Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0634550 | Msa0860110 | 0.806583 | 7.666044e-50 | -8.615850e-47 |
| Msa0766630 | Msa0860110 | 0.805620 | 1.222780e-49 | -8.615850e-47 |
| Msa0394530 | Msa0860110 | 0.820119 | 8.118085e-53 | -8.615850e-47 |
| Msa0435230 | Msa0860110 | 0.800195 | 1.615245e-48 | -8.615850e-47 |
| Msa0479340 | Msa0860110 | 0.807944 | 3.945971e-50 | -8.615850e-47 |
| Msa0502760 | Msa0860110 | 0.828908 | 6.922338e-55 | -8.615850e-47 |
| Msa0568310 | Msa0860110 | 0.816970 | 4.202490e-52 | -8.615850e-47 |
| Msa0860110 | Msa0901500 | 0.822945 | 1.804911e-53 | -8.615850e-47 |
| Msa0860110 | Msa0907260 | 0.807176 | 5.743383e-50 | -8.615850e-47 |
| Msa0860110 | Msa0956270 | 0.806770 | 7.000820e-50 | -8.615850e-47 |
| Msa0860110 | Msa0967580 | 0.816407 | 5.617774e-52 | -8.615850e-47 |
| Msa0860110 | Msa1136090 | 0.805819 | 1.110136e-49 | -8.615850e-47 |
| Msa0860110 | Msa1196960 | 0.804379 | 2.222638e-49 | -8.615850e-47 |
| Msa0860110 | Msa1240030 | 0.804696 | 1.908650e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGAAGTGAGACGGTTT+TGG | 0.294453 | 5_4:-58628833 | None:intergenic |
| GATGAGATGAGGTGAGGTTC+TGG | 0.300919 | 5_4:-58628886 | None:intergenic |
| CATTTCTTCCTCTTGCTCCT+TGG | 0.325994 | 5_4:-58634384 | None:intergenic |
| AATTCCTTTCTCTGCAACTT+TGG | 0.392967 | 5_4:-58634460 | None:intergenic |
| TTGCACCTTGTGTTGGAAAC+TGG | 0.401274 | 5_4:+58634481 | Msa0860110:three_prime_UTR |
| TGCATTATGTGCAGGTAGCT+TGG | 0.407949 | 5_4:+58634557 | Msa0860110:three_prime_UTR |
| ATGAGATGAGGTGAGGTTCT+GGG | 0.431044 | 5_4:-58628885 | None:intergenic |
| AAGAAATGAACTTTAAGTAG+TGG | 0.444584 | 5_4:+58634399 | Msa0860110:exon |
| TGTCTGCTAGGAATGTTGTT+GGG | 0.450777 | 5_4:+58634518 | Msa0860110:three_prime_UTR |
| TGAAAGATTGCAGAGAAAGA+AGG | 0.479276 | 5_4:+58634435 | Msa0860110:three_prime_UTR |
| AGAGGATTGACAGAGGCAAT+AGG | 0.481013 | 5_4:-58628938 | None:intergenic |
| AGAAATGAACTTTAAGTAGT+GGG | 0.490747 | 5_4:+58634400 | Msa0860110:exon |
| GGTTCCAAAGTTGCAGAGAA+AGG | 0.495040 | 5_4:+58634456 | Msa0860110:three_prime_UTR |
| AAAGGAATTGCACCTTGTGT+TGG | 0.499508 | 5_4:+58634474 | Msa0860110:three_prime_UTR |
| GTGAGGGTTGACATCTGCGT+CGG | 0.510667 | 5_4:-58628976 | None:intergenic |
| AAATCTCCTCTCACTCATCA+TGG | 0.511174 | 5_4:+58628859 | Msa0860110:exon |
| GAGGGCGATGGAGCGATGAA+AGG | 0.512177 | 5_4:-58629008 | None:intergenic |
| CTGTCTGCTAGGAATGTTGT+TGG | 0.512759 | 5_4:+58634517 | Msa0860110:three_prime_UTR |
| GTCTGCTAGGAATGTTGTTG+GGG | 0.524420 | 5_4:+58634519 | Msa0860110:three_prime_UTR |
| GAACTTTAAGTAGTGGGAAG+AGG | 0.535820 | 5_4:+58634406 | Msa0860110:exon |
| TGAGGGTTGACATCTGCGTC+GGG | 0.537154 | 5_4:-58628975 | None:intergenic |
| TAGCAACAATACTGTCTGCT+AGG | 0.542055 | 5_4:+58634506 | Msa0860110:three_prime_UTR |
| AGGGCGATGGAGCGATGAAA+GGG | 0.544961 | 5_4:-58629007 | None:intergenic |
| AAAATACCTTTGTGAGGGAG+AGG | 0.545723 | 5_4:-58629027 | None:intergenic |
| AGAAAGATTGCATTATGTGC+AGG | 0.545965 | 5_4:+58634549 | Msa0860110:three_prime_UTR |
| CTTTGTGAGGGAGAGGGCGA+TGG | 0.557738 | 5_4:-58629020 | None:intergenic |
| ATGAAAGGGTTTCCTTCGTG+AGG | 0.566602 | 5_4:-58628993 | None:intergenic |
| TGAAAGGGTTTCCTTCGTGA+GGG | 0.568836 | 5_4:-58628992 | None:intergenic |
| TAACAGGACCAAGGAGCAAG+AGG | 0.582357 | 5_4:+58634376 | Msa0860110:intron |
| GGGTTTCCATGATGAGTGAG+AGG | 0.590591 | 5_4:-58628865 | None:intergenic |
| CTACACCAGTTTCCAACACA+AGG | 0.592815 | 5_4:-58634486 | None:intergenic |
| CGGGTTTCTGAAAGAGTGAG+AGG | 0.597597 | 5_4:-58628956 | None:intergenic |
| AAATACCTTTGTGAGGGAGA+GGG | 0.598580 | 5_4:-58629026 | None:intergenic |
| GAGATGAGGTCGATGAGATG+AGG | 0.622973 | 5_4:-58628897 | None:intergenic |
| TTTCACGAAGAGAAGTGAGA+CGG | 0.625027 | 5_4:-58628839 | None:intergenic |
| TTTACTTTATAACAGGACCA+AGG | 0.637117 | 5_4:+58634367 | Msa0860110:intron |
| AGAGAGAGTGAGATGAGATG+AGG | 0.651414 | 5_4:-58628911 | None:intergenic |
| CATCGCCCTCTCCCTCACAA+AGG | 0.667019 | 5_4:+58629021 | Msa0860110:CDS |
| AAGAGTGAGAGGATTGACAG+AGG | 0.672798 | 5_4:-58628945 | None:intergenic |
| GCAGATGTCAACCCTCACGA+AGG | 0.681692 | 5_4:+58628981 | Msa0860110:CDS |
| GAGGTCGATGAGATGAGGTG+AGG | 0.683473 | 5_4:-58628892 | None:intergenic |
| AGCTTGGAAAGAGAAACAAG+AGG | 0.730779 | 5_4:+58634573 | Msa0860110:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTATTTGAATTGA+AGG | + | chr5_4:58629733-58629752 | Msa0860110:intron | 10.0% |
| !!! | ATTTTGATTAAGAAAATAAA+AGG | + | chr5_4:58629962-58629981 | Msa0860110:intron | 10.0% |
| !!! | TTTGATTTTTTTATTGTAAT+AGG | + | chr5_4:58634003-58634022 | Msa0860110:intron | 10.0% |
| !!! | TTAATGAGATTGATAATTAT+AGG | + | chr5_4:58629105-58629124 | Msa0860110:intron | 15.0% |
| !!! | TAATGAGATTGATAATTATA+GGG | + | chr5_4:58629106-58629125 | Msa0860110:intron | 15.0% |
| !!! | TGATATCTTATTTTTTTCTT+GGG | + | chr5_4:58629495-58629514 | Msa0860110:intron | 15.0% |
| !! | AATAAAAGGAAAAATTACAA+TGG | + | chr5_4:58629976-58629995 | Msa0860110:intron | 15.0% |
| !! | ATAAAAGGAAAAATTACAAT+GGG | + | chr5_4:58629977-58629996 | Msa0860110:intron | 15.0% |
| !!! | TTTTAAAATGGATTTTAACA+AGG | + | chr5_4:58632544-58632563 | Msa0860110:intron | 15.0% |
| !!! | AAGAATTGATTAGTATTTTT+AGG | + | chr5_4:58632916-58632935 | Msa0860110:intron | 15.0% |
| !!! | TTAATTTTATGATTATGATC+AGG | + | chr5_4:58633432-58633451 | Msa0860110:intron | 15.0% |
| !! | CTTAAAAAAATCCATAAAAA+TGG | - | chr5_4:58633506-58633525 | None:intergenic | 15.0% |
| !!! | CATTTTTATGGATTTTTTTA+AGG | + | chr5_4:58633504-58633523 | Msa0860110:intron | 15.0% |
| !!! | AGATTATTATTTGATAGTTT+TGG | + | chr5_4:58633847-58633866 | Msa0860110:intron | 15.0% |
| !!! | GTTGATTTCAATGAAAAATT+GGG | + | chr5_4:58629138-58629157 | Msa0860110:intron | 20.0% |
| !! | ACAAATCAATATTCAAAGAT+GGG | - | chr5_4:58629243-58629262 | None:intergenic | 20.0% |
| !! | AACAAATCAATATTCAAAGA+TGG | - | chr5_4:58629244-58629263 | None:intergenic | 20.0% |
| !! | AGAAAAAAATAAGATATCAC+CGG | - | chr5_4:58629494-58629513 | None:intergenic | 20.0% |
| !!! | GTGATATCTTATTTTTTTCT+TGG | + | chr5_4:58629494-58629513 | Msa0860110:intron | 20.0% |
| !!! | CTATTTTGAAAGTAGTTATT+AGG | + | chr5_4:58629659-58629678 | Msa0860110:intron | 20.0% |
| !!! | AAAAAGGTTTTTGTTTTTGT+TGG | + | chr5_4:58629815-58629834 | Msa0860110:intron | 20.0% |
| !! | TTTCTTTCTTAATAAACCTT+GGG | - | chr5_4:58630011-58630030 | None:intergenic | 20.0% |
| !! | ATTTCTTTCTTAATAAACCT+TGG | - | chr5_4:58630012-58630031 | None:intergenic | 20.0% |
| !! | TTAAGGTGTAAGAAAAATAA+AGG | + | chr5_4:58630325-58630344 | Msa0860110:intron | 20.0% |
| !! | CAAAAAGTCATATCAAAATA+TGG | + | chr5_4:58630784-58630803 | Msa0860110:intron | 20.0% |
| !!! | AACATTTTACATGCTAAAAT+TGG | - | chr5_4:58630878-58630897 | None:intergenic | 20.0% |
| !!! | GAATTTTTAGGAATTTTTCA+TGG | + | chr5_4:58630934-58630953 | Msa0860110:intron | 20.0% |
| !!! | TATGTGATTTAATTTCGAAT+CGG | - | chr5_4:58631306-58631325 | None:intergenic | 20.0% |
| !! | TTAGACACAATAAAATTCAA+TGG | - | chr5_4:58631844-58631863 | None:intergenic | 20.0% |
| !!! | TTGTGAATTGATGAATTTTT+GGG | + | chr5_4:58631903-58631922 | Msa0860110:intron | 20.0% |
| !!! | AAATTGATGATATTGGAAAA+CGG | + | chr5_4:58631939-58631958 | Msa0860110:intron | 20.0% |
| !! | AAACAATAAAGGACTTTAAA+AGG | + | chr5_4:58632260-58632279 | Msa0860110:intron | 20.0% |
| !! | AATTGGTAAAAAACGTAATT+TGG | + | chr5_4:58632361-58632380 | Msa0860110:intron | 20.0% |
| !! | ACGATTAAAATTTGACAAAA+TGG | + | chr5_4:58632401-58632420 | Msa0860110:intron | 20.0% |
| !!! | CTTTTAATTTTGTTTGCATA+AGG | - | chr5_4:58632583-58632602 | None:intergenic | 20.0% |
| !!! | ACAAATTTTAGAAATTGAAC+AGG | + | chr5_4:58632611-58632630 | Msa0860110:intron | 20.0% |
| !!! | CAAATTTTAGAAATTGAACA+GGG | + | chr5_4:58632612-58632631 | Msa0860110:intron | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | + | chr5_4:58632929-58632948 | Msa0860110:intron | 20.0% |
| !! | TTAATAAGCAAGCATATATA+TGG | - | chr5_4:58633015-58633034 | None:intergenic | 20.0% |
| !! | ATCTGTATAAATCAAATCAA+AGG | + | chr5_4:58633477-58633496 | Msa0860110:intron | 20.0% |
| !! | CTATCAAATAATAATCTTTG+TGG | - | chr5_4:58633844-58633863 | None:intergenic | 20.0% |
| !!! | TATTCAATTTGCACATTTTA+TGG | + | chr5_4:58633901-58633920 | Msa0860110:intron | 20.0% |
| !!! | TATTGTAATAGGTTGTTTTT+AGG | + | chr5_4:58634014-58634033 | Msa0860110:intron | 20.0% |
| !!! | ATTGTAATAGGTTGTTTTTA+GGG | + | chr5_4:58634015-58634034 | Msa0860110:intron | 20.0% |
| !!! | AAATTGAAGAGCTTTTAAAA+TGG | - | chr5_4:58634098-58634117 | None:intergenic | 20.0% |
| !!! | TCAACGAATTGTTTAAAATA+TGG | - | chr5_4:58634166-58634185 | None:intergenic | 20.0% |
| !! | ATTGTTAAAAGTAGATTTGT+TGG | + | chr5_4:58634192-58634211 | Msa0860110:intron | 20.0% |
| !!! | TTGTTAAAAGTAGATTTGTT+GGG | + | chr5_4:58634193-58634212 | Msa0860110:intron | 20.0% |
| !!! | TATCTGTTATTTTGATTTGT+TGG | + | chr5_4:58634228-58634247 | Msa0860110:intron | 20.0% |
| !!! | ATCTGTTATTTTGATTTGTT+GGG | + | chr5_4:58634229-58634248 | Msa0860110:intron | 20.0% |
| !! | ATGAGAATTTACTTTATAAC+AGG | + | chr5_4:58634360-58634379 | Msa0860110:intron | 20.0% |
| ! | GAATAAAAATACCTTTGTGA+GGG | - | chr5_4:58629035-58629054 | None:intergenic | 25.0% |
| ! | AGAATAAAAATACCTTTGTG+AGG | - | chr5_4:58629036-58629055 | None:intergenic | 25.0% |
| ! | TGATAGAACAAATTGATCTA+TGG | - | chr5_4:58629063-58629082 | None:intergenic | 25.0% |
| ! | CATTAAAACAATTCAAAGAC+AGG | - | chr5_4:58629091-58629110 | None:intergenic | 25.0% |
| !! | GGTTGATTTCAATGAAAAAT+TGG | + | chr5_4:58629137-58629156 | Msa0860110:intron | 25.0% |
| ! | GATTAAGAACAGTCAAAATT+TGG | + | chr5_4:58629160-58629179 | Msa0860110:intron | 25.0% |
| ! | ATTAGACTAGAATAAGTAGT+TGG | - | chr5_4:58629391-58629410 | None:intergenic | 25.0% |
| ! | AAAACCAAGATAAAACAGTA+TGG | - | chr5_4:58629434-58629453 | None:intergenic | 25.0% |
| !!! | TACTGTTTTATCTTGGTTTT+CGG | + | chr5_4:58629434-58629453 | Msa0860110:intron | 25.0% |
| !!! | ATCTTATTTTTTTCTTGGGA+AGG | + | chr5_4:58629499-58629518 | Msa0860110:intron | 25.0% |
| !!! | TCTTATTTTTTTCTTGGGAA+GGG | + | chr5_4:58629500-58629519 | Msa0860110:intron | 25.0% |
| !!! | GTTGATTTGAAGTTGAAAAT+TGG | + | chr5_4:58629837-58629856 | Msa0860110:intron | 25.0% |
| ! | AATTAGTCATTTGCAAAATG+TGG | + | chr5_4:58629915-58629934 | Msa0860110:intron | 25.0% |
| !!! | TGAAGTTTGTTCAAGTTTTT+TGG | + | chr5_4:58630037-58630056 | Msa0860110:intron | 25.0% |
| !! | TTTTTCTAAGTATGAATCCT+AGG | + | chr5_4:58630068-58630087 | Msa0860110:intron | 25.0% |
| ! | AAGATTAGAATGTAAAGCTT+AGG | - | chr5_4:58630295-58630314 | None:intergenic | 25.0% |
| ! | TAATCTTTGCATGAAAGTTA+AGG | + | chr5_4:58630308-58630327 | Msa0860110:intron | 25.0% |
| ! | TTCCTCATAATTCTTGTATT+GGG | - | chr5_4:58630591-58630610 | None:intergenic | 25.0% |
| ! | TTTCCTCATAATTCTTGTAT+TGG | - | chr5_4:58630592-58630611 | None:intergenic | 25.0% |
| ! | GAAACATATTGAAATCACAT+AGG | + | chr5_4:58630912-58630931 | Msa0860110:intron | 25.0% |
| !! | GAAATCACATAGGAATTTTT+AGG | + | chr5_4:58630922-58630941 | Msa0860110:intron | 25.0% |
| ! | CTAGTTTCAGAATTAAAAAG+AGG | - | chr5_4:58631348-58631367 | None:intergenic | 25.0% |
| !! | GTTGTGAATTGATGAATTTT+TGG | + | chr5_4:58631902-58631921 | Msa0860110:intron | 25.0% |
| ! | AGTCTTAAAAAATTGCAGAT+TGG | - | chr5_4:58632194-58632213 | None:intergenic | 25.0% |
| !!! | TCTGCAATTTTTTAAGACTT+TGG | + | chr5_4:58632195-58632214 | Msa0860110:intron | 25.0% |
| !!! | CTGCAATTTTTTAAGACTTT+GGG | + | chr5_4:58632196-58632215 | Msa0860110:intron | 25.0% |
| ! | ATTCTTGGTCAATTACATTT+CGG | - | chr5_4:58632287-58632306 | None:intergenic | 25.0% |
| ! | TGTAATTGACCAAGAATAAA+AGG | + | chr5_4:58632290-58632309 | Msa0860110:intron | 25.0% |
| !!! | TGTTTTAGTCCTTTTATTCT+TGG | - | chr5_4:58632302-58632321 | None:intergenic | 25.0% |
| ! | TAAAACACAAAATGACACAA+AGG | + | chr5_4:58632315-58632334 | Msa0860110:intron | 25.0% |
| !!! | TACTTTAAAGTACCTCATTT+AGG | - | chr5_4:58632445-58632464 | None:intergenic | 25.0% |
| !!! | CTCAGATGCAAATTTTAAAA+TGG | + | chr5_4:58632532-58632551 | Msa0860110:intron | 25.0% |
| !!! | TTCAACTGCAAATTTTGAAA+TGG | + | chr5_4:58632691-58632710 | Msa0860110:intron | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | + | chr5_4:58632928-58632947 | Msa0860110:intron | 25.0% |
| !! | TATGTGTTATACCCTAATTT+TGG | - | chr5_4:58632943-58632962 | None:intergenic | 25.0% |
| ! | GAAAGTTATGATCTTTGATT+TGG | + | chr5_4:58633070-58633089 | Msa0860110:intron | 25.0% |
| ! | TGAATTCAATCTTGAGTAAT+TGG | + | chr5_4:58633138-58633157 | Msa0860110:intron | 25.0% |
| !!! | ACGCTTATTTGATTTTCTTT+TGG | + | chr5_4:58633169-58633188 | Msa0860110:intron | 25.0% |
| !! | TTTTACTCTTTAGTTGAACA+TGG | + | chr5_4:58633215-58633234 | Msa0860110:intron | 25.0% |
| !!! | TTAACTTGTAAACTTCATTG+TGG | + | chr5_4:58633256-58633275 | Msa0860110:intron | 25.0% |
| !! | GTTAGTAAGGATAAATTTTC+CGG | + | chr5_4:58633632-58633651 | Msa0860110:intron | 25.0% |
| ! | AAATAATAATCTTTGTGGCA+GGG | - | chr5_4:58633839-58633858 | None:intergenic | 25.0% |
| !!! | TGATAGTTTTGGTAATTTAG+AGG | + | chr5_4:58633858-58633877 | Msa0860110:intron | 25.0% |
| !!! | GATAGTTTTGGTAATTTAGA+GGG | + | chr5_4:58633859-58633878 | Msa0860110:intron | 25.0% |
| ! | TAATTTAGAGGGTTAAAGTT+TGG | + | chr5_4:58633870-58633889 | Msa0860110:intron | 25.0% |
| !! | TTGCACATTTTATGGTTTTT+TGG | + | chr5_4:58633909-58633928 | Msa0860110:intron | 25.0% |
| !! | TGCACATTTTATGGTTTTTT+GGG | + | chr5_4:58633910-58633929 | Msa0860110:intron | 25.0% |
| !!! | ATTTTATGGTTTTTTGGGTT+CGG | + | chr5_4:58633915-58633934 | Msa0860110:intron | 25.0% |
| ! | AGAAAATCAAGAATGATGAA+CGG | - | chr5_4:58633984-58634003 | None:intergenic | 25.0% |
| ! | TGGTTCAAATTATAAAAGCT+TGG | + | chr5_4:58634049-58634068 | Msa0860110:intron | 25.0% |
| ! | TTGGGTTTATAATGAAAGTT+GGG | + | chr5_4:58634247-58634266 | Msa0860110:intron | 25.0% |
| ! | AAGAAATGAACTTTAAGTAG+TGG | + | chr5_4:58634399-58634418 | Msa0860110:exon | 25.0% |
| ! | AGAAATGAACTTTAAGTAGT+GGG | + | chr5_4:58634400-58634419 | Msa0860110:exon | 25.0% |
| GATAATTATAGGGTTTGATG+TGG | + | chr5_4:58629116-58629135 | Msa0860110:intron | 30.0% | |
| !!! | GGTTTTAGGGTTTTTGATTT+GGG | + | chr5_4:58629285-58629304 | Msa0860110:intron | 30.0% |
| ! | AGTTCCATACTGTTTTATCT+TGG | + | chr5_4:58629427-58629446 | Msa0860110:intron | 30.0% |
| !! | ACTGTTTTATCTTGGTTTTC+GGG | + | chr5_4:58629435-58629454 | Msa0860110:intron | 30.0% |
| ! | TACGTTTGAACCTTTTAAAC+CGG | + | chr5_4:58629472-58629491 | Msa0860110:intron | 30.0% |
| !! | TAAGATATCACCGGTTTAAA+AGG | - | chr5_4:58629485-58629504 | None:intergenic | 30.0% |
| AATTAAAGACGGTTCCTATA+GGG | - | chr5_4:58629612-58629631 | None:intergenic | 30.0% | |
| AAATTAAAGACGGTTCCTAT+AGG | - | chr5_4:58629613-58629632 | None:intergenic | 30.0% | |
| AAAGTAGTTATTAGGCCTAA+AGG | + | chr5_4:58629667-58629686 | Msa0860110:intron | 30.0% | |
| TCTTCACTTAGAATACCTTT+AGG | - | chr5_4:58629685-58629704 | None:intergenic | 30.0% | |
| AGGTATTCTAAGTGAAGAAT+TGG | + | chr5_4:58629687-58629706 | Msa0860110:intron | 30.0% | |
| TATTCTAAGTGAAGAATTGG+AGG | + | chr5_4:58629690-58629709 | Msa0860110:intron | 30.0% | |
| ATTCTAAGTGAAGAATTGGA+GGG | + | chr5_4:58629691-58629710 | Msa0860110:intron | 30.0% | |
| !! | ACCTTTTTGAAAGAGAACTA+CGG | - | chr5_4:58629803-58629822 | None:intergenic | 30.0% |
| GGAATTTGAAGAATAGAAAG+AGG | + | chr5_4:58629858-58629877 | Msa0860110:intron | 30.0% | |
| GCATGTTTAGATGTATGTTT+AGG | - | chr5_4:58630114-58630133 | None:intergenic | 30.0% | |
| CAATGATGTAATAAGGACAA+TGG | - | chr5_4:58630209-58630228 | None:intergenic | 30.0% | |
| CATTGTCCTTATTACATCAT+TGG | + | chr5_4:58630207-58630226 | Msa0860110:intron | 30.0% | |
| ! | TGGTCTTGCAAGAAATTTAA+AGG | + | chr5_4:58630245-58630264 | Msa0860110:intron | 30.0% |
| TAAAGGATGAAGATATGAGA+TGG | + | chr5_4:58630342-58630361 | Msa0860110:intron | 30.0% | |
| TGATGTATGCAACAAAATAG+AGG | + | chr5_4:58630380-58630399 | Msa0860110:intron | 30.0% | |
| AGAGGAAATTGTTAGTAGTA+TGG | + | chr5_4:58630398-58630417 | Msa0860110:intron | 30.0% | |
| GAGGAAATTGTTAGTAGTAT+GGG | + | chr5_4:58630399-58630418 | Msa0860110:intron | 30.0% | |
| AGGAAATTGTTAGTAGTATG+GGG | + | chr5_4:58630400-58630419 | Msa0860110:intron | 30.0% | |
| TTAGTAGTATGGGGAATAAA+GGG | + | chr5_4:58630409-58630428 | Msa0860110:intron | 30.0% | |
| TGTAAAGTAGTCATGATATG+AGG | - | chr5_4:58630550-58630569 | None:intergenic | 30.0% | |
| CATATCATGACTACTTTACA+AGG | + | chr5_4:58630550-58630569 | Msa0860110:intron | 30.0% | |
| TTCCCAATACAAGAATTATG+AGG | + | chr5_4:58630586-58630605 | Msa0860110:intron | 30.0% | |
| CTATCATTACTTGCAAAACA+AGG | + | chr5_4:58630665-58630684 | Msa0860110:intron | 30.0% | |
| ! | GATATGACTTTTTGTCCAAT+TGG | - | chr5_4:58630778-58630797 | None:intergenic | 30.0% |
| ! | ATGGAAAATTTTAGACAAGC+AGG | + | chr5_4:58630953-58630972 | Msa0860110:intron | 30.0% |
| ! | TGGAAAATTTTAGACAAGCA+GGG | + | chr5_4:58630954-58630973 | Msa0860110:intron | 30.0% |
| AAAAAAATAGCAAGAAACGC+AGG | + | chr5_4:58630989-58631008 | Msa0860110:intron | 30.0% | |
| CTTATATACACTCTCAAAAC+CGG | - | chr5_4:58631122-58631141 | None:intergenic | 30.0% | |
| GTGTATATAAGCAAGAAAAC+CGG | + | chr5_4:58631131-58631150 | Msa0860110:intron | 30.0% | |
| ATCTTAGTGAGAGAAACATA+GGG | - | chr5_4:58631173-58631192 | None:intergenic | 30.0% | |
| ! | TCTGAAACTAGATTTCTAAG+AGG | + | chr5_4:58631357-58631376 | Msa0860110:intron | 30.0% |
| TAGATCTAGAAAGGAACTTA+CGG | + | chr5_4:58631395-58631414 | Msa0860110:intron | 30.0% | |
| ATTTACCTCTTTCTGATTCA+AGG | + | chr5_4:58631532-58631551 | Msa0860110:intron | 30.0% | |
| !! | GAATTGATGAATTTTTGGGA+TGG | + | chr5_4:58631907-58631926 | Msa0860110:intron | 30.0% |
| CCAATATCATCAATTTCGAT+TGG | - | chr5_4:58631935-58631954 | None:intergenic | 30.0% | |
| ! | CCAATCGAAATTGATGATAT+TGG | + | chr5_4:58631932-58631951 | Msa0860110:intron | 30.0% |
| ATGATATTGGAAAACGGTTA+GGG | + | chr5_4:58631945-58631964 | Msa0860110:intron | 30.0% | |
| ! | GATGAAGTTCATGAGAATTT+TGG | + | chr5_4:58631988-58632007 | Msa0860110:intron | 30.0% |
| GAGAAAATGTAATGTGTTTG+TGG | + | chr5_4:58632036-58632055 | Msa0860110:intron | 30.0% | |
| CTGCAAAATACAACAAATGA+AGG | + | chr5_4:58632225-58632244 | Msa0860110:intron | 30.0% | |
| !!! | CCTTTATTGTTTTTGCAGTT+TGG | - | chr5_4:58632252-58632271 | None:intergenic | 30.0% |
| CCAAACTGCAAAAACAATAA+AGG | + | chr5_4:58632249-58632268 | Msa0860110:intron | 30.0% | |
| !!! | GGTATTTTAGTCATTTCCTA+TGG | - | chr5_4:58632801-58632820 | None:intergenic | 30.0% |
| TTTGCAAAATTCACATGCAA+GGG | - | chr5_4:58632822-58632841 | None:intergenic | 30.0% | |
| AATGACTTGAAATGCAAGAA+AGG | + | chr5_4:58632893-58632912 | Msa0860110:intron | 30.0% | |
| CATACTATACATTGTCTTGT+AGG | + | chr5_4:58632959-58632978 | Msa0860110:intron | 30.0% | |
| AGAAAATCAAATAAGCGTTC+AGG | - | chr5_4:58633167-58633186 | None:intergenic | 30.0% | |
| TCTTTAGTTGAACATGGTTA+TGG | + | chr5_4:58633221-58633240 | Msa0860110:intron | 30.0% | |
| !!! | ATCAAAGGAAGCCATTTTTA+TGG | + | chr5_4:58633492-58633511 | Msa0860110:intron | 30.0% |
| !! | TCATCTCTCTAAAGTTAGTA+AGG | + | chr5_4:58633619-58633638 | Msa0860110:intron | 30.0% |
| ! | AGGATAAATTTTCCGGATAT+TGG | + | chr5_4:58633639-58633658 | Msa0860110:intron | 30.0% |
| !! | ATATTGGTTCTGAGTATGTA+AGG | + | chr5_4:58633655-58633674 | Msa0860110:intron | 30.0% |
| AATAATAATCTTTGTGGCAG+GGG | - | chr5_4:58633838-58633857 | None:intergenic | 30.0% | |
| CAAATAATAATCTTTGTGGC+AGG | - | chr5_4:58633840-58633859 | None:intergenic | 30.0% | |
| !!! | TCGTAGTTTGCTGTATTTTT+TGG | + | chr5_4:58633945-58633964 | Msa0860110:intron | 30.0% |
| TTAAAATGGACCACACAATA+AGG | - | chr5_4:58634084-58634103 | None:intergenic | 30.0% | |
| ! | CTCTTCAATTTTATTCCTAC+AGG | + | chr5_4:58634107-58634126 | Msa0860110:intron | 30.0% |
| GTTGGGTTTATAATGAAAGT+TGG | + | chr5_4:58634246-58634265 | Msa0860110:intron | 30.0% | |
| CCATTCACAATGTATGAAAA+AGG | - | chr5_4:58634281-58634300 | None:intergenic | 30.0% | |
| !! | CCTTTTTCATACATTGTGAA+TGG | + | chr5_4:58634278-58634297 | Msa0860110:intron | 30.0% |
| TTTACTTTATAACAGGACCA+AGG | + | chr5_4:58634367-58634386 | Msa0860110:intron | 30.0% | |
| CACTCGAAACTCATCTATAA+AGG | + | chr5_4:58629201-58629220 | Msa0860110:intron | 35.0% | |
| TTGCTGCTAGATTGTGATTT+CGG | + | chr5_4:58629263-58629282 | Msa0860110:intron | 35.0% | |
| !!! | AGATTGTGATTTCGGGTTTT+AGG | + | chr5_4:58629271-58629290 | Msa0860110:intron | 35.0% |
| !!! | GATTGTGATTTCGGGTTTTA+GGG | + | chr5_4:58629272-58629291 | Msa0860110:intron | 35.0% |
| !!! | GGGTTTTAGGGTTTTTGATT+TGG | + | chr5_4:58629284-58629303 | Msa0860110:intron | 35.0% |
| !! | CTCCTTCAATTTGGGTTTTA+GGG | + | chr5_4:58629324-58629343 | Msa0860110:intron | 35.0% |
| AACCCTAAAACCCAAATTGA+AGG | - | chr5_4:58629329-58629348 | None:intergenic | 35.0% | |
| !!! | GGTTTTAGGGTTTCTGATTT+GGG | + | chr5_4:58629337-58629356 | Msa0860110:intron | 35.0% |
| !!! | GTTTTAGGGTTTCTGATTTG+GGG | + | chr5_4:58629338-58629357 | Msa0860110:intron | 35.0% |
| ! | TAGGGTACTATAGTCGTTAT+GGG | - | chr5_4:58629594-58629613 | None:intergenic | 35.0% |
| ! | ATAGGGTACTATAGTCGTTA+TGG | - | chr5_4:58629595-58629614 | None:intergenic | 35.0% |
| TAACGACTATAGTACCCTAT+AGG | + | chr5_4:58629595-58629614 | Msa0860110:intron | 35.0% | |
| !!! | GAGGGAGAAGAATGTTTTTT+GGG | + | chr5_4:58629709-58629728 | Msa0860110:intron | 35.0% |
| !! | TTTTTGAAAGAGAACTACGG+TGG | - | chr5_4:58629800-58629819 | None:intergenic | 35.0% |
| ACCGTAGTTCTCTTTCAAAA+AGG | + | chr5_4:58629799-58629818 | Msa0860110:intron | 35.0% | |
| GGCATGAGATTGTAAAAAGT+GGG | + | chr5_4:58629888-58629907 | Msa0860110:intron | 35.0% | |
| GCATGAGATTGTAAAAAGTG+GGG | + | chr5_4:58629889-58629908 | Msa0860110:intron | 35.0% | |
| GTATGTTTAGATGAATGCCT+AGG | - | chr5_4:58630088-58630107 | None:intergenic | 35.0% | |
| TCTAGGCCAATGATGTAATA+AGG | - | chr5_4:58630216-58630235 | None:intergenic | 35.0% | |
| ! | ATTGGCCTAGATACATTCTA+TGG | + | chr5_4:58630225-58630244 | Msa0860110:intron | 35.0% |
| CAAGACCATAGAATGTATCT+AGG | - | chr5_4:58630233-58630252 | None:intergenic | 35.0% | |
| GTTAGTAGTATGGGGAATAA+AGG | + | chr5_4:58630408-58630427 | Msa0860110:intron | 35.0% | |
| ! | TGTCATTGTGGTGAACTTTT+AGG | - | chr5_4:58630505-58630524 | None:intergenic | 35.0% |
| AAAAGTTCACCACAATGACA+AGG | + | chr5_4:58630505-58630524 | Msa0860110:intron | 35.0% | |
| ! | TATCAAGCCAAGCACATTTT+AGG | + | chr5_4:58630612-58630631 | Msa0860110:intron | 35.0% |
| CAATATGCCTAAAATGTGCT+TGG | - | chr5_4:58630622-58630641 | None:intergenic | 35.0% | |
| !! | TGTGTTTGCTGTTTGTGAAT+GGG | - | chr5_4:58630702-58630721 | None:intergenic | 35.0% |
| !! | TTGTGTTTGCTGTTTGTGAA+TGG | - | chr5_4:58630703-58630722 | None:intergenic | 35.0% |
| CAATAAGCACATGTACCAAT+TGG | + | chr5_4:58630760-58630779 | Msa0860110:intron | 35.0% | |
| ! | GGAAAATTTTAGACAAGCAG+GGG | + | chr5_4:58630955-58630974 | Msa0860110:intron | 35.0% |
| AGAAACATAGGGTTAGAATG+AGG | - | chr5_4:58631162-58631181 | None:intergenic | 35.0% | |
| CATCTTAGTGAGAGAAACAT+AGG | - | chr5_4:58631174-58631193 | None:intergenic | 35.0% | |
| ATTTCGAATCGGAGTAGTTT+GGG | - | chr5_4:58631295-58631314 | None:intergenic | 35.0% | |
| AATTTCGAATCGGAGTAGTT+TGG | - | chr5_4:58631296-58631315 | None:intergenic | 35.0% | |
| ! | TTCTAAGAGGATCCTTGAAT+TGG | + | chr5_4:58631370-58631389 | Msa0860110:intron | 35.0% |
| CTCTTTCTGATTCAAGGATT+CGG | + | chr5_4:58631538-58631557 | Msa0860110:intron | 35.0% | |
| AATTGCAGGAAGAAAATCCA+CGG | + | chr5_4:58631769-58631788 | Msa0860110:intron | 35.0% | |
| ! | AAATTCAATGGATTCCACGT+TGG | - | chr5_4:58631832-58631851 | None:intergenic | 35.0% |
| GATGATATTGGAAAACGGTT+AGG | + | chr5_4:58631944-58631963 | Msa0860110:intron | 35.0% | |
| TGGACTTTGTAACAAACTCT+TGG | + | chr5_4:58632166-58632185 | Msa0860110:intron | 35.0% | |
| GGACTTTGTAACAAACTCTT+GGG | + | chr5_4:58632167-58632186 | Msa0860110:intron | 35.0% | |
| !! | AATGGACTAAAACGAACCAA+TGG | + | chr5_4:58632419-58632438 | Msa0860110:intron | 35.0% |
| ! | GGTCTTTTCACACGAAATTT+CGG | - | chr5_4:58632479-58632498 | None:intergenic | 35.0% |
| AAAAGACTAAAATGCCCCTA+GGG | + | chr5_4:58632647-58632666 | Msa0860110:intron | 35.0% | |
| ACTTACTCAGACTACTTGAA+AGG | + | chr5_4:58632739-58632758 | Msa0860110:intron | 35.0% | |
| GTTTGCAAAATTCACATGCA+AGG | - | chr5_4:58632823-58632842 | None:intergenic | 35.0% | |
| AATTTATGCCAGAGATGCTT+TGG | + | chr5_4:58632983-58633002 | Msa0860110:intron | 35.0% | |
| GTAAACTTCATTGTGGTCTT+TGG | + | chr5_4:58633263-58633282 | Msa0860110:intron | 35.0% | |
| AGGTATCTAATCAGTACAGT+AGG | + | chr5_4:58633452-58633471 | Msa0860110:intron | 35.0% | |
| GGTATCTAATCAGTACAGTA+GGG | + | chr5_4:58633453-58633472 | Msa0860110:intron | 35.0% | |
| GTATCTAATCAGTACAGTAG+GGG | + | chr5_4:58633454-58633473 | Msa0860110:intron | 35.0% | |
| ACATACTCAGAACCAATATC+CGG | - | chr5_4:58633654-58633673 | None:intergenic | 35.0% | |
| TTGTTACTCCAATCCTGTAA+TGG | + | chr5_4:58633701-58633720 | Msa0860110:intron | 35.0% | |
| TGTTACTCCAATCCTGTAAT+GGG | + | chr5_4:58633702-58633721 | Msa0860110:intron | 35.0% | |
| CTCAGATTTACATACAAGCA+TGG | - | chr5_4:58633783-58633802 | None:intergenic | 35.0% | |
| CAAGAATGATGAACGGATAA+AGG | - | chr5_4:58633977-58633996 | None:intergenic | 35.0% | |
| !!! | TAGGTTGTTTTTAGGGCAAT+TGG | + | chr5_4:58634022-58634041 | Msa0860110:intron | 35.0% |
| !!! | TTTTTAGGGCAATTGGAAAC+TGG | + | chr5_4:58634029-58634048 | Msa0860110:intron | 35.0% |
| GTTGTGAATACCTTATTGTG+TGG | + | chr5_4:58634071-58634090 | Msa0860110:intron | 35.0% | |
| ! | CAATTTTATTCCTACAGGCA+AGG | + | chr5_4:58634112-58634131 | Msa0860110:intron | 35.0% |
| TGAAAGATTGCAGAGAAAGA+AGG | + | chr5_4:58634435-58634454 | Msa0860110:three_prime_UTR | 35.0% | |
| AATTCCTTTCTCTGCAACTT+TGG | - | chr5_4:58634463-58634482 | None:intergenic | 35.0% | |
| AGAAAGATTGCATTATGTGC+AGG | + | chr5_4:58634549-58634568 | Msa0860110:three_prime_UTR | 35.0% | |
| TTTCACGAAGAGAAGTGAGA+CGG | - | chr5_4:58628842-58628861 | None:intergenic | 40.0% | |
| AAATCTCCTCTCACTCATCA+TGG | + | chr5_4:58628859-58628878 | Msa0860110:exon | 40.0% | |
| AAATACCTTTGTGAGGGAGA+GGG | - | chr5_4:58629029-58629048 | None:intergenic | 40.0% | |
| AAAATACCTTTGTGAGGGAG+AGG | - | chr5_4:58629030-58629049 | None:intergenic | 40.0% | |
| TGCTGCTAGATTGTGATTTC+GGG | + | chr5_4:58629264-58629283 | Msa0860110:intron | 40.0% | |
| ATTCACGTGCTCCTTCAATT+TGG | + | chr5_4:58629315-58629334 | Msa0860110:intron | 40.0% | |
| TTCACGTGCTCCTTCAATTT+GGG | + | chr5_4:58629316-58629335 | Msa0860110:intron | 40.0% | |
| !! | GCTCCTTCAATTTGGGTTTT+AGG | + | chr5_4:58629323-58629342 | Msa0860110:intron | 40.0% |
| !!! | GGGTTTTAGGGTTTCTGATT+TGG | + | chr5_4:58629336-58629355 | Msa0860110:intron | 40.0% |
| !!! | GGAGGGAGAAGAATGTTTTT+TGG | + | chr5_4:58629708-58629727 | Msa0860110:intron | 40.0% |
| TTGCATACGTACCCGTTTAA+GGG | + | chr5_4:58629767-58629786 | Msa0860110:intron | 40.0% | |
| GTGGATTTGATCCCTTAAAC+GGG | - | chr5_4:58629781-58629800 | None:intergenic | 40.0% | |
| ! | GGTGGATTTGATCCCTTAAA+CGG | - | chr5_4:58629782-58629801 | None:intergenic | 40.0% |
| GGGCATGAGATTGTAAAAAG+TGG | + | chr5_4:58629887-58629906 | Msa0860110:intron | 40.0% | |
| AGTAAAGTGTGTGCATGTGT+CGG | + | chr5_4:58630155-58630174 | Msa0860110:intron | 40.0% | |
| GGATGAAGATATGAGATGGA+AGG | + | chr5_4:58630346-58630365 | Msa0860110:intron | 40.0% | |
| TAGTATGGGGAATAAAGGGA+TGG | + | chr5_4:58630413-58630432 | Msa0860110:intron | 40.0% | |
| CTATGTTTGCCTTGTCATTG+TGG | - | chr5_4:58630517-58630536 | None:intergenic | 40.0% | |
| CACAATGACAAGGCAAACAT+AGG | + | chr5_4:58630515-58630534 | Msa0860110:intron | 40.0% | |
| TCTAGATCTACGCCAATTCA+AGG | - | chr5_4:58631385-58631404 | None:intergenic | 40.0% | |
| GAATTGGCGTAGATCTAGAA+AGG | + | chr5_4:58631386-58631405 | Msa0860110:intron | 40.0% | |
| CTCTCTGTTACGTGTTTGAA+TGG | - | chr5_4:58631485-58631504 | None:intergenic | 40.0% | |
| ACGTAACAGAGAGCTTCTAA+AGG | + | chr5_4:58631492-58631511 | Msa0860110:intron | 40.0% | |
| CGAATCCTTGAATCAGAAAG+AGG | - | chr5_4:58631540-58631559 | None:intergenic | 40.0% | |
| TTCTGATTCAAGGATTCGGA+CGG | + | chr5_4:58631542-58631561 | Msa0860110:intron | 40.0% | |
| GAAAGAGGTCAAATTCGAAG+TGG | - | chr5_4:58631671-58631690 | None:intergenic | 40.0% | |
| GAAGTCAGAGAAGAAGAAAG+AGG | - | chr5_4:58631686-58631705 | None:intergenic | 40.0% | |
| ACAGAAAGAAGATCGAAGAG+AGG | - | chr5_4:58631731-58631750 | None:intergenic | 40.0% | |
| GAATCTTCATCATCAAACCG+TGG | - | chr5_4:58631789-58631808 | None:intergenic | 40.0% | |
| CTGAGTTGTTGAAATCTGTG+TGG | + | chr5_4:58632068-58632087 | Msa0860110:intron | 40.0% | |
| TTGTTGAAATCTGTGTGGCA+TGG | + | chr5_4:58632073-58632092 | Msa0860110:intron | 40.0% | |
| ! | AATGATTGGGGGCCTTTTAT+AGG | + | chr5_4:58632097-58632116 | Msa0860110:intron | 40.0% |
| TACACATGGCAGCCTATAAA+AGG | - | chr5_4:58632112-58632131 | None:intergenic | 40.0% | |
| TTACAAAGTCCAAGCACATG+TGG | - | chr5_4:58632158-58632177 | None:intergenic | 40.0% | |
| AAGTACCTCATTTAGGCCAT+TGG | - | chr5_4:58632438-58632457 | None:intergenic | 40.0% | |
| !! | TTTTAGTCGTTTTAGCCCCA+GGG | - | chr5_4:58632509-58632528 | None:intergenic | 40.0% |
| !! | ATTTTAGTCGTTTTAGCCCC+AGG | - | chr5_4:58632510-58632529 | None:intergenic | 40.0% |
| GAAAAGACTAAAATGCCCCT+AGG | + | chr5_4:58632646-58632665 | Msa0860110:intron | 40.0% | |
| AAAGACTAAAATGCCCCTAG+GGG | + | chr5_4:58632648-58632667 | Msa0860110:intron | 40.0% | |
| GACTGAGAGAAATTTGCCAT+AGG | + | chr5_4:58632782-58632801 | Msa0860110:intron | 40.0% | |
| GTTGAACATGGTTATGGCTA+TGG | + | chr5_4:58633227-58633246 | Msa0860110:intron | 40.0% | |
| CAAAAGAAAGTCCACGAACA+GGG | - | chr5_4:58633560-58633579 | None:intergenic | 40.0% | |
| ACAAAAGAAAGTCCACGAAC+AGG | - | chr5_4:58633561-58633580 | None:intergenic | 40.0% | |
| AATGTTGCCCATTACAGGAT+TGG | - | chr5_4:58633712-58633731 | None:intergenic | 40.0% | |
| GACATAATGTTGCCCATTAC+AGG | - | chr5_4:58633717-58633736 | None:intergenic | 40.0% | |
| GAGGGTTAAAGTTTGGAAAG+TGG | + | chr5_4:58633877-58633896 | Msa0860110:intron | 40.0% | |
| TATCATTGATCCTTGCCTGT+AGG | - | chr5_4:58634125-58634144 | None:intergenic | 40.0% | |
| ! | GAACTTTAAGTAGTGGGAAG+AGG | + | chr5_4:58634406-58634425 | Msa0860110:exon | 40.0% |
| AAAGGAATTGCACCTTGTGT+TGG | + | chr5_4:58634474-58634493 | Msa0860110:three_prime_UTR | 40.0% | |
| TAGCAACAATACTGTCTGCT+AGG | + | chr5_4:58634506-58634525 | Msa0860110:three_prime_UTR | 40.0% | |
| TGTCTGCTAGGAATGTTGTT+GGG | + | chr5_4:58634518-58634537 | Msa0860110:three_prime_UTR | 40.0% | |
| ! | GAAGAGAAGTGAGACGGTTT+TGG | - | chr5_4:58628836-58628855 | None:intergenic | 45.0% |
| ATGAGATGAGGTGAGGTTCT+GGG | - | chr5_4:58628888-58628907 | None:intergenic | 45.0% | |
| AGAGAGAGTGAGATGAGATG+AGG | - | chr5_4:58628914-58628933 | None:intergenic | 45.0% | |
| AGAGGATTGACAGAGGCAAT+AGG | - | chr5_4:58628941-58628960 | None:intergenic | 45.0% | |
| AAGAGTGAGAGGATTGACAG+AGG | - | chr5_4:58628948-58628967 | None:intergenic | 45.0% | |
| TGAAAGGGTTTCCTTCGTGA+GGG | - | chr5_4:58628995-58629014 | None:intergenic | 45.0% | |
| ATGAAAGGGTTTCCTTCGTG+AGG | - | chr5_4:58628996-58629015 | None:intergenic | 45.0% | |
| GCGCGCGTAGAAATTAAAGA+CGG | - | chr5_4:58629623-58629642 | None:intergenic | 45.0% | |
| CTTAAACGGGTACGTATGCA+AGG | - | chr5_4:58629768-58629787 | None:intergenic | 45.0% | |
| CTTGCATACGTACCCGTTTA+AGG | + | chr5_4:58629766-58629785 | Msa0860110:intron | 45.0% | |
| AAGAATAGAAAGAGGCCTCG+AGG | + | chr5_4:58629866-58629885 | Msa0860110:intron | 45.0% | |
| AGAATAGAAAGAGGCCTCGA+GGG | + | chr5_4:58629867-58629886 | Msa0860110:intron | 45.0% | |
| TTTACAATCTCATGCCCTCG+AGG | - | chr5_4:58629884-58629903 | None:intergenic | 45.0% | |
| ACAATGGGACTTTGATCCCA+AGG | + | chr5_4:58629992-58630011 | Msa0860110:intron | 45.0% | |
| TATGGGGAATAAAGGGATGG+AGG | + | chr5_4:58630416-58630435 | Msa0860110:intron | 45.0% | |
| ! | GAATAAAGGGATGGAGGCAT+AGG | + | chr5_4:58630422-58630441 | Msa0860110:intron | 45.0% |
| TAGCAAGAAACGCAGGAAAC+AGG | + | chr5_4:58630996-58631015 | Msa0860110:intron | 45.0% | |
| AGCAAGAAACGCAGGAAACA+GGG | + | chr5_4:58630997-58631016 | Msa0860110:intron | 45.0% | |
| TGCATAGCAACAAGACTCAC+TGG | + | chr5_4:58631024-58631043 | Msa0860110:intron | 45.0% | |
| GGGTTAGAATGAGGTTGAAC+CGG | - | chr5_4:58631153-58631172 | None:intergenic | 45.0% | |
| GCTTCGTTCTTTGCTTCAGA+TGG | + | chr5_4:58631581-58631600 | Msa0860110:intron | 45.0% | |
| TTGCTTCGCACTAGAAAACG+AGG | + | chr5_4:58631615-58631634 | Msa0860110:intron | 45.0% | |
| AACACGTTCCTCTTCTTCTC+TGG | + | chr5_4:58631643-58631662 | Msa0860110:intron | 45.0% | |
| AAGTGGAACCAGAGAAGAAG+AGG | - | chr5_4:58631654-58631673 | None:intergenic | 45.0% | |
| TCTGTGATCGTGTCTTTCAC+TGG | + | chr5_4:58631746-58631765 | Msa0860110:intron | 45.0% | |
| GTGTCTTTCACTGGAATTGC+AGG | + | chr5_4:58631755-58631774 | Msa0860110:intron | 45.0% | |
| TGTGTGGCATGGCAATGATT+GGG | + | chr5_4:58632084-58632103 | Msa0860110:intron | 45.0% | |
| ATTGGTCCAGAAGCTACACA+TGG | - | chr5_4:58632126-58632145 | None:intergenic | 45.0% | |
| ACGAACCAATGGCCTAAATG+AGG | + | chr5_4:58632430-58632449 | Msa0860110:intron | 45.0% | |
| TGAAAAGACCAAAATGCCCC+TGG | + | chr5_4:58632489-58632508 | Msa0860110:intron | 45.0% | |
| GAAAAGACCAAAATGCCCCT+GGG | + | chr5_4:58632490-58632509 | Msa0860110:intron | 45.0% | |
| AAAAGACCAAAATGCCCCTG+GGG | + | chr5_4:58632491-58632510 | Msa0860110:intron | 45.0% | |
| !! | TTTAGTCGTTTTAGCCCCAG+GGG | - | chr5_4:58632508-58632527 | None:intergenic | 45.0% |
| GCTGTCAAAGAGTCATCACA+TGG | - | chr5_4:58633390-58633409 | None:intergenic | 45.0% | |
| CACATTCAAAACCCTGTTCG+TGG | + | chr5_4:58633583-58633602 | Msa0860110:intron | 45.0% | |
| CATTTCTTCCTCTTGCTCCT+TGG | - | chr5_4:58634387-58634406 | None:intergenic | 45.0% | |
| GGTTCCAAAGTTGCAGAGAA+AGG | + | chr5_4:58634456-58634475 | Msa0860110:three_prime_UTR | 45.0% | |
| TTGCACCTTGTGTTGGAAAC+TGG | + | chr5_4:58634481-58634500 | Msa0860110:three_prime_UTR | 45.0% | |
| CTACACCAGTTTCCAACACA+AGG | - | chr5_4:58634489-58634508 | None:intergenic | 45.0% | |
| CTGTCTGCTAGGAATGTTGT+TGG | + | chr5_4:58634517-58634536 | Msa0860110:three_prime_UTR | 45.0% | |
| GTCTGCTAGGAATGTTGTTG+GGG | + | chr5_4:58634519-58634538 | Msa0860110:three_prime_UTR | 45.0% | |
| TGCATTATGTGCAGGTAGCT+TGG | + | chr5_4:58634557-58634576 | Msa0860110:three_prime_UTR | 45.0% | |
| !! | AAAGTAATTAATAATAAAAT+TGG | + | chr5_4:58632344-58632363 | Msa0860110:intron | 5.0% |
| GGGTTTCCATGATGAGTGAG+AGG | - | chr5_4:58628868-58628887 | None:intergenic | 50.0% | |
| GATGAGATGAGGTGAGGTTC+TGG | - | chr5_4:58628889-58628908 | None:intergenic | 50.0% | |
| GAGATGAGGTCGATGAGATG+AGG | - | chr5_4:58628900-58628919 | None:intergenic | 50.0% | |
| ! | CGGGTTTCTGAAAGAGTGAG+AGG | - | chr5_4:58628959-58628978 | None:intergenic | 50.0% |
| AGCAAAACCCTTGAGAACCG+AGG | + | chr5_4:58629531-58629550 | Msa0860110:intron | 50.0% | |
| !! | TCCGGGAGTTGTTTTCGCTA+CGG | + | chr5_4:58629554-58629573 | Msa0860110:intron | 50.0% |
| !! | GAGTTGTTTTCGCTACGGGA+AGG | + | chr5_4:58629559-58629578 | Msa0860110:intron | 50.0% |
| !! | TTTCGCTACGGGAAGGTGTT+AGG | + | chr5_4:58629566-58629585 | Msa0860110:intron | 50.0% |
| GCAAGAAACGCAGGAAACAG+GGG | + | chr5_4:58630998-58631017 | Msa0860110:intron | 50.0% | |
| CAAGAAACGCAGGAAACAGG+GGG | + | chr5_4:58630999-58631018 | Msa0860110:intron | 50.0% | |
| ! | CAGACCATGGGTTGAACCAT+GGG | + | chr5_4:58631091-58631110 | Msa0860110:intron | 50.0% |
| TCAACCCATGGTTCAACCCA+TGG | - | chr5_4:58631098-58631117 | None:intergenic | 50.0% | |
| ! | GGTTGAACCATGGGTTGAAC+CGG | + | chr5_4:58631100-58631119 | Msa0860110:intron | 50.0% |
| ! | CTCAAAACCGGTTCAACCCA+TGG | - | chr5_4:58631110-58631129 | None:intergenic | 50.0% |
| TCGGACGGAGAAGTTTGAGA+CGG | + | chr5_4:58631557-58631576 | Msa0860110:intron | 50.0% | |
| AGAATCGCTGAGAACCAACG+TGG | + | chr5_4:58631815-58631834 | Msa0860110:intron | 50.0% | |
| CTGTGTGGCATGGCAATGAT+TGG | + | chr5_4:58632083-58632102 | Msa0860110:intron | 50.0% | |
| GTGTGGCATGGCAATGATTG+GGG | + | chr5_4:58632085-58632104 | Msa0860110:intron | 50.0% | |
| TGTGGCATGGCAATGATTGG+GGG | + | chr5_4:58632086-58632105 | Msa0860110:intron | 50.0% | |
| CACATGTGGCATGCTGCTAT+TGG | - | chr5_4:58632144-58632163 | None:intergenic | 50.0% | |
| CACGAAATTTCGGCAGAGAG+AGG | - | chr5_4:58632469-58632488 | None:intergenic | 50.0% | |
| !!! | TTTTAGCCCCAGGGGCATTT+TGG | - | chr5_4:58632500-58632519 | None:intergenic | 50.0% |
| TTGAGTCAGTCTAGCCCCTA+GGG | - | chr5_4:58632665-58632684 | None:intergenic | 50.0% | |
| TTTGAGTCAGTCTAGCCCCT+AGG | - | chr5_4:58632666-58632685 | None:intergenic | 50.0% | |
| ! | GGACTTTGCCAAAGCATCTC+TGG | - | chr5_4:58632994-58633013 | None:intergenic | 50.0% |
| CGCATTCAAAACCCTGTTCG+TGG | + | chr5_4:58633546-58633565 | Msa0860110:intron | 50.0% | |
| CCTGAGAAAGTCCACGAACA+GGG | - | chr5_4:58633597-58633616 | None:intergenic | 50.0% | |
| TCCTGAGAAAGTCCACGAAC+AGG | - | chr5_4:58633598-58633617 | None:intergenic | 50.0% | |
| TAACAGGACCAAGGAGCAAG+AGG | + | chr5_4:58634376-58634395 | Msa0860110:intron | 50.0% | |
| GAGGTCGATGAGATGAGGTG+AGG | - | chr5_4:58628895-58628914 | None:intergenic | 55.0% | |
| TGAGGGTTGACATCTGCGTC+GGG | - | chr5_4:58628978-58628997 | None:intergenic | 55.0% | |
| GTGAGGGTTGACATCTGCGT+CGG | - | chr5_4:58628979-58628998 | None:intergenic | 55.0% | |
| GCAGATGTCAACCCTCACGA+AGG | + | chr5_4:58628981-58629000 | Msa0860110:CDS | 55.0% | |
| AGGGCGATGGAGCGATGAAA+GGG | - | chr5_4:58629010-58629029 | None:intergenic | 55.0% | |
| AACCCTTGAGAACCGAGGTC+CGG | + | chr5_4:58629536-58629555 | Msa0860110:intron | 55.0% | |
| CGAAAACAACTCCCGGACCT+CGG | - | chr5_4:58629551-58629570 | None:intergenic | 55.0% | |
| CCCGTAGCGAAAACAACTCC+CGG | - | chr5_4:58629558-58629577 | None:intergenic | 55.0% | |
| !! | CCGGGAGTTGTTTTCGCTAC+GGG | + | chr5_4:58629555-58629574 | Msa0860110:intron | 55.0% |
| ! | GCATGTGTCGGTGCTTGTGT+CGG | + | chr5_4:58630167-58630186 | Msa0860110:intron | 55.0% |
| AGCAACAAGACTCACTGGCG+TGG | + | chr5_4:58631029-58631048 | Msa0860110:intron | 55.0% | |
| AGTTGGGCTCAGGGAGAGAA+AGG | + | chr5_4:58631053-58631072 | Msa0860110:intron | 55.0% | |
| GTTGGGCTCAGGGAGAGAAA+GGG | + | chr5_4:58631054-58631073 | Msa0860110:intron | 55.0% | |
| TGGGTCATGGAGCAGACCAT+GGG | + | chr5_4:58631079-58631098 | Msa0860110:intron | 55.0% | |
| ! | GCAGACCATGGGTTGAACCA+TGG | + | chr5_4:58631090-58631109 | Msa0860110:intron | 55.0% |
| TCGGAGGAGTTGAGCTTCGT+CGG | - | chr5_4:58631237-58631256 | None:intergenic | 55.0% | |
| ! | AGTAGTTTGGGACTCCGACG+CGG | - | chr5_4:58631283-58631302 | None:intergenic | 55.0% |
| AGGCTGCCATGTGTAGCTTC+TGG | + | chr5_4:58632117-58632136 | Msa0860110:intron | 55.0% | |
| AGCAGCATGCCACATGTGCT+TGG | + | chr5_4:58632146-58632165 | Msa0860110:intron | 55.0% | |
| TGAGTCAGTCTAGCCCCTAG+GGG | - | chr5_4:58632664-58632683 | None:intergenic | 55.0% | |
| CCCTGTTCGTGGACTTTCTC+AGG | + | chr5_4:58633594-58633613 | Msa0860110:intron | 55.0% | |
| GAGGGCGATGGAGCGATGAA+AGG | - | chr5_4:58629011-58629030 | None:intergenic | 60.0% | |
| CTTTGTGAGGGAGAGGGCGA+TGG | - | chr5_4:58629023-58629042 | None:intergenic | 60.0% | |
| CATCGCCCTCTCCCTCACAA+AGG | + | chr5_4:58629021-58629040 | Msa0860110:CDS | 60.0% | |
| ACCCTTGAGAACCGAGGTCC+GGG | + | chr5_4:58629537-58629556 | Msa0860110:intron | 60.0% | |
| TCCCGGACCTCGGTTCTCAA+GGG | - | chr5_4:58629541-58629560 | None:intergenic | 60.0% | |
| AGACTCACTGGCGTGGCAGT+TGG | + | chr5_4:58631036-58631055 | Msa0860110:intron | 60.0% | |
| GACTCACTGGCGTGGCAGTT+GGG | + | chr5_4:58631037-58631056 | Msa0860110:intron | 60.0% | |
| CTCAGGGAGAGAAAGGGCCT+GGG | + | chr5_4:58631060-58631079 | Msa0860110:intron | 60.0% | |
| GAGAGAAAGGGCCTGGGTCA+TGG | + | chr5_4:58631066-58631085 | Msa0860110:intron | 60.0% | |
| CATGGTCTGCTCCATGACCC+AGG | - | chr5_4:58631080-58631099 | None:intergenic | 60.0% | |
| CTGGGTCATGGAGCAGACCA+TGG | + | chr5_4:58631078-58631097 | Msa0860110:intron | 60.0% | |
| GAAGCTCAACTCCTCCGACG+TGG | + | chr5_4:58631239-58631258 | Msa0860110:intron | 60.0% | |
| CTCCCGGACCTCGGTTCTCA+AGG | - | chr5_4:58629542-58629561 | None:intergenic | 65.0% | |
| TGGCGTGGCAGTTGGGCTCA+GGG | + | chr5_4:58631044-58631063 | Msa0860110:intron | 65.0% | |
| GCTCAGGGAGAGAAAGGGCC+TGG | + | chr5_4:58631059-58631078 | Msa0860110:intron | 65.0% | |
| GCTCAACTCCTCCGACGTGG+TGG | + | chr5_4:58631242-58631261 | Msa0860110:intron | 65.0% | |
| AACTCCTCCGACGTGGTGGC+CGG | + | chr5_4:58631246-58631265 | Msa0860110:intron | 65.0% | |
| ! | AGTTTGGGACTCCGACGCGG+CGG | - | chr5_4:58631280-58631299 | None:intergenic | 65.0% |
| CTGGCGTGGCAGTTGGGCTC+AGG | + | chr5_4:58631043-58631062 | Msa0860110:intron | 70.0% | |
| GCTTCCACCGGCCACCACGT+CGG | - | chr5_4:58631256-58631275 | None:intergenic | 70.0% | |
| TCCTCCGACGTGGTGGCCGG+TGG | + | chr5_4:58631249-58631268 | Msa0860110:intron | 75.0% | |
| TCCACCGGCCACCACGTCGG+AGG | - | chr5_4:58631253-58631272 | None:intergenic | 75.0% | |
| ! | CGACGCGGCGGCGCTTCCAC+CGG | - | chr5_4:58631268-58631287 | None:intergenic | 80.0% |
| !!! | CGGTGGAAGCGCCGCCGCGT+CGG | + | chr5_4:58631266-58631285 | Msa0860110:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 58628826 | 58634594 | 58628826 | ID=Msa0860110;Name=Msa0860110 |
| chr5_4 | mRNA | 58628826 | 58634594 | 58628826 | ID=Msa0860110-mRNA-1;Parent=Msa0860110;Name=Msa0860110-mRNA-1;_AED=0.29;_eAED=0.29;_QI=52|0|1|1|0|0.5|2|180|65 |
| chr5_4 | exon | 58628826 | 58629042 | 58628826 | ID=Msa0860110-mRNA-1:exon:17919;Parent=Msa0860110-mRNA-1 |
| chr5_4 | exon | 58634382 | 58634594 | 58634382 | ID=Msa0860110-mRNA-1:exon:17920;Parent=Msa0860110-mRNA-1 |
| chr5_4 | five_prime_UTR | 58628826 | 58628877 | 58628826 | ID=Msa0860110-mRNA-1:five_prime_utr;Parent=Msa0860110-mRNA-1 |
| chr5_4 | CDS | 58628878 | 58629042 | 58628878 | ID=Msa0860110-mRNA-1:cds;Parent=Msa0860110-mRNA-1 |
| chr5_4 | CDS | 58634382 | 58634414 | 58634382 | ID=Msa0860110-mRNA-1:cds;Parent=Msa0860110-mRNA-1 |
| chr5_4 | three_prime_UTR | 58634415 | 58634594 | 58634415 | ID=Msa0860110-mRNA-1:three_prime_utr;Parent=Msa0860110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
