Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944550 | B7FJV5 | 92.373 | 236 | 10 | 1 | 1 | 236 | 1 | 228 | 6.27e-150 | 426 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa0944550 | 0.810036 | 1.407224e-50 | -8.615850e-47 |
| Msa0014800 | Msa0944550 | 0.810018 | 1.420235e-50 | -8.615850e-47 |
| Msa0018210 | Msa0944550 | 0.806789 | 6.934869e-50 | -8.615850e-47 |
| Msa0023470 | Msa0944550 | 0.817312 | 3.519799e-52 | -8.615850e-47 |
| Msa0036160 | Msa0944550 | 0.815295 | 9.945129e-52 | -8.615850e-47 |
| Msa0037880 | Msa0944550 | 0.806433 | 8.246090e-50 | -8.615850e-47 |
| Msa0039330 | Msa0944550 | 0.820652 | 6.125137e-53 | -8.615850e-47 |
| Msa0042980 | Msa0944550 | -0.804473 | 2.124086e-49 | -8.615850e-47 |
| Msa0051930 | Msa0944550 | 0.818584 | 1.816430e-52 | -8.615850e-47 |
| Msa0052030 | Msa0944550 | 0.845048 | 5.178361e-59 | -8.615850e-47 |
| Msa0061150 | Msa0944550 | 0.827307 | 1.681478e-54 | -8.615850e-47 |
| Msa0071550 | Msa0944550 | 0.832821 | 7.595592e-56 | -8.615850e-47 |
| Msa0078750 | Msa0944550 | 0.809070 | 2.268990e-50 | -8.615850e-47 |
| Msa0086890 | Msa0944550 | 0.818798 | 1.623942e-52 | -8.615850e-47 |
| Msa0102120 | Msa0944550 | 0.825255 | 5.177725e-54 | -8.615850e-47 |
| Msa0105700 | Msa0944550 | 0.851470 | 8.691870e-61 | -8.615850e-47 |
| Msa0111310 | Msa0944550 | 0.813651 | 2.297860e-51 | -8.615850e-47 |
| Msa0119850 | Msa0944550 | 0.820834 | 5.564260e-53 | -8.615850e-47 |
| Msa0120340 | Msa0944550 | 0.804723 | 1.883360e-49 | -8.615850e-47 |
| Msa0607540 | Msa0944550 | 0.838827 | 2.281144e-57 | -8.615850e-47 |
| Msa0608710 | Msa0944550 | 0.840808 | 6.954776e-58 | -8.615850e-47 |
| Msa0615270 | Msa0944550 | -0.835839 | 1.328596e-56 | -8.615850e-47 |
| Msa0628740 | Msa0944550 | 0.836888 | 7.184172e-57 | -8.615850e-47 |
| Msa0631990 | Msa0944550 | 0.809777 | 1.600301e-50 | -8.615850e-47 |
| Msa0635380 | Msa0944550 | 0.836772 | 7.693243e-57 | -8.615850e-47 |
| Msa0640380 | Msa0944550 | 0.845356 | 4.273810e-59 | -8.615850e-47 |
| Msa0647830 | Msa0944550 | 0.855758 | 5.087929e-62 | -8.615850e-47 |
| Msa0649130 | Msa0944550 | 0.824474 | 7.917082e-54 | -8.615850e-47 |
| Msa0653490 | Msa0944550 | 0.847836 | 8.986168e-60 | -8.615850e-47 |
| Msa0660300 | Msa0944550 | 0.846661 | 1.887756e-59 | -8.615850e-47 |
| Msa0663710 | Msa0944550 | 0.808768 | 2.633354e-50 | -8.615850e-47 |
| Msa0663920 | Msa0944550 | 0.805672 | 1.192151e-49 | -8.615850e-47 |
| Msa0666140 | Msa0944550 | 0.833325 | 5.689765e-56 | -8.615850e-47 |
| Msa0669440 | Msa0944550 | 0.814313 | 1.641579e-51 | -8.615850e-47 |
| Msa0670660 | Msa0944550 | 0.827728 | 1.332965e-54 | -8.615850e-47 |
| Msa0673460 | Msa0944550 | 0.807806 | 4.222043e-50 | -8.615850e-47 |
| Msa0678820 | Msa0944550 | 0.863242 | 2.862196e-64 | -8.615850e-47 |
| Msa0688670 | Msa0944550 | 0.818569 | 1.830538e-52 | -8.615850e-47 |
| Msa0690440 | Msa0944550 | 0.848744 | 5.042440e-60 | -8.615850e-47 |
| Msa0698310 | Msa0944550 | -0.834046 | 3.757657e-56 | -8.615850e-47 |
| Msa0704730 | Msa0944550 | 0.820412 | 6.953410e-53 | -8.615850e-47 |
| Msa0722910 | Msa0944550 | 0.807175 | 5.746312e-50 | -8.615850e-47 |
| Msa0722920 | Msa0944550 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0723110 | Msa0944550 | 0.837621 | 4.665899e-57 | -8.615850e-47 |
| Msa0724560 | Msa0944550 | 0.824909 | 6.251310e-54 | -8.615850e-47 |
| Msa0731180 | Msa0944550 | 0.828107 | 1.080540e-54 | -8.615850e-47 |
| Msa0749930 | Msa0944550 | 0.824335 | 8.535808e-54 | -8.615850e-47 |
| Msa0756310 | Msa0944550 | 0.838970 | 2.095851e-57 | -8.615850e-47 |
| Msa0766310 | Msa0944550 | 0.806459 | 8.140947e-50 | -8.615850e-47 |
| Msa0771720 | Msa0944550 | 0.846989 | 1.535247e-59 | -8.615850e-47 |
| Msa0773840 | Msa0944550 | 0.814032 | 1.894189e-51 | -8.615850e-47 |
| Msa0782470 | Msa0944550 | 0.813439 | 2.558166e-51 | -8.615850e-47 |
| Msa0782490 | Msa0944550 | 0.815118 | 1.088732e-51 | -8.615850e-47 |
| Msa0795920 | Msa0944550 | 0.816929 | 4.292182e-52 | -8.615850e-47 |
| Msa0798860 | Msa0944550 | 0.832594 | 8.646344e-56 | -8.615850e-47 |
| Msa0801360 | Msa0944550 | 0.843405 | 1.429881e-58 | -8.615850e-47 |
| Msa0807030 | Msa0944550 | 0.806703 | 7.231625e-50 | -8.615850e-47 |
| Msa0830420 | Msa0944550 | 0.822690 | 2.069642e-53 | -8.615850e-47 |
| Msa0835730 | Msa0944550 | 0.844529 | 7.146281e-59 | -8.615850e-47 |
| Msa0839830 | Msa0944550 | 0.837453 | 5.151941e-57 | -8.615850e-47 |
| Msa0152170 | Msa0944550 | 0.859345 | 4.410444e-63 | -8.615850e-47 |
| Msa0178350 | Msa0944550 | 0.814658 | 1.377356e-51 | -8.615850e-47 |
| Msa0178860 | Msa0944550 | -0.827874 | 1.229417e-54 | -8.615850e-47 |
| Msa0178930 | Msa0944550 | 0.800822 | 1.203441e-48 | -8.615850e-47 |
| Msa0185640 | Msa0944550 | -0.802439 | 5.607258e-49 | -8.615850e-47 |
| Msa0190250 | Msa0944550 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0206010 | Msa0944550 | 0.807337 | 5.309876e-50 | -8.615850e-47 |
| Msa0216530 | Msa0944550 | 0.803576 | 3.263334e-49 | -8.615850e-47 |
| Msa0222340 | Msa0944550 | 0.853628 | 2.106797e-61 | -8.615850e-47 |
| Msa0223010 | Msa0944550 | 0.817509 | 3.179142e-52 | -8.615850e-47 |
| Msa0226890 | Msa0944550 | 0.816976 | 4.189503e-52 | -8.615850e-47 |
| Msa0379640 | Msa0944550 | 0.833393 | 5.473410e-56 | -8.615850e-47 |
| Msa0380040 | Msa0944550 | 0.813850 | 2.077544e-51 | -8.615850e-47 |
| Msa0388840 | Msa0944550 | 0.912784 | 1.309553e-83 | -8.615850e-47 |
| Msa0389360 | Msa0944550 | 0.831490 | 1.620375e-55 | -8.615850e-47 |
| Msa0389810 | Msa0944550 | 0.888358 | 6.335270e-73 | -8.615850e-47 |
| Msa0394340 | Msa0944550 | 0.860600 | 1.845436e-63 | -8.615850e-47 |
| Msa0397390 | Msa0944550 | 0.809942 | 1.474566e-50 | -8.615850e-47 |
| Msa0399340 | Msa0944550 | 0.811204 | 7.869871e-51 | -8.615850e-47 |
| Msa0409080 | Msa0944550 | 0.802909 | 4.485583e-49 | -8.615850e-47 |
| Msa0412840 | Msa0944550 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0429290 | Msa0944550 | 0.803244 | 3.824164e-49 | -8.615850e-47 |
| Msa0433410 | Msa0944550 | -0.810294 | 1.237971e-50 | -8.615850e-47 |
| Msa0433530 | Msa0944550 | 0.824608 | 7.360939e-54 | -8.615850e-47 |
| Msa0442200 | Msa0944550 | 0.855060 | 8.124435e-62 | -8.615850e-47 |
| Msa0442850 | Msa0944550 | 0.816400 | 5.640395e-52 | -8.615850e-47 |
| Msa0443050 | Msa0944550 | 0.819762 | 9.796912e-53 | -8.615850e-47 |
| Msa0449760 | Msa0944550 | 0.809124 | 2.209188e-50 | -8.615850e-47 |
| Msa0457010 | Msa0944550 | 0.809175 | 2.154957e-50 | -8.615850e-47 |
| Msa0465680 | Msa0944550 | -0.802107 | 6.564435e-49 | -8.615850e-47 |
| Msa0468130 | Msa0944550 | 0.885950 | 5.226128e-72 | -8.615850e-47 |
| Msa0473240 | Msa0944550 | 0.801811 | 7.550013e-49 | -8.615850e-47 |
| Msa0475240 | Msa0944550 | 0.802114 | 6.540986e-49 | -8.615850e-47 |
| Msa0475490 | Msa0944550 | 0.839772 | 1.297427e-57 | -8.615850e-47 |
| Msa0475580 | Msa0944550 | 0.819274 | 1.265621e-52 | -8.615850e-47 |
| Msa0477130 | Msa0944550 | -0.831289 | 1.815812e-55 | -8.615850e-47 |
| Msa0477260 | Msa0944550 | 0.828841 | 7.183672e-55 | -8.615850e-47 |
| Msa0482190 | Msa0944550 | -0.858810 | 6.380096e-63 | -8.615850e-47 |
| Msa0263840 | Msa0944550 | 0.829977 | 3.805415e-55 | -8.615850e-47 |
| Msa0276770 | Msa0944550 | 0.826526 | 2.584614e-54 | -8.615850e-47 |
| Msa0301680 | Msa0944550 | 0.832209 | 1.077208e-55 | -8.615850e-47 |
| Msa0307470 | Msa0944550 | 0.828189 | 1.032424e-54 | -8.615850e-47 |
| Msa0307950 | Msa0944550 | 0.800187 | 1.621213e-48 | -8.615850e-47 |
| Msa0309550 | Msa0944550 | 0.837941 | 3.861777e-57 | -8.615850e-47 |
| Msa0315290 | Msa0944550 | 0.830038 | 3.678411e-55 | -8.615850e-47 |
| Msa0319170 | Msa0944550 | 0.804074 | 2.572301e-49 | -8.615850e-47 |
| Msa0326110 | Msa0944550 | 0.805967 | 1.033730e-49 | -8.615850e-47 |
| Msa0339620 | Msa0944550 | 0.822631 | 2.136516e-53 | -8.615850e-47 |
| Msa0342340 | Msa0944550 | -0.801730 | 7.844428e-49 | -8.615850e-47 |
| Msa0344530 | Msa0944550 | 0.803171 | 3.959634e-49 | -8.615850e-47 |
| Msa0344830 | Msa0944550 | 0.823493 | 1.344833e-53 | -8.615850e-47 |
| Msa0344910 | Msa0944550 | 0.808142 | 3.580560e-50 | -8.615850e-47 |
| Msa0347610 | Msa0944550 | 0.852979 | 3.235755e-61 | -8.615850e-47 |
| Msa0485500 | Msa0944550 | -0.853902 | 1.757858e-61 | -8.615850e-47 |
| Msa0489610 | Msa0944550 | 0.847303 | 1.259099e-59 | -8.615850e-47 |
| Msa0490490 | Msa0944550 | 0.802857 | 4.597142e-49 | -8.615850e-47 |
| Msa0493630 | Msa0944550 | 0.800552 | 1.365886e-48 | -8.615850e-47 |
| Msa0500720 | Msa0944550 | 0.814395 | 1.574647e-51 | -8.615850e-47 |
| Msa0502100 | Msa0944550 | 0.802324 | 5.920927e-49 | -8.615850e-47 |
| Msa0527250 | Msa0944550 | 0.802804 | 4.714767e-49 | -8.615850e-47 |
| Msa0536220 | Msa0944550 | 0.811591 | 6.485662e-51 | -8.615850e-47 |
| Msa0540070 | Msa0944550 | 0.847450 | 1.147999e-59 | -8.615850e-47 |
| Msa0543900 | Msa0944550 | 0.846725 | 1.813134e-59 | -8.615850e-47 |
| Msa0553220 | Msa0944550 | -0.803091 | 4.112156e-49 | -8.615850e-47 |
| Msa0553460 | Msa0944550 | 0.846653 | 1.897031e-59 | -8.615850e-47 |
| Msa0561130 | Msa0944550 | -0.860893 | 1.503309e-63 | -8.615850e-47 |
| Msa0561160 | Msa0944550 | -0.811041 | 8.535782e-51 | -8.615850e-47 |
| Msa0562440 | Msa0944550 | 0.801736 | 7.822215e-49 | -8.615850e-47 |
| Msa0564510 | Msa0944550 | 0.831785 | 1.371281e-55 | -8.615850e-47 |
| Msa0568240 | Msa0944550 | 0.848590 | 5.561851e-60 | -8.615850e-47 |
| Msa0570330 | Msa0944550 | 0.859767 | 3.292215e-63 | -8.615850e-47 |
| Msa0577120 | Msa0944550 | 0.835380 | 1.735235e-56 | -8.615850e-47 |
| Msa0579130 | Msa0944550 | 0.803765 | 2.981868e-49 | -8.615850e-47 |
| Msa0588240 | Msa0944550 | 0.808625 | 2.824394e-50 | -8.615850e-47 |
| Msa0595850 | Msa0944550 | 0.804604 | 1.994592e-49 | -8.615850e-47 |
| Msa0599040 | Msa0944550 | 0.828471 | 8.825140e-55 | -8.615850e-47 |
| Msa0599580 | Msa0944550 | 0.816531 | 5.270747e-52 | -8.615850e-47 |
| Msa0599770 | Msa0944550 | 0.848523 | 5.804239e-60 | -8.615850e-47 |
| Msa0843250 | Msa0944550 | 0.835076 | 2.070932e-56 | -8.615850e-47 |
| Msa0848900 | Msa0944550 | 0.820810 | 5.635473e-53 | -8.615850e-47 |
| Msa0860410 | Msa0944550 | 0.803970 | 2.703263e-49 | -8.615850e-47 |
| Msa0869120 | Msa0944550 | 0.812079 | 5.078941e-51 | -8.615850e-47 |
| Msa0870150 | Msa0944550 | 0.823550 | 1.303972e-53 | -8.615850e-47 |
| Msa0878880 | Msa0944550 | 0.891268 | 4.640217e-74 | -8.615850e-47 |
| Msa0880110 | Msa0944550 | 0.821720 | 3.474399e-53 | -8.615850e-47 |
| Msa0903400 | Msa0944550 | 0.820787 | 5.703524e-53 | -8.615850e-47 |
| Msa0927670 | Msa0944550 | 0.801085 | 1.063212e-48 | -8.615850e-47 |
| Msa0935850 | Msa0944550 | 0.843700 | 1.192432e-58 | -8.615850e-47 |
| Msa0944550 | Msa0947760 | 0.824927 | 6.189790e-54 | -8.615850e-47 |
| Msa0944550 | Msa0960160 | 0.801764 | 7.720766e-49 | -8.615850e-47 |
| Msa0944550 | Msa0971020 | 0.801734 | 7.831359e-49 | -8.615850e-47 |
| Msa0944550 | Msa0979100 | 0.825234 | 5.238595e-54 | -8.615850e-47 |
| Msa0944550 | Msa0982270 | 0.894186 | 3.125945e-75 | -8.615850e-47 |
| Msa0944550 | Msa0992490 | -0.823407 | 1.408779e-53 | -8.615850e-47 |
| Msa0944550 | Msa1002480 | 0.828022 | 1.132446e-54 | -8.615850e-47 |
| Msa0944550 | Msa1012830 | 0.828346 | 9.462199e-55 | -8.615850e-47 |
| Msa0944550 | Msa1012920 | 0.806667 | 7.359428e-50 | -8.615850e-47 |
| Msa0944550 | Msa1021340 | 0.806229 | 9.104561e-50 | -8.615850e-47 |
| Msa0944550 | Msa1021540 | 0.815986 | 6.978907e-52 | -8.615850e-47 |
| Msa0944550 | Msa1026760 | 0.805550 | 1.264648e-49 | -8.615850e-47 |
| Msa0944550 | Msa1026790 | 0.807610 | 4.646239e-50 | -8.615850e-47 |
| Msa0944550 | Msa1031810 | 0.848703 | 5.175719e-60 | -8.615850e-47 |
| Msa0944550 | Msa1038520 | 0.802925 | 4.450797e-49 | -8.615850e-47 |
| Msa0944550 | Msa1054410 | 0.866445 | 2.837346e-65 | -8.615850e-47 |
| Msa0944550 | Msa1070850 | 0.887234 | 1.706589e-72 | -8.615850e-47 |
| Msa0944550 | Msa1074530 | 0.813714 | 2.225927e-51 | -8.615850e-47 |
| Msa0944550 | Msa1079730 | -0.824895 | 6.299808e-54 | -8.615850e-47 |
| Msa0944550 | Msa1085920 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0944550 | Msa1090260 | 0.825006 | 5.931535e-54 | -8.615850e-47 |
| Msa0944550 | Msa1092090 | 0.845285 | 4.466428e-59 | -8.615850e-47 |
| Msa0944550 | Msa1100480 | 0.807854 | 4.123258e-50 | -8.615850e-47 |
| Msa0944550 | Msa1105530 | 0.803513 | 3.362789e-49 | -8.615850e-47 |
| Msa0944550 | Msa1118750 | 0.873108 | 1.898356e-67 | -8.615850e-47 |
| Msa0944550 | Msa1124540 | -0.813233 | 2.839786e-51 | -8.615850e-47 |
| Msa0944550 | Msa1129210 | 0.830978 | 2.165163e-55 | -8.615850e-47 |
| Msa0944550 | Msa1130110 | 0.826677 | 2.378559e-54 | -8.615850e-47 |
| Msa0944550 | Msa1142500 | 0.805103 | 1.569277e-49 | -8.615850e-47 |
| Msa0944550 | Msa1143270 | 0.832946 | 7.072559e-56 | -8.615850e-47 |
| Msa0944550 | Msa1143930 | -0.832662 | 8.316873e-56 | -8.615850e-47 |
| Msa0944550 | Msa1148920 | 0.809014 | 2.332530e-50 | -8.615850e-47 |
| Msa0944550 | Msa1151710 | 0.801054 | 1.079231e-48 | -8.615850e-47 |
| Msa0944550 | Msa1158670 | 0.901322 | 3.011410e-78 | -8.615850e-47 |
| Msa0944550 | Msa1162550 | -0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0944550 | Msa1168040 | -0.823462 | 1.367376e-53 | -8.615850e-47 |
| Msa0944550 | Msa1171870 | 0.811447 | 6.970227e-51 | -8.615850e-47 |
| Msa0944550 | Msa1172230 | 0.802897 | 4.510664e-49 | -8.615850e-47 |
| Msa0944550 | Msa1172930 | 0.810158 | 1.324465e-50 | -8.615850e-47 |
| Msa0944550 | Msa1183100 | -0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0944550 | Msa1187520 | 0.846439 | 2.170822e-59 | -8.615850e-47 |
| Msa0944550 | Msa1187780 | 0.804410 | 2.188970e-49 | -8.615850e-47 |
| Msa0944550 | Msa1199560 | 0.836684 | 8.101938e-57 | -8.615850e-47 |
| Msa0944550 | Msa1204980 | -0.800255 | 1.570191e-48 | -8.615850e-47 |
| Msa0944550 | Msa1205010 | -0.804564 | 2.033582e-49 | -8.615850e-47 |
| Msa0944550 | Msa1205130 | 0.812165 | 4.863811e-51 | -8.615850e-47 |
| Msa0944550 | Msa1206020 | 0.805578 | 1.247599e-49 | -8.615850e-47 |
| Msa0944550 | Msa1207380 | 0.816319 | 5.880079e-52 | -8.615850e-47 |
| Msa0944550 | Msa1212170 | 0.839457 | 1.566611e-57 | -8.615850e-47 |
| Msa0944550 | Msa1212250 | 0.837910 | 3.931826e-57 | -8.615850e-47 |
| Msa0944550 | Msa1213440 | -0.800926 | 1.145733e-48 | -8.615850e-47 |
| Msa0944550 | Msa1217430 | -0.845941 | 2.966580e-59 | -8.615850e-47 |
| Msa0944550 | Msa1217810 | 0.821948 | 3.077714e-53 | -8.615850e-47 |
| Msa0944550 | Msa1217830 | 0.821702 | 3.507622e-53 | -8.615850e-47 |
| Msa0944550 | Msa1225730 | -0.802035 | 6.791388e-49 | -8.615850e-47 |
| Msa0944550 | Msa1228310 | 0.811681 | 6.198985e-51 | -8.615850e-47 |
| Msa0944550 | Msa1230830 | 0.821760 | 3.401050e-53 | -8.615850e-47 |
| Msa0944550 | Msa1233500 | 0.843545 | 1.311700e-58 | -8.615850e-47 |
| Msa0944550 | Msa1233890 | 0.811794 | 5.858575e-51 | -8.615850e-47 |
| Msa0944550 | Msa1241990 | 0.804278 | 2.332917e-49 | -8.615850e-47 |
| Msa0944550 | Msa1250890 | 0.807112 | 5.925298e-50 | -8.615850e-47 |
| Msa0944550 | Msa1252070 | 0.824164 | 9.364357e-54 | -8.615850e-47 |
| Msa0944550 | Msa1256540 | -0.802856 | 4.599898e-49 | -8.615850e-47 |
| Msa0944550 | Msa1258380 | -0.857447 | 1.622121e-62 | -8.615850e-47 |
| Msa0944550 | Msa1269940 | 0.807979 | 3.880184e-50 | -8.615850e-47 |
| Msa0944550 | Msa1271200 | 0.826290 | 2.941670e-54 | -8.615850e-47 |
| Msa0944550 | Msa1276440 | 0.825026 | 5.866381e-54 | -8.615850e-47 |
| Msa0944550 | Msa1279210 | 0.860220 | 2.403467e-63 | -8.615850e-47 |
| Msa0944550 | Msa1282920 | 0.837181 | 6.047970e-57 | -8.615850e-47 |
| Msa0944550 | Msa1289010 | 0.803904 | 2.790303e-49 | -8.615850e-47 |
| Msa0944550 | Msa1292730 | 0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa0944550 | Msa1296880 | 0.808932 | 2.429044e-50 | -8.615850e-47 |
| Msa0944550 | Msa1300350 | -0.848468 | 6.011378e-60 | -8.615850e-47 |
| Msa0944550 | Msa1302100 | 0.809001 | 2.347424e-50 | -8.615850e-47 |
| Msa0944550 | Msa1302190 | -0.841014 | 6.143551e-58 | -8.615850e-47 |
| Msa0944550 | Msa1306430 | 0.811113 | 8.235814e-51 | -8.615850e-47 |
| Msa0944550 | Msa1306750 | 0.854190 | 1.451516e-61 | -8.615850e-47 |
| Msa0944550 | Msa1307740 | 0.884411 | 1.961665e-71 | -8.615850e-47 |
| Msa0944550 | Msa1308480 | 0.804773 | 1.839024e-49 | -8.615850e-47 |
| Msa0944550 | Msa1313050 | 0.811001 | 8.709132e-51 | -8.615850e-47 |
| Msa0944550 | Msa1314770 | 0.813061 | 3.096491e-51 | -8.615850e-47 |
| Msa0944550 | Msa1316560 | -0.814701 | 1.347284e-51 | -8.615850e-47 |
| Msa0944550 | Msa1322190 | 0.858693 | 6.914169e-63 | -8.615850e-47 |
| Msa0944550 | Msa1327550 | 0.822589 | 2.185036e-53 | -8.615850e-47 |
| Msa0944550 | Msa1328700 | 0.842787 | 2.088980e-58 | -8.615850e-47 |
| Msa0944550 | Msa1348600 | 0.818675 | 1.732226e-52 | -8.615850e-47 |
| Msa0944550 | Msa1369530 | 0.820779 | 5.726226e-53 | -8.615850e-47 |
| Msa0944550 | Msa1370340 | 0.813530 | 2.443285e-51 | -8.615850e-47 |
| Msa0944550 | Msa1371580 | 0.802971 | 4.355697e-49 | -8.615850e-47 |
| Msa0944550 | Msa1376760 | 0.823075 | 1.683389e-53 | -8.615850e-47 |
| Msa0944550 | Msa1378230 | 0.818121 | 2.312859e-52 | -8.615850e-47 |
| Msa0944550 | Msa1379710 | 0.807742 | 4.357133e-50 | -8.615850e-47 |
| Msa0944550 | Msa1382930 | 0.829012 | 6.531173e-55 | -8.615850e-47 |
| Msa0944550 | Msa1395440 | 0.830689 | 2.549825e-55 | -8.615850e-47 |
| Msa0944550 | Msa1397970 | 0.802933 | 4.434033e-49 | -8.615850e-47 |
| Msa0944550 | Msa1403340 | 0.809627 | 1.723529e-50 | -8.615850e-47 |
| Msa0944550 | Msa1419960 | 0.810168 | 1.318313e-50 | -8.615850e-47 |
| Msa0944550 | Msa1427230 | 0.823917 | 1.070119e-53 | -8.615850e-47 |
| Msa0944550 | Msa1427830 | 0.820168 | 7.910726e-53 | -8.615850e-47 |
| Msa0944550 | Msa1430680 | 0.809823 | 1.564171e-50 | -8.615850e-47 |
| Msa0944550 | Msa1434240 | 0.829124 | 6.133438e-55 | -8.615850e-47 |
| Msa0944550 | Msa1435370 | 0.832047 | 1.181007e-55 | -8.615850e-47 |
| Msa0944550 | Msa1437680 | 0.817558 | 3.097760e-52 | -8.615850e-47 |
| Msa0944550 | Msa1438910 | 0.818227 | 2.187896e-52 | -8.615850e-47 |
| Msa0944550 | Msa1440910 | 0.828225 | 1.012009e-54 | -8.615850e-47 |
| Msa0944550 | Msa1441190 | 0.802974 | 4.347974e-49 | -8.615850e-47 |
| Msa0944550 | Msa1444250 | -0.855173 | 7.537240e-62 | -8.615850e-47 |
| Msa0944550 | Msa1444740 | 0.836540 | 8.813930e-57 | -8.615850e-47 |
| Msa0944550 | Msa1451620 | -0.846677 | 1.868411e-59 | -8.615850e-47 |
| Msa0944550 | Msa1454110 | 0.800727 | 1.258083e-48 | -8.615850e-47 |
| Msa0944550 | Msa1454860 | 0.812124 | 4.963578e-51 | -8.615850e-47 |
| Msa0944550 | Msa1460830 | 0.823884 | 1.088831e-53 | -8.615850e-47 |
| Msa0944550 | Msa1464940 | 0.801315 | 9.539985e-49 | -8.615850e-47 |
| Msa0944550 | Msa1465960 | 0.809982 | 1.445793e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944550 | MtrunA17_Chr6g0461331 | 92.373 | 236 | 10 | 1 | 1 | 236 | 1 | 228 | 1.21e-153 | 426 |
| Msa0944550 | MtrunA17_Chr7g0253401 | 44.800 | 250 | 82 | 10 | 1 | 233 | 1 | 211 | 5.97e-55 | 175 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0944550 | AT3G03870.2 | 36.462 | 277 | 119 | 15 | 1 | 233 | 1 | 264 | 2.30e-30 | 114 |
| Msa0944550 | AT5G18130.1 | 41.040 | 173 | 64 | 7 | 91 | 233 | 114 | 278 | 6.15e-29 | 110 |
| Msa0944550 | AT3G03870.1 | 32.231 | 242 | 108 | 14 | 1 | 199 | 1 | 229 | 6.30e-14 | 69.3 |
| Msa0944550 | AT5G18130.2 | 34.752 | 141 | 55 | 6 | 91 | 202 | 114 | 246 | 7.17e-13 | 66.6 |
Find 54 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTCCAAGAGGGTGATTT+TGG | 0.133156 | 6_3:-21489127 | None:intergenic |
| GTTATGTGAGCTCTTGTTAT+TGG | 0.194388 | 6_3:-21490536 | None:intergenic |
| AAAGATGGAGATGGCTTTCT+AGG | 0.223368 | 6_3:-21489007 | None:intergenic |
| AAGATTAAGGAAAATGAAAT+TGG | 0.238321 | 6_3:+21489426 | Msa0944550:CDS |
| TCTTTCTCAATAATCATTCT+TGG | 0.258263 | 6_3:-21489504 | None:intergenic |
| AGTTGGAGTTTCAAAATATT+AGG | 0.269399 | 6_3:-21489051 | None:intergenic |
| GAAACATTTGGAGTATATAA+TGG | 0.276998 | 6_3:+21490612 | Msa0944550:three_prime_UTR |
| GTTGGTGCTATTTGCACTTT+TGG | 0.279828 | 6_3:+21489612 | Msa0944550:CDS |
| ATTATTGAGAAAGATGATTT+TGG | 0.285258 | 6_3:+21489513 | Msa0944550:CDS |
| TAACACTTCAAATGATGTTA+TGG | 0.353998 | 6_3:+21489335 | Msa0944550:CDS |
| CAGTACAAGGATGAGCAATA+AGG | 0.360813 | 6_3:-21490707 | None:intergenic |
| TTACCAAGTTTGAGGTCTAA+TGG | 0.382258 | 6_3:-21489315 | None:intergenic |
| TTTATTGAATTAATTAAAGA+TGG | 0.385433 | 6_3:-21489022 | None:intergenic |
| AAACATTTGGAGTATATAAT+GGG | 0.401708 | 6_3:+21490613 | Msa0944550:three_prime_UTR |
| AGAGAATTAGAGATTATATA+TGG | 0.405358 | 6_3:-21490738 | None:intergenic |
| GAAGCAATTTCTGTTGTAAG+AGG | 0.414220 | 6_3:+21490509 | Msa0944550:CDS |
| AAGTTCCTTCATGAAACATT+TGG | 0.421762 | 6_3:+21490600 | Msa0944550:three_prime_UTR |
| TTGAAGTGTTACCAAGTTTG+AGG | 0.426516 | 6_3:-21489323 | None:intergenic |
| GGTCTAATGGAATTTGTAAA+GGG | 0.426783 | 6_3:-21489302 | None:intergenic |
| ATATAATCTCTAATTCTCTA+TGG | 0.428639 | 6_3:+21490742 | Msa0944550:three_prime_UTR |
| TTATGGAAGTGGAGTCTTAG+TGG | 0.435150 | 6_3:+21489588 | Msa0944550:CDS |
| TCTTTACTACTACTTGACTT+TGG | 0.442062 | 6_3:-21489468 | None:intergenic |
| ATAAGTAAATAAATAAAAGT+TGG | 0.444781 | 6_3:-21489068 | None:intergenic |
| TGGGAAGAAGAGAATAATAG+TGG | 0.445840 | 6_3:+21489558 | Msa0944550:CDS |
| AAAATCCAAAATCACCCTCT+TGG | 0.447623 | 6_3:+21489122 | Msa0944550:five_prime_UTR |
| AGGTCTAATGGAATTTGTAA+AGG | 0.463571 | 6_3:-21489303 | None:intergenic |
| AGTACAAGGATGAGCAATAA+GGG | 0.464777 | 6_3:-21490706 | None:intergenic |
| TTCAGAAGGATCAGAAGAAT+AGG | 0.469303 | 6_3:+21489691 | Msa0944550:CDS |
| CAAAATCACCCTCTTGGAGA+TGG | 0.481333 | 6_3:+21489128 | Msa0944550:exon |
| CAAAGAAGATGATTCAAGTT+GGG | 0.482479 | 6_3:+21489539 | Msa0944550:CDS |
| TGGAGATGGATCTTGATGAA+TGG | 0.483700 | 6_3:+21489142 | Msa0944550:exon |
| GAATTTGTAAAGGGACAAGT+TGG | 0.486114 | 6_3:-21489293 | None:intergenic |
| ACAAAGAAGATGATTCAAGT+TGG | 0.487890 | 6_3:+21489538 | Msa0944550:CDS |
| GGAGATGGATCTTGATGAAT+GGG | 0.498676 | 6_3:+21489143 | Msa0944550:exon |
| ATTCCATTAGACCTCAAACT+TGG | 0.502699 | 6_3:+21489312 | Msa0944550:CDS |
| TATATTGATTTCAATGAAGA+TGG | 0.511704 | 6_3:+21489186 | Msa0944550:CDS |
| AAGCAATTTCTGTTGTAAGA+GGG | 0.518875 | 6_3:+21490510 | Msa0944550:CDS |
| GAATTAATTAAAGATGGAGA+TGG | 0.545724 | 6_3:-21489016 | None:intergenic |
| ATACTCCAAATGTTTCATGA+AGG | 0.553038 | 6_3:-21490605 | None:intergenic |
| AGAGCTCACATAACAGTTGG+TGG | 0.559551 | 6_3:+21490545 | Msa0944550:CDS |
| AGCAATTTCTGTTGTAAGAG+GGG | 0.561387 | 6_3:+21490511 | Msa0944550:CDS |
| ATTTCAGAGGATTAAGCAAG+TGG | 0.575069 | 6_3:+21490463 | Msa0944550:intron |
| AAGTGGAGTCTTAGTGGTGT+TGG | 0.575334 | 6_3:+21489594 | Msa0944550:CDS |
| ACAAGAGCTCACATAACAGT+TGG | 0.586253 | 6_3:+21490542 | Msa0944550:CDS |
| TGGGAATCAATCTCTAGTGA+TGG | 0.593054 | 6_3:+21489162 | Msa0944550:CDS |
| GAGTTTCAAAATATTAGGTG+AGG | 0.595658 | 6_3:-21489046 | None:intergenic |
| ATCAGAAAGTGCTTTAGACA+TGG | 0.600275 | 6_3:+21489236 | Msa0944550:CDS |
| TGTTCTTTGGAAGCCAACAA+AGG | 0.602238 | 6_3:+21489661 | Msa0944550:CDS |
| ATCAAGATCCATCTCCAAGA+GGG | 0.609806 | 6_3:-21489136 | None:intergenic |
| TATGGTATATATACAGTACA+AGG | 0.627341 | 6_3:-21490720 | None:intergenic |
| TCAAATATATGCTGATGACA+AGG | 0.643734 | 6_3:+21489716 | Msa0944550:CDS |
| AATTATGTCACAAACTATAG+CGG | 0.644307 | 6_3:+21490772 | Msa0944550:three_prime_UTR |
| GAGTATATAATGGGAAACAG+TGG | 0.673484 | 6_3:+21490622 | Msa0944550:three_prime_UTR |
| CATCAAGATCCATCTCCAAG+AGG | 0.699790 | 6_3:-21489137 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTGAATTAATTAAAGA+TGG | - | chr6_3:21489025-21489044 | None:intergenic | 10.0% |
| !! | ATAAGTAAATAAATAAAAGT+TGG | - | chr6_3:21489071-21489090 | None:intergenic | 10.0% |
| !!! | CAAATCATATATTTATTTTT+TGG | + | chr6_3:21489759-21489778 | Msa0944550:intron | 10.0% |
| !!! | AATTTTTTTGATTAATAGTA+CGG | + | chr6_3:21489796-21489815 | Msa0944550:intron | 10.0% |
| !! | TTTATTGAATTAATTAAAGA+TGG | - | chr6_3:21489025-21489044 | None:intergenic | 10.0% |
| !! | ATAAGTAAATAAATAAAAGT+TGG | - | chr6_3:21489071-21489090 | None:intergenic | 10.0% |
| !!! | CAAATCATATATTTATTTTT+TGG | + | chr6_3:21489759-21489778 | Msa0944550:intron | 10.0% |
| !!! | AATTTTTTTGATTAATAGTA+CGG | + | chr6_3:21489796-21489815 | Msa0944550:intron | 10.0% |
| !!! | TTTTTGATTAGTATAGTAAA+TGG | - | chr6_3:21489106-21489125 | None:intergenic | 15.0% |
| !!! | ATAATAGTGGTTTTAATTTA+TGG | + | chr6_3:21489571-21489590 | Msa0944550:CDS | 15.0% |
| !! | TAAATCATTTATACTAAATC+AGG | - | chr6_3:21489864-21489883 | None:intergenic | 15.0% |
| !!! | TTTCTTATTTTCAAGTATAT+TGG | - | chr6_3:21489957-21489976 | None:intergenic | 15.0% |
| !!! | TTTTTGATTAGTATAGTAAA+TGG | - | chr6_3:21489106-21489125 | None:intergenic | 15.0% |
| !!! | ATAATAGTGGTTTTAATTTA+TGG | + | chr6_3:21489571-21489590 | Msa0944550:CDS | 15.0% |
| !! | TAAATCATTTATACTAAATC+AGG | - | chr6_3:21489864-21489883 | None:intergenic | 15.0% |
| !!! | TTTCTTATTTTCAAGTATAT+TGG | - | chr6_3:21489957-21489976 | None:intergenic | 15.0% |
| !!! | TATATTGATTTCAATGAAGA+TGG | + | chr6_3:21489186-21489205 | Msa0944550:CDS | 20.0% |
| !!! | ACAAGTTTTCTTTAAGATTA+AGG | + | chr6_3:21489413-21489432 | Msa0944550:CDS | 20.0% |
| !! | AAGATTAAGGAAAATGAAAT+TGG | + | chr6_3:21489426-21489445 | Msa0944550:CDS | 20.0% |
| !!! | ATTATTGAGAAAGATGATTT+TGG | + | chr6_3:21489513-21489532 | Msa0944550:CDS | 20.0% |
| !!! | TTTTAGTCATTATGTTGTTA+AGG | + | chr6_3:21490010-21490029 | Msa0944550:intron | 20.0% |
| !!! | ATTGATTCGTAGAAAAAATA+TGG | - | chr6_3:21490281-21490300 | None:intergenic | 20.0% |
| !!! | AAACATTTGGAGTATATAAT+GGG | + | chr6_3:21490613-21490632 | Msa0944550:three_prime_UTR | 20.0% |
| !! | AGAGAATTAGAGATTATATA+TGG | - | chr6_3:21490741-21490760 | None:intergenic | 20.0% |
| !! | ATATAATCTCTAATTCTCTA+TGG | + | chr6_3:21490742-21490761 | Msa0944550:three_prime_UTR | 20.0% |
| !!! | TATATTGATTTCAATGAAGA+TGG | + | chr6_3:21489186-21489205 | Msa0944550:CDS | 20.0% |
| !!! | ACAAGTTTTCTTTAAGATTA+AGG | + | chr6_3:21489413-21489432 | Msa0944550:CDS | 20.0% |
| !! | AAGATTAAGGAAAATGAAAT+TGG | + | chr6_3:21489426-21489445 | Msa0944550:CDS | 20.0% |
| !!! | ATTATTGAGAAAGATGATTT+TGG | + | chr6_3:21489513-21489532 | Msa0944550:CDS | 20.0% |
| !!! | TTTTAGTCATTATGTTGTTA+AGG | + | chr6_3:21490010-21490029 | Msa0944550:intron | 20.0% |
| !!! | ATTGATTCGTAGAAAAAATA+TGG | - | chr6_3:21490281-21490300 | None:intergenic | 20.0% |
| !!! | AAACATTTGGAGTATATAAT+GGG | + | chr6_3:21490613-21490632 | Msa0944550:three_prime_UTR | 20.0% |
| !! | AGAGAATTAGAGATTATATA+TGG | - | chr6_3:21490741-21490760 | None:intergenic | 20.0% |
| !! | ATATAATCTCTAATTCTCTA+TGG | + | chr6_3:21490742-21490761 | Msa0944550:three_prime_UTR | 20.0% |
| ! | GAATTAATTAAAGATGGAGA+TGG | - | chr6_3:21489019-21489038 | None:intergenic | 25.0% |
| ! | AGTTGGAGTTTCAAAATATT+AGG | - | chr6_3:21489054-21489073 | None:intergenic | 25.0% |
| ! | AAAAAAAGTTTCCTAGGAAA+AGG | + | chr6_3:21489213-21489232 | Msa0944550:CDS | 25.0% |
| ! | TAACACTTCAAATGATGTTA+TGG | + | chr6_3:21489335-21489354 | Msa0944550:CDS | 25.0% |
| ! | TCTTTCTCAATAATCATTCT+TGG | - | chr6_3:21489507-21489526 | None:intergenic | 25.0% |
| !!! | TCTATTTGTGTTTTGTTCTT+TGG | + | chr6_3:21489648-21489667 | Msa0944550:CDS | 25.0% |
| ! | TTATACTAAATCAGGTTCTT+CGG | - | chr6_3:21489856-21489875 | None:intergenic | 25.0% |
| ! | TTTAGTATAGAATTGTGTCA+AGG | + | chr6_3:21489905-21489924 | Msa0944550:intron | 25.0% |
| ! | CTTTATAGTTGAAGAAATTG+TGG | + | chr6_3:21490093-21490112 | Msa0944550:intron | 25.0% |
| !!! | AGTTAACACTTTTTTCTCTA+TGG | - | chr6_3:21490381-21490400 | None:intergenic | 25.0% |
| !!! | AGAAAAAAGTGTTAACTTTG+AGG | + | chr6_3:21490384-21490403 | Msa0944550:intron | 25.0% |
| ! | TCATAATCTATTGAAGATTC+TGG | - | chr6_3:21490410-21490429 | None:intergenic | 25.0% |
| ! | TTTATAATAACTCTAACCCT+TGG | + | chr6_3:21490435-21490454 | Msa0944550:intron | 25.0% |
| !! | GAAACATTTGGAGTATATAA+TGG | + | chr6_3:21490612-21490631 | Msa0944550:three_prime_UTR | 25.0% |
| ! | TATGGTATATATACAGTACA+AGG | - | chr6_3:21490723-21490742 | None:intergenic | 25.0% |
| ! | AATTATGTCACAAACTATAG+CGG | + | chr6_3:21490772-21490791 | Msa0944550:three_prime_UTR | 25.0% |
| !! | GCGGATTTTACATTATTATT+TGG | + | chr6_3:21490791-21490810 | Msa0944550:three_prime_UTR | 25.0% |
| ! | GAATTAATTAAAGATGGAGA+TGG | - | chr6_3:21489019-21489038 | None:intergenic | 25.0% |
| ! | AGTTGGAGTTTCAAAATATT+AGG | - | chr6_3:21489054-21489073 | None:intergenic | 25.0% |
| ! | AAAAAAAGTTTCCTAGGAAA+AGG | + | chr6_3:21489213-21489232 | Msa0944550:CDS | 25.0% |
| ! | TAACACTTCAAATGATGTTA+TGG | + | chr6_3:21489335-21489354 | Msa0944550:CDS | 25.0% |
| ! | TCTTTCTCAATAATCATTCT+TGG | - | chr6_3:21489507-21489526 | None:intergenic | 25.0% |
| !!! | TCTATTTGTGTTTTGTTCTT+TGG | + | chr6_3:21489648-21489667 | Msa0944550:CDS | 25.0% |
| ! | TTATACTAAATCAGGTTCTT+CGG | - | chr6_3:21489856-21489875 | None:intergenic | 25.0% |
| ! | TTTAGTATAGAATTGTGTCA+AGG | + | chr6_3:21489905-21489924 | Msa0944550:intron | 25.0% |
| ! | CTTTATAGTTGAAGAAATTG+TGG | + | chr6_3:21490093-21490112 | Msa0944550:intron | 25.0% |
| !!! | AGTTAACACTTTTTTCTCTA+TGG | - | chr6_3:21490381-21490400 | None:intergenic | 25.0% |
| !!! | AGAAAAAAGTGTTAACTTTG+AGG | + | chr6_3:21490384-21490403 | Msa0944550:intron | 25.0% |
| ! | TCATAATCTATTGAAGATTC+TGG | - | chr6_3:21490410-21490429 | None:intergenic | 25.0% |
| ! | TTTATAATAACTCTAACCCT+TGG | + | chr6_3:21490435-21490454 | Msa0944550:intron | 25.0% |
| !! | GAAACATTTGGAGTATATAA+TGG | + | chr6_3:21490612-21490631 | Msa0944550:three_prime_UTR | 25.0% |
| ! | TATGGTATATATACAGTACA+AGG | - | chr6_3:21490723-21490742 | None:intergenic | 25.0% |
| ! | AATTATGTCACAAACTATAG+CGG | + | chr6_3:21490772-21490791 | Msa0944550:three_prime_UTR | 25.0% |
| !! | GCGGATTTTACATTATTATT+TGG | + | chr6_3:21490791-21490810 | Msa0944550:three_prime_UTR | 25.0% |
| GAGTTTCAAAATATTAGGTG+AGG | - | chr6_3:21489049-21489068 | None:intergenic | 30.0% | |
| !!! | ACAAGTTGGTTTTGTTTTCT+TGG | - | chr6_3:21489282-21489301 | None:intergenic | 30.0% |
| GGTCTAATGGAATTTGTAAA+GGG | - | chr6_3:21489305-21489324 | None:intergenic | 30.0% | |
| AGGTCTAATGGAATTTGTAA+AGG | - | chr6_3:21489306-21489325 | None:intergenic | 30.0% | |
| TCTTTACTACTACTTGACTT+TGG | - | chr6_3:21489471-21489490 | None:intergenic | 30.0% | |
| ACAAAGAAGATGATTCAAGT+TGG | + | chr6_3:21489538-21489557 | Msa0944550:CDS | 30.0% | |
| ! | CAAAGAAGATGATTCAAGTT+GGG | + | chr6_3:21489539-21489558 | Msa0944550:CDS | 30.0% |
| !!! | GTGGTTTTAATTTATGGAAG+TGG | + | chr6_3:21489577-21489596 | Msa0944550:CDS | 30.0% |
| !!! | TCTGAAGTTTTTTCCTTTGT+TGG | - | chr6_3:21489677-21489696 | None:intergenic | 30.0% |
| ACAAAGGAAAAAACTTCAGA+AGG | + | chr6_3:21489677-21489696 | Msa0944550:CDS | 30.0% | |
| TCAAATATATGCTGATGACA+AGG | + | chr6_3:21489716-21489735 | Msa0944550:CDS | 30.0% | |
| GACAAGGTTAGTAAATTTCT+TGG | + | chr6_3:21489732-21489751 | Msa0944550:intron | 30.0% | |
| TTGTTAAGGCTGTAATTACA+TGG | + | chr6_3:21490024-21490043 | Msa0944550:intron | 30.0% | |
| ! | CTGTAATTACATGGTAGTTT+TGG | + | chr6_3:21490033-21490052 | Msa0944550:intron | 30.0% |
| AATTGTGGAACTACAATCAA+CGG | + | chr6_3:21490108-21490127 | Msa0944550:intron | 30.0% | |
| TTCTACGAATCAATACGATA+AGG | + | chr6_3:21490287-21490306 | Msa0944550:intron | 30.0% | |
| TCTACGAATCAATACGATAA+GGG | + | chr6_3:21490288-21490307 | Msa0944550:intron | 30.0% | |
| AAGCAATTTCTGTTGTAAGA+GGG | + | chr6_3:21490510-21490529 | Msa0944550:CDS | 30.0% | |
| AAGTTCCTTCATGAAACATT+TGG | + | chr6_3:21490600-21490619 | Msa0944550:three_prime_UTR | 30.0% | |
| ATACTCCAAATGTTTCATGA+AGG | - | chr6_3:21490608-21490627 | None:intergenic | 30.0% | |
| GAGTTTCAAAATATTAGGTG+AGG | - | chr6_3:21489049-21489068 | None:intergenic | 30.0% | |
| !!! | ACAAGTTGGTTTTGTTTTCT+TGG | - | chr6_3:21489282-21489301 | None:intergenic | 30.0% |
| GGTCTAATGGAATTTGTAAA+GGG | - | chr6_3:21489305-21489324 | None:intergenic | 30.0% | |
| AGGTCTAATGGAATTTGTAA+AGG | - | chr6_3:21489306-21489325 | None:intergenic | 30.0% | |
| TCTTTACTACTACTTGACTT+TGG | - | chr6_3:21489471-21489490 | None:intergenic | 30.0% | |
| ACAAAGAAGATGATTCAAGT+TGG | + | chr6_3:21489538-21489557 | Msa0944550:CDS | 30.0% | |
| ! | CAAAGAAGATGATTCAAGTT+GGG | + | chr6_3:21489539-21489558 | Msa0944550:CDS | 30.0% |
| !!! | GTGGTTTTAATTTATGGAAG+TGG | + | chr6_3:21489577-21489596 | Msa0944550:CDS | 30.0% |
| !!! | TCTGAAGTTTTTTCCTTTGT+TGG | - | chr6_3:21489677-21489696 | None:intergenic | 30.0% |
| ACAAAGGAAAAAACTTCAGA+AGG | + | chr6_3:21489677-21489696 | Msa0944550:CDS | 30.0% | |
| TCAAATATATGCTGATGACA+AGG | + | chr6_3:21489716-21489735 | Msa0944550:CDS | 30.0% | |
| GACAAGGTTAGTAAATTTCT+TGG | + | chr6_3:21489732-21489751 | Msa0944550:intron | 30.0% | |
| TTGTTAAGGCTGTAATTACA+TGG | + | chr6_3:21490024-21490043 | Msa0944550:intron | 30.0% | |
| ! | CTGTAATTACATGGTAGTTT+TGG | + | chr6_3:21490033-21490052 | Msa0944550:intron | 30.0% |
| AATTGTGGAACTACAATCAA+CGG | + | chr6_3:21490108-21490127 | Msa0944550:intron | 30.0% | |
| TTCTACGAATCAATACGATA+AGG | + | chr6_3:21490287-21490306 | Msa0944550:intron | 30.0% | |
| TCTACGAATCAATACGATAA+GGG | + | chr6_3:21490288-21490307 | Msa0944550:intron | 30.0% | |
| AAGCAATTTCTGTTGTAAGA+GGG | + | chr6_3:21490510-21490529 | Msa0944550:CDS | 30.0% | |
| AAGTTCCTTCATGAAACATT+TGG | + | chr6_3:21490600-21490619 | Msa0944550:three_prime_UTR | 30.0% | |
| ATACTCCAAATGTTTCATGA+AGG | - | chr6_3:21490608-21490627 | None:intergenic | 30.0% | |
| AAAATCCAAAATCACCCTCT+TGG | + | chr6_3:21489122-21489141 | Msa0944550:five_prime_UTR | 35.0% | |
| GGTGAGAAAAAAAGTTTCCT+AGG | + | chr6_3:21489207-21489226 | Msa0944550:CDS | 35.0% | |
| !! | ATCAGAAAGTGCTTTAGACA+TGG | + | chr6_3:21489236-21489255 | Msa0944550:CDS | 35.0% |
| !!! | TTTTGTTTTCTTGGTGGTGA+AGG | - | chr6_3:21489273-21489292 | None:intergenic | 35.0% |
| !!! | AGTTGGTTTTGTTTTCTTGG+TGG | - | chr6_3:21489279-21489298 | None:intergenic | 35.0% |
| GAATTTGTAAAGGGACAAGT+TGG | - | chr6_3:21489296-21489315 | None:intergenic | 35.0% | |
| ATTCCATTAGACCTCAAACT+TGG | + | chr6_3:21489312-21489331 | Msa0944550:CDS | 35.0% | |
| ! | TTACCAAGTTTGAGGTCTAA+TGG | - | chr6_3:21489318-21489337 | None:intergenic | 35.0% |
| ! | TTGAAGTGTTACCAAGTTTG+AGG | - | chr6_3:21489326-21489345 | None:intergenic | 35.0% |
| ! | CTTGTGACACATTTTCTTCT+TGG | - | chr6_3:21489398-21489417 | None:intergenic | 35.0% |
| TGGGAAGAAGAGAATAATAG+TGG | + | chr6_3:21489558-21489577 | Msa0944550:CDS | 35.0% | |
| TTCAGAAGGATCAGAAGAAT+AGG | + | chr6_3:21489691-21489710 | Msa0944550:CDS | 35.0% | |
| TTTGGAGACTCATGAAATCT+TGG | + | chr6_3:21490051-21490070 | Msa0944550:intron | 35.0% | |
| ATTGTGGAACTACAATCAAC+GGG | + | chr6_3:21490109-21490128 | Msa0944550:intron | 35.0% | |
| GATAAGGGACTGAATATAAG+TGG | + | chr6_3:21490303-21490322 | Msa0944550:intron | 35.0% | |
| !! | TCCTCTGAAATCAAAACCAA+GGG | - | chr6_3:21490454-21490473 | None:intergenic | 35.0% |
| !! | ATCCTCTGAAATCAAAACCA+AGG | - | chr6_3:21490455-21490474 | None:intergenic | 35.0% |
| ATTTCAGAGGATTAAGCAAG+TGG | + | chr6_3:21490463-21490482 | Msa0944550:intron | 35.0% | |
| GAAGCAATTTCTGTTGTAAG+AGG | + | chr6_3:21490509-21490528 | Msa0944550:CDS | 35.0% | |
| AGCAATTTCTGTTGTAAGAG+GGG | + | chr6_3:21490511-21490530 | Msa0944550:CDS | 35.0% | |
| ! | GTTATGTGAGCTCTTGTTAT+TGG | - | chr6_3:21490539-21490558 | None:intergenic | 35.0% |
| ! | GAGTATATAATGGGAAACAG+TGG | + | chr6_3:21490622-21490641 | Msa0944550:three_prime_UTR | 35.0% |
| AGTACAAGGATGAGCAATAA+GGG | - | chr6_3:21490709-21490728 | None:intergenic | 35.0% | |
| AAAATCCAAAATCACCCTCT+TGG | + | chr6_3:21489122-21489141 | Msa0944550:five_prime_UTR | 35.0% | |
| GGTGAGAAAAAAAGTTTCCT+AGG | + | chr6_3:21489207-21489226 | Msa0944550:CDS | 35.0% | |
| !! | ATCAGAAAGTGCTTTAGACA+TGG | + | chr6_3:21489236-21489255 | Msa0944550:CDS | 35.0% |
| !!! | TTTTGTTTTCTTGGTGGTGA+AGG | - | chr6_3:21489273-21489292 | None:intergenic | 35.0% |
| !!! | AGTTGGTTTTGTTTTCTTGG+TGG | - | chr6_3:21489279-21489298 | None:intergenic | 35.0% |
| GAATTTGTAAAGGGACAAGT+TGG | - | chr6_3:21489296-21489315 | None:intergenic | 35.0% | |
| ATTCCATTAGACCTCAAACT+TGG | + | chr6_3:21489312-21489331 | Msa0944550:CDS | 35.0% | |
| ! | TTACCAAGTTTGAGGTCTAA+TGG | - | chr6_3:21489318-21489337 | None:intergenic | 35.0% |
| ! | TTGAAGTGTTACCAAGTTTG+AGG | - | chr6_3:21489326-21489345 | None:intergenic | 35.0% |
| ! | CTTGTGACACATTTTCTTCT+TGG | - | chr6_3:21489398-21489417 | None:intergenic | 35.0% |
| TGGGAAGAAGAGAATAATAG+TGG | + | chr6_3:21489558-21489577 | Msa0944550:CDS | 35.0% | |
| TTCAGAAGGATCAGAAGAAT+AGG | + | chr6_3:21489691-21489710 | Msa0944550:CDS | 35.0% | |
| TTTGGAGACTCATGAAATCT+TGG | + | chr6_3:21490051-21490070 | Msa0944550:intron | 35.0% | |
| ATTGTGGAACTACAATCAAC+GGG | + | chr6_3:21490109-21490128 | Msa0944550:intron | 35.0% | |
| GATAAGGGACTGAATATAAG+TGG | + | chr6_3:21490303-21490322 | Msa0944550:intron | 35.0% | |
| !! | TCCTCTGAAATCAAAACCAA+GGG | - | chr6_3:21490454-21490473 | None:intergenic | 35.0% |
| !! | ATCCTCTGAAATCAAAACCA+AGG | - | chr6_3:21490455-21490474 | None:intergenic | 35.0% |
| ATTTCAGAGGATTAAGCAAG+TGG | + | chr6_3:21490463-21490482 | Msa0944550:intron | 35.0% | |
| GAAGCAATTTCTGTTGTAAG+AGG | + | chr6_3:21490509-21490528 | Msa0944550:CDS | 35.0% | |
| AGCAATTTCTGTTGTAAGAG+GGG | + | chr6_3:21490511-21490530 | Msa0944550:CDS | 35.0% | |
| ! | GTTATGTGAGCTCTTGTTAT+TGG | - | chr6_3:21490539-21490558 | None:intergenic | 35.0% |
| ! | GAGTATATAATGGGAAACAG+TGG | + | chr6_3:21490622-21490641 | Msa0944550:three_prime_UTR | 35.0% |
| AGTACAAGGATGAGCAATAA+GGG | - | chr6_3:21490709-21490728 | None:intergenic | 35.0% | |
| AAAGATGGAGATGGCTTTCT+AGG | - | chr6_3:21489010-21489029 | None:intergenic | 40.0% | |
| ATCAAGATCCATCTCCAAGA+GGG | - | chr6_3:21489139-21489158 | None:intergenic | 40.0% | |
| TGGAGATGGATCTTGATGAA+TGG | + | chr6_3:21489142-21489161 | Msa0944550:exon | 40.0% | |
| GGAGATGGATCTTGATGAAT+GGG | + | chr6_3:21489143-21489162 | Msa0944550:exon | 40.0% | |
| TGGGAATCAATCTCTAGTGA+TGG | + | chr6_3:21489162-21489181 | Msa0944550:CDS | 40.0% | |
| ! | CACTTTCTGATCCTTTTCCT+AGG | - | chr6_3:21489227-21489246 | None:intergenic | 40.0% |
| TTATGGAAGTGGAGTCTTAG+TGG | + | chr6_3:21489588-21489607 | Msa0944550:CDS | 40.0% | |
| !!! | GTTGGTGCTATTTGCACTTT+TGG | + | chr6_3:21489612-21489631 | Msa0944550:CDS | 40.0% |
| ! | TGTTCTTTGGAAGCCAACAA+AGG | + | chr6_3:21489661-21489680 | Msa0944550:CDS | 40.0% |
| GACTGAATATAAGTGGATCG+TGG | + | chr6_3:21490310-21490329 | Msa0944550:intron | 40.0% | |
| !!! | ACCCTTGGTTTTGATTTCAG+AGG | + | chr6_3:21490450-21490469 | Msa0944550:intron | 40.0% |
| ACAAGAGCTCACATAACAGT+TGG | + | chr6_3:21490542-21490561 | Msa0944550:CDS | 40.0% | |
| CAGTACAAGGATGAGCAATA+AGG | - | chr6_3:21490710-21490729 | None:intergenic | 40.0% | |
| AAAGATGGAGATGGCTTTCT+AGG | - | chr6_3:21489010-21489029 | None:intergenic | 40.0% | |
| ATCAAGATCCATCTCCAAGA+GGG | - | chr6_3:21489139-21489158 | None:intergenic | 40.0% | |
| TGGAGATGGATCTTGATGAA+TGG | + | chr6_3:21489142-21489161 | Msa0944550:exon | 40.0% | |
| GGAGATGGATCTTGATGAAT+GGG | + | chr6_3:21489143-21489162 | Msa0944550:exon | 40.0% | |
| TGGGAATCAATCTCTAGTGA+TGG | + | chr6_3:21489162-21489181 | Msa0944550:CDS | 40.0% | |
| ! | CACTTTCTGATCCTTTTCCT+AGG | - | chr6_3:21489227-21489246 | None:intergenic | 40.0% |
| TTATGGAAGTGGAGTCTTAG+TGG | + | chr6_3:21489588-21489607 | Msa0944550:CDS | 40.0% | |
| !!! | GTTGGTGCTATTTGCACTTT+TGG | + | chr6_3:21489612-21489631 | Msa0944550:CDS | 40.0% |
| ! | TGTTCTTTGGAAGCCAACAA+AGG | + | chr6_3:21489661-21489680 | Msa0944550:CDS | 40.0% |
| GACTGAATATAAGTGGATCG+TGG | + | chr6_3:21490310-21490329 | Msa0944550:intron | 40.0% | |
| !!! | ACCCTTGGTTTTGATTTCAG+AGG | + | chr6_3:21490450-21490469 | Msa0944550:intron | 40.0% |
| ACAAGAGCTCACATAACAGT+TGG | + | chr6_3:21490542-21490561 | Msa0944550:CDS | 40.0% | |
| CAGTACAAGGATGAGCAATA+AGG | - | chr6_3:21490710-21490729 | None:intergenic | 40.0% | |
| ! | CATCTCCAAGAGGGTGATTT+TGG | - | chr6_3:21489130-21489149 | None:intergenic | 45.0% |
| CAAAATCACCCTCTTGGAGA+TGG | + | chr6_3:21489128-21489147 | Msa0944550:exon | 45.0% | |
| CATCAAGATCCATCTCCAAG+AGG | - | chr6_3:21489140-21489159 | None:intergenic | 45.0% | |
| AAGTGGAGTCTTAGTGGTGT+TGG | + | chr6_3:21489594-21489613 | Msa0944550:CDS | 45.0% | |
| AGAGCTCACATAACAGTTGG+TGG | + | chr6_3:21490545-21490564 | Msa0944550:CDS | 45.0% | |
| ! | CATCTCCAAGAGGGTGATTT+TGG | - | chr6_3:21489130-21489149 | None:intergenic | 45.0% |
| CAAAATCACCCTCTTGGAGA+TGG | + | chr6_3:21489128-21489147 | Msa0944550:exon | 45.0% | |
| CATCAAGATCCATCTCCAAG+AGG | - | chr6_3:21489140-21489159 | None:intergenic | 45.0% | |
| AAGTGGAGTCTTAGTGGTGT+TGG | + | chr6_3:21489594-21489613 | Msa0944550:CDS | 45.0% | |
| AGAGCTCACATAACAGTTGG+TGG | + | chr6_3:21490545-21490564 | Msa0944550:CDS | 45.0% | |
| !! | TAAATTATAGAAAATTATAT+TGG | + | chr6_3:21489882-21489901 | Msa0944550:intron | 5.0% |
| !! | TAAATTATAGAAAATTATAT+TGG | + | chr6_3:21489882-21489901 | Msa0944550:intron | 5.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 21488979 | 21490824 | 21488979 | ID=Msa0944550;Name=Msa0944550 |
| chr6_3 | mRNA | 21488979 | 21490824 | 21488979 | ID=Msa0944550-mRNA-1;Parent=Msa0944550;Name=Msa0944550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=168|1|1|1|1|1|2|235|236 |
| chr6_3 | exon | 21488979 | 21489737 | 21488979 | ID=Msa0944550-mRNA-1:exon:6408;Parent=Msa0944550-mRNA-1 |
| chr6_3 | exon | 21490470 | 21490824 | 21490470 | ID=Msa0944550-mRNA-1:exon:6409;Parent=Msa0944550-mRNA-1 |
| chr6_3 | five_prime_UTR | 21488979 | 21489146 | 21488979 | ID=Msa0944550-mRNA-1:five_prime_utr;Parent=Msa0944550-mRNA-1 |
| chr6_3 | CDS | 21489147 | 21489737 | 21489147 | ID=Msa0944550-mRNA-1:cds;Parent=Msa0944550-mRNA-1 |
| chr6_3 | CDS | 21490470 | 21490589 | 21490470 | ID=Msa0944550-mRNA-1:cds;Parent=Msa0944550-mRNA-1 |
| chr6_3 | three_prime_UTR | 21490590 | 21490824 | 21490590 | ID=Msa0944550-mRNA-1:three_prime_utr;Parent=Msa0944550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
