AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1024740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024740 MtrunA17_Chr7g0242701 98.595 427 6 0 1 427 1 427 0.0 874
Msa1024740 MtrunA17_Chr4g0006991 77.986 427 94 0 1 427 1 427 0.0 701
Msa1024740 MtrunA17_Chr8g0360521 45.278 413 206 5 16 427 16 409 3.17e-129 379
Msa1024740 MtrunA17_Chr5g0437601 42.019 426 235 6 3 427 10 424 1.59e-128 377
Msa1024740 MtrunA17_Chr3g0113671 47.688 346 179 2 84 427 104 449 2.42e-125 370
Msa1024740 MtrunA17_Chr3g0114101 40.000 425 254 1 3 427 7 430 2.32e-119 354
Msa1024740 MtrunA17_Chr5g0437291 46.418 349 182 3 84 427 163 511 5.51e-119 356
Msa1024740 MtrunA17_Chr4g0005481 46.532 346 180 4 83 427 105 446 4.48e-111 333
Msa1024740 MtrunA17_Chr4g0005491 45.559 349 182 5 85 427 61 407 4.95e-110 330
Msa1024740 MtrunA17_Chr7g0243301 43.343 353 192 5 81 427 59 409 8.40e-108 324
Msa1024740 MtrunA17_Chr1g0210771 40.634 347 182 8 84 427 57 382 1.77e-89 276
Msa1024740 MtrunA17_Chr1g0171171 39.655 348 185 8 83 427 50 375 5.01e-86 267
Msa1024740 MtrunA17_Chr3g0105301 38.150 346 198 6 86 427 43 376 3.39e-85 265
Msa1024740 MtrunA17_Chr5g0430371 37.883 359 197 10 82 427 54 399 7.19e-82 257
Msa1024740 MtrunA17_Chr3g0097891 36.599 347 198 6 81 427 26 350 1.72e-81 254
Msa1024740 MtrunA17_Chr5g0413271 37.197 371 211 10 64 427 121 476 3.70e-78 250
Msa1024740 MtrunA17_Chr7g0269991 36.390 349 197 9 86 427 137 467 1.80e-75 243
Msa1024740 MtrunA17_Chr4g0041011 36.550 342 192 7 86 427 47 363 3.60e-75 239
Msa1024740 MtrunA17_Chr7g0258851 36.752 351 204 8 85 427 247 587 1.26e-74 244
Msa1024740 MtrunA17_Chr1g0175671 37.322 351 202 9 85 427 169 509 3.40e-74 241
Msa1024740 MtrunA17_Chr4g0071391 35.613 351 208 7 84 427 107 446 4.38e-74 239
Msa1024740 MtrunA17_Chr5g0413851 38.304 342 187 9 86 427 42 359 3.58e-73 233
Msa1024740 MtrunA17_Chr2g0314801 36.127 346 198 7 83 427 30 353 4.37e-73 233
Msa1024740 MtrunA17_Chr2g0325481 35.652 345 197 8 83 427 47 366 6.06e-73 233
Msa1024740 MtrunA17_Chr4g0045941 35.362 345 199 7 83 427 30 350 1.52e-72 231
Msa1024740 MtrunA17_Chr4g0068111 33.242 364 224 6 71 427 102 453 8.23e-72 233
Msa1024740 MtrunA17_Chr1g0213281 32.187 407 241 11 32 427 133 515 1.85e-71 234
Msa1024740 MtrunA17_Chr2g0287901 37.534 365 195 10 79 427 90 437 3.42e-71 231
Msa1024740 MtrunA17_Chr4g0045951 35.965 342 195 7 86 427 45 362 3.45e-71 228
Msa1024740 MtrunA17_Chr2g0283581 35.072 345 199 8 83 427 39 358 6.57e-71 228
Msa1024740 MtrunA17_Chr3g0085071 35.429 350 194 10 82 427 42 363 5.55e-70 225
Msa1024740 MtrunA17_Chr3g0085081 34.857 350 196 10 82 427 27 348 6.24e-70 224
Msa1024740 MtrunA17_Chr2g0314791 35.714 350 188 9 84 427 27 345 3.75e-69 223
Msa1024740 MtrunA17_Chr3g0091031 34.286 350 198 10 82 427 27 348 1.80e-68 221
Msa1024740 MtrunA17_Chr8g0368461 35.165 364 205 9 84 427 176 528 2.26e-67 223
Msa1024740 MtrunA17_Chr3g0126021 31.066 441 257 12 6 427 47 459 6.59e-66 218
Msa1024740 MtrunA17_Chr7g0259711 32.033 359 216 8 83 427 88 432 6.03e-63 209
Msa1024740 MtrunA17_Chr8g0384151 31.909 351 210 6 84 427 88 416 1.47e-62 208
Msa1024740 MtrunA17_Chr1g0209921 37.553 237 136 6 83 317 41 267 5.11e-50 170
Msa1024740 MtrunA17_Chr1g0178081 29.812 426 180 16 25 427 12 341 5.10e-48 167
Msa1024740 MtrunA17_Chr8g0391481 30.685 365 215 14 84 427 25 372 1.65e-42 154
Msa1024740 MtrunA17_Chr5g0414091 31.117 376 207 15 81 427 79 431 4.75e-42 154
Msa1024740 MtrunA17_Chr5g0414051 28.906 384 215 15 75 427 64 420 4.84e-40 148
Msa1024740 MtrunA17_Chr5g0414061 30.447 358 222 13 85 427 93 438 7.05e-40 148
Msa1024740 MtrunA17_Chr7g0226991 28.676 408 237 17 53 427 16 402 9.67e-39 144
Msa1024740 MtrunA17_Chr8g0347321 26.744 430 269 14 28 427 26 439 5.06e-38 143
Msa1024740 MtrunA17_Chr8g0387921 25.293 427 278 12 20 427 15 419 7.90e-38 142
Msa1024740 MtrunA17_Chr3g0140371 29.891 368 207 14 86 427 18 360 8.69e-38 140
Msa1024740 MtrunA17_Chr6g0456691 28.738 428 255 16 20 427 22 419 2.45e-37 140
Msa1024740 MtrunA17_Chr5g0414041 30.939 362 225 14 81 427 82 433 4.28e-36 137
Msa1024740 MtrunA17_Chr6g0456681 30.194 361 223 12 83 427 61 408 8.23e-35 134
Msa1024740 MtrunA17_Chr2g0283851 29.223 373 204 15 87 427 56 400 1.01e-34 133
Msa1024740 MtrunA17_Chr6g0476041 25.485 412 261 15 40 427 125 514 1.33e-34 134
Msa1024740 MtrunA17_Chr1g0188191 25.479 365 232 14 86 427 234 581 2.13e-33 132
Msa1024740 MtrunA17_Chr4g0070341 27.596 366 215 13 86 427 132 471 2.17e-32 127
Msa1024740 MtrunA17_Chr8g0384421 25.737 373 219 14 83 427 130 472 3.25e-32 127
Msa1024740 MtrunA17_Chr4g0049421 26.975 367 221 15 86 427 48 392 2.07e-31 124
Msa1024740 MtrunA17_Chr6g0451321 25.348 359 242 10 82 427 112 457 3.38e-30 121
Msa1024740 MtrunA17_Chr6g0455901 26.446 363 233 12 84 427 69 416 2.08e-28 115
Msa1024740 MtrunA17_Chr7g0221271 32.273 220 116 6 7 213 6 205 2.18e-24 100
Msa1024740 MtrunA17_Chr7g0221291 44.330 97 53 1 82 178 75 170 5.64e-22 92.4
Msa1024740 MtrunA17_Chr2g0287931 34.921 126 75 1 146 264 1 126 2.06e-16 75.5
Msa1024740 MtrunA17_Chr3g0085101 34.906 106 61 2 284 386 6 106 1.45e-15 72.8
Msa1024740 MtrunA17_Chr1g0209931 35.294 102 50 2 326 427 7 92 6.88e-14 67.4
Msa1024740 MtrunA17_Chr5g0429211 41.096 73 43 0 142 214 195 267 1.56e-11 64.7
Msa1024740 MtrunA17_Chr5g0429191 54.167 48 17 2 374 420 2 45 6.07e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1024740 AT5G01360.1 64.371 421 144 2 13 427 14 434 0.0 568
Msa1024740 AT5G01360.2 70.339 354 104 1 75 427 25 378 0.0 546
Msa1024740 AT1G73140.1 48.159 353 175 3 76 427 60 405 8.19e-126 370
Msa1024740 AT3G55990.1 47.486 358 186 2 68 423 122 479 2.22e-125 372
Msa1024740 AT2G40150.1 47.989 348 173 2 84 423 69 416 4.52e-123 364
Msa1024740 AT2G40320.1 39.173 411 240 1 17 427 22 422 7.11e-119 353
Msa1024740 AT3G11030.1 44.348 345 191 1 84 427 104 448 4.40e-115 344
Msa1024740 AT2G40160.2 44.126 349 190 5 84 427 75 423 3.06e-110 332
Msa1024740 AT2G40160.1 44.348 345 187 5 84 423 75 419 4.80e-110 331
Msa1024740 AT5G01620.2 40.648 401 215 9 36 427 63 449 2.67e-108 327
Msa1024740 AT5G01620.1 40.648 401 215 9 36 427 63 449 2.67e-108 327
Msa1024740 AT5G01620.3 43.678 348 190 5 82 427 114 457 3.38e-107 324
Msa1024740 AT2G38320.1 42.618 359 198 5 75 427 48 404 6.28e-105 317
Msa1024740 AT2G38320.2 43.750 320 172 5 114 427 4 321 1.42e-94 288
Msa1024740 AT5G58600.1 37.571 354 204 8 79 427 59 400 5.81e-84 263
Msa1024740 AT2G30900.1 40.290 345 181 9 86 427 43 365 7.01e-83 259
Msa1024740 AT3G54260.1 38.551 345 188 8 86 427 51 374 1.21e-81 256
Msa1024740 AT3G62390.1 37.784 352 196 9 84 427 136 472 3.94e-81 258
Msa1024740 AT1G78710.1 36.705 346 196 7 82 427 34 356 1.43e-79 250
Msa1024740 AT5G20590.1 36.676 349 204 6 86 427 141 479 3.39e-78 251
Msa1024740 AT3G12060.1 35.509 383 217 8 52 427 176 535 3.74e-78 253
Msa1024740 AT5G06700.1 35.677 384 222 9 52 427 228 594 5.20e-77 251
Msa1024740 AT2G34070.1 34.493 345 203 5 83 427 62 383 1.44e-76 243
Msa1024740 AT2G42570.1 34.571 350 205 8 78 427 39 364 2.84e-76 242
Msa1024740 AT2G31110.2 34.985 343 199 8 85 427 44 362 4.80e-76 241
Msa1024740 AT5G49340.1 38.136 354 195 10 86 427 100 441 1.04e-75 243
Msa1024740 AT1G29050.1 34.493 345 202 6 83 427 58 378 2.34e-74 237
Msa1024740 AT3G14850.2 35.484 341 199 6 83 423 31 350 1.60e-72 232
Msa1024740 AT2G40160.3 44.958 238 128 3 84 318 75 312 2.75e-72 230
Msa1024740 AT2G30010.1 36.813 364 199 11 79 427 49 396 2.14e-71 230
Msa1024740 AT1G48880.1 35.795 352 191 9 85 427 114 439 2.25e-71 232
Msa1024740 AT2G30010.2 36.813 364 199 11 79 427 92 439 4.76e-71 231
Msa1024740 AT1G60790.1 33.512 373 217 10 71 427 175 532 1.77e-67 224
Msa1024740 AT3G06080.2 34.930 355 206 9 86 427 103 445 1.47e-63 212
Msa1024740 AT5G19160.1 34.174 357 209 7 86 427 99 444 4.67e-62 208
Msa1024740 AT5G06230.2 33.884 363 206 10 83 427 18 364 5.00e-60 200
Msa1024740 AT5G06230.1 33.978 362 207 9 83 427 59 405 1.00e-59 200
Msa1024740 AT3G62390.2 37.860 243 140 4 84 319 136 374 8.60e-57 192
Msa1024740 AT1G78710.2 31.214 346 162 8 82 427 27 296 3.83e-55 185
Msa1024740 AT2G30900.2 42.035 226 120 6 86 309 43 259 6.97e-54 181
Msa1024740 AT5G58600.2 38.174 241 140 5 79 318 59 291 8.21e-54 181
Msa1024740 AT3G11570.1 32.456 342 194 10 103 427 98 419 3.61e-53 183
Msa1024740 AT2G31110.3 35.556 225 136 4 85 309 44 259 1.91e-51 174
Msa1024740 AT5G20590.2 36.667 240 143 3 86 318 141 378 4.32e-51 177
Msa1024740 AT2G34070.2 32.103 271 162 4 157 427 1 249 4.36e-51 173
Msa1024740 AT5G19160.2 37.083 240 142 3 86 318 99 336 7.84e-48 167
Msa1024740 AT3G14850.1 32.959 267 159 5 157 423 1 247 4.69e-47 162
Msa1024740 AT3G06080.1 37.759 241 139 5 86 318 103 340 3.08e-46 163
Msa1024740 AT1G70230.1 28.169 355 228 9 82 427 75 411 8.62e-41 150
Msa1024740 AT5G64020.1 28.997 369 218 16 86 427 57 408 9.76e-41 150
Msa1024740 AT2G31110.1 33.621 232 131 7 196 427 6 214 5.67e-39 140
Msa1024740 AT5G06230.3 32.669 251 150 5 83 318 59 305 1.47e-38 141
Msa1024740 AT2G14530.1 26.722 363 233 10 83 427 59 406 6.83e-37 139
Msa1024740 AT1G01430.1 27.348 362 236 12 83 427 96 447 1.48e-36 139
Msa1024740 AT2G37720.1 27.957 372 216 15 81 427 138 482 2.32e-36 139
Msa1024740 AT5G64470.3 27.401 354 231 13 86 427 55 394 4.98e-36 137
Msa1024740 AT5G15890.1 27.708 397 245 13 50 427 149 522 9.49e-35 135
Msa1024740 AT3G02440.2 27.978 361 222 13 86 427 135 476 5.72e-34 132
Msa1024740 AT3G02440.1 27.978 361 222 13 86 427 127 468 6.20e-34 132
Msa1024740 AT4G25360.1 26.171 363 236 12 85 427 174 524 1.08e-33 132
Msa1024740 AT4G25360.2 26.171 363 236 12 85 427 174 524 1.08e-33 132
Msa1024740 AT4G01080.1 24.432 352 244 10 83 424 88 427 6.22e-33 129
Msa1024740 AT5G64470.2 27.072 362 228 15 86 427 55 400 2.17e-32 127
Msa1024740 AT5G51640.1 26.329 395 240 16 59 427 119 488 2.30e-32 128
Msa1024740 AT5G20680.6 25.064 391 252 15 55 427 90 457 2.99e-31 124
Msa1024740 AT4G23790.1 26.400 375 229 14 80 427 73 427 3.43e-31 124
Msa1024740 AT5G20680.4 25.064 391 252 15 55 427 184 551 5.21e-31 125
Msa1024740 AT5G20680.1 25.064 391 252 15 55 427 184 551 5.21e-31 125
Msa1024740 AT5G20680.3 25.064 391 252 15 55 427 184 551 5.21e-31 125
Msa1024740 AT5G20680.5 25.064 391 252 15 55 427 184 551 5.21e-31 125
Msa1024740 AT5G20680.2 25.064 391 252 15 55 427 166 533 5.94e-31 125
Msa1024740 AT5G15900.1 27.596 366 222 15 84 427 65 409 8.71e-30 120
Msa1024740 AT5G15900.2 27.596 366 222 15 84 427 84 428 9.24e-30 120
Msa1024740 AT4G11090.1 25.333 375 231 14 80 427 73 425 3.30e-29 119
Msa1024740 AT3G28150.1 23.502 434 257 15 17 427 29 410 1.70e-26 110
Msa1024740 AT5G64470.4 27.509 269 177 11 86 343 55 316 9.44e-20 90.1
Msa1024740 AT5G64470.1 26.449 276 186 10 86 350 55 324 1.78e-19 89.4

Find 82 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAAGACTTGGGCTAAT+TGG 0.164498 7_1:+54562966 Msa1024740:CDS
GAAAATTGTCTTTCTATATA+TGG 0.208909 7_1:-54561863 None:intergenic
GCAACATTGCCAATGGAAAA+TGG 0.220734 7_1:+54561795 Msa1024740:CDS
CTTGGCAAGGTGCAGTCTTC+TGG 0.225828 7_1:-54561938 None:intergenic
AATATTTGATTCCATGTATC+TGG 0.237560 7_1:-54563935 None:intergenic
ACAAGGTTTGAACTTGAAAA+TGG 0.243164 7_1:-54561339 None:intergenic
TCTTCAGTGTATACTGAAAA+TGG 0.259741 7_1:+54563836 Msa1024740:CDS
TTTAGTCTGGTGTTCTTTCT+AGG 0.269729 7_1:-54561362 None:intergenic
ACAAGTTATGTCAGTGTAGA+TGG 0.304836 7_1:-54561840 None:intergenic
ATTCTACTGGGCCCCATATC+TGG 0.307323 7_1:+54562404 Msa1024740:CDS
AACACTGACATACATTTCAT+TGG 0.355620 7_1:+54562435 Msa1024740:CDS
CCTTTCCTCATGATCCCTTC+AGG 0.359239 7_1:+54561200 Msa1024740:exon
TTTGAAGACTTGGGCTAATT+GGG 0.366796 7_1:+54562967 Msa1024740:CDS
CATTTACCAGAAGTCAAGAT+TGG 0.370501 7_1:+54563633 Msa1024740:intron
GTTACGTTGATGAATGTAAC+TGG 0.382881 7_1:-54563782 None:intergenic
AGTTAAAGCATAGTATGTTT+TGG 0.385561 7_1:-54561045 None:intergenic
AGATGAAATGAAAAGATCTA+TGG 0.391811 7_1:+54560906 Msa1024740:five_prime_UTR
TGTAGATGGGCTTTATTGAT+TGG 0.392973 7_1:-54561826 None:intergenic
ATATCAGAATATAGAATTGA+TGG 0.401543 7_1:+54563809 Msa1024740:CDS
GGGAAAAGACTACTATTTGT+AGG 0.402810 7_1:+54562097 Msa1024740:CDS
GTGTTAGACTCAACCAGATA+TGG 0.402888 7_1:-54562417 None:intergenic
ATGCTAGTATAGAATTCTAC+TGG 0.404319 7_1:+54562391 Msa1024740:CDS
ACAAGTTAGCTTTGAAGACT+TGG 0.409219 7_1:+54562957 Msa1024740:CDS
CAAATAGAGATGATAATGAT+AGG 0.414378 7_1:-54561257 None:intergenic
ATTTACCAGAAGTCAAGATT+GGG 0.419364 7_1:+54563634 Msa1024740:intron
CAACATTGCCAATGGAAAAT+GGG 0.423964 7_1:+54561796 Msa1024740:CDS
TATGGTGGATGAGTGGTTCT+AGG 0.424096 7_1:+54562550 Msa1024740:CDS
TTCACTTCAAAGAAATCAAT+GGG 0.450238 7_1:+54562123 Msa1024740:CDS
TGCATACATTGGTGTTTGCC+TGG 0.450244 7_1:+54563908 Msa1024740:CDS
GTCTTCATCATTCTGTTACA+TGG 0.452348 7_1:+54561125 Msa1024740:five_prime_UTR
AATGAATTAGAATGAATTAG+TGG 0.454247 7_1:-54561151 None:intergenic
CTGGTGTTCTTTCTAGGACA+AGG 0.456429 7_1:-54561356 None:intergenic
TCATTTAGCAATGGATTTGA+AGG 0.461734 7_1:+54562905 Msa1024740:CDS
ATTCACTTCAAAGAAATCAA+TGG 0.464902 7_1:+54562122 Msa1024740:CDS
AGATTCTGATTATCAACATT+GGG 0.465574 7_1:+54561907 Msa1024740:CDS
AAAGAAAAGGATAATAAAAG+TGG 0.472940 7_1:+54562464 Msa1024740:CDS
GGAAAAGACTACTATTTGTA+GGG 0.479501 7_1:+54562098 Msa1024740:CDS
AGGGTAAGAATGAGTTGAAA+GGG 0.481191 7_1:-54560989 None:intergenic
TGTTAGACTCAACCAGATAT+GGG 0.481344 7_1:-54562416 None:intergenic
GAGATGATAATGATAGGAAA+AGG 0.487294 7_1:-54561251 None:intergenic
AAAGCTAACTTGTATGCTAC+TGG 0.494526 7_1:-54562947 None:intergenic
CTATCAATCCAAACAAAACA+AGG 0.508070 7_1:+54562999 Msa1024740:CDS
CAGATTCTGATTATCAACAT+TGG 0.508716 7_1:+54561906 Msa1024740:CDS
TGCCTGGTGTTCCAGATACA+TGG 0.510835 7_1:+54563924 Msa1024740:CDS
GAGGGTAAGAATGAGTTGAA+AGG 0.515198 7_1:-54560990 None:intergenic
CAAGTTAGCTTTGAAGACTT+GGG 0.522945 7_1:+54562958 Msa1024740:CDS
TTTGTGAGCCATACCTTGCT+TGG 0.523735 7_1:+54560813 Msa1024740:five_prime_UTR
CTGATTATCAACATTGGGAG+TGG 0.529866 7_1:+54561912 Msa1024740:CDS
TTAATATACATGACCAAGCA+AGG 0.536471 7_1:-54560826 None:intergenic
ATGCAACATGGATTGATGAC+AGG 0.540613 7_1:+54561750 Msa1024740:CDS
CAAGTTATGTCAGTGTAGAT+GGG 0.554652 7_1:-54561839 None:intergenic
AGGTGATAAGAAAGTTGATG+AGG 0.554872 7_1:+54561718 Msa1024740:intron
CATTTAGCAATGGATTTGAA+GGG 0.555614 7_1:+54562906 Msa1024740:CDS
TCATTGGAGATACAAAGAAA+AGG 0.557285 7_1:+54562451 Msa1024740:CDS
ATACATGACCAAGCAAGGTA+TGG 0.561071 7_1:-54560821 None:intergenic
CATGTAGAATATTTATCATG+TGG 0.564503 7_1:-54560960 None:intergenic
TCATTCAGTCTTCAAAGTCA+AGG 0.570752 7_1:+54562213 Msa1024740:CDS
AATTGTTAAGTGAAGAAGAG+AGG 0.575802 7_1:+54563864 Msa1024740:CDS
AGATGGGGTTCATTTAGCAA+TGG 0.578823 7_1:+54562896 Msa1024740:intron
GAAGAATGCAACATTGCCAA+TGG 0.580954 7_1:+54561788 Msa1024740:CDS
TTCCATGTATCTGGAACACC+AGG 0.581846 7_1:-54563926 None:intergenic
ATGTAGAATATTTATCATGT+GGG 0.583411 7_1:-54560959 None:intergenic
GGAATAATGAAAATCCATAG+AGG 0.592887 7_1:+54561221 Msa1024740:CDS
TTTACCAGAAGTCAAGATTG+GGG 0.598053 7_1:+54563635 Msa1024740:intron
CAGAAGACTGCACCTTGCCA+AGG 0.599499 7_1:+54561939 Msa1024740:CDS
TTTACTTGCAAAATCAAGGG+TGG 0.602308 7_1:+54564114 Msa1024740:three_prime_UTR
GAAAAGACTACTATTTGTAG+GGG 0.609179 7_1:+54562099 Msa1024740:CDS
CAGTGTATACTGAAAATGGA+GGG 0.619439 7_1:+54563840 Msa1024740:CDS
CCTGAAGGGATCATGAGGAA+AGG 0.623789 7_1:-54561200 None:intergenic
AAAATGCAGATTGCATACAT+TGG 0.635099 7_1:+54563897 Msa1024740:CDS
ACCACTCATCCACCATACAT+AGG 0.637859 7_1:-54562544 None:intergenic
CAATGTCACCTACACACACA+AGG 0.637869 7_1:+54563035 Msa1024740:CDS
GAGAAAGACCTTGTGTGTGT+AGG 0.641401 7_1:-54563043 None:intergenic
GTTAGACTCAACCAGATATG+GGG 0.642606 7_1:-54562415 None:intergenic
TGCTAGTATAGAATTCTACT+GGG 0.645271 7_1:+54562392 Msa1024740:CDS
TTATTCCTGAAGGGATCATG+AGG 0.647125 7_1:-54561205 None:intergenic
GTGTGGAACTTACCTTGGCA+AGG 0.655568 7_1:-54561951 None:intergenic
TGATAAACGTATAATGAGTG+TGG 0.658568 7_1:+54563730 Msa1024740:CDS
AGGAGATTGTAAATGCAACA+TGG 0.660136 7_1:+54561738 Msa1024740:CDS
ACCTATGTATGGTGGATGAG+TGG 0.661766 7_1:+54562543 Msa1024740:CDS
TATCAATCCAAACAAAACAA+GGG 0.665595 7_1:+54563000 Msa1024740:CDS
TCAGTGTATACTGAAAATGG+AGG 0.667022 7_1:+54563839 Msa1024740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAAGTGTATATTATA+AGG - chr7_1:54563108-54563127 None:intergenic 10.0%
!!! CAATTTTCTTGTATAAAAAA+TGG + chr7_1:54561878-54561897 Msa1024740:CDS 15.0%
!! CAATAAAAGTTATTACTTTA+AGG + chr7_1:54562304-54562323 Msa1024740:intron 15.0%
!! TTAATGATTTAATTCGAATA+GGG - chr7_1:54562602-54562621 None:intergenic 15.0%
!! TTTAATGATTTAATTCGAAT+AGG - chr7_1:54562603-54562622 None:intergenic 15.0%
!! ATATTATAATACAACAAAGA+AGG - chr7_1:54563407-54563426 None:intergenic 15.0%
!! ATGTAGAATATTTATCATGT+GGG - chr7_1:54560962-54560981 None:intergenic 20.0%
!! AATGAATTAGAATGAATTAG+TGG - chr7_1:54561154-54561173 None:intergenic 20.0%
!! ATCATCGCATAAAAAATTTA+GGG - chr7_1:54561670-54561689 None:intergenic 20.0%
!! GAAAATTGTCTTTCTATATA+TGG - chr7_1:54561866-54561885 None:intergenic 20.0%
!!! TTCATAGATTTTTGATTTTG+AGG - chr7_1:54562181-54562200 None:intergenic 20.0%
!! AATCAAAAATCTATGAAAAG+AGG + chr7_1:54562184-54562203 Msa1024740:CDS 20.0%
!! ATCAAAAATCTATGAAAAGA+GGG + chr7_1:54562185-54562204 Msa1024740:CDS 20.0%
!! ATAGTACTAATATAGATACT+TGG + chr7_1:54562345-54562364 Msa1024740:intron 20.0%
!! AAAGAAAAGGATAATAAAAG+TGG + chr7_1:54562464-54562483 Msa1024740:CDS 20.0%
!!! AATGTCATGATTTTAAATTG+CGG + chr7_1:54562644-54562663 Msa1024740:intron 20.0%
!!! TTTTTATACTCTTAAACCAA+AGG + chr7_1:54562836-54562855 Msa1024740:intron 20.0%
!!! TTTTATACTCTTAAACCAAA+GGG + chr7_1:54562837-54562856 Msa1024740:intron 20.0%
!!! TCTAGTTTATGAATTTTAGA+TGG + chr7_1:54562879-54562898 Msa1024740:intron 20.0%
!!! CTAGTTTATGAATTTTAGAT+GGG + chr7_1:54562880-54562899 Msa1024740:intron 20.0%
!!! TAGTTTATGAATTTTAGATG+GGG + chr7_1:54562881-54562900 Msa1024740:intron 20.0%
!!! AGTTTTTCTTTTAACAATGT+TGG + chr7_1:54563308-54563327 Msa1024740:intron 20.0%
!! AGAAAATAACATAATTCAGT+CGG - chr7_1:54563472-54563491 None:intergenic 20.0%
!! ATATCAGAATATAGAATTGA+TGG + chr7_1:54563809-54563828 Msa1024740:CDS 20.0%
!!! TACATGGAATCAAATATTTT+TGG + chr7_1:54563940-54563959 Msa1024740:CDS 20.0%
!!! AATTTTTACTTGCAAAATCA+AGG + chr7_1:54564110-54564129 Msa1024740:three_prime_UTR 20.0%
!!! ATTTTTACTTGCAAAATCAA+GGG + chr7_1:54564111-54564130 Msa1024740:three_prime_UTR 20.0%
! AGATGAAATGAAAAGATCTA+TGG + chr7_1:54560906-54560925 Msa1024740:five_prime_UTR 25.0%
! CATGTAGAATATTTATCATG+TGG - chr7_1:54560963-54560982 None:intergenic 25.0%
! ATGTCAAAAAAGATACTAGA+GGG - chr7_1:54561011-54561030 None:intergenic 25.0%
! AATGTCAAAAAAGATACTAG+AGG - chr7_1:54561012-54561031 None:intergenic 25.0%
!! AGTTAAAGCATAGTATGTTT+TGG - chr7_1:54561048-54561067 None:intergenic 25.0%
!! CAAATAGAGATGATAATGAT+AGG - chr7_1:54561260-54561279 None:intergenic 25.0%
! CATCATCGCATAAAAAATTT+AGG - chr7_1:54561671-54561690 None:intergenic 25.0%
! AGATTCTGATTATCAACATT+GGG + chr7_1:54561907-54561926 Msa1024740:CDS 25.0%
! ATTCACTTCAAAGAAATCAA+TGG + chr7_1:54562122-54562141 Msa1024740:CDS 25.0%
! TTCACTTCAAAGAAATCAAT+GGG + chr7_1:54562123-54562142 Msa1024740:CDS 25.0%
! TCAAAAATCTATGAAAAGAG+GGG + chr7_1:54562186-54562205 Msa1024740:CDS 25.0%
! TCAAAGAAAGAGCAAAAAAT+TGG + chr7_1:54562493-54562512 Msa1024740:CDS 25.0%
!! TTGTTTTCAATACCTATGTA+TGG + chr7_1:54562532-54562551 Msa1024740:CDS 25.0%
!!! TTCATCATGGTTTTAAATTG+CGG - chr7_1:54562790-54562809 None:intergenic 25.0%
! TATCAATCCAAACAAAACAA+GGG + chr7_1:54563000-54563019 Msa1024740:CDS 25.0%
!!! TCTCTTCTAAAGTATTTTCT+TGG + chr7_1:54563064-54563083 Msa1024740:intron 25.0%
! AAGTAGACTAAATATTGCAA+TGG - chr7_1:54563188-54563207 None:intergenic 25.0%
! AATATTTGATTCCATGTATC+TGG - chr7_1:54563938-54563957 None:intergenic 25.0%
TTAATATACATGACCAAGCA+AGG - chr7_1:54560829-54560848 None:intergenic 30.0%
!!! GGTTTTATGCATTTTTGAGT+AGG - chr7_1:54561076-54561095 None:intergenic 30.0%
AAAAAAGGTTTAGAGAGGTA+AGG - chr7_1:54561097-54561116 None:intergenic 30.0%
TGAAGACATTGCACAAAAAA+AGG - chr7_1:54561112-54561131 None:intergenic 30.0%
! GGATTTTCATTATTCCTGAA+GGG - chr7_1:54561217-54561236 None:intergenic 30.0%
! TGGATTTTCATTATTCCTGA+AGG - chr7_1:54561218-54561237 None:intergenic 30.0%
GGAATAATGAAAATCCATAG+AGG + chr7_1:54561221-54561240 Msa1024740:CDS 30.0%
! GAGATGATAATGATAGGAAA+AGG - chr7_1:54561254-54561273 None:intergenic 30.0%
ACAAGGTTTGAACTTGAAAA+TGG - chr7_1:54561342-54561361 None:intergenic 30.0%
!! AGACTTACTTGATTTTAGTC+TGG - chr7_1:54561378-54561397 None:intergenic 30.0%
CGAAAATGAAGATATAGTTG+TGG - chr7_1:54561414-54561433 None:intergenic 30.0%
! ATTTTACGATCCGTATCAAA+TGG + chr7_1:54561643-54561662 Msa1024740:intron 30.0%
! AATTTAGGGTCCATTTGATA+CGG - chr7_1:54561656-54561675 None:intergenic 30.0%
! GTTAAAAACCCATTTTCCAT+TGG - chr7_1:54561807-54561826 None:intergenic 30.0%
CAGATTCTGATTATCAACAT+TGG + chr7_1:54561906-54561925 Msa1024740:CDS 30.0%
CAATTAACATGTTTGGACTT+TGG - chr7_1:54561978-54561997 None:intergenic 30.0%
GGAATCACAATTAACATGTT+TGG - chr7_1:54561985-54562004 None:intergenic 30.0%
! AGGCTAAAAGATGGAAATTT+TGG - chr7_1:54562006-54562025 None:intergenic 30.0%
CATTGTTTAATACACTTGCA+AGG - chr7_1:54562026-54562045 None:intergenic 30.0%
TTAGCACTCAAAAAACTTCA+AGG + chr7_1:54562076-54562095 Msa1024740:CDS 30.0%
TAGCACTCAAAAAACTTCAA+GGG + chr7_1:54562077-54562096 Msa1024740:CDS 30.0%
GGAAAAGACTACTATTTGTA+GGG + chr7_1:54562098-54562117 Msa1024740:CDS 30.0%
GAAAAGACTACTATTTGTAG+GGG + chr7_1:54562099-54562118 Msa1024740:CDS 30.0%
! ATGGGAATCTTTTGTATGTT+TGG + chr7_1:54562141-54562160 Msa1024740:CDS 30.0%
! CTTTTGTATGTTTGGTAGAA+TGG + chr7_1:54562149-54562168 Msa1024740:CDS 30.0%
!! TTAAGCCTTGTTTGGATAAA+CGG - chr7_1:54562277-54562296 None:intergenic 30.0%
!! GAATTTGTTTAAGCCTTGTT+TGG - chr7_1:54562285-54562304 None:intergenic 30.0%
ATGCTAGTATAGAATTCTAC+TGG + chr7_1:54562391-54562410 Msa1024740:CDS 30.0%
TGCTAGTATAGAATTCTACT+GGG + chr7_1:54562392-54562411 Msa1024740:CDS 30.0%
AACACTGACATACATTTCAT+TGG + chr7_1:54562435-54562454 Msa1024740:CDS 30.0%
TCATTGGAGATACAAAGAAA+AGG + chr7_1:54562451-54562470 Msa1024740:CDS 30.0%
! TTTTCAATACCTATGTATGG+TGG + chr7_1:54562535-54562554 Msa1024740:CDS 30.0%
CATATTTCACCGCAATATAA+TGG - chr7_1:54562694-54562713 None:intergenic 30.0%
TCATTGTTGAATGTTCATCA+TGG - chr7_1:54562803-54562822 None:intergenic 30.0%
TTAAACCAAAGGGATGAAAA+TGG + chr7_1:54562847-54562866 Msa1024740:intron 30.0%
! AAATACCATTTTCATCCCTT+TGG - chr7_1:54562855-54562874 None:intergenic 30.0%
! TCATTTAGCAATGGATTTGA+AGG + chr7_1:54562905-54562924 Msa1024740:CDS 30.0%
! CATTTAGCAATGGATTTGAA+GGG + chr7_1:54562906-54562925 Msa1024740:CDS 30.0%
CTATCAATCCAAACAAAACA+AGG + chr7_1:54562999-54563018 Msa1024740:CDS 30.0%
GTGAGTATTATAAATCTCAG+AGG - chr7_1:54563240-54563259 None:intergenic 30.0%
! CTTGTAAGCAATTTTCTAGA+TGG - chr7_1:54563335-54563354 None:intergenic 30.0%
CATCTAGAAAATTGCTTACA+AGG + chr7_1:54563333-54563352 Msa1024740:intron 30.0%
ATTTACCAGAAGTCAAGATT+GGG + chr7_1:54563634-54563653 Msa1024740:intron 30.0%
!! AGTGAGAAAAAAGAAGCATT+GGG + chr7_1:54563697-54563716 Msa1024740:CDS 30.0%
TGATAAACGTATAATGAGTG+TGG + chr7_1:54563730-54563749 Msa1024740:CDS 30.0%
TCTTCAGTGTATACTGAAAA+TGG + chr7_1:54563836-54563855 Msa1024740:CDS 30.0%
AATTGTTAAGTGAAGAAGAG+AGG + chr7_1:54563864-54563883 Msa1024740:CDS 30.0%
AAAATGCAGATTGCATACAT+TGG + chr7_1:54563897-54563916 Msa1024740:CDS 30.0%
! AGGGTAAGAATGAGTTGAAA+GGG - chr7_1:54560992-54561011 None:intergenic 35.0%
GCACAAAAAAAGGTTTAGAG+AGG - chr7_1:54561102-54561121 None:intergenic 35.0%
GTCTTCATCATTCTGTTACA+TGG + chr7_1:54561125-54561144 Msa1024740:five_prime_UTR 35.0%
!!! GAAAAGGCATTTTTCCTCTA+TGG - chr7_1:54561238-54561257 None:intergenic 35.0%
TTTAGTCTGGTGTTCTTTCT+AGG - chr7_1:54561365-54561384 None:intergenic 35.0%
AACTGCTTCGAATGAAAAGT+TGG + chr7_1:54561553-54561572 Msa1024740:intron 35.0%
!! AGGTGATAAGAAAGTTGATG+AGG + chr7_1:54561718-54561737 Msa1024740:intron 35.0%
AGGAGATTGTAAATGCAACA+TGG + chr7_1:54561738-54561757 Msa1024740:CDS 35.0%
CAACATTGCCAATGGAAAAT+GGG + chr7_1:54561796-54561815 Msa1024740:CDS 35.0%
!! TGTAGATGGGCTTTATTGAT+TGG - chr7_1:54561829-54561848 None:intergenic 35.0%
CAAGTTATGTCAGTGTAGAT+GGG - chr7_1:54561842-54561861 None:intergenic 35.0%
ACAAGTTATGTCAGTGTAGA+TGG - chr7_1:54561843-54561862 None:intergenic 35.0%
!!! AGTTTTTTGAGTGCTAACAC+TGG - chr7_1:54562073-54562092 None:intergenic 35.0%
GGGAAAAGACTACTATTTGT+AGG + chr7_1:54562097-54562116 Msa1024740:CDS 35.0%
TCATTCAGTCTTCAAAGTCA+AGG + chr7_1:54562213-54562232 Msa1024740:CDS 35.0%
TTTAGCCGTTTATCCAAACA+AGG + chr7_1:54562269-54562288 Msa1024740:intron 35.0%
TGTTAGACTCAACCAGATAT+GGG - chr7_1:54562419-54562438 None:intergenic 35.0%
GAAAGAGCAAAAAATTGGAC+AGG + chr7_1:54562498-54562517 Msa1024740:CDS 35.0%
TTAAATTGCGGTTGTAGTTG+CGG + chr7_1:54562656-54562675 Msa1024740:intron 35.0%
TTTCACCGCAATATAATGGT+TGG - chr7_1:54562690-54562709 None:intergenic 35.0%
AGTCAATGTAGCCACAATTA+CGG + chr7_1:54562723-54562742 Msa1024740:intron 35.0%
CAATTGCAGCCACAATATAA+CGG - chr7_1:54562757-54562776 None:intergenic 35.0%
! AAAGCTAACTTGTATGCTAC+TGG - chr7_1:54562950-54562969 None:intergenic 35.0%
!! ACAAGTTAGCTTTGAAGACT+TGG + chr7_1:54562957-54562976 Msa1024740:CDS 35.0%
!! CAAGTTAGCTTTGAAGACTT+GGG + chr7_1:54562958-54562977 Msa1024740:CDS 35.0%
TTTGAAGACTTGGGCTAATT+GGG + chr7_1:54562967-54562986 Msa1024740:CDS 35.0%
!!! AAGAAGACCCTTGTTTTGTT+TGG - chr7_1:54563010-54563029 None:intergenic 35.0%
!!! GTCTACTTTTTGTGATGAGT+AGG + chr7_1:54563200-54563219 Msa1024740:intron 35.0%
TGATGAGTAGGAATTGTACT+CGG + chr7_1:54563212-54563231 Msa1024740:intron 35.0%
TTAAGTCTAATGCAGGTGAT+TGG - chr7_1:54563275-54563294 None:intergenic 35.0%
ATCACCTGCATTAGACTTAA+TGG + chr7_1:54563275-54563294 Msa1024740:intron 35.0%
ATGATGCACATATACAGACA+CGG - chr7_1:54563544-54563563 None:intergenic 35.0%
ATAGTGCTCAACAAATCTCT+AGG - chr7_1:54563576-54563595 None:intergenic 35.0%
CATTTACCAGAAGTCAAGAT+TGG + chr7_1:54563633-54563652 Msa1024740:intron 35.0%
TTTACCAGAAGTCAAGATTG+GGG + chr7_1:54563635-54563654 Msa1024740:intron 35.0%
!!! CAATGCTTCTTTTTTCTCAC+TGG - chr7_1:54563698-54563717 None:intergenic 35.0%
! CAGTGAGAAAAAAGAAGCAT+TGG + chr7_1:54563696-54563715 Msa1024740:CDS 35.0%
!! GTGAGAAAAAAGAAGCATTG+GGG + chr7_1:54563698-54563717 Msa1024740:CDS 35.0%
! GTTACGTTGATGAATGTAAC+TGG - chr7_1:54563785-54563804 None:intergenic 35.0%
TCAGTGTATACTGAAAATGG+AGG + chr7_1:54563839-54563858 Msa1024740:CDS 35.0%
CAGTGTATACTGAAAATGGA+GGG + chr7_1:54563840-54563859 Msa1024740:CDS 35.0%
! TGTATGCAATCTGCATTTTG+TGG - chr7_1:54563896-54563915 None:intergenic 35.0%
TTTACTTGCAAAATCAAGGG+TGG + chr7_1:54564114-54564133 Msa1024740:three_prime_UTR 35.0%
ATACATGACCAAGCAAGGTA+TGG - chr7_1:54560824-54560843 None:intergenic 40.0%
! GAGGGTAAGAATGAGTTGAA+AGG - chr7_1:54560993-54561012 None:intergenic 40.0%
TTATTCCTGAAGGGATCATG+AGG - chr7_1:54561208-54561227 None:intergenic 40.0%
! CGCATGTTACTTGACTCTAA+AGG + chr7_1:54561432-54561451 Msa1024740:intron 40.0%
TGTATTGTGATTGTCCTAGC+AGG + chr7_1:54561698-54561717 Msa1024740:intron 40.0%
CAACTTTCTTATCACCTGCT+AGG - chr7_1:54561715-54561734 None:intergenic 40.0%
! ATGCAACATGGATTGATGAC+AGG + chr7_1:54561750-54561769 Msa1024740:CDS 40.0%
GAAGAATGCAACATTGCCAA+TGG + chr7_1:54561788-54561807 Msa1024740:CDS 40.0%
GCAACATTGCCAATGGAAAA+TGG + chr7_1:54561795-54561814 Msa1024740:CDS 40.0%
CTGATTATCAACATTGGGAG+TGG + chr7_1:54561912-54561931 Msa1024740:CDS 40.0%
ACACTTGCAAGGCTAAAAGA+TGG - chr7_1:54562015-54562034 None:intergenic 40.0%
ACTTGGATGTGTTGTAACAC+AGG + chr7_1:54562362-54562381 Msa1024740:intron 40.0%
GTTAGACTCAACCAGATATG+GGG - chr7_1:54562418-54562437 None:intergenic 40.0%
GTGTTAGACTCAACCAGATA+TGG - chr7_1:54562420-54562439 None:intergenic 40.0%
AGCAAAAAATTGGACAGGAG+TGG + chr7_1:54562503-54562522 Msa1024740:CDS 40.0%
AGATGGGGTTCATTTAGCAA+TGG + chr7_1:54562896-54562915 Msa1024740:intron 40.0%
! CTTTGAAGACTTGGGCTAAT+TGG + chr7_1:54562966-54562985 Msa1024740:CDS 40.0%
GCTTCCATTAAGTCTAATGC+AGG - chr7_1:54563282-54563301 None:intergenic 40.0%
!! AAAAAGAAGCATTGGGGAAC+TGG + chr7_1:54563704-54563723 Msa1024740:CDS 40.0%
TTTGTGAGCCATACCTTGCT+TGG + chr7_1:54560813-54560832 Msa1024740:five_prime_UTR 45.0%
!! CTGGTGTTCTTTCTAGGACA+AGG - chr7_1:54561359-54561378 None:intergenic 45.0%
TTGGAGTGTGGAACTTACCT+TGG - chr7_1:54561959-54561978 None:intergenic 45.0%
!! CATGTTTGGACTTTGGAGTG+TGG - chr7_1:54561971-54561990 None:intergenic 45.0%
!! ACCTATGTATGGTGGATGAG+TGG + chr7_1:54562543-54562562 Msa1024740:CDS 45.0%
ACCACTCATCCACCATACAT+AGG - chr7_1:54562547-54562566 None:intergenic 45.0%
!! TATGGTGGATGAGTGGTTCT+AGG + chr7_1:54562550-54562569 Msa1024740:CDS 45.0%
CGCTGCCAACCATTATATTG+CGG + chr7_1:54562682-54562701 Msa1024740:intron 45.0%
TAGCCACAATTACGGTTGTG+AGG + chr7_1:54562731-54562750 Msa1024740:intron 45.0%
GTTGTGAGGCCGTTATATTG+TGG + chr7_1:54562745-54562764 Msa1024740:intron 45.0%
CAATGTCACCTACACACACA+AGG + chr7_1:54563035-54563054 Msa1024740:CDS 45.0%
GAGAAAGACCTTGTGTGTGT+AGG - chr7_1:54563046-54563065 None:intergenic 45.0%
GTTTCCCCAATCTTGACTTC+TGG - chr7_1:54563642-54563661 None:intergenic 45.0%
! TGCATACATTGGTGTTTGCC+TGG + chr7_1:54563908-54563927 Msa1024740:CDS 45.0%
! TTCCATGTATCTGGAACACC+AGG - chr7_1:54563929-54563948 None:intergenic 45.0%
CCTGAAGGGATCATGAGGAA+AGG - chr7_1:54561203-54561222 None:intergenic 50.0%
CCTTTCCTCATGATCCCTTC+AGG + chr7_1:54561200-54561219 Msa1024740:exon 50.0%
GTGTGGAACTTACCTTGGCA+AGG - chr7_1:54561954-54561973 None:intergenic 50.0%
ATTCTACTGGGCCCCATATC+TGG + chr7_1:54562404-54562423 Msa1024740:CDS 50.0%
TGTGGCTGCAATTGCGATTG+TGG + chr7_1:54562763-54562782 Msa1024740:intron 50.0%
TGCCTGGTGTTCCAGATACA+TGG + chr7_1:54563924-54563943 Msa1024740:CDS 50.0%
CTTGGCAAGGTGCAGTCTTC+TGG - chr7_1:54561941-54561960 None:intergenic 55.0%
CAGAAGACTGCACCTTGCCA+AGG + chr7_1:54561939-54561958 Msa1024740:CDS 55.0%
CGGCCTCACAACCGTAATTG+TGG - chr7_1:54562737-54562756 None:intergenic 55.0%
GTCAGTGTCCGTGTCATGTC+TGG + chr7_1:54563515-54563534 Msa1024740:intron 55.0%
CACGGACACCAGACATGACA+CGG - chr7_1:54563526-54563545 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 54560792 54564197 54560792 ID=Msa1024740;Name=Msa1024740
chr7_1 mRNA 54560792 54564197 54560792 ID=Msa1024740-mRNA-1;Parent=Msa1024740;Name=Msa1024740-mRNA-1;_AED=0.10;_eAED=0.10;_QI=417|1|1|1|1|1|6|224|427
chr7_1 exon 54560792 54561389 54560792 ID=Msa1024740-mRNA-1:exon:10839;Parent=Msa1024740-mRNA-1
chr7_1 exon 54561720 54561960 54561720 ID=Msa1024740-mRNA-1:exon:10840;Parent=Msa1024740-mRNA-1
chr7_1 exon 54562063 54562234 54562063 ID=Msa1024740-mRNA-1:exon:10841;Parent=Msa1024740-mRNA-1
chr7_1 exon 54562384 54562583 54562384 ID=Msa1024740-mRNA-1:exon:10842;Parent=Msa1024740-mRNA-1
chr7_1 exon 54562898 54563056 54562898 ID=Msa1024740-mRNA-1:exon:10843;Parent=Msa1024740-mRNA-1
chr7_1 exon 54563643 54564197 54563643 ID=Msa1024740-mRNA-1:exon:10844;Parent=Msa1024740-mRNA-1
chr7_1 five_prime_UTR 54560792 54561208 54560792 ID=Msa1024740-mRNA-1:five_prime_utr;Parent=Msa1024740-mRNA-1
chr7_1 CDS 54561209 54561389 54561209 ID=Msa1024740-mRNA-1:cds;Parent=Msa1024740-mRNA-1
chr7_1 CDS 54561720 54561960 54561720 ID=Msa1024740-mRNA-1:cds;Parent=Msa1024740-mRNA-1
chr7_1 CDS 54562063 54562234 54562063 ID=Msa1024740-mRNA-1:cds;Parent=Msa1024740-mRNA-1
chr7_1 CDS 54562384 54562583 54562384 ID=Msa1024740-mRNA-1:cds;Parent=Msa1024740-mRNA-1
chr7_1 CDS 54562898 54563056 54562898 ID=Msa1024740-mRNA-1:cds;Parent=Msa1024740-mRNA-1
chr7_1 CDS 54563643 54563973 54563643 ID=Msa1024740-mRNA-1:cds;Parent=Msa1024740-mRNA-1
chr7_1 three_prime_UTR 54563974 54564197 54563974 ID=Msa1024740-mRNA-1:three_prime_utr;Parent=Msa1024740-mRNA-1
Gene Sequence

>Msa1024740

ATGATCCCTTCAGGAATAATGAAAATCCATAGAGGAAAAATGCCTTTTCCTATCATTATCATCTCTATTTGTATTCTTGTCTTCATTGCTGTTTTGTATGCTGAGAGACTCAGTTTTCTTTCTTCTAAGTCCATTTTCAAGTTCAAACCTTGTCCTAGAAAGAACACCAGACTAAAATCAAGTGATAAGAAAGTTGATGAGGAGATTGTAAATGCAACATGGATTGATGACAGGTTTGATTTTGACTCAGAAGAATGCAACATTGCCAATGGAAAATGGGTTTTTAACCAATCAATAAAGCCCATCTACACTGACATAACTTGTCCATATATAGAAAGACAATTTTCTTGTATAAAAAATGGTAGAACAGATTCTGATTATCAACATTGGGAGTGGCAGCCAGAAGACTGCACCTTGCCAAGTTTCAATCCAGTGTTAGCACTCAAAAAACTTCAAGGGAAAAGACTACTATTTGTAGGGGATTCACTTCAAAGAAATCAATGGGAATCTTTTGTATGTTTGGTAGAATGGATCATACCTCAAAATCAAAAATCTATGAAAAGAGGGGTTGTTCATTCAGTCTTCAAAGTCAAGGAATACAATGCTAGTATAGAATTCTACTGGGCCCCATATCTGGTTGAGTCTAACACTGACATACATTTCATTGGAGATACAAAGAAAAGGATAATAAAAGTGGATACTATCAAAGAAAGAGCAAAAAATTGGACAGGAGTGGATATTCTTGTTTTCAATACCTATGTATGGTGGATGAGTGGTTCTAGGATTAAATCATTATGGGGTTCATTTAGCAATGGATTTGAAGGGTATGAAGAATTTGATACACCAGTAGCATACAAGTTAGCTTTGAAGACTTGGGCTAATTGGGTTGACTCAACTATCAATCCAAACAAAACAAGGGTCTTCTTCACTACAATGTCACCTACACACACAAGAAGTCAAGATTGGGGAAACATGAAAGATGAGAAATGCTTCAATGAGACAAAGCCAGTGAGAAAAAAGAAGCATTGGGGAACTGGTTCTGATAAACGTATAATGAGTGTGGTAGCAAAAGTTGTGAAGAAAATGAAAGTTCCAGTTACATTCATCAACGTAACACAAATATCAGAATATAGAATTGATGGTCATTCTTCAGTGTATACTGAAAATGGAGGGAAATTGTTAAGTGAAGAAGAGAGGACAAATCCACAAAATGCAGATTGCATACATTGGTGTTTGCCTGGTGTTCCAGATACATGGAATCAAATATTTTTGGCAATGTTATAA

Protein sequence

>Msa1024740

MIPSGIMKIHRGKMPFPIIIISICILVFIAVLYAERLSFLSSKSIFKFKPCPRKNTRLKSSDKKVDEEIVNATWIDDRFDFDSEECNIANGKWVFNQSIKPIYTDITCPYIERQFSCIKNGRTDSDYQHWEWQPEDCTLPSFNPVLALKKLQGKRLLFVGDSLQRNQWESFVCLVEWIIPQNQKSMKRGVVHSVFKVKEYNASIEFYWAPYLVESNTDIHFIGDTKKRIIKVDTIKERAKNWTGVDILVFNTYVWWMSGSRIKSLWGSFSNGFEGYEEFDTPVAYKLALKTWANWVDSTINPNKTRVFFTTMSPTHTRSQDWGNMKDEKCFNETKPVRKKKHWGTGSDKRIMSVVAKVVKKMKVPVTFINVTQISEYRIDGHSSVYTENGGKLLSEEERTNPQNADCIHWCLPGVPDTWNQIFLAML*