 25.0%
! GTAAGTTATTAGCAAATCTT+GGG + chr3_2:80017738-80017757 Msa0428930:intron 25.0%
! ACAATATATCTAAAAATGCG+TGG + chr3_2:80017857-80017876 Msa0428930:intron 25.0%
! CAATATATCTAAAAATGCGT+GGG + chr3_2:80017858-80017877 Msa0428930:intron 25.0%
! AACTCCATCAGTATAATATT+GGG + chr3_2:80018563-80018582 Msa0428930:intron 25.0%
!! ATTTTCTCATATTCTCAAGA+AGG - chr3_2:80018653-80018672 None:intergenic 25.0%
!! ATTTAGAGTTTAAATAGAGG+AGG + chr3_2:80019032-80019051 Msa0428930:intron 25.0%
! CCCTGTTCAAATATTAAAAA+TGG - chr3_2:80019093-80019112 None:intergenic 25.0%
!! AATTTTCTTGATCTCCTTAT+GGG - chr3_2:80019161-80019180 None:intergenic 25.0%
!! TAATTTTCTTGATCTCCTTA+TGG - chr3_2:80019162-80019181 None:intergenic 25.0%
! ACTATGAACCTACTAATAAA+AGG + chr3_2:80019242-80019261 Msa0428930:intron 25.0%
! CTATGAACCTACTAATAAAA+GGG + chr3_2:80019243-80019262 Msa0428930:intron 25.0%
!! TCAAAAACCCTTTTATTAGT+AGG - chr3_2:80019253-80019272 None:intergenic 25.0%
! TATAGTATTAAAAATCGCTC+TGG + chr3_2:80019450-80019469 Msa0428930:intron 25.0%
!! AACAATATTTTATAGAGACC+GGG + chr3_2:80019973-80019992 Msa0428930:intron 25.0%
!!! AAATCAGTGTTTTAAAAACC+GGG - chr3_2:80020094-80020113 None:intergenic 25.0%
! GGTTATTGATAAAGACTAAT+CGG - chr3_2:80020212-80020231 None:intergenic 25.0%
! CTACTTCATGAAAAAGTTTA+GGG - chr3_2:80020321-80020340 None:intergenic 25.0%
! ACTACTTCATGAAAAAGTTT+AGG - chr3_2:80020322-80020341 None:intergenic 25.0%
! ATTATAATGTAAGTTGCATC+TGG + chr3_2:80020380-80020399 Msa0428930:intron 25.0%
!! TTTGACTTAATATTGAGTAG+AGG + chr3_2:80020489-80020508 Msa0428930:intron 25.0%
!!! AATATTATTGGCTCCTTTAA+AGG + chr3_2:80020607-80020626 Msa0428930:intron 25.0%
! AAATCAGACAAAACCTTTAA+AGG - chr3_2:80020623-80020642 None:intergenic 25.0%
!! ATTATCTCTTATTTCTTGCT+AGG + chr3_2:80020697-80020716 Msa0428930:intron 25.0%
!!! TCTGTGAGTTTTAAACATAT+TGG + chr3_2:80020827-80020846 Msa0428930:intron 25.0%
! TTGTCATTCATTATCTTTCA+TGG + chr3_2:80021354-80021373 Msa0428930:intron 25.0%
! TCAGCTGTAAACAATAAAAA+TGG - chr3_2:80021382-80021401 None:intergenic 25.0%
!!! AGATGTTGTATTTTGACTAT+AGG + chr3_2:80021471-80021490 Msa0428930:intron 25.0%
!! ATTTGCAATTGGCTTAATAA+AGG - chr3_2:80021741-80021760 None:intergenic 25.0%
! AAACTGGTTATTAAAATTGG+AGG - chr3_2:80021788-80021807 None:intergenic 25.0%
!! ATAACCAGTTTGAAATCAAA+TGG + chr3_2:80021797-80021816 Msa0428930:intron 25.0%
!! AAAACCATTTGATTTCAAAC+TGG - chr3_2:80021804-80021823 None:intergenic 25.0%
!!! AGTTTGAAATCAAATGGTTT+TGG + chr3_2:80021803-80021822 Msa0428930:intron 25.0%
! TAAGAGAGAATAATACAAGT+TGG + chr3_2:80021966-80021985 Msa0428930:intron 25.0%
! TGTAAAAATCCCATGAAATA+AGG + chr3_2:80022098-80022117 Msa0428930:intron 25.0%
! ATGAACTAATTACCTGTTTA+TGG + chr3_2:80022261-80022280 Msa0428930:intron 25.0%
! GTTAAGTTTAGTAGAAAACT+TGG + chr3_2:80022379-80022398 Msa0428930:intron 25.0%
! CAAATTTCATTCAAGATGAA+AGG - chr3_2:80022548-80022567 None:intergenic 25.0%
!! ATTGGTAATTTGTCATTCTT+CGG + chr3_2:80022938-80022957 Msa0428930:CDS 25.0%
! TACCAAGTAAATTCATTATG+TGG + chr3_2:80023310-80023329 Msa0428930:three_prime_UTR 25.0%
! ACCAAGTAAATTCATTATGT+GGG + chr3_2:80023311-80023330 Msa0428930:three_prime_UTR 25.0%
! GATATTCTTCATGTAGATAT+GGG + chr3_2:80023360-80023379 Msa0428930:three_prime_UTR 25.0%
! CAATGATATTAGACAGTTAT+GGG + chr3_2:80023398-80023417 Msa0428930:three_prime_UTR 25.0%
! TCAATATTGCAGAATAATGT+CGG - chr3_2:80023502-80023521 None:intergenic 25.0%
! CAAACTGATATTCAAATTAG+GGG - chr3_2:80023705-80023724 None:intergenic 25.0%
! CCAAACTGATATTCAAATTA+GGG - chr3_2:80023706-80023725 None:intergenic 25.0%
! ACCAAACTGATATTCAAATT+AGG - chr3_2:80023707-80023726 None:intergenic 25.0%
! TAATTTGAATATCAGTTTGG+TGG + chr3_2:80023706-80023725 Msa0428930:three_prime_UTR 25.0%
! AGATTGCTATCAATTTTCCA+AGG - chr3_2:80015669-80015688 None:intergenic 30.0%
TGATAGCAATCTTCAAAACT+AGG + chr3_2:80015677-80015696 Msa0428930:five_prime_UTR 30.0%
GATAGCAATCTTCAAAACTA+GGG + chr3_2:80015678-80015697 Msa0428930:five_prime_UTR 30.0%
TTCATTTCAACTCTCTTCTA+TGG + chr3_2:80015702-80015721 Msa0428930:exon 30.0%
TGATGATACTATGGATGAAT+TGG + chr3_2:80015810-80015829 Msa0428930:CDS 30.0%
GAATTGGATGAAGAAACAAA+TGG + chr3_2:80015826-80015845 Msa0428930:CDS 30.0%
GTGTGTACTATTAATTGCTA+AGG - chr3_2:80016553-80016572 None:intergenic 30.0%
!!! CATGAGAGTTTTAAGTCATT+TGG - chr3_2:80016660-80016679 None:intergenic 30.0%
AAACTAAGACGGTGTAATAA+TGG + chr3_2:80016879-80016898 Msa0428930:intron 30.0%
AACTAAGACGGTGTAATAAT+GGG + chr3_2:80016880-80016899 Msa0428930:intron 30.0%
TGTAAAGGTTGTAATGTCAA+AGG + chr3_2:80016913-80016932 Msa0428930:intron 30.0%
! TGATGTTTTGTAGAGTTGTA+AGG + chr3_2:80017050-80017069 Msa0428930:intron 30.0%
! ATATTTTCAATGCAGAGAGA+TGG - chr3_2:80017079-80017098 None:intergenic 30.0%
TACAAACACCAGATATGATA+TGG - chr3_2:80017217-80017236 None:intergenic 30.0%
TCTACTTTAATTGTCTTGCT+TGG + chr3_2:80017260-80017279 Msa0428930:intron 30.0%
AGAAATATTGATGTCTGGTA+AGG + chr3_2:80017412-80017431 Msa0428930:intron 30.0%
! GTTACGATATTCTTGTTTGA+CGG - chr3_2:80017510-80017529 None:intergenic 30.0%
TGAACTATGCAGAGAAATTA+GGG - chr3_2:80017535-80017554 None:intergenic 30.0%
ATGAACTATGCAGAGAAATT+AGG - chr3_2:80017536-80017555 None:intergenic 30.0%
! GTCAAAGTATTTGTATGACT+TGG + chr3_2:80017776-80017795 Msa0428930:intron 30.0%
AATGGAAAACTGTGATTAGT+TGG - chr3_2:80017885-80017904 None:intergenic 30.0%
CTAATCACAGATGAATTGAA+TGG + chr3_2:80017930-80017949 Msa0428930:intron 30.0%
GAAGAAATATTTGTAGCATG+TGG + chr3_2:80017952-80017971 Msa0428930:intron 30.0%
TTGTAATTTACTTCTTGACC+TGG + chr3_2:80018007-80018026 Msa0428930:intron 30.0%
!! ATGATTGAAGGTTTTGCTAT+TGG + chr3_2:80018040-80018059 Msa0428930:intron 30.0%
!!! TGATTGAAGGTTTTGCTATT+GGG + chr3_2:80018041-80018060 Msa0428930:intron 30.0%
CTGATAAAATTTCACATTGC+AGG + chr3_2:80018073-80018092 Msa0428930:intron 30.0%
TTATGCTTGCATTTGTGAAT+TGG + chr3_2:80018234-80018253 Msa0428930:intron 30.0%
TCTAGATCTACAATTTGTAC+AGG + chr3_2:80018459-80018478 Msa0428930:intron 30.0%
CAACTCCATCAGTATAATAT+TGG + chr3_2:80018562-80018581 Msa0428930:intron 30.0%
ACTACCCAATATTATACTGA+TGG - chr3_2:80018570-80018589 None:intergenic 30.0%
AATTTAATAGAGCTTCCGAA+AGG + chr3_2:80018678-80018697 Msa0428930:intron 30.0%
! AATTTTCAAATCTGTCGCTA+TGG + chr3_2:80018796-80018815 Msa0428930:intron 30.0%
!! AAAAAACAAAAGTATCCCGA+GGG - chr3_2:80018873-80018892 None:intergenic 30.0%
! ACTCTTTTATGTTAGTTACG+AGG + chr3_2:80018991-80019010 Msa0428930:intron 30.0%
! TTTTATGTTAGTTACGAGGA+TGG + chr3_2:80018995-80019014 Msa0428930:intron 30.0%
AACTATGCTTTAGTGATTAG+TGG + chr3_2:80019206-80019225 Msa0428930:intron 30.0%
AGACCTATTATTCTTGCAAA+TGG + chr3_2:80019286-80019305 Msa0428930:intron 30.0%
TCTCCATTTGCAAGAATAAT+AGG - chr3_2:80019292-80019311 None:intergenic 30.0%
! ACTTTTACTATGACAAGACA+AGG - chr3_2:80019334-80019353 None:intergenic 30.0%
!!! TTGTTAGTTTTGAAACTCCA+CGG + chr3_2:80019360-80019379 Msa0428930:intron 30.0%
ATTTCTGTAATTGTTAACCG+TGG - chr3_2:80019380-80019399 None:intergenic 30.0%
TTGCACTAGAATCGAATATA+CGG + chr3_2:80019653-80019672 Msa0428930:intron 30.0%
CATAATTGAACTTGAAGACT+CGG - chr3_2:80020007-80020026 None:intergenic 30.0%
! AGTCTTCAAGTTCAATTATG+AGG + chr3_2:80020007-80020026 Msa0428930:intron 30.0%
TCAATTGTCGTATAGATAAG+AGG + chr3_2:80020405-80020424 Msa0428930:intron 30.0%
ATAGATAAGAGGATTCATGT+TGG + chr3_2:80020416-80020435 Msa0428930:intron 30.0%
TAGATAAGAGGATTCATGTT+GGG + chr3_2:80020417-80020436 Msa0428930:intron 30.0%
AGCAACTTAAATAAAGAGTG+AGG + chr3_2:80020534-80020553 Msa0428930:intron 30.0%
GCAACTTAAATAAAGAGTGA+GGG + chr3_2:80020535-80020554 Msa0428930:intron 30.0%
! TTTAAAACTCACAGAGATTC+AGG - chr3_2:80020822-80020841 None:intergenic 30.0%
!! TAAACATATTGGTTCTTGTG+TGG + chr3_2:80020838-80020857 Msa0428930:intron 30.0%
!! AAACATATTGGTTCTTGTGT+GGG + chr3_2:80020839-80020858 Msa0428930:intron 30.0%
!!! TATGGTTTTGATGAAATGCT+TGG + chr3_2:80021057-80021076 Msa0428930:CDS 30.0%
!!! ATTTTGACTATAGGACATGT+TGG + chr3_2:80021480-80021499 Msa0428930:intron 30.0%
!!! AAGTTGTTTTTAGACAGGAA+AGG + chr3_2:80021865-80021884 Msa0428930:intron 30.0%
ATCTTAGATTCTTTAGTCAC+AGG + chr3_2:80022006-80022025 Msa0428930:intron 30.0%
! ACTGTGATACCTTATTTCAT+GGG - chr3_2:80022110-80022129 None:intergenic 30.0%
TGACAATCAAAACCATAAAC+AGG - chr3_2:80022276-80022295 None:intergenic 30.0%
AAATTTCCTGTAGTTCTTTG+TGG + chr3_2:80022332-80022351 Msa0428930:intron 30.0%
AAGGCTGTTCAAAAATAAAC+TGG - chr3_2:80022472-80022491 None:intergenic 30.0%
TCATCTTGAATGAAATTTGC+AGG + chr3_2:80022549-80022568 Msa0428930:intron 30.0%
! AAAACTTTTATGGTGTGTTC+AGG + chr3_2:80022699-80022718 Msa0428930:intron 30.0%
! AAACTTTTATGGTGTGTTCA+GGG + chr3_2:80022700-80022719 Msa0428930:intron 30.0%
!!! TTTTCTCTGGTATTGACAAA+TGG + chr3_2:80022862-80022881 Msa0428930:intron 30.0%
!! TTTCTCTGGTATTGACAAAT+GGG + chr3_2:80022863-80022882 Msa0428930:intron 30.0%
GAAGAATGACAAATTACCAA+TGG - chr3_2:80022939-80022958 None:intergenic 30.0%
! TTTGAGTTTCTTCTTACATG+AGG + chr3_2:80023177-80023196 Msa0428930:intron 30.0%
ATGTCAATATCTGTATCTGA+AGG - chr3_2:80023267-80023286 None:intergenic 30.0%
ACCCACATAATGAATTTACT+TGG - chr3_2:80023315-80023334 None:intergenic 30.0%
CATGAAGAATATCCAACAAA+TGG - chr3_2:80023353-80023372 None:intergenic 30.0%
GGATATTCTTCATGTAGATA+TGG + chr3_2:80023359-80023378 Msa0428930:three_prime_UTR 30.0%
GCAATGATATTAGACAGTTA+TGG + chr3_2:80023397-80023416 Msa0428930:three_prime_UTR 30.0%
CAATATTGCAGAATAATGTC+GGG - chr3_2:80023501-80023520 None:intergenic 30.0%
TTATTCTGCAATATTGATGC+TGG + chr3_2:80023505-80023524 Msa0428930:three_prime_UTR 30.0%
ATAATCTTCCTTGAGTGTTT+GGG + chr3_2:80023565-80023584 Msa0428930:three_prime_UTR 30.0%
TGATGTATAATTGCTTGACT+TGG + chr3_2:80023603-80023622 Msa0428930:three_prime_UTR 30.0%
CCCTAATTTGAATATCAGTT+TGG + chr3_2:80023703-80023722 Msa0428930:three_prime_UTR 30.0%
ATTTCAACTCTCTTCTATGG+CGG + chr3_2:80015705-80015724 Msa0428930:exon 35.0%
!! TGATGATGGTGATGATACTA+TGG + chr3_2:80015801-80015820 Msa0428930:CDS 35.0%
! GAACTCACTCTTTCTTTTGA+AGG + chr3_2:80015922-80015941 Msa0428930:CDS 35.0%
!!! ACGCGTAAGACATGTTTTTT+TGG + chr3_2:80016294-80016313 Msa0428930:intron 35.0%
CAATCACTTAATCACACTGA+GGG - chr3_2:80016444-80016463 None:intergenic 35.0%
TCAATCACTTAATCACACTG+AGG - chr3_2:80016445-80016464 None:intergenic 35.0%
!!! TCTTATTTTCGAAGAATCGG+TGG + chr3_2:80016479-80016498 Msa0428930:intron 35.0%
ATGAAACAAAAGAAGGACGA+GGG - chr3_2:80016635-80016654 None:intergenic 35.0%
AATGAAACAAAAGAAGGACG+AGG - chr3_2:80016636-80016655 None:intergenic 35.0%
! AATCTCGATTTTACCTACCT+TGG + chr3_2:80016792-80016811 Msa0428930:intron 35.0%
TACAAAATCCTAACCAAGGT+AGG - chr3_2:80016808-80016827 None:intergenic 35.0%
GTGTTACAAAATCCTAACCA+AGG - chr3_2:80016812-80016831 None:intergenic 35.0%
! ATTGTCTTGCTTGGTAGTAT+AGG + chr3_2:80017269-80017288 Msa0428930:intron 35.0%
! TTGTCTTGCTTGGTAGTATA+GGG + chr3_2:80017270-80017289 Msa0428930:intron 35.0%
ATGGATCTCATTGTCATCAA+TGG + chr3_2:80017296-80017315 Msa0428930:intron 35.0%
AAGTTGACGTAAAAGCTCTA+TGG + chr3_2:80017344-80017363 Msa0428930:intron 35.0%
! CGTAAAAGCTCTATGGATTT+TGG + chr3_2:80017351-80017370 Msa0428930:intron 35.0%
! AAAAGCTCTATGGATTTTGG+TGG + chr3_2:80017354-80017373 Msa0428930:intron 35.0%
TATGAATAGGTGAATAGCTC+AGG + chr3_2:80017446-80017465 Msa0428930:intron 35.0%
!!! GATTGAAGGTTTTGCTATTG+GGG + chr3_2:80018042-80018061 Msa0428930:intron 35.0%
!!! CAAGCTGTTTTGCTGTTTTT+GGG + chr3_2:80018098-80018117 Msa0428930:CDS 35.0%
GCTATTCTTCGTGAAAGATT+TGG - chr3_2:80018300-80018319 None:intergenic 35.0%
! ATCTTTCCTTGCGTTTTTCA+CGG - chr3_2:80018338-80018357 None:intergenic 35.0%
!!! CATCACTTTTTGGGGTAATA+GGG - chr3_2:80018432-80018451 None:intergenic 35.0%
!!! TCATCACTTTTTGGGGTAAT+AGG - chr3_2:80018433-80018452 None:intergenic 35.0%
! ACAATAATTTTGGGCCAACA+AGG - chr3_2:80018748-80018767 None:intergenic 35.0%
AACAAACTACATTCGTTCAC+TGG - chr3_2:80018823-80018842 None:intergenic 35.0%
!! CAAAAAACAAAAGTATCCCG+AGG - chr3_2:80018874-80018893 None:intergenic 35.0%
! GCAATTTGCTTTAACCCATA+AGG + chr3_2:80019144-80019163 Msa0428930:intron 35.0%
!!! AAGGGTTTTTGAGACTTAAC+TGG + chr3_2:80019261-80019280 Msa0428930:intron 35.0%
GAATTTGACCTGTCAAAGTT+TGG + chr3_2:80019527-80019546 Msa0428930:intron 35.0%
GAGTTTAACCAAACTTTGAC+AGG - chr3_2:80019538-80019557 None:intergenic 35.0%
!! ATTGACTTGGTAAGGGTATT+TGG - chr3_2:80020065-80020084 None:intergenic 35.0%
! ATCCTTTTTGTAAGACTGCT+TGG - chr3_2:80020270-80020289 None:intergenic 35.0%
TATTTCTTGCTAGGATGCAT+CGG + chr3_2:80020706-80020725 Msa0428930:intron 35.0%
!! GGTCATTTTGCTAACAAGTA+TGG + chr3_2:80021039-80021058 Msa0428930:CDS 35.0%
! CACAATTATTTTCCAGTAGC+TGG + chr3_2:80021113-80021132 Msa0428930:intron 35.0%
!!! AGACTGGGTGTTGTTTTTTT+GGG - chr3_2:80021177-80021196 None:intergenic 35.0%
!!! AAGACTGGGTGTTGTTTTTT+TGG - chr3_2:80021178-80021197 None:intergenic 35.0%
AAAAACAACACCCAGTCTTT+CGG + chr3_2:80021179-80021198 Msa0428930:intron 35.0%
ATTGTTTACAGCTGAGACAA+TGG + chr3_2:80021387-80021406 Msa0428930:intron 35.0%
AGAATGCAACAAACAAGTAC+AGG - chr3_2:80021547-80021566 None:intergenic 35.0%
TCTGCTTCTTAACTCTGATA+GGG + chr3_2:80021616-80021635 Msa0428930:intron 35.0%
! CACTGTGATACCTTATTTCA+TGG - chr3_2:80022111-80022130 None:intergenic 35.0%
! GAAATAAGGTATCACAGTGA+AGG + chr3_2:80022112-80022131 Msa0428930:intron 35.0%
!! TTTTGATTGTCACGAAGAGA+TGG + chr3_2:80022284-80022303 Msa0428930:intron 35.0%
AATCTTCCACAAAGAACTAC+AGG - chr3_2:80022341-80022360 None:intergenic 35.0%
!!! TCAAGATGAAAGGGTGTTTT+AGG - chr3_2:80022538-80022557 None:intergenic 35.0%
TGACAAATGGGTATTTGTTC+AGG + chr3_2:80022875-80022894 Msa0428930:intron 35.0%
TTTGCCGATGAAACTTGAAA+TGG + chr3_2:80023087-80023106 Msa0428930:intron 35.0%
!! AGCTCCATTTCAAGTTTCAT+CGG - chr3_2:80023094-80023113 None:intergenic 35.0%
GATACAGATATTGACATTCC+TGG + chr3_2:80023270-80023289 Msa0428930:CDS 35.0%
TCCTGGAAACTTTGATTAGA+AGG + chr3_2:80023287-80023306 Msa0428930:exon 35.0%
ACCTTCTAATCAAAGTTTCC+AGG - chr3_2:80023291-80023310 None:intergenic 35.0%
TTAGACAACAGTCCATTTGT+TGG + chr3_2:80023338-80023357 Msa0428930:three_prime_UTR 35.0%
TTAGACAGTTATGGGAAAGT+AGG + chr3_2:80023406-80023425 Msa0428930:three_prime_UTR 35.0%
TATGTAACAGCGAAATGAAG+TGG + chr3_2:80023438-80023457 Msa0428930:three_prime_UTR 35.0%
ATGAAGTGGTAATCCTATCA+AGG + chr3_2:80023452-80023471 Msa0428930:three_prime_UTR 35.0%
TGAAGTGGTAATCCTATCAA+GGG + chr3_2:80023453-80023472 Msa0428930:three_prime_UTR 35.0%
GATAATCTTCCTTGAGTGTT+TGG + chr3_2:80023564-80023583 Msa0428930:three_prime_UTR 35.0%
! TCTCTAAATTTCAGGTAGCA+AGG - chr3_2:80023650-80023669 None:intergenic 35.0%
! GTCACTCGTGAATTTTGTCT+CGG - chr3_2:80015610-80015629 None:intergenic 40.0%
TCAATAGCTGGAATTGTTGC+AGG - chr3_2:80015754-80015773 None:intergenic 40.0%
GATGAGGACTATACTGATGA+TGG + chr3_2:80015787-80015806 Msa0428930:CDS 40.0%
GGTAATTCAGTGAACGTTGA+AGG + chr3_2:80015847-80015866 Msa0428930:CDS 40.0%
TACCTTCTGATGTGAGACAT+CGG - chr3_2:80015965-80015984 None:intergenic 40.0%
! CGATTTTACCTACCTTGGTT+AGG + chr3_2:80016797-80016816 Msa0428930:intron 40.0%
! GTGTAATAATGGGACTGTTG+TGG + chr3_2:80016890-80016909 Msa0428930:intron 40.0%
GTCCATGTCCATATCATATC+TGG + chr3_2:80017206-80017225 Msa0428930:intron 40.0%
CACCAGATATGATATGGACA+TGG - chr3_2:80017211-80017230 None:intergenic 40.0%
! GCTTGGTAGTATAGGGATTA+TGG + chr3_2:80017277-80017296 Msa0428930:intron 40.0%
CATTGTCATCAATGGCTGTT+TGG + chr3_2:80017304-80017323 Msa0428930:intron 40.0%
GGCTTACGAACGATATGAAT+AGG + chr3_2:80017433-80017452 Msa0428930:intron 40.0%
ATACTTTGACCGTTGTGTCA+AGG - chr3_2:80017766-80017785 None:intergenic 40.0%
GAAGTCACAGATTGAAGTCA+TGG + chr3_2:80017798-80017817 Msa0428930:intron 40.0%
CCTTACTTTGCAATTGCAAG+AGG - chr3_2:80017831-80017850 None:intergenic 40.0%
CCTCTTGCAATTGCAAAGTA+AGG + chr3_2:80017828-80017847 Msa0428930:intron 40.0%
TTACTTCTTGACCTGGCAAA+AGG + chr3_2:80018014-80018033 Msa0428930:intron 40.0%
! TCAATCATTGTCCTTTTGCC+AGG - chr3_2:80018028-80018047 None:intergenic 40.0%
GGCAAAAGGACAATGATTGA+AGG + chr3_2:80018028-80018047 Msa0428930:intron 40.0%
!!! GCAAGCTGTTTTGCTGTTTT+TGG + chr3_2:80018097-80018116 Msa0428930:CDS 40.0%
! TGCCATTTGATCAGAGTAAC+AGG + chr3_2:80018159-80018178 Msa0428930:CDS 40.0%
GCCATTTGATCAGAGTAACA+GGG + chr3_2:80018160-80018179 Msa0428930:CDS 40.0%
ACCCTGTTACTCTGATCAAA+TGG - chr3_2:80018164-80018183 None:intergenic 40.0%
! AATTGGTTCCTGCAATCTCT+AGG + chr3_2:80018251-80018270 Msa0428930:intron 40.0%
! ATTGGTTCCTGCAATCTCTA+GGG + chr3_2:80018252-80018271 Msa0428930:intron 40.0%
TAGATACTCCGTGAGAAAAG+AGG + chr3_2:80018374-80018393 Msa0428930:CDS 40.0%
TACTGATGGAGTTGACATCT+TGG - chr3_2:80018556-80018575 None:intergenic 40.0%
TAAAGCAAATTGCGTGTCCA+AGG - chr3_2:80019137-80019156 None:intergenic 40.0%
AAAATCGCTCTGGTAAAACC+AGG + chr3_2:80019460-80019479 Msa0428930:intron 40.0%
GCCTAATATTGTGATTGGAC+CGG - chr3_2:80019500-80019519 None:intergenic 40.0%
GAGCAGCCTAATATTGTGAT+TGG - chr3_2:80019505-80019524 None:intergenic 40.0%
TGATAACATCAACAAGCAGC+AGG - chr3_2:80019715-80019734 None:intergenic 40.0%
!! TTTTTAGCGACAAAGTCAGC+TGG + chr3_2:80019929-80019948 Msa0428930:intron 40.0%
AGGTTAATCCAGTGATCAAG+TGG + chr3_2:80020027-80020046 Msa0428930:intron 40.0%
!! TGGTAAGGGTATTTGGTCAT+TGG - chr3_2:80020058-80020077 None:intergenic 40.0%
!! GTTGGTGATTGACTTGGTAA+GGG - chr3_2:80020072-80020091 None:intergenic 40.0%
!!! CAGTGTTTTAAAAACCGGGT+TGG - chr3_2:80020090-80020109 None:intergenic 40.0%
ACCTGTGGTAAGACTTGATT+GGG - chr3_2:80020163-80020182 None:intergenic 40.0%
TATATAGCCAATCTCACCTG+TGG - chr3_2:80020178-80020197 None:intergenic 40.0%
GTCCAAGCAGTCTTACAAAA+AGG + chr3_2:80020265-80020284 Msa0428930:intron 40.0%
ATTTCTTGCTAGGATGCATC+GGG + chr3_2:80020707-80020726 Msa0428930:intron 40.0%
AATTCCAACTAGAGGAACCA+GGG - chr3_2:80020764-80020783 None:intergenic 40.0%
TCTAGTTGGAATTCAGCACA+GGG + chr3_2:80020771-80020790 Msa0428930:CDS 40.0%
ACTCACAGAGATTCAGGATT+AGG - chr3_2:80020816-80020835 None:intergenic 40.0%
ACAATGTTGACATCTACGTC+TGG - chr3_2:80020923-80020942 None:intergenic 40.0%
AGACGTAGATGTCAACATTG+TGG + chr3_2:80020922-80020941 Msa0428930:intron 40.0%
CATGCATTGCACAAAGTTCT+TGG - chr3_2:80020994-80021013 None:intergenic 40.0%
AGAACTTTGTGCAATGCATG+CGG + chr3_2:80020994-80021013 Msa0428930:CDS 40.0%
AGCAAAATGACCAACCTTGT+TGG - chr3_2:80021031-80021050 None:intergenic 40.0%
! TATTTTCCAGTAGCTGGAGT+TGG + chr3_2:80021119-80021138 Msa0428930:intron 40.0%
GATGACAAATCCGAAAGACT+GGG - chr3_2:80021192-80021211 None:intergenic 40.0%
AGATGACAAATCCGAAAGAC+TGG - chr3_2:80021193-80021212 None:intergenic 40.0%
AGAAGAGTAGCAGAAGTTGA+AGG - chr3_2:80021315-80021334 None:intergenic 40.0%
ACAACATCTAATCCACCACT+GGG - chr3_2:80021460-80021479 None:intergenic 40.0%
TACAACATCTAATCCACCAC+TGG - chr3_2:80021461-80021480 None:intergenic 40.0%
GTCTGCTTCTTAACTCTGAT+AGG + chr3_2:80021615-80021634 Msa0428930:intron 40.0%
CTGCTTCTTAACTCTGATAG+GGG + chr3_2:80021617-80021636 Msa0428930:intron 40.0%
ACACTCAGAGATCTCAGTAA+GGG + chr3_2:80021640-80021659 Msa0428930:CDS 40.0%
AGCCAATTGCAAATGCTAAG+TGG + chr3_2:80021747-80021766 Msa0428930:intron 40.0%
GCCAATTGCAAATGCTAAGT+GGG + chr3_2:80021748-80021767 Msa0428930:intron 40.0%
TCCCACTTAGCATTTGCAAT+TGG - chr3_2:80021752-80021771 None:intergenic 40.0%
TTTGAACAGCCTTACCTTTG+TGG + chr3_2:80022479-80022498 Msa0428930:intron 40.0%
TGAAAGAACTTGAGCCACAA+AGG - chr3_2:80022496-80022515 None:intergenic 40.0%
!!! ATGAAAGGGTGTTTTAGGAC+TGG - chr3_2:80022533-80022552 None:intergenic 40.0%
TCAAGCCAACTGTTCTTGAA+GGG + chr3_2:80022587-80022606 Msa0428930:CDS 40.0%
AATTCCCCTTCAAGAACAGT+TGG - chr3_2:80022595-80022614 None:intergenic 40.0%
AATGATCATGCATCAAACCC+TGG + chr3_2:80022766-80022785 Msa0428930:CDS 40.0%
!! CCAATGGCAGTGTTTTTGTT+AGG - chr3_2:80022923-80022942 None:intergenic 40.0%
CCTAACAAAAACACTGCCAT+TGG + chr3_2:80022920-80022939 Msa0428930:CDS 40.0%
! TTCGGAAAATGATGATGAGC+AGG + chr3_2:80022956-80022975 Msa0428930:CDS 40.0%
TTCATCGGCAAAGTTCAAGT+GGG - chr3_2:80023079-80023098 None:intergenic 40.0%
TTTCATCGGCAAAGTTCAAG+TGG - chr3_2:80023080-80023099 None:intergenic 40.0%
TCTTGCGTTTACAAGTGTAC+TGG - chr3_2:80023118-80023137 None:intergenic 40.0%
ATGAGGCTTATATGACCTAC+AGG + chr3_2:80023194-80023213 Msa0428930:intron 40.0%
CTTTCTAATCCTTCAGATGC+AGG + chr3_2:80023231-80023250 Msa0428930:CDS 40.0%
TTAGACATTCCTGCATCTGA+AGG - chr3_2:80023243-80023262 None:intergenic 40.0%
ATTGTTGCAGGATCCTCAGA+TGG - chr3_2:80015742-80015761 None:intergenic 45.0%
!! CACTCTTTCTTTTGAAGGCG+AGG + chr3_2:80015927-80015946 Msa0428930:CDS 45.0%
ACCTTCTGATGTGAGACATC+GGG - chr3_2:80015964-80015983 None:intergenic 45.0%
TTAGATTGCTGTCGGGATCA+TGG + chr3_2:80016364-80016383 Msa0428930:intron 45.0%
ATGGGACTGTTGTGGTGTAA+AGG + chr3_2:80016898-80016917 Msa0428930:intron 45.0%
TCTTGGGAACCTTGACACAA+CGG + chr3_2:80017754-80017773 Msa0428930:intron 45.0%
!!! GCTGTTTTGCTGTTTTTGGG+AGG + chr3_2:80018101-80018120 Msa0428930:CDS 45.0%
!!! TTGCTGTTTTTGGGAGGAAG+TGG + chr3_2:80018107-80018126 Msa0428930:CDS 45.0%
TCAAATGGCAGTTCAGCTGT+GGG - chr3_2:80018149-80018168 None:intergenic 45.0%
ATCAAATGGCAGTTCAGCTG+TGG - chr3_2:80018150-80018169 None:intergenic 45.0%
TTCACGAAGAATAGCCTCCT+TGG + chr3_2:80018305-80018324 Msa0428930:CDS 45.0%
! TTTTTCACGGTACCTGACCA+AGG - chr3_2:80018325-80018344 None:intergenic 45.0%
ATACTCCGTGAGAAAAGAGG+TGG + chr3_2:80018377-80018396 Msa0428930:CDS 45.0%
! TTCTGCCACCTCTTTTCTCA+CGG - chr3_2:80018385-80018404 None:intergenic 45.0%
TGAGAAAAGAGGTGGCAGAA+AGG + chr3_2:80018385-80018404 Msa0428930:CDS 45.0%
TATCCCGAGGGAATCAAACA+CGG - chr3_2:80018861-80018880 None:intergenic 45.0%
GCCGGTCCAATCACAATATT+AGG + chr3_2:80019496-80019515 Msa0428930:intron 45.0%
AGTGGCAGAAAACTGCATTG+TGG - chr3_2:80019689-80019708 None:intergenic 45.0%
! CAAAGTCAGCTGGCTTAATC+TGG + chr3_2:80019939-80019958 Msa0428930:intron 45.0%
TGGTTGAACCACTTGATCAC+TGG - chr3_2:80020038-80020057 None:intergenic 45.0%
!! GGTTGGTGATTGACTTGGTA+AGG - chr3_2:80020073-80020092 None:intergenic 45.0%
TACCAAGTCAATCACCAACC+CGG + chr3_2:80020073-80020092 Msa0428930:intron 45.0%
ACCCAATCAAGTCTTACCAC+AGG + chr3_2:80020159-80020178 Msa0428930:intron 45.0%
CACCTGTGGTAAGACTTGAT+TGG - chr3_2:80020164-80020183 None:intergenic 45.0%
AGTCTTACCACAGGTGAGAT+TGG + chr3_2:80020168-80020187 Msa0428930:intron 45.0%
GAATTCCAACTAGAGGAACC+AGG - chr3_2:80020765-80020784 None:intergenic 45.0%
CTGTGCTGAATTCCAACTAG+AGG - chr3_2:80020772-80020791 None:intergenic 45.0%
CTCTAGTTGGAATTCAGCAC+AGG + chr3_2:80020770-80020789 Msa0428930:CDS 45.0%
GGGATTAACTATAAAGCCCC+AGG - chr3_2:80021431-80021450 None:intergenic 45.0%
TAATCCACCACTGGGTGTAA+GGG - chr3_2:80021452-80021471 None:intergenic 45.0%
GACACTCAGAGATCTCAGTA+AGG + chr3_2:80021639-80021658 Msa0428930:CDS 45.0%
GAACTTGAGCCACAAAGGTA+AGG - chr3_2:80022491-80022510 None:intergenic 45.0%
! TTGGCTTGACATCAACAGGA+GGG - chr3_2:80022576-80022595 None:intergenic 45.0%
!! ACAGTTGGCTTGACATCAAC+AGG - chr3_2:80022580-80022599 None:intergenic 45.0%
GTCAAGCCAACTGTTCTTGA+AGG + chr3_2:80022586-80022605 Msa0428930:CDS 45.0%
CAAGCCAACTGTTCTTGAAG+GGG + chr3_2:80022588-80022607 Msa0428930:CDS 45.0%
GAAGAACCTTCCAAGACTGT+TGG + chr3_2:80022730-80022749 Msa0428930:CDS 45.0%
CTACAACTACCTCATCACCA+GGG - chr3_2:80022786-80022805 None:intergenic 45.0%
ACTACAACTACCTCATCACC+AGG - chr3_2:80022787-80022806 None:intergenic 45.0%
! GGGTTCAGACATCTTTTCTC+TGG + chr3_2:80022849-80022868 Msa0428930:intron 45.0%
CACAGTTCACACAACTATGC+TGG + chr3_2:80023030-80023049 Msa0428930:intron 45.0%
TCATCGGCAAAGTTCAAGTG+GGG - chr3_2:80023078-80023097 None:intergenic 45.0%
AGGATTAGAAAGCTCGACCA+CGG - chr3_2:80023223-80023242 None:intergenic 45.0%
AGTGGTAATCCTATCAAGGG+TGG + chr3_2:80023456-80023475 Msa0428930:three_prime_UTR 45.0%
AACACGATCCCAAACACTCA+AGG - chr3_2:80023576-80023595 None:intergenic 45.0%
!! ACTTTGGTGATGCCATCCAA+AGG + chr3_2:80023674-80023693 Msa0428930:three_prime_UTR 45.0%
CAAATTAGGGGTCCATCCTT+TGG - chr3_2:80023693-80023712 None:intergenic 45.0%
!! TTGGTGGTGTGCTGAAGTTT+AGG + chr3_2:80023722-80023741 Msa0428930:three_prime_UTR 45.0%
!! GTATATTTATAAATAAAAAA+AGG - chr3_2:80019831-80019850 None:intergenic 5.0%
!!! AAAAAATTGTTTTAATATTA+AGG - chr3_2:80022422-80022441 None:intergenic 5.0%
! GAGTCTCGTTCTGAGTTCCT+TGG + chr3_2:80015649-80015668 Msa0428930:five_prime_UTR 50.0%
GGAACAACCTCTTCCATCTG+AGG + chr3_2:80015726-80015745 Msa0428930:CDS 50.0%
TCGTCGTCGTCATCAATAGC+TGG - chr3_2:80015766-80015785 None:intergenic 50.0%
CCTTCTGATGTGAGACATCG+GGG - chr3_2:80015963-80015982 None:intergenic 50.0%
AAGTACCCGCGAGTAATCGA+TGG + chr3_2:80016238-80016257 Msa0428930:intron 50.0%
AGTACCCGCGAGTAATCGAT+GGG + chr3_2:80016239-80016258 Msa0428930:intron 50.0%
! GATACCCATCGATTACTCGC+GGG - chr3_2:80016246-80016265 None:intergenic 50.0%
! CGATACCCATCGATTACTCG+CGG - chr3_2:80016247-80016266 None:intergenic 50.0%
CGCGAGTAATCGATGGGTAT+CGG + chr3_2:80016245-80016264 Msa0428930:intron 50.0%
GCGAGTAATCGATGGGTATC+GGG + chr3_2:80016246-80016265 Msa0428930:intron 50.0%
!! TAATCGATGGGTATCGGGTG+CGG + chr3_2:80016251-80016270 Msa0428930:intron 50.0%
!! TTCCTGCAATCTCTAGGGCT+TGG + chr3_2:80018257-80018276 Msa0428930:intron 50.0%
!! TCCTGCAATCTCTAGGGCTT+GGG + chr3_2:80018258-80018277 Msa0428930:intron 50.0%
GAAGAATAGCCTCCTTGGTC+AGG + chr3_2:80018310-80018329 Msa0428930:CDS 50.0%
! CAGGTACCGTGAAAAACGCA+AGG + chr3_2:80018329-80018348 Msa0428930:CDS 50.0%
AGCTTCCGAAAGGAAGTTCG+TGG + chr3_2:80018688-80018707 Msa0428930:intron 50.0%
GCTTCCGAAAGGAAGTTCGT+GGG + chr3_2:80018689-80018708 Msa0428930:intron 50.0%
CTTCCGAAAGGAAGTTCGTG+GGG + chr3_2:80018690-80018709 Msa0428930:intron 50.0%
! TTTTGGGCCAACAAGGTAGC+AGG - chr3_2:80018741-80018760 None:intergenic 50.0%
ATCCCGAGGGAATCAAACAC+GGG - chr3_2:80018860-80018879 None:intergenic 50.0%
CAAGGCGGGCACAATCAAAT+TGG - chr3_2:80019119-80019138 None:intergenic 50.0%
CAATTTGATTGTGCCCGCCT+TGG + chr3_2:80019117-80019136 Msa0428930:intron 50.0%
AGCAAATTGCGTGTCCAAGG+CGG - chr3_2:80019134-80019153 None:intergenic 50.0%
GCTCTGGTAAAACCAGGAAC+CGG + chr3_2:80019466-80019485 Msa0428930:intron 50.0%
AAAACCAGGAACCGGACACA+TGG + chr3_2:80019474-80019493 Msa0428930:intron 50.0%
CTCATCAAACTCGCGTAACC+CGG + chr3_2:80019555-80019574 Msa0428930:intron 50.0%
!! AACCGGGTTGGTGATTGACT+TGG - chr3_2:80020078-80020097 None:intergenic 50.0%
TGCTAGGATGCATCGGGAAA+AGG + chr3_2:80020713-80020732 Msa0428930:intron 50.0%
GCTAGGATGCATCGGGAAAA+GGG + chr3_2:80020714-80020733 Msa0428930:intron 50.0%
CTAGGATGCATCGGGAAAAG+GGG + chr3_2:80020715-80020734 Msa0428930:intron 50.0%
GAACCAGGGCTTTGCTTCAA+GGG - chr3_2:80020750-80020769 None:intergenic 50.0%
AAAGCCCTGGTTCCTCTAGT+TGG + chr3_2:80020757-80020776 Msa0428930:CDS 50.0%
AATACTCCTGCAATGCGTCG+CGG + chr3_2:80020958-80020977 Msa0428930:CDS 50.0%
GTTAATCCCCTTACACCCAG+TGG + chr3_2:80021442-80021461 Msa0428930:CDS 50.0%
AATCCACCACTGGGTGTAAG+GGG - chr3_2:80021451-80021470 None:intergenic 50.0%
CTAATCCACCACTGGGTGTA+AGG - chr3_2:80021453-80021472 None:intergenic 50.0%
CTCAGAGATCTCAGTAAGGG+TGG + chr3_2:80021643-80021662 Msa0428930:CDS 50.0%
TCCTGTTGAGCAAAGTCGTC+TGG + chr3_2:80021675-80021694 Msa0428930:CDS 50.0%
ACCAGACGACTTTGCTCAAC+AGG - chr3_2:80021679-80021698 None:intergenic 50.0%
!! GTTGGCTTGACATCAACAGG+AGG - chr3_2:80022577-80022596 None:intergenic 50.0%
ACCTTCCAAGACTGTTGGTG+CGG + chr3_2:80022735-80022754 Msa0428930:CDS 50.0%
! TGCATCAAACCCTGGTGATG+AGG + chr3_2:80022774-80022793 Msa0428930:CDS 50.0%
CAAGTGGGGCTACTTGAACT+CGG - chr3_2:80023064-80023083 None:intergenic 50.0%
ATATGACCTACAGGAACCCG+TGG + chr3_2:80023203-80023222 Msa0428930:intron 50.0%
GGATTAGAAAGCTCGACCAC+GGG - chr3_2:80023222-80023241 None:intergenic 50.0%
AGAGCTTCTCCACCCTTGAT+AGG - chr3_2:80023468-80023487 None:intergenic 50.0%
! TGGTGATGCCATCCAAAGGA+TGG + chr3_2:80023678-80023697 Msa0428930:three_prime_UTR 50.0%
TTAGGGGTCCATCCTTTGGA+TGG - chr3_2:80023689-80023708 None:intergenic 50.0%
GAAGTTTAGGCTTGTGCTGC+TGG + chr3_2:80023735-80023754 Msa0428930:three_prime_UTR 50.0%
! TTGTGCTGCTGGACTCTTAG+TGG + chr3_2:80023746-80023765 Msa0428930:three_prime_UTR 50.0%
! TGTGCTGCTGGACTCTTAGT+GGG + chr3_2:80023747-80023766 Msa0428930:three_prime_UTR 50.0%
!! GGACTCTTAGTGGGAGCATT+TGG + chr3_2:80023756-80023775 Msa0428930:three_prime_UTR 50.0%
GCAGGATCCTCAGATGGAAG+AGG - chr3_2:80015736-80015755 None:intergenic 55.0%
! TGATGACGACGACGACGATG+AGG + chr3_2:80015771-80015790 Msa0428930:CDS 55.0%
GCTGCAGCTGCAACACGTAT+TGG + chr3_2:80015898-80015917 Msa0428930:CDS 55.0%
CCCCGATGTCTCACATCAGA+AGG + chr3_2:80015960-80015979 Msa0428930:CDS 55.0%
!! AATCGATGGGTATCGGGTGC+GGG + chr3_2:80016252-80016271 Msa0428930:intron 55.0%
GATTGCTGTCGGGATCATGG+TGG + chr3_2:80016367-80016386 Msa0428930:intron 55.0%
!! TGCAATCTCTAGGGCTTGGG+CGG + chr3_2:80018261-80018280 Msa0428930:intron 55.0%
TTCACGGTACCTGACCAAGG+AGG - chr3_2:80018322-80018341 None:intergenic 55.0%
CGTCCCCACGAACTTCCTTT+CGG - chr3_2:80018696-80018715 None:intergenic 55.0%
CTGACCACCTGCTACCTTGT+TGG + chr3_2:80018731-80018750 Msa0428930:intron 55.0%
GCTCCCGTGTTTGATTCCCT+CGG + chr3_2:80018854-80018873 Msa0428930:intron 55.0%
CTCCCGTGTTTGATTCCCTC+GGG + chr3_2:80018855-80018874 Msa0428930:intron 55.0%
GGCGGGCACAATCAAATTGG+AGG - chr3_2:80019116-80019135 None:intergenic 55.0%
GCAAATTGCGTGTCCAAGGC+GGG - chr3_2:80019133-80019152 None:intergenic 55.0%
TCTGACCACACCAGTTACGC+CGG - chr3_2:80019577-80019596 None:intergenic 55.0%
TCAACAAGCAGCAGGCTCAG+TGG - chr3_2:80019707-80019726 None:intergenic 55.0%
! GAAGACTCGGTTGCATCACC+CGG - chr3_2:80019994-80020013 None:intergenic 55.0%
GGAACCAGGGCTTTGCTTCA+AGG - chr3_2:80020751-80020770 None:intergenic 55.0%
TGGAATTCAGCACAGGGTGC+TGG + chr3_2:80020777-80020796 Msa0428930:CDS 55.0%
CACAAAGTTCTTGGCCCAGC+TGG - chr3_2:80020985-80021004 None:intergenic 55.0%
CAATGCATGCGGCCTCATGT+GGG + chr3_2:80021005-80021024 Msa0428930:CDS 55.0%
CAACCTTGTTGGCCCACATG+AGG - chr3_2:80021020-80021039 None:intergenic 55.0%
CTCATGTGGGCCAACAAGGT+TGG + chr3_2:80021018-80021037 Msa0428930:CDS 55.0%
ACAGCTGAGACAATGGTCCC+TGG + chr3_2:80021394-80021413 Msa0428930:intron 55.0%
TGAGACAATGGTCCCTGGCA+TGG + chr3_2:80021399-80021418 Msa0428930:CDS 55.0%
GAGACAATGGTCCCTGGCAT+GGG + chr3_2:80021400-80021419 Msa0428930:CDS 55.0%
AATCCCCTTACACCCAGTGG+TGG + chr3_2:80021445-80021464 Msa0428930:CDS 55.0%
TCCGCACCAACAGTCTTGGA+AGG - chr3_2:80022739-80022758 None:intergenic 55.0%
TCCAAGACTGTTGGTGCGGA+AGG + chr3_2:80022739-80022758 Msa0428930:CDS 55.0%
ACCTTCCGCACCAACAGTCT+TGG - chr3_2:80022743-80022762 None:intergenic 55.0%
TGGGGCTACTTGAACTCGGA+TGG - chr3_2:80023060-80023079 None:intergenic 55.0%
GCAGCTGCAGTTGCAGTTGC+AGG - chr3_2:80015883-80015902 None:intergenic 60.0%
!! ATGGGTATCGGGTGCGGGTA+CGG + chr3_2:80016257-80016276 Msa0428930:intron 60.0%
AGTTCAGCTGTGGGCATGCC+TGG - chr3_2:80018140-80018159 None:intergenic 60.0%
GCCCAAGCCCTAGAGATTGC+AGG - chr3_2:80018262-80018281 None:intergenic 60.0%
AAGTTCGTGGGGACGCACAC+AGG + chr3_2:80018701-80018720 Msa0428930:intron 60.0%
AGTTCGTGGGGACGCACACA+GGG + chr3_2:80018702-80018721 Msa0428930:intron 60.0%
TGGGCCAACAAGGTAGCAGG+TGG - chr3_2:80018738-80018757 None:intergenic 60.0%
GATTGGACCGGCCATGTGTC+CGG - chr3_2:80019488-80019507 None:intergenic 60.0%
GTAACCCGGCGTAACTGGTG+TGG + chr3_2:80019569-80019588 Msa0428930:intron 60.0%
CTGACCACACCAGTTACGCC+GGG - chr3_2:80019576-80019595 None:intergenic 60.0%
GCACCCTTGAAGCAAAGCCC+TGG + chr3_2:80020744-80020763 Msa0428930:CDS 60.0%
!! GCACAGGGTGCTGGTCAAGA+TGG + chr3_2:80020786-80020805 Msa0428930:CDS 60.0%
GCAATGCATGCGGCCTCATG+TGG + chr3_2:80021004-80021023 Msa0428930:CDS 60.0%
GTGCAGCCAACTCCAGCTAC+TGG - chr3_2:80021128-80021147 None:intergenic 60.0%
!! TGGGTATCGGGTGCGGGTAC+GGG + chr3_2:80016258-80016277 Msa0428930:intron 65.0%
CCAGGAACCGGACACATGGC+CGG + chr3_2:80019478-80019497 Msa0428930:intron 65.0%
CTCGCGTAACCCGGCGTAAC+TGG + chr3_2:80019564-80019583 Msa0428930:intron 65.0%
CAATGCGTCGCGGACCAGCT+GGG + chr3_2:80020968-80020987 Msa0428930:CDS 65.0%
CGGCCTCATGTGGGCCAACA+AGG + chr3_2:80021014-80021033 Msa0428930:CDS 65.0%
GCTCGACCACGGGTTCCTGT+AGG - chr3_2:80023212-80023231 None:intergenic 65.0%
GGAGGAAGTGGTGCGCAGCC+AGG + chr3_2:80018119-80018138 Msa0428930:CDS 70.0%
CCGGCCATGTGTCCGGTTCC+TGG - chr3_2:80019481-80019500 None:intergenic 70.0%
GCTGGTCCGCGACGCATTGC+AGG - chr3_2:80020967-80020986 None:intergenic 70.0%
GCAATGCGTCGCGGACCAGC+TGG + chr3_2:80020967-80020986 Msa0428930:CDS 70.0%
TCCCTGGCATGGGAGCTGCC+TGG + chr3_2:80021410-80021429 Msa0428930:CDS 70.0%
CCCAGGCAGCTCCCATGCCA+GGG - chr3_2:80021414-80021433 None:intergenic 70.0%
CCCTGGCATGGGAGCTGCCT+GGG + chr3_2:80021411-80021430 Msa0428930:CDS 70.0%
CCTGGCATGGGAGCTGCCTG+GGG + chr3_2:80021412-80021431 Msa0428930:CDS 70.0%
CCCCAGGCAGCTCCCATGCC+AGG - chr3_2:80021415-80021434 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 80015563 80023892 80015563 ID=Msa0428930;Name=Msa0428930
chr3_2 mRNA 80015563 80023892 80015563 ID=Msa0428930-mRNA-1;Parent=Msa0428930;Name=Msa0428930-mRNA-1;_AED=0.29;_eAED=0.29;_QI=158|0.8|0.81|0.90|1|1|11|587|399
chr3_2 exon 80015563 80015981 80015563 ID=Msa0428930-mRNA-1:exon:21729;Parent=Msa0428930-mRNA-1
chr3_2 exon 80018095 80018181 80018095 ID=Msa0428930-mRNA-1:exon:21730;Parent=Msa0428930-mRNA-1
chr3_2 exon 80018273 80018406 80018273 ID=Msa0428930-mRNA-1:exon:21731;Parent=Msa0428930-mRNA-1
chr3_2 exon 80020719 80020829 80020719 ID=Msa0428930-mRNA-1:exon:21732;Parent=Msa0428930-mRNA-1
chr3_2 exon 80020924 80021078 80020924 ID=Msa0428930-mRNA-1:exon:21733;Parent=Msa0428930-mRNA-1
chr3_2 exon 80021398 80021477 80021398 ID=Msa0428930-mRNA-1:exon:21734;Parent=Msa0428930-mRNA-1
chr3_2 exon 80021637 80021696 80021637 ID=Msa0428930-mRNA-1:exon:21735;Parent=Msa0428930-mRNA-1
chr3_2 exon 80022571 80022636 80022571 ID=Msa0428930-mRNA-1:exon:21736;Parent=Msa0428930-mRNA-1
chr3_2 exon 80022721 80022795 80022721 ID=Msa0428930-mRNA-1:exon:21737;Parent=Msa0428930-mRNA-1
chr3_2 exon 80022897 80022977 80022897 ID=Msa0428930-mRNA-1:exon:21738;Parent=Msa0428930-mRNA-1
chr3_2 exon 80023216 80023892 80023216 ID=Msa0428930-mRNA-1:exon:21739;Parent=Msa0428930-mRNA-1
chr3_2 five_prime_UTR 80015563 80015720 80015563 ID=Msa0428930-mRNA-1:five_prime_utr;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80015721 80015981 80015721 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80018095 80018181 80018095 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80018273 80018406 80018273 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80020719 80020829 80020719 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80020924 80021078 80020924 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80021398 80021477 80021398 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80021637 80021696 80021637 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80022571 80022636 80022571 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80022721 80022795 80022721 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80022897 80022977 80022897 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 CDS 80023216 80023305 80023216 ID=Msa0428930-mRNA-1:cds;Parent=Msa0428930-mRNA-1
chr3_2 three_prime_UTR 80023306 80023892 80023306 ID=Msa0428930-mRNA-1:three_prime_utr;Parent=Msa0428930-mRNA-1
Gene Sequence

>Msa0428930

ATGGCGGAACAACCTCTTCCATCTGAGGATCCTGCAACAATTCCAGCTATTGATGACGACGACGACGATGAGGACTATACTGATGATGGTGATGATACTATGGATGAATTGGATGAAGAAACAAATGGTAATTCAGTGAACGTTGAAGGCACTTCAATTCCTGCAACTGCAACTGCAGCTGCAGCTGCAACACGTATTGGTGAACTCACTCTTTCTTTTGAAGGCGAGGTTTATGTCTTCCCCGATGTCTCACATCAGAAGGTGCAAGCTGTTTTGCTGTTTTTGGGAGGAAGTGGTGCGCAGCCAGGCATGCCCACAGCTGAACTGCCATTTGATCAGAGTAACAGGGGCTTGGGCGGTATTGCAAAGATTCCAAATCTTTCACGAAGAATAGCCTCCTTGGTCAGGTACCGTGAAAAACGCAAGGAAAGATGTTTTGACAAGAAAATTAGATACTCCGTGAGAAAAGAGGTGGCAGAAAGGATGCATCGGGAAAAGGGGCAGTTTGCACCCTTGAAGCAAAGCCCTGGTTCCTCTAGTTGGAATTCAGCACAGGGTGCTGGTCAAGATGGCAGTCCTAATCCTGAATCTCTACGTAGATGTCAACATTGTGGAGTCAATGAAAATAATACTCCTGCAATGCGTCGCGGACCAGCTGGGCCAAGAACTTTGTGCAATGCATGCGGCCTCATGTGGGCCAACAAGGTTGGTCATTTTGCTAACAAGTATGGTTTTGATGAAATGCTTGCTGAGACAATGGTCCCTGGCATGGGAGCTGCCTGGGGCTTTATAGTTAATCCCCTTACACCCAGTGGTGGATTAGATGTTGGGACACTCAGAGATCTCAGTAAGGGTGGAAGAAATCTTCCTGTTGAGCAAAGTCGTCTGGACCCTCCTGTTGATGTCAAGCCAACTGTTCTTGAAGGGGAATTCTCTGTCATTGAAAATGAACAAGGTATTTCTGAAGAACCTTCCAAGACTGTTGGTGCGGAAGGTTTGAATGATCATGCATCAAACCCTGGTGATGAGGAATTGTCTGAATCTGCAGAACACCTAACAAAAACACTGCCATTGGTAATTTGTCATTCTTCGGAAAATGATGATGAGCAGGAACCCGTGGTCGAGCTTTCTAATCCTTCAGATGCAGGAATGTCTAATCCTTCAGATACAGATATTGACATTCCTGGAAACTTTGATTAG
Protein sequence

>Msa0428930

MAEQPLPSEDPATIPAIDDDDDDEDYTDDGDDTMDELDEETNGNSVNVEGTSIPATATAAAAATRIGELTLSFEGEVYVFPDVSHQKVQAVLLFLGGSGAQPGMPTAELPFDQSNRGLGGIAKIPNLSRRIASLVRYREKRKERCFDKKIRYSVRKEVAERMHREKGQFAPLKQSPGSSSWNSAQGAGQDGSPNPESLRRCQHCGVNENNTPAMRRGPAGPRTLCNACGLMWANKVGHFANKYGFDEMLAETMVPGMGAAWGFIVNPLTPSGGLDVGTLRDLSKGGRNLPVEQSRLDPPVDVKPTVLEGEFSVIENEQGISEEPSKTVGAEGLNDHASNPGDEELSESAEHLTKTLPLVICHSSENDDEQEPVVELSNPSDAGMSNPSDTDIDIPGNFD*