Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286980 | XP_013445554.1 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286980 | sp|Q38945|DPNPH_ARATH | 68.435 | 377 | 100 | 4 | 9 | 378 | 9 | 373 | 5.49e-180 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286980 | A0A072U199 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1226720 | Msa1286980 | 0.831110 | 2.010065e-55 | -8.615850e-47 |
| Msa1286970 | Msa1286980 | 0.910829 | 1.209031e-82 | -8.615850e-47 |
| Msa0436200 | Msa1286980 | 0.802950 | 4.398467e-49 | -8.615850e-47 |
| Msa0262480 | Msa1286980 | 0.822667 | 2.095383e-53 | -8.615850e-47 |
| Msa0300350 | Msa1286980 | 0.802028 | 6.811607e-49 | -8.615850e-47 |
| Msa0524590 | Msa1286980 | 0.808223 | 3.441604e-50 | -8.615850e-47 |
| Msa0879850 | Msa1286980 | 0.804559 | 2.038580e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286980 | MtrunA17_Chr8g0360681 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 767 |
| Msa1286980 | MtrunA17_Chr2g0281361 | 68.158 | 380 | 118 | 1 | 2 | 378 | 87 | 466 | 0.0 | 542 |
| Msa1286980 | MtrunA17_Chr4g0048001 | 57.937 | 378 | 153 | 2 | 2 | 378 | 78 | 450 | 7.77e-153 | 438 |
| Msa1286980 | MtrunA17_Chr4g0052431 | 42.330 | 352 | 175 | 7 | 23 | 374 | 90 | 413 | 4.37e-87 | 270 |
| Msa1286980 | MtrunA17_Chr2g0281081 | 32.494 | 397 | 203 | 17 | 2 | 369 | 45 | 405 | 1.86e-41 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286980 | AT5G54390.1 | 68.435 | 377 | 100 | 4 | 9 | 378 | 9 | 373 | 0.0 | 507 |
| Msa1286980 | AT5G63980.1 | 43.490 | 361 | 174 | 6 | 6 | 366 | 3 | 333 | 6.96e-93 | 282 |
| Msa1286980 | AT5G09290.1 | 40.483 | 373 | 184 | 7 | 6 | 378 | 3 | 337 | 1.44e-84 | 261 |
| Msa1286980 | AT5G63990.1 | 39.782 | 367 | 192 | 7 | 6 | 372 | 3 | 340 | 1.72e-80 | 251 |
| Msa1286980 | AT5G64000.1 | 40.214 | 373 | 193 | 9 | 6 | 378 | 3 | 345 | 3.76e-75 | 237 |
| Msa1286980 | AT5G63990.2 | 37.736 | 318 | 171 | 5 | 6 | 323 | 3 | 293 | 1.57e-65 | 210 |
| Msa1286980 | AT5G64000.2 | 39.877 | 326 | 166 | 9 | 53 | 378 | 7 | 302 | 2.64e-63 | 205 |
| Msa1286980 | AT4G05090.1 | 30.105 | 382 | 214 | 13 | 5 | 369 | 45 | 390 | 1.22e-36 | 137 |
| Msa1286980 | AT4G05090.2 | 28.272 | 382 | 189 | 12 | 5 | 369 | 45 | 358 | 5.13e-30 | 119 |
Find 116 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTCTTCACTGGGTAAT+TGG | 0.149759 | 8_3:+35954095 | None:intergenic |
| GGATGATTCAACAGGCTTAC+TGG | 0.290137 | 8_3:-35954373 | Msa1286980:CDS |
| GATTCTCCTGTTACTGTTGC+AGG | 0.294670 | 8_3:-35957959 | Msa1286980:intron |
| TTCAAAGGGAACGTACTTAG+AGG | 0.300891 | 8_3:-35952025 | Msa1286980:CDS |
| GGTTACTATCGAAAACATTT+GGG | 0.313262 | 8_3:-35954446 | Msa1286980:CDS |
| AAAGTTGTTCTTGGAGTTCT+TGG | 0.314451 | 8_3:-35954123 | Msa1286980:CDS |
| GAGGATGGAAAAGTTGTTCT+TGG | 0.316763 | 8_3:-35954132 | Msa1286980:CDS |
| CGAATAGGCCTAGCACAATT+TGG | 0.328303 | 8_3:+35953916 | None:intergenic |
| TGGTTACTATCGAAAACATT+TGG | 0.329051 | 8_3:-35954447 | Msa1286980:CDS |
| AATCCCAATGTGCCGTCAAC+AGG | 0.339938 | 8_3:+35954195 | None:intergenic |
| TTGATGCTGTTTATGCTAGC+TGG | 0.345159 | 8_3:-35951948 | Msa1286980:CDS |
| GACCCTGTTGACGGCACATT+GGG | 0.370234 | 8_3:-35954198 | Msa1286980:CDS |
| TTCATGAAATTTGCAAAGTC+AGG | 0.372813 | 8_3:-35952144 | Msa1286980:CDS |
| ATTGGCCGCTGCAGCTCAAC+GGG | 0.373644 | 8_3:-35954249 | Msa1286980:CDS |
| TTTGAGTTTGCCCTTTCTAC+TGG | 0.375537 | 8_3:+35953850 | None:intergenic |
| TCTGTCTTCACTGGGTAATT+GGG | 0.382974 | 8_3:+35954096 | None:intergenic |
| CAGGTTACAAAGAAAAGATA+TGG | 0.389849 | 8_3:-35952125 | Msa1286980:CDS |
| ATATCGTTGTTTGATGATAC+TGG | 0.400328 | 8_3:+35954055 | None:intergenic |
| TTTAGCCATTCTGTCTTCAC+TGG | 0.404672 | 8_3:+35954087 | None:intergenic |
| ACTCTTGATGCATGCGGAAA+AGG | 0.410703 | 8_3:-35954018 | Msa1286980:CDS |
| TGCAAATTTCATGAATATCT+CGG | 0.414493 | 8_3:+35952152 | None:intergenic |
| AGTTTCTTCCATTGATGATC+CGG | 0.430345 | 8_3:-35953893 | Msa1286980:CDS |
| CAAGAGTTATGTCTGGACTT+TGG | 0.431295 | 8_3:+35954295 | None:intergenic |
| ACGGCACATTGGGATTTGTA+CGG | 0.436123 | 8_3:-35954188 | Msa1286980:CDS |
| CATTCTAACGTCCTATCTTC+AGG | 0.439215 | 8_3:+35953940 | None:intergenic |
| GCCCTTACGTGTCCACAGTA+TGG | 0.443252 | 8_3:-35952205 | Msa1286980:CDS |
| AAGTTGTTCTTGGAGTTCTT+GGG | 0.448569 | 8_3:-35954122 | Msa1286980:CDS |
| CGTTGAGCTGCAGCGGCCAA+TGG | 0.448822 | 8_3:+35954251 | None:intergenic |
| AGGTGCTAGTGGAAGGCATT+GGG | 0.449905 | 8_3:-35954226 | Msa1286980:CDS |
| GATGTTCCAAGAGTTATGTC+TGG | 0.451980 | 8_3:+35954288 | None:intergenic |
| TTCACCAAGGATGATTCAAC+AGG | 0.452198 | 8_3:-35954381 | Msa1286980:CDS |
| AACAGGAGAATCATCATCCT+TGG | 0.461732 | 8_3:+35957970 | None:intergenic |
| CGGCACATTGGGATTTGTAC+GGG | 0.465953 | 8_3:-35954187 | Msa1286980:CDS |
| TGGGACTCCTCAAATTTATG+AGG | 0.466477 | 8_3:-35951928 | Msa1286980:exon |
| CAAAGTCCAGACATAACTCT+TGG | 0.467323 | 8_3:-35954294 | Msa1286980:CDS |
| TTCCATTGATGATCCGGCAT+TGG | 0.472242 | 8_3:-35953887 | Msa1286980:CDS |
| CATTGGCCGCTGCAGCTCAA+CGG | 0.472445 | 8_3:-35954250 | Msa1286980:CDS |
| TGGGTACTTGACCCTGTTGA+CGG | 0.474366 | 8_3:-35954207 | Msa1286980:CDS |
| GGTGGTGTGGTAACCGATGC+CGG | 0.477095 | 8_3:-35952066 | Msa1286980:CDS |
| CTCTATGCGAACCAGTAGAA+AGG | 0.478562 | 8_3:-35953861 | Msa1286980:CDS |
| AGTCGTTGATTCCTGAAGAT+AGG | 0.478934 | 8_3:-35953951 | Msa1286980:CDS |
| TGCTCTGTGTGGGAGGGTGC+AGG | 0.482761 | 8_3:-35958020 | Msa1286980:CDS |
| TAGAGGTCGGCCTCCGGCAT+CGG | 0.486133 | 8_3:+35952053 | None:intergenic |
| AGGCTTACTGGAAGCTGTTG+TGG | 0.490527 | 8_3:-35954361 | Msa1286980:CDS |
| TACCATACTGTGGACACGTA+AGG | 0.492151 | 8_3:+35952203 | None:intergenic |
| TGATGCTGTTTATGCTAGCT+GGG | 0.492410 | 8_3:-35951947 | Msa1286980:CDS |
| TGCCAATGCCGGATCATCAA+TGG | 0.493482 | 8_3:+35953885 | None:intergenic |
| TGCGACTGAGGTTGTTTCCA+AGG | 0.494061 | 8_3:-35957987 | Msa1286980:CDS |
| TCAGAAGTTCTCGCGGCCAT+TGG | 0.498717 | 8_3:-35954267 | Msa1286980:CDS |
| GTGAGCAAGGCCAGCTGTGA+AGG | 0.502989 | 8_3:+35953822 | None:intergenic |
| GAGGTGCTAGTGGAAGGCAT+TGG | 0.506229 | 8_3:-35954227 | Msa1286980:CDS |
| TCAATGGAAGAAACTCGAAT+AGG | 0.507481 | 8_3:+35953901 | None:intergenic |
| TAAAATATGCAGCAATAGCA+AGG | 0.514707 | 8_3:-35952182 | Msa1286980:CDS |
| TTTGCGTCTTGGCTACGTGA+TGG | 0.517115 | 8_3:-35958101 | Msa1286980:exon |
| GCTCTAGCTTTGATTGAGGA+TGG | 0.519160 | 8_3:-35954147 | Msa1286980:CDS |
| CAAGGCCAGCTGTGAAGGAA+TGG | 0.524890 | 8_3:+35953827 | None:intergenic |
| GTGTTCAAGCAATCACTAGT+TGG | 0.526250 | 8_3:-35954467 | Msa1286980:CDS |
| TCAAACCATTCCTTCACAGC+TGG | 0.535193 | 8_3:-35953832 | Msa1286980:CDS |
| ACGTGGCATGTGCTCTGTGT+GGG | 0.537331 | 8_3:-35958030 | Msa1286980:CDS |
| GGCCGCTGCAGCTCAACGGG+AGG | 0.542625 | 8_3:-35954246 | Msa1286980:CDS |
| AAAGTCTAGAGGTCGGCCTC+CGG | 0.545768 | 8_3:+35952047 | None:intergenic |
| CGAGGCATAATTGCATGCTC+TGG | 0.546827 | 8_3:-35951994 | Msa1286980:CDS |
| TCAAAGGGAACGTACTTAGA+GGG | 0.547056 | 8_3:-35952024 | Msa1286980:CDS |
| TGACCCTGTTGACGGCACAT+TGG | 0.552603 | 8_3:-35954199 | Msa1286980:CDS |
| TCGCATAGAGTTGCCAATGC+CGG | 0.553182 | 8_3:+35953874 | None:intergenic |
| TCTATGCGAACCAGTAGAAA+GGG | 0.553675 | 8_3:-35953860 | Msa1286980:CDS |
| CACCTCCCGTTGAGCTGCAG+CGG | 0.555384 | 8_3:+35954244 | None:intergenic |
| TTGCTCACAGTGTAGGACTA+AGG | 0.556338 | 8_3:-35953807 | Msa1286980:intron |
| CGGTGTTGTGATTGTTGAAG+AGG | 0.559759 | 8_3:-35952091 | Msa1286980:CDS |
| TAAGCCTGTTGAATCATCCT+TGG | 0.561506 | 8_3:+35954377 | None:intergenic |
| AGCTCAACGGGAGGTGCTAG+TGG | 0.561690 | 8_3:-35954237 | Msa1286980:CDS |
| CAACGGGAGGTGCTAGTGGA+AGG | 0.562576 | 8_3:-35954233 | Msa1286980:CDS |
| TGGCATGTGCTCTGTGTGGG+AGG | 0.564800 | 8_3:-35958027 | Msa1286980:CDS |
| CTGAAGATAGGACGTTAGAA+TGG | 0.566383 | 8_3:-35953939 | Msa1286980:CDS |
| TCAGAATGTGTCAATTGTTG+CGG | 0.566580 | 8_3:-35954421 | Msa1286980:CDS |
| AGGTTACAAAGAAAAGATAT+GGG | 0.567323 | 8_3:-35952124 | Msa1286980:CDS |
| GGCATGTGCTCTGTGTGGGA+GGG | 0.570415 | 8_3:-35958026 | Msa1286980:CDS |
| ACCATACTGTGGACACGTAA+GGG | 0.576030 | 8_3:+35952204 | None:intergenic |
| ATTACCCAGTGAAGACAGAA+TGG | 0.576246 | 8_3:-35954092 | Msa1286980:CDS |
| TAGAATGGCCAAATTGTGCT+AGG | 0.579511 | 8_3:-35953924 | Msa1286980:CDS |
| GGAGAAGCTCCTTGCGACTG+AGG | 0.582374 | 8_3:-35957999 | Msa1286980:CDS |
| CGTCTTGGCTACGTGATGGA+GGG | 0.582948 | 8_3:-35958097 | Msa1286980:exon |
| GCGTCTTGGCTACGTGATGG+AGG | 0.584581 | 8_3:-35958098 | Msa1286980:exon |
| AAAATATGCAGCAATAGCAA+GGG | 0.586362 | 8_3:-35952181 | Msa1286980:CDS |
| TGGACTTTGGAGACCATACA+TGG | 0.586518 | 8_3:+35954308 | None:intergenic |
| TTAGCCATTCTGTCTTCACT+GGG | 0.592184 | 8_3:+35954088 | None:intergenic |
| AAGATATGGGATCATGCTGC+CGG | 0.592595 | 8_3:-35952111 | Msa1286980:CDS |
| GCTGGCCTTGCTCACAGTGT+AGG | 0.593474 | 8_3:-35953814 | Msa1286980:CDS |
| CACGTGGCATGTGCTCTGTG+TGG | 0.596078 | 8_3:-35958031 | Msa1286980:CDS |
| GGTTGCTCTAGCTTTGATTG+AGG | 0.597081 | 8_3:-35954151 | Msa1286980:CDS |
| TTAGTCCTACACTGTGAGCA+AGG | 0.600437 | 8_3:+35953809 | None:intergenic |
| GTTGTGATTGTTGAAGAGGC+CGG | 0.603344 | 8_3:-35952087 | Msa1286980:CDS |
| TGGAAACAACCTCAGTCGCA+AGG | 0.604031 | 8_3:+35957990 | None:intergenic |
| CAGAGCATGCAATTATGCCT+CGG | 0.606208 | 8_3:+35951995 | None:intergenic |
| GTTACTATCGAAAACATTTG+GGG | 0.610069 | 8_3:-35954445 | Msa1286980:CDS |
| CTCTTCAACAATCACAACAC+CGG | 0.618190 | 8_3:+35952092 | None:intergenic |
| TTGTATGCAAAGAGAGGCAG+TGG | 0.622560 | 8_3:-35953988 | Msa1286980:CDS |
| GGCACATTGGGATTTGTACG+GGG | 0.624183 | 8_3:-35954186 | Msa1286980:CDS |
| ATCCCAATGTGCCGTCAACA+GGG | 0.626643 | 8_3:+35954196 | None:intergenic |
| AGAGAGGCAGTGGTGAGGCG+TGG | 0.628860 | 8_3:-35953978 | Msa1286980:CDS |
| TGTTGAAGAGGCCGGTGGTG+TGG | 0.638056 | 8_3:-35952079 | Msa1286980:CDS |
| CCTTTGAAAAGTCTAGAGGT+CGG | 0.639579 | 8_3:+35952040 | None:intergenic |
| GGCATCGGTTACCACACCAC+CGG | 0.647173 | 8_3:+35952068 | None:intergenic |
| GTTCCCTTTGAAAAGTCTAG+AGG | 0.652497 | 8_3:+35952036 | None:intergenic |
| AGCTGTGAGGATTGTCCACG+TGG | 0.653121 | 8_3:-35958047 | Msa1286980:CDS |
| TGCAAAGAGAGGCAGTGGTG+AGG | 0.660835 | 8_3:-35953983 | Msa1286980:CDS |
| TCAACAACTCTTGATGCATG+CGG | 0.662013 | 8_3:-35954024 | Msa1286980:CDS |
| TGGAACATCAGAAGTTCTCG+CGG | 0.662297 | 8_3:-35954274 | Msa1286980:CDS |
| AAATATGCAGCAATAGCAAG+GGG | 0.662974 | 8_3:-35952180 | Msa1286980:CDS |
| CACACAGAGCACATGCCACG+TGG | 0.669994 | 8_3:+35958032 | None:intergenic |
| TACTTAGAGGGTCTTGACCG+AGG | 0.675960 | 8_3:-35952012 | Msa1286980:CDS |
| GTGATTGTTGAAGAGGCCGG+TGG | 0.685575 | 8_3:-35952084 | Msa1286980:CDS |
| GGTGTGGTAACCGATGCCGG+AGG | 0.697260 | 8_3:-35952063 | Msa1286980:CDS |
| GAGAATTAGAGATAGCTGTG+AGG | 0.704747 | 8_3:-35958060 | Msa1286980:CDS |
| AGATGTAGAAACTTTCACCA+AGG | 0.717876 | 8_3:-35954394 | Msa1286980:CDS |
| TGTGTGTTGTATGCAAAGAG+AGG | 0.730469 | 8_3:-35953994 | Msa1286980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATTGAATGATAAAA+TGG | - | chr8_3:35953803-35953822 | Msa1286980:intron | 10.0% |
| !! | ATATTATTGAATGATAAAAT+GGG | - | chr8_3:35953804-35953823 | Msa1286980:intron | 10.0% |
| !!! | TTTGATTTTTTTTTTTTTTG+AGG | - | chr8_3:35954758-35954777 | Msa1286980:intron | 10.0% |
| !!! | TTGATTTTTTTTTTTTTTGA+GGG | - | chr8_3:35954759-35954778 | Msa1286980:intron | 10.0% |
| !!! | TCAATCTTAATCTTTATTTA+TGG | - | chr8_3:35952008-35952027 | Msa1286980:CDS | 15.0% |
| !! | TAACAAAGATAAAAAATAGA+TGG | + | chr8_3:35953077-35953096 | None:intergenic | 15.0% |
| !! | TATTATTGAATGATAAAATG+GGG | - | chr8_3:35953805-35953824 | Msa1286980:intron | 15.0% |
| !! | AAAATTCAAATTATGTCAAT+GGG | + | chr8_3:35954167-35954186 | None:intergenic | 15.0% |
| !! | AAAAATTCAAATTATGTCAA+TGG | + | chr8_3:35954168-35954187 | None:intergenic | 15.0% |
| !! | AAAATTTATTAAGATGACAA+TGG | - | chr8_3:35954954-35954973 | Msa1286980:intron | 15.0% |
| !!! | AATTATTGGTTTTATCTTTA+AGG | - | chr8_3:35955122-35955141 | Msa1286980:intron | 15.0% |
| !!! | TACTAGATATTTTTGTTTTT+CGG | - | chr8_3:35955385-35955404 | Msa1286980:intron | 15.0% |
| !!! | TGTTTTTTATTTTTTTATGG+TGG | - | chr8_3:35956894-35956913 | Msa1286980:intron | 15.0% |
| !!! | TTTTTTTCATAGAAAATTCA+AGG | + | chr8_3:35957248-35957267 | None:intergenic | 15.0% |
| !!! | AATAAACTTAGATTATGTTT+TGG | + | chr8_3:35957616-35957635 | None:intergenic | 15.0% |
| !!! | TAATTTTTCAGTATAATCAT+TGG | - | chr8_3:35958072-35958091 | Msa1286980:CDS | 15.0% |
| !!! | CATAATTTGTTTTCGTTTAT+TGG | - | chr8_3:35952043-35952062 | Msa1286980:CDS | 20.0% |
| !!! | TGGAATAATTTCAAGTTTTA+AGG | - | chr8_3:35952454-35952473 | Msa1286980:intron | 20.0% |
| !!! | GGAATAATTTCAAGTTTTAA+GGG | - | chr8_3:35952455-35952474 | Msa1286980:intron | 20.0% |
| !! | CTTAGATAGTTAGAATTAAA+AGG | + | chr8_3:35952554-35952573 | None:intergenic | 20.0% |
| !! | ACACAAGATTGATTATTATA+GGG | + | chr8_3:35952795-35952814 | None:intergenic | 20.0% |
| !! | AACACAAGATTGATTATTAT+AGG | + | chr8_3:35952796-35952815 | None:intergenic | 20.0% |
| !!! | TTCTTCAAAATTGAGATTTT+AGG | + | chr8_3:35952823-35952842 | None:intergenic | 20.0% |
| !! | ATCAATCTAGTTAAGTATTA+TGG | - | chr8_3:35952878-35952897 | Msa1286980:intron | 20.0% |
| !!! | TGATTTATGTGTAACTTTTA+CGG | + | chr8_3:35953689-35953708 | None:intergenic | 20.0% |
| !! | GGGAATATTATGTTATAAAA+GGG | + | chr8_3:35953981-35954000 | None:intergenic | 20.0% |
| !! | AGGGAATATTATGTTATAAA+AGG | + | chr8_3:35953982-35954001 | None:intergenic | 20.0% |
| !! | ATCATAAAATTCATTCAAGA+AGG | - | chr8_3:35954270-35954289 | Msa1286980:CDS | 20.0% |
| !!! | TTGTGTTATTTTAGATAGAA+AGG | - | chr8_3:35954320-35954339 | Msa1286980:CDS | 20.0% |
| !! | TAAGATCTACATTATTGTAT+AGG | - | chr8_3:35954381-35954400 | Msa1286980:CDS | 20.0% |
| !! | TAAATCAAAATACTTCTCAA+CGG | + | chr8_3:35954688-35954707 | None:intergenic | 20.0% |
| !!! | GAGAAGTATTTTGATTTAAA+TGG | - | chr8_3:35954690-35954709 | Msa1286980:intron | 20.0% |
| !!! | AAGTCTTTTCTCATTAAATA+AGG | + | chr8_3:35954811-35954830 | None:intergenic | 20.0% |
| !! | TTATTTAATGAGAAAAGACT+TGG | - | chr8_3:35954810-35954829 | Msa1286980:intron | 20.0% |
| !! | TATTTAATGAGAAAAGACTT+GGG | - | chr8_3:35954811-35954830 | Msa1286980:intron | 20.0% |
| !! | ATGTACCAATTACATATAAA+AGG | - | chr8_3:35954881-35954900 | Msa1286980:intron | 20.0% |
| !! | TGTACCAATTACATATAAAA+GGG | - | chr8_3:35954882-35954901 | Msa1286980:intron | 20.0% |
| !!! | TCACTTTTATTGAGTATATA+TGG | - | chr8_3:35955189-35955208 | Msa1286980:intron | 20.0% |
| !!! | TATATGGTTTTGTTTACAAA+AGG | - | chr8_3:35956696-35956715 | Msa1286980:intron | 20.0% |
| !! | TTTACAAAAGGAAAATCTAA+GGG | - | chr8_3:35956708-35956727 | Msa1286980:intron | 20.0% |
| !!! | TTTTATTTTTTTATGGTGGT+CGG | - | chr8_3:35956898-35956917 | Msa1286980:intron | 20.0% |
| !! | TATGTATAATTTCAGTTGTA+CGG | + | chr8_3:35957369-35957388 | None:intergenic | 20.0% |
| !! | TTAATTATTGTACTTTCGAT+AGG | - | chr8_3:35957414-35957433 | Msa1286980:intron | 20.0% |
| ! | GATAGTTAGAATTAAAAGGA+AGG | + | chr8_3:35952550-35952569 | None:intergenic | 25.0% |
| ! | ACTTTACAAAATGCTTATGA+CGG | + | chr8_3:35952668-35952687 | None:intergenic | 25.0% |
| ! | CACAAGATTGATTATTATAG+GGG | + | chr8_3:35952794-35952813 | None:intergenic | 25.0% |
| !!! | AATCTCAATTTTGAAGAAGT+TGG | - | chr8_3:35952825-35952844 | Msa1286980:intron | 25.0% |
| !! | ATAGTGTGATACATTCATTT+TGG | - | chr8_3:35953001-35953020 | Msa1286980:intron | 25.0% |
| !! | TAGTGTGATACATTCATTTT+GGG | - | chr8_3:35953002-35953021 | Msa1286980:intron | 25.0% |
| !! | TCTTATGGACTTACTATTTT+TGG | + | chr8_3:35953132-35953151 | None:intergenic | 25.0% |
| ! | ATCTACAAATGAAGTAGTTA+TGG | + | chr8_3:35953217-35953236 | None:intergenic | 25.0% |
| ! | TCTTAAAAGCTTAAGCTATT+AGG | - | chr8_3:35953269-35953288 | Msa1286980:intron | 25.0% |
| ! | ATTAGGATAATGCATATGTA+TGG | - | chr8_3:35953286-35953305 | Msa1286980:intron | 25.0% |
| ! | TTAGGATAATGCATATGTAT+GGG | - | chr8_3:35953287-35953306 | Msa1286980:intron | 25.0% |
| ! | TACAATCTGTAATTGTGAAA+TGG | - | chr8_3:35953386-35953405 | Msa1286980:intron | 25.0% |
| !! | GTTCGTTATCTTGATTTTAT+GGG | + | chr8_3:35953781-35953800 | None:intergenic | 25.0% |
| !! | AGTTCGTTATCTTGATTTTA+TGG | + | chr8_3:35953782-35953801 | None:intergenic | 25.0% |
| ! | CATAATATTCCCTAAAATCA+AGG | - | chr8_3:35953989-35954008 | Msa1286980:CDS | 25.0% |
| ! | TAGAAGATTGTAGAAACATA+GGG | + | chr8_3:35954037-35954056 | None:intergenic | 25.0% |
| ! | TTCATGATGCAATTAATTGT+AGG | - | chr8_3:35954101-35954120 | Msa1286980:CDS | 25.0% |
| ! | TGTCATATGGTTAAATGTAT+TGG | - | chr8_3:35954206-35954225 | Msa1286980:CDS | 25.0% |
| ! | GTCATATGGTTAAATGTATT+GGG | - | chr8_3:35954207-35954226 | Msa1286980:CDS | 25.0% |
| ! | TAAAATTCATTCAAGAAGGA+TGG | - | chr8_3:35954274-35954293 | Msa1286980:CDS | 25.0% |
| ! | TATTGTATAGGATTAACTGT+TGG | - | chr8_3:35954393-35954412 | Msa1286980:CDS | 25.0% |
| ! | TAATAGATGAGTTATACACT+AGG | - | chr8_3:35954470-35954489 | Msa1286980:CDS | 25.0% |
| ! | AACACCTATGATAGAAAATA+TGG | - | chr8_3:35954532-35954551 | Msa1286980:intron | 25.0% |
| !!! | TTCATTTTGCTGTTAGAATT+TGG | - | chr8_3:35954912-35954931 | Msa1286980:intron | 25.0% |
| ! | TGATGTTCAGTAACTAATAA+TGG | + | chr8_3:35955076-35955095 | None:intergenic | 25.0% |
| ! | TGAAATACTAAAAACACTAC+AGG | + | chr8_3:35955172-35955191 | None:intergenic | 25.0% |
| ! | AAAAAAGGTTAAGAAATCGA+AGG | + | chr8_3:35955260-35955279 | None:intergenic | 25.0% |
| ! | ACATTTATAAGCGAGAAAAA+AGG | + | chr8_3:35955275-35955294 | None:intergenic | 25.0% |
| ! | GAAACTAGTGATATTAGAAA+TGG | - | chr8_3:35955300-35955319 | Msa1286980:intron | 25.0% |
| !!! | ATGTAATTTTAGAAAGTCAG+GGG | + | chr8_3:35956463-35956482 | None:intergenic | 25.0% |
| !!! | CATGTAATTTTAGAAAGTCA+GGG | + | chr8_3:35956464-35956483 | None:intergenic | 25.0% |
| !!! | ACATGTAATTTTAGAAAGTC+AGG | + | chr8_3:35956465-35956484 | None:intergenic | 25.0% |
| ! | GTTTACAAAAGGAAAATCTA+AGG | - | chr8_3:35956707-35956726 | Msa1286980:intron | 25.0% |
| ! | TTTACTTCAAACCCAAAATA+AGG | + | chr8_3:35956740-35956759 | None:intergenic | 25.0% |
| !!! | ATTTTGGGTTTGAAGTAAAA+AGG | - | chr8_3:35956741-35956760 | Msa1286980:intron | 25.0% |
| !!! | TCATGATTATCCATTTTGAT+CGG | + | chr8_3:35956858-35956877 | None:intergenic | 25.0% |
| !!! | TTTATTTTTTTATGGTGGTC+GGG | - | chr8_3:35956899-35956918 | Msa1286980:intron | 25.0% |
| ! | ATGCATAATATATGTAAGGT+CGG | + | chr8_3:35956934-35956953 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATGTA+AGG | + | chr8_3:35956938-35956957 | None:intergenic | 25.0% |
| ! | CATATTACAAGAATTGAGTT+TGG | - | chr8_3:35957068-35957087 | Msa1286980:intron | 25.0% |
| !!! | TCTCCTTTTAAAAACATTGA+CGG | + | chr8_3:35957147-35957166 | None:intergenic | 25.0% |
| ! | AATTTCAGAGAATACAGATT+AGG | + | chr8_3:35957575-35957594 | None:intergenic | 25.0% |
| ! | TGCAAATTTCATGAATATCT+CGG | + | chr8_3:35957785-35957804 | None:intergenic | 25.0% |
| ! | AGGTTACAAAGAAAAGATAT+GGG | - | chr8_3:35957810-35957829 | Msa1286980:intron | 25.0% |
| ! | AAAAAAGCCTCATAAATTTG+AGG | + | chr8_3:35958016-35958035 | None:intergenic | 25.0% |
| !! | TTGTTTTCGTTTATTGGTTG+TGG | - | chr8_3:35952049-35952068 | Msa1286980:CDS | 30.0% |
| !! | TGTTTTCGTTTATTGGTTGT+GGG | - | chr8_3:35952050-35952069 | Msa1286980:CDS | 30.0% |
| ACATATGAATCTGATCCATA+AGG | + | chr8_3:35952134-35952153 | None:intergenic | 30.0% | |
| TTAAATCCATAGTAGAATCC+AGG | + | chr8_3:35952265-35952284 | None:intergenic | 30.0% | |
| TCACAAGTGTTTATGTTAGT+AGG | - | chr8_3:35952358-35952377 | Msa1286980:intron | 30.0% | |
| CGTGAATGATTCTCTAATAT+GGG | + | chr8_3:35952412-35952431 | None:intergenic | 30.0% | |
| ACGTGAATGATTCTCTAATA+TGG | + | chr8_3:35952413-35952432 | None:intergenic | 30.0% | |
| ! | TTGCAAATCTCTTTTGCTTT+TGG | - | chr8_3:35952434-35952453 | Msa1286980:intron | 30.0% |
| TATAAGTATCCAATCTAGTG+AGG | - | chr8_3:35952522-35952541 | Msa1286980:intron | 30.0% | |
| CTTTACAAAATGCTTATGAC+GGG | + | chr8_3:35952667-35952686 | None:intergenic | 30.0% | |
| ATTGATTATTATAGGGGCTT+GGG | + | chr8_3:35952788-35952807 | None:intergenic | 30.0% | |
| ! | AATCAGCTGAAGTCTAAAAT+TGG | - | chr8_3:35952932-35952951 | Msa1286980:intron | 30.0% |
| ! | ATCAGCTGAAGTCTAAAATT+GGG | - | chr8_3:35952933-35952952 | Msa1286980:intron | 30.0% |
| ! | AGTGTGATACATTCATTTTG+GGG | - | chr8_3:35953003-35953022 | Msa1286980:intron | 30.0% |
| CAAACCAATGTCGAATATTA+TGG | + | chr8_3:35953029-35953048 | None:intergenic | 30.0% | |
| ! | CATAATATTCGACATTGGTT+TGG | - | chr8_3:35953027-35953046 | Msa1286980:intron | 30.0% |
| ! | ATTTTGTCAAAGATCCCTTT+TGG | - | chr8_3:35953171-35953190 | Msa1286980:intron | 30.0% |
| AATCTGTAATTGTGAAATGG+TGG | - | chr8_3:35953389-35953408 | Msa1286980:intron | 30.0% | |
| CAAGAAATGCATCATATAGA+CGG | + | chr8_3:35953463-35953482 | None:intergenic | 30.0% | |
| !!! | CCTTGACCTTATTTTAAAAC+CGG | - | chr8_3:35953501-35953520 | Msa1286980:intron | 30.0% |
| ! | TGGCATATCCAACATTTTAA+TGG | - | chr8_3:35953573-35953592 | Msa1286980:intron | 30.0% |
| !! | TATCCAACATTTTAATGGAC+AGG | - | chr8_3:35953578-35953597 | Msa1286980:intron | 30.0% |
| TTTCCTGTCCATTAAAATGT+TGG | + | chr8_3:35953584-35953603 | None:intergenic | 30.0% | |
| ATGTTATAAAAGGGAGTGAA+GGG | + | chr8_3:35953972-35953991 | None:intergenic | 30.0% | |
| TATGTTATAAAAGGGAGTGA+AGG | + | chr8_3:35953973-35953992 | None:intergenic | 30.0% | |
| ! | TAGCACTTTCCTTGATTTTA+GGG | + | chr8_3:35954001-35954020 | None:intergenic | 30.0% |
| ! | TTAGCACTTTCCTTGATTTT+AGG | + | chr8_3:35954002-35954021 | None:intergenic | 30.0% |
| CTAGAAGATTGTAGAAACAT+AGG | + | chr8_3:35954038-35954057 | None:intergenic | 30.0% | |
| ACAGTACAAAAACTGTCATA+TGG | - | chr8_3:35954193-35954212 | Msa1286980:CDS | 30.0% | |
| CTATTACAACTGTTTCATCT+GGG | + | chr8_3:35954456-35954475 | None:intergenic | 30.0% | |
| TCTATTACAACTGTTTCATC+TGG | + | chr8_3:35954457-35954476 | None:intergenic | 30.0% | |
| CCTATGATAGAAAATATGGA+CGG | - | chr8_3:35954536-35954555 | Msa1286980:intron | 30.0% | |
| TTTGGTCTATCATCTATACT+GGG | + | chr8_3:35954605-35954624 | None:intergenic | 30.0% | |
| ATTTGGTCTATCATCTATAC+TGG | + | chr8_3:35954606-35954625 | None:intergenic | 30.0% | |
| ATAGATGATAGACCAAATAG+AGG | - | chr8_3:35954608-35954627 | Msa1286980:intron | 30.0% | |
| TCATTAGACTATCCTCTATT+TGG | + | chr8_3:35954623-35954642 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTGAGGGAAGAG+CGG | - | chr8_3:35954767-35954786 | Msa1286980:intron | 30.0% |
| ! | GCTACCCTTTTATATGTAAT+TGG | + | chr8_3:35954889-35954908 | None:intergenic | 30.0% |
| TTGGTATGATAACTTTGCAA+AGG | - | chr8_3:35954931-35954950 | Msa1286980:intron | 30.0% | |
| !! | GTGTCTTTTCTTACTTTTCA+TGG | - | chr8_3:35955013-35955032 | Msa1286980:intron | 30.0% |
| ! | ATGGTAACAATGTCTCTTTT+TGG | - | chr8_3:35955046-35955065 | Msa1286980:intron | 30.0% |
| !! | CTTTAAGGTCAATATGAAAC+TGG | - | chr8_3:35955137-35955156 | Msa1286980:intron | 30.0% |
| TTCTCGCTTATAAATGTGAA+TGG | - | chr8_3:35955278-35955297 | Msa1286980:intron | 30.0% | |
| TGGTTACTATCGAAAACATT+TGG | - | chr8_3:35955487-35955506 | Msa1286980:intron | 30.0% | |
| GGTTACTATCGAAAACATTT+GGG | - | chr8_3:35955488-35955507 | Msa1286980:intron | 30.0% | |
| GTTACTATCGAAAACATTTG+GGG | - | chr8_3:35955489-35955508 | Msa1286980:intron | 30.0% | |
| ! | ATATCGTTGTTTGATGATAC+TGG | + | chr8_3:35955882-35955901 | None:intergenic | 30.0% |
| ATCAAGATAATTAGCAATGC+AGG | - | chr8_3:35956228-35956247 | Msa1286980:intron | 30.0% | |
| !! | AGTGTCTTGTTTGAAGATTA+AGG | - | chr8_3:35956268-35956287 | Msa1286980:intron | 30.0% |
| TACGCAGTTATATCAATAAG+TGG | + | chr8_3:35956311-35956330 | None:intergenic | 30.0% | |
| !! | TGTAATTTTAGAAAGTCAGG+GGG | + | chr8_3:35956462-35956481 | None:intergenic | 30.0% |
| !! | ACTTTTCTTCGTTCACTTTT+AGG | - | chr8_3:35956640-35956659 | Msa1286980:intron | 30.0% |
| !!! | TTATTTTTTTATGGTGGTCG+GGG | - | chr8_3:35956900-35956919 | Msa1286980:intron | 30.0% |
| TGCATAATATATGTAAGGTC+GGG | + | chr8_3:35956933-35956952 | None:intergenic | 30.0% | |
| TATGCATTGTCCATACTAAT+TGG | - | chr8_3:35956947-35956966 | Msa1286980:intron | 30.0% | |
| ATGCATTGTCCATACTAATT+GGG | - | chr8_3:35956948-35956967 | Msa1286980:intron | 30.0% | |
| TAAGCTTAACCCAATTAGTA+TGG | + | chr8_3:35956960-35956979 | None:intergenic | 30.0% | |
| TTACAAGAATTGAGTTTGGT+AGG | - | chr8_3:35957072-35957091 | Msa1286980:intron | 30.0% | |
| ! | GTAAAAACACGGTTATGTTT+TGG | - | chr8_3:35957094-35957113 | Msa1286980:intron | 30.0% |
| !! | TCCTTTTAAAAACATTGACG+GGG | + | chr8_3:35957145-35957164 | None:intergenic | 30.0% |
| !! | CTCCTTTTAAAAACATTGAC+GGG | + | chr8_3:35957146-35957165 | None:intergenic | 30.0% |
| ATAGAAAATTCAAGGTCCAA+AGG | + | chr8_3:35957240-35957259 | None:intergenic | 30.0% | |
| TACTTTCGATAGGAACAATA+TGG | - | chr8_3:35957424-35957443 | Msa1286980:intron | 30.0% | |
| TTTGGAAGATAGTGTAAACA+AGG | + | chr8_3:35957598-35957617 | None:intergenic | 30.0% | |
| ! | AATTCCAACAATGGTGTTAA+AGG | + | chr8_3:35957671-35957690 | None:intergenic | 30.0% |
| TAAAATATGCAGCAATAGCA+AGG | - | chr8_3:35957752-35957771 | Msa1286980:intron | 30.0% | |
| AAAATATGCAGCAATAGCAA+GGG | - | chr8_3:35957753-35957772 | Msa1286980:intron | 30.0% | |
| TTCATGAAATTTGCAAAGTC+AGG | - | chr8_3:35957790-35957809 | Msa1286980:intron | 30.0% | |
| CAGGTTACAAAGAAAAGATA+TGG | - | chr8_3:35957809-35957828 | Msa1286980:intron | 30.0% | |
| AAAAAACCTGCAACAGTAAC+AGG | + | chr8_3:35951984-35952003 | None:intergenic | 35.0% | |
| CAAAATGTGCTATAGCCTAT+AGG | - | chr8_3:35952098-35952117 | Msa1286980:CDS | 35.0% | |
| TATGAATCTGATCCATAAGG+CGG | + | chr8_3:35952131-35952150 | None:intergenic | 35.0% | |
| TGGATCAGATTCATATGTGA+TGG | - | chr8_3:35952136-35952155 | Msa1286980:CDS | 35.0% | |
| GGATCAGATTCATATGTGAT+GGG | - | chr8_3:35952137-35952156 | Msa1286980:CDS | 35.0% | |
| GAAAGGAAATAGCAAAATCC+TGG | - | chr8_3:35952244-35952263 | Msa1286980:intron | 35.0% | |
| CAAAATCCTGGATTCTACTA+TGG | - | chr8_3:35952256-35952275 | Msa1286980:intron | 35.0% | |
| CTATGGATTTAAGTCGTTGA+AGG | - | chr8_3:35952273-35952292 | Msa1286980:intron | 35.0% | |
| CGACTTAAATCCTAAAATCC+AGG | + | chr8_3:35952317-35952336 | None:intergenic | 35.0% | |
| !! | GACTTGTTAGAGATGTGATA+CGG | - | chr8_3:35952494-35952513 | Msa1286980:intron | 35.0% |
| !! | TTAATTAGCGCTGGTAGTAT+GGG | + | chr8_3:35952605-35952624 | None:intergenic | 35.0% |
| !! | ATTAATTAGCGCTGGTAGTA+TGG | + | chr8_3:35952606-35952625 | None:intergenic | 35.0% |
| ATACTACCAGCGCTAATTAA+TGG | - | chr8_3:35952605-35952624 | Msa1286980:intron | 35.0% | |
| ATATGCAGTCATGTAGATGA+AGG | + | chr8_3:35952733-35952752 | None:intergenic | 35.0% | |
| GATTGATTATTATAGGGGCT+TGG | + | chr8_3:35952789-35952808 | None:intergenic | 35.0% | |
| GCATTGCATGTGTATTCTTA+TGG | + | chr8_3:35953147-35953166 | None:intergenic | 35.0% | |
| GATCAATCTTCAGTCCAAAA+GGG | + | chr8_3:35953188-35953207 | None:intergenic | 35.0% | |
| TGATCAATCTTCAGTCCAAA+AGG | + | chr8_3:35953189-35953208 | None:intergenic | 35.0% | |
| !!! | CCGGTTTTAAAATAAGGTCA+AGG | + | chr8_3:35953504-35953523 | None:intergenic | 35.0% |
| !!! | CCAGTTCCGGTTTTAAAATA+AGG | + | chr8_3:35953510-35953529 | None:intergenic | 35.0% |
| !!! | CCTTATTTTAAAACCGGAAC+TGG | - | chr8_3:35953507-35953526 | Msa1286980:intron | 35.0% |
| GATGTTCTTATACCGACATA+AGG | - | chr8_3:35953542-35953561 | Msa1286980:intron | 35.0% | |
| ! | CAAGACAGGAGAATTCTTTT+GGG | + | chr8_3:35953717-35953736 | None:intergenic | 35.0% |
| !! | GAACCAAGCATTGAATTTGA+TGG | - | chr8_3:35953753-35953772 | Msa1286980:intron | 35.0% |
| GTTCCATCAAATTCAATGCT+TGG | + | chr8_3:35953759-35953778 | None:intergenic | 35.0% | |
| ATCTAGATACATTCAGCTAC+TGG | + | chr8_3:35954138-35954157 | None:intergenic | 35.0% | |
| GGTTCATCATGCAAAATAAC+AGG | - | chr8_3:35954228-35954247 | Msa1286980:CDS | 35.0% | |
| TGTTTCATCTGGGCAATATT+GGG | + | chr8_3:35954446-35954465 | None:intergenic | 35.0% | |
| AGATGAGTTATACACTAGGT+AGG | - | chr8_3:35954474-35954493 | Msa1286980:CDS | 35.0% | |
| GTTATACACTAGGTAGGAAA+AGG | - | chr8_3:35954480-35954499 | Msa1286980:intron | 35.0% | |
| AAAACACTAGAGAGAAAGTC+AGG | - | chr8_3:35954507-35954526 | Msa1286980:intron | 35.0% | |
| AAACACTAGAGAGAAAGTCA+GGG | - | chr8_3:35954508-35954527 | Msa1286980:intron | 35.0% | |
| ! | CCGTCCATATTTTCTATCAT+AGG | + | chr8_3:35954539-35954558 | None:intergenic | 35.0% |
| GAGGATAGTCTAATGATTAG+AGG | - | chr8_3:35954627-35954646 | Msa1286980:intron | 35.0% | |
| CAAAATACTTCTCAACGGTT+TGG | + | chr8_3:35954683-35954702 | None:intergenic | 35.0% | |
| TTCATGACAAGACATTAGAG+CGG | - | chr8_3:35954730-35954749 | Msa1286980:intron | 35.0% | |
| AGCGGTTTCATTTGATTAAC+AGG | - | chr8_3:35954785-35954804 | Msa1286980:intron | 35.0% | |
| ! | TGGTTTGTAATTTCCTCTCT+TGG | - | chr8_3:35954974-35954993 | Msa1286980:intron | 35.0% |
| GAGACATTGTTACCATGAAT+GGG | + | chr8_3:35955042-35955061 | None:intergenic | 35.0% | |
| AGAGACATTGTTACCATGAA+TGG | + | chr8_3:35955043-35955062 | None:intergenic | 35.0% | |
| ACCTCGATACTCTCAATTAT+TGG | - | chr8_3:35955108-35955127 | Msa1286980:intron | 35.0% | |
| !! | ACCAATAATTGAGAGTATCG+AGG | + | chr8_3:35955112-35955131 | None:intergenic | 35.0% |
| TCAGAATGTGTCAATTGTTG+CGG | - | chr8_3:35955513-35955532 | Msa1286980:intron | 35.0% | |
| AGATGTAGAAACTTTCACCA+AGG | - | chr8_3:35955540-35955559 | Msa1286980:intron | 35.0% | |
| !! | TTAGCTTTTGCATCCATGTA+TGG | - | chr8_3:35955613-35955632 | Msa1286980:intron | 35.0% |
| TCAATGGAAGAAACTCGAAT+AGG | + | chr8_3:35956036-35956055 | None:intergenic | 35.0% | |
| ! | AGTTTCTTCCATTGATGATC+CGG | - | chr8_3:35956041-35956060 | Msa1286980:intron | 35.0% |
| TACAGTTGCAGAACAATTGA+CGG | + | chr8_3:35956176-35956195 | None:intergenic | 35.0% | |
| TGCAAAGTTAAAATGTCAGG+TGG | + | chr8_3:35956515-35956534 | None:intergenic | 35.0% | |
| AGGTGCAAAGTTAAAATGTC+AGG | + | chr8_3:35956518-35956537 | None:intergenic | 35.0% | |
| !! | AACAAAGTATTGAGTTGGTG+AGG | + | chr8_3:35956538-35956557 | None:intergenic | 35.0% |
| !! | TAAGGGCAGAATCCTTATTT+TGG | - | chr8_3:35956725-35956744 | Msa1286980:intron | 35.0% |
| !!! | AAGGGCAGAATCCTTATTTT+GGG | - | chr8_3:35956726-35956745 | Msa1286980:intron | 35.0% |
| CAGTTTGCAGTTTAGCATAA+TGG | + | chr8_3:35956776-35956795 | None:intergenic | 35.0% | |
| TTTACTCCAACCGATCAAAA+TGG | - | chr8_3:35956845-35956864 | Msa1286980:intron | 35.0% | |
| !! | GATTATCCATTTTGATCGGT+TGG | + | chr8_3:35956854-35956873 | None:intergenic | 35.0% |
| GAGTTTGGTAGGTAAAAACA+CGG | - | chr8_3:35957083-35957102 | Msa1286980:intron | 35.0% | |
| !! | AACACGGTTATGTTTTGGAT+TGG | - | chr8_3:35957099-35957118 | Msa1286980:intron | 35.0% |
| ATGCTCTAATACAAAGGTAG+AGG | + | chr8_3:35957214-35957233 | None:intergenic | 35.0% | |
| AGGATGATGCTCTAATACAA+AGG | + | chr8_3:35957220-35957239 | None:intergenic | 35.0% | |
| ! | TGTATTAGAGCATCATCCTT+TGG | - | chr8_3:35957221-35957240 | Msa1286980:intron | 35.0% |
| CTTTCATATCTACTGGACAT+AGG | - | chr8_3:35957479-35957498 | Msa1286980:intron | 35.0% | |
| CATAGGAAGCTATGAAAGAT+AGG | - | chr8_3:35957496-35957515 | Msa1286980:intron | 35.0% | |
| AAAGATAGGAATCATAGACC+AGG | - | chr8_3:35957510-35957529 | Msa1286980:intron | 35.0% | |
| AGATTACAATTGCCTAGCAA+AGG | + | chr8_3:35957542-35957561 | None:intergenic | 35.0% | |
| TCTTCCTTTAACACCATTGT+TGG | - | chr8_3:35957664-35957683 | Msa1286980:intron | 35.0% | |
| GAGCATTTCAATTCCAACAA+TGG | + | chr8_3:35957680-35957699 | None:intergenic | 35.0% | |
| ! | CTGCATATTTTACCATACTG+TGG | + | chr8_3:35957744-35957763 | None:intergenic | 35.0% |
| AAATATGCAGCAATAGCAAG+GGG | - | chr8_3:35957754-35957773 | Msa1286980:intron | 35.0% | |
| GAGAATTAGAGATAGCTGTG+AGG | - | chr8_3:35951874-35951893 | Msa1286980:three_prime_UTR | 40.0% | |
| AACAGGAGAATCATCATCCT+TGG | + | chr8_3:35951967-35951986 | None:intergenic | 40.0% | |
| ! | CAACCTTGGTGACAATGTTT+GGG | + | chr8_3:35952199-35952218 | None:intergenic | 40.0% |
| ! | ACAACCTTGGTGACAATGTT+TGG | + | chr8_3:35952200-35952219 | None:intergenic | 40.0% |
| GTCACCAAGGTTGTCAAAAT+CGG | - | chr8_3:35952206-35952225 | Msa1286980:CDS | 40.0% | |
| TCACCAAGGTTGTCAAAATC+GGG | - | chr8_3:35952207-35952226 | Msa1286980:CDS | 40.0% | |
| TCAAAATCGGGACTTACTTC+AGG | - | chr8_3:35952219-35952238 | Msa1286980:intron | 40.0% | |
| TGAAGAAAGTCGCAAAATCC+TGG | - | chr8_3:35952296-35952315 | Msa1286980:intron | 40.0% | |
| ! | GTCGCAAAATCCTGGATTTT+AGG | - | chr8_3:35952304-35952323 | Msa1286980:intron | 40.0% |
| TAAGGGCTATATAGCATGAG+AGG | - | chr8_3:35952472-35952491 | Msa1286980:intron | 40.0% | |
| CTAATTAATGGCAGCCATGA+TGG | - | chr8_3:35952617-35952636 | Msa1286980:intron | 40.0% | |
| ACCATAATGGCATGTCTGTA+TGG | - | chr8_3:35952698-35952717 | Msa1286980:intron | 40.0% | |
| ACCATACAGACATGCCATTA+TGG | + | chr8_3:35952702-35952721 | None:intergenic | 40.0% | |
| ATAATGGCATGTCTGTATGG+TGG | - | chr8_3:35952701-35952720 | Msa1286980:intron | 40.0% | |
| TAATGGCATGTCTGTATGGT+GGG | - | chr8_3:35952702-35952721 | Msa1286980:intron | 40.0% | |
| TGACTGCATATCACTCAATG+TGG | - | chr8_3:35952742-35952761 | Msa1286980:intron | 40.0% | |
| GACTGCATATCACTCAATGT+GGG | - | chr8_3:35952743-35952762 | Msa1286980:intron | 40.0% | |
| ACTGCATATCACTCAATGTG+GGG | - | chr8_3:35952744-35952763 | Msa1286980:intron | 40.0% | |
| TTATAGGGGCTTGGGTATAA+TGG | + | chr8_3:35952780-35952799 | None:intergenic | 40.0% | |
| TACAGATGTAATGTACCTGC+AGG | - | chr8_3:35953348-35953367 | Msa1286980:intron | 40.0% | |
| TAACTAGTGATATCACCTGC+AGG | + | chr8_3:35953366-35953385 | None:intergenic | 40.0% | |
| GTGTACGGTTATAGTAGTTG+TGG | + | chr8_3:35953441-35953460 | None:intergenic | 40.0% | |
| TGCATCATATAGACGGTGTA+CGG | + | chr8_3:35953456-35953475 | None:intergenic | 40.0% | |
| TGATGCATTTCTTGCATCAC+AGG | - | chr8_3:35953469-35953488 | Msa1286980:intron | 40.0% | |
| CATATATCTCTCACCAGTTC+CGG | + | chr8_3:35953523-35953542 | None:intergenic | 40.0% | |
| ! | CCAAGACAGGAGAATTCTTT+TGG | + | chr8_3:35953718-35953737 | None:intergenic | 40.0% |
| CCAAAAGAATTCTCCTGTCT+TGG | - | chr8_3:35953715-35953734 | Msa1286980:intron | 40.0% | |
| ACACAGAAATCATCCAAGAC+AGG | + | chr8_3:35953731-35953750 | None:intergenic | 40.0% | |
| GTCTTGGATGATTTCTGTGT+TGG | - | chr8_3:35953731-35953750 | Msa1286980:intron | 40.0% | |
| !! | GCTTTAGAGCTCTACAATGA+TGG | - | chr8_3:35953829-35953848 | Msa1286980:CDS | 40.0% |
| AAGAGAGTTTCTCTCTGCTT+AGG | + | chr8_3:35953911-35953930 | None:intergenic | 40.0% | |
| GCTGAATGTATCTAGATGCT+TGG | - | chr8_3:35954141-35954160 | Msa1286980:CDS | 40.0% | |
| TAACAGGTAGATAGAGAGAG+AGG | - | chr8_3:35954244-35954263 | Msa1286980:CDS | 40.0% | |
| CAAGAAGGATGGAATAGAAG+TGG | - | chr8_3:35954285-35954304 | Msa1286980:CDS | 40.0% | |
| CTGTTTCATCTGGGCAATAT+TGG | + | chr8_3:35954447-35954466 | None:intergenic | 40.0% | |
| GAGGTAGAGAGATAGACTAA+TGG | - | chr8_3:35954646-35954665 | Msa1286980:intron | 40.0% | |
| AAGACAACAACATCCAAGAG+AGG | + | chr8_3:35954990-35955009 | None:intergenic | 40.0% | |
| ! | TTTTCATGGTCTCCCATTCA+TGG | - | chr8_3:35955027-35955046 | Msa1286980:intron | 40.0% |
| CTTCCTTAGCAATGTCTCTA+TGG | - | chr8_3:35955362-35955381 | Msa1286980:intron | 40.0% | |
| GTACCATAGAGACATTGCTA+AGG | + | chr8_3:35955368-35955387 | None:intergenic | 40.0% | |
| GTGTTCAAGCAATCACTAGT+TGG | - | chr8_3:35955467-35955486 | Msa1286980:intron | 40.0% | |
| TTCACCAAGGATGATTCAAC+AGG | - | chr8_3:35955553-35955572 | Msa1286980:intron | 40.0% | |
| TAAGCCTGTTGAATCATCCT+TGG | + | chr8_3:35955560-35955579 | None:intergenic | 40.0% | |
| CAAGAGTTATGTCTGGACTT+TGG | + | chr8_3:35955642-35955661 | None:intergenic | 40.0% | |
| CAAAGTCCAGACATAACTCT+TGG | - | chr8_3:35955640-35955659 | Msa1286980:intron | 40.0% | |
| GATGTTCCAAGAGTTATGTC+TGG | + | chr8_3:35955649-35955668 | None:intergenic | 40.0% | |
| TCTGTCTTCACTGGGTAATT+GGG | + | chr8_3:35955841-35955860 | None:intergenic | 40.0% | |
| TTCTGTCTTCACTGGGTAAT+TGG | + | chr8_3:35955842-35955861 | None:intergenic | 40.0% | |
| ATTACCCAGTGAAGACAGAA+TGG | - | chr8_3:35955842-35955861 | Msa1286980:intron | 40.0% | |
| TTAGCCATTCTGTCTTCACT+GGG | + | chr8_3:35955849-35955868 | None:intergenic | 40.0% | |
| TTTAGCCATTCTGTCTTCAC+TGG | + | chr8_3:35955850-35955869 | None:intergenic | 40.0% | |
| TCAACAACTCTTGATGCATG+CGG | - | chr8_3:35955910-35955929 | Msa1286980:intron | 40.0% | |
| TGTGTGTTGTATGCAAAGAG+AGG | - | chr8_3:35955940-35955959 | Msa1286980:intron | 40.0% | |
| !! | AGTCGTTGATTCCTGAAGAT+AGG | - | chr8_3:35955983-35956002 | Msa1286980:intron | 40.0% |
| CATTCTAACGTCCTATCTTC+AGG | + | chr8_3:35955997-35956016 | None:intergenic | 40.0% | |
| CTGAAGATAGGACGTTAGAA+TGG | - | chr8_3:35955995-35956014 | Msa1286980:intron | 40.0% | |
| TAGAATGGCCAAATTGTGCT+AGG | - | chr8_3:35956010-35956029 | Msa1286980:intron | 40.0% | |
| TCTATGCGAACCAGTAGAAA+GGG | - | chr8_3:35956074-35956093 | Msa1286980:intron | 40.0% | |
| ! | TTTGAGTTTGCCCTTTCTAC+TGG | + | chr8_3:35956087-35956106 | None:intergenic | 40.0% |
| ACAGTTGCAGAACAATTGAC+GGG | + | chr8_3:35956175-35956194 | None:intergenic | 40.0% | |
| AAGTGTTCATGTTAGCAGAC+AGG | - | chr8_3:35956400-35956419 | Msa1286980:intron | 40.0% | |
| AGTGTTCATGTTAGCAGACA+GGG | - | chr8_3:35956401-35956420 | Msa1286980:intron | 40.0% | |
| !! | GGTGCAACAAAGTATTGAGT+TGG | + | chr8_3:35956543-35956562 | None:intergenic | 40.0% |
| AGTTTCTTGCATGAAGCAAG+CGG | + | chr8_3:35956564-35956583 | None:intergenic | 40.0% | |
| ! | CTTGATTTGATGAGAGCTAC+TGG | + | chr8_3:35956589-35956608 | None:intergenic | 40.0% |
| !! | GCCCCGTCAATGTTTTTAAA+AGG | - | chr8_3:35957141-35957160 | Msa1286980:intron | 40.0% |
| TTGAGCTTATCTGCTAACAG+TGG | + | chr8_3:35957306-35957325 | None:intergenic | 40.0% | |
| AAGACCCGAGGTAACAAATA+GGG | - | chr8_3:35957342-35957361 | Msa1286980:intron | 40.0% | |
| TACAATTGCCTAGCAAAGGA+AGG | + | chr8_3:35957538-35957557 | None:intergenic | 40.0% | |
| TGCTCTACACTCTCAAAATC+TGG | - | chr8_3:35957695-35957714 | Msa1286980:intron | 40.0% | |
| CTCTTCAACAATCACAACAC+CGG | + | chr8_3:35957845-35957864 | None:intergenic | 40.0% | |
| ! | CCTTTGAAAAGTCTAGAGGT+CGG | + | chr8_3:35957897-35957916 | None:intergenic | 40.0% |
| ! | CGACCTCTAGACTTTTCAAA+GGG | - | chr8_3:35957895-35957914 | Msa1286980:intron | 40.0% |
| ! | GTTCCCTTTGAAAAGTCTAG+AGG | + | chr8_3:35957901-35957920 | None:intergenic | 40.0% |
| TTCAAAGGGAACGTACTTAG+AGG | - | chr8_3:35957909-35957928 | Msa1286980:intron | 40.0% | |
| TCAAAGGGAACGTACTTAGA+GGG | - | chr8_3:35957910-35957929 | Msa1286980:intron | 40.0% | |
| ! | TTGATGCTGTTTATGCTAGC+TGG | - | chr8_3:35957986-35958005 | Msa1286980:CDS | 40.0% |
| ! | TGATGCTGTTTATGCTAGCT+GGG | - | chr8_3:35957987-35958006 | Msa1286980:CDS | 40.0% |
| TGGGACTCCTCAAATTTATG+AGG | - | chr8_3:35958006-35958025 | Msa1286980:CDS | 40.0% | |
| GATTCTCCTGTTACTGTTGC+AGG | - | chr8_3:35951975-35951994 | Msa1286980:CDS | 45.0% | |
| TAAGGCGGTGCATTACCTAT+AGG | + | chr8_3:35952116-35952135 | None:intergenic | 45.0% | |
| ATAGGTAATGCACCGCCTTA+TGG | - | chr8_3:35952116-35952135 | Msa1286980:CDS | 45.0% | |
| GATCCCAAACATTGTCACCA+AGG | - | chr8_3:35952193-35952212 | Msa1286980:CDS | 45.0% | |
| !! | AGTCCCGATTTTGACAACCT+TGG | + | chr8_3:35952213-35952232 | None:intergenic | 45.0% |
| AGGAAGGATCCTCACTAGAT+TGG | + | chr8_3:35952534-35952553 | None:intergenic | 45.0% | |
| ! | TAATGGCAGCCATGATGGAA+TGG | - | chr8_3:35952622-35952641 | Msa1286980:intron | 45.0% |
| AGTGACGATGCAGACCATAA+TGG | - | chr8_3:35952685-35952704 | Msa1286980:intron | 45.0% | |
| ATATCACTCAATGTGGGGCT+TGG | - | chr8_3:35952749-35952768 | Msa1286980:intron | 45.0% | |
| TATCACTCAATGTGGGGCTT+GGG | - | chr8_3:35952750-35952769 | Msa1286980:intron | 45.0% | |
| GGGGCCATAATATTCGACAT+TGG | - | chr8_3:35953022-35953041 | Msa1286980:intron | 45.0% | |
| ACCGACATAAGGATTCAGCT+TGG | - | chr8_3:35953553-35953572 | Msa1286980:intron | 45.0% | |
| GCCAAGCTGAATCCTTATGT+CGG | + | chr8_3:35953557-35953576 | None:intergenic | 45.0% | |
| CAGTCCAGCTGGATAACTAT+GGG | + | chr8_3:35953623-35953642 | None:intergenic | 45.0% | |
| ! | TTATCCAGCTGGACTGGAAT+AGG | - | chr8_3:35953627-35953646 | Msa1286980:intron | 45.0% |
| ATTTCCTATTCCAGTCCAGC+TGG | + | chr8_3:35953634-35953653 | None:intergenic | 45.0% | |
| ATGCCCAAACAAACCAAGAC+GGG | + | chr8_3:35954563-35954582 | None:intergenic | 45.0% | |
| CATGCCCAAACAAACCAAGA+CGG | + | chr8_3:35954564-35954583 | None:intergenic | 45.0% | |
| !! | TTGGTTTGTTTGGGCATGTG+TGG | - | chr8_3:35954566-35954585 | Msa1286980:intron | 45.0% |
| ACCATCACAGACAGTTGTAC+TGG | - | chr8_3:35954850-35954869 | Msa1286980:intron | 45.0% | |
| ACCAGTACAACTGTCTGTGA+TGG | + | chr8_3:35954854-35954873 | None:intergenic | 45.0% | |
| GGATGATTCAACAGGCTTAC+TGG | - | chr8_3:35955561-35955580 | Msa1286980:intron | 45.0% | |
| ! | TGGACTTTGGAGACCATACA+TGG | + | chr8_3:35955629-35955648 | None:intergenic | 45.0% |
| TGGAACATCAGAAGTTCTCG+CGG | - | chr8_3:35955660-35955679 | Msa1286980:intron | 45.0% | |
| ACGGCACATTGGGATTTGTA+CGG | - | chr8_3:35955746-35955765 | Msa1286980:intron | 45.0% | |
| !! | GGTTGCTCTAGCTTTGATTG+AGG | - | chr8_3:35955783-35955802 | Msa1286980:intron | 45.0% |
| !! | GCTCTAGCTTTGATTGAGGA+TGG | - | chr8_3:35955787-35955806 | Msa1286980:intron | 45.0% |
| ACTCTTGATGCATGCGGAAA+AGG | - | chr8_3:35955916-35955935 | Msa1286980:intron | 45.0% | |
| TTGTATGCAAAGAGAGGCAG+TGG | - | chr8_3:35955946-35955965 | Msa1286980:intron | 45.0% | |
| CGAATAGGCCTAGCACAATT+TGG | + | chr8_3:35956021-35956040 | None:intergenic | 45.0% | |
| ! | TTCCATTGATGATCCGGCAT+TGG | - | chr8_3:35956047-35956066 | Msa1286980:intron | 45.0% |
| CTCTATGCGAACCAGTAGAA+AGG | - | chr8_3:35956073-35956092 | Msa1286980:intron | 45.0% | |
| TCAAACCATTCCTTCACAGC+TGG | - | chr8_3:35956102-35956121 | Msa1286980:intron | 45.0% | |
| TTAGTCCTACACTGTGAGCA+AGG | + | chr8_3:35956128-35956147 | None:intergenic | 45.0% | |
| TTGCTCACAGTGTAGGACTA+AGG | - | chr8_3:35956127-35956146 | Msa1286980:intron | 45.0% | |
| GTGTTCATGTTAGCAGACAG+GGG | - | chr8_3:35956402-35956421 | Msa1286980:intron | 45.0% | |
| CAGGTGGTTCATAGTGTGAA+AGG | + | chr8_3:35956499-35956518 | None:intergenic | 45.0% | |
| !!! | ACCTCGGGTCTTGTTTTGAT+AGG | + | chr8_3:35957334-35957353 | None:intergenic | 45.0% |
| CAAGACCCGAGGTAACAAAT+AGG | - | chr8_3:35957341-35957360 | Msa1286980:intron | 45.0% | |
| ! | ACGGACCCTATTTGTTACCT+CGG | + | chr8_3:35957350-35957369 | None:intergenic | 45.0% |
| GGGACGACTTTCATATCTAC+TGG | - | chr8_3:35957472-35957491 | Msa1286980:intron | 45.0% | |
| ACCATACTGTGGACACGTAA+GGG | + | chr8_3:35957733-35957752 | None:intergenic | 45.0% | |
| TACCATACTGTGGACACGTA+AGG | + | chr8_3:35957734-35957753 | None:intergenic | 45.0% | |
| AAGATATGGGATCATGCTGC+CGG | - | chr8_3:35957823-35957842 | Msa1286980:intron | 45.0% | |
| !! | CGGTGTTGTGATTGTTGAAG+AGG | - | chr8_3:35957843-35957862 | Msa1286980:intron | 45.0% |
| GTTGTGATTGTTGAAGAGGC+CGG | - | chr8_3:35957847-35957866 | Msa1286980:intron | 45.0% | |
| ! | CCGACCTCTAGACTTTTCAA+AGG | - | chr8_3:35957894-35957913 | Msa1286980:intron | 45.0% |
| CAGAGCATGCAATTATGCCT+CGG | + | chr8_3:35957942-35957961 | None:intergenic | 45.0% | |
| !!! | TAATTTTTACTTTTTATATA+TGG | - | chr8_3:35956680-35956699 | Msa1286980:intron | 5.0% |
| !!! | ATATGTTTTTTATTTTTTTA+TGG | - | chr8_3:35956891-35956910 | Msa1286980:intron | 5.0% |
| !! | ATATAATATAATATAATTTC+AGG | - | chr8_3:35957388-35957407 | Msa1286980:intron | 5.0% |
| !!! | GTTTTTTTTTTTTTTTTTTA+GGG | + | chr8_3:35957451-35957470 | None:intergenic | 5.0% |
| !!! | AGTTTTTTTTTTTTTTTTTT+AGG | + | chr8_3:35957452-35957471 | None:intergenic | 5.0% |
| !! | TAAAAAAAAAAAAAAAAAAC+TGG | - | chr8_3:35957451-35957470 | Msa1286980:intron | 5.0% |
| !! | AAAAAAAAAAAAAAAAAACT+GGG | - | chr8_3:35957452-35957471 | Msa1286980:intron | 5.0% |
| TTTGCGTCTTGGCTACGTGA+TGG | - | chr8_3:35951833-35951852 | Msa1286980:three_prime_UTR | 50.0% | |
| TGGAAACAACCTCAGTCGCA+AGG | + | chr8_3:35951947-35951966 | None:intergenic | 50.0% | |
| ! | TGCGACTGAGGTTGTTTCCA+AGG | - | chr8_3:35951947-35951966 | Msa1286980:CDS | 50.0% |
| GGGACTTACTTCAGGTCGAA+AGG | - | chr8_3:35952227-35952246 | Msa1286980:intron | 50.0% | |
| !! | TTAGCGCTGGTAGTATGGGA+TGG | + | chr8_3:35952601-35952620 | None:intergenic | 50.0% |
| TGGCTGCCATTAATTAGCGC+TGG | + | chr8_3:35952614-35952633 | None:intergenic | 50.0% | |
| !! | GCATGTCTGTATGGTGGGTT+TGG | - | chr8_3:35952707-35952726 | Msa1286980:intron | 50.0% |
| TTCGCCCATAGTTATCCAGC+TGG | - | chr8_3:35953616-35953635 | Msa1286980:intron | 50.0% | |
| CCAGTCCAGCTGGATAACTA+TGG | + | chr8_3:35953624-35953643 | None:intergenic | 50.0% | |
| CCATAGTTATCCAGCTGGAC+TGG | - | chr8_3:35953621-35953640 | Msa1286980:intron | 50.0% | |
| !! | TGGTAGGAGTGTTCACACTC+TGG | + | chr8_3:35953876-35953895 | None:intergenic | 50.0% |
| !! | TAGGAGCATTGTGCTCTGGT+AGG | + | chr8_3:35953892-35953911 | None:intergenic | 50.0% |
| !! | TGCTTAGGAGCATTGTGCTC+TGG | + | chr8_3:35953896-35953915 | None:intergenic | 50.0% |
| AAATATGGACGGTCCCGTCT+TGG | - | chr8_3:35954547-35954566 | Msa1286980:intron | 50.0% | |
| !! | GGTCCCGTCTTGGTTTGTTT+GGG | - | chr8_3:35954557-35954576 | Msa1286980:intron | 50.0% |
| AGGCTTACTGGAAGCTGTTG+TGG | - | chr8_3:35955573-35955592 | Msa1286980:intron | 50.0% | |
| !! | AGGTGCTAGTGGAAGGCATT+GGG | - | chr8_3:35955708-35955727 | Msa1286980:intron | 50.0% |
| TGGGTACTTGACCCTGTTGA+CGG | - | chr8_3:35955727-35955746 | Msa1286980:intron | 50.0% | |
| ATCCCAATGTGCCGTCAACA+GGG | + | chr8_3:35955741-35955760 | None:intergenic | 50.0% | |
| AATCCCAATGTGCCGTCAAC+AGG | + | chr8_3:35955742-35955761 | None:intergenic | 50.0% | |
| CGGCACATTGGGATTTGTAC+GGG | - | chr8_3:35955747-35955766 | Msa1286980:intron | 50.0% | |
| GGCACATTGGGATTTGTACG+GGG | - | chr8_3:35955748-35955767 | Msa1286980:intron | 50.0% | |
| TGCCAATGCCGGATCATCAA+TGG | + | chr8_3:35956052-35956071 | None:intergenic | 50.0% | |
| TCGCATAGAGTTGCCAATGC+CGG | + | chr8_3:35956063-35956082 | None:intergenic | 50.0% | |
| TTCATGTTAGCAGACAGGGG+CGG | - | chr8_3:35956405-35956424 | Msa1286980:intron | 50.0% | |
| GCCTATCAAAACAAGACCCG+AGG | - | chr8_3:35957330-35957349 | Msa1286980:intron | 50.0% | |
| ! | CGGACCCTATTTGTTACCTC+GGG | + | chr8_3:35957349-35957368 | None:intergenic | 50.0% |
| TACTTAGAGGGTCTTGACCG+AGG | - | chr8_3:35957922-35957941 | Msa1286980:intron | 50.0% | |
| CGAGGCATAATTGCATGCTC+TGG | - | chr8_3:35957940-35957959 | Msa1286980:intron | 50.0% | |
| ! | CGTCTTGGCTACGTGATGGA+GGG | - | chr8_3:35951837-35951856 | Msa1286980:three_prime_UTR | 55.0% |
| AGCTGTGAGGATTGTCCACG+TGG | - | chr8_3:35951887-35951906 | Msa1286980:three_prime_UTR | 55.0% | |
| ACGTGGCATGTGCTCTGTGT+GGG | - | chr8_3:35951904-35951923 | Msa1286980:three_prime_UTR | 55.0% | |
| CGCTGGTAGTATGGGATGGT+CGG | + | chr8_3:35952597-35952616 | None:intergenic | 55.0% | |
| !! | CGGTCCCGTCTTGGTTTGTT+TGG | - | chr8_3:35954556-35954575 | Msa1286980:intron | 55.0% |
| TCAGAAGTTCTCGCGGCCAT+TGG | - | chr8_3:35955667-35955686 | Msa1286980:intron | 55.0% | |
| ! | GAGGTGCTAGTGGAAGGCAT+TGG | - | chr8_3:35955707-35955726 | Msa1286980:intron | 55.0% |
| TGACCCTGTTGACGGCACAT+TGG | - | chr8_3:35955735-35955754 | Msa1286980:intron | 55.0% | |
| GACCCTGTTGACGGCACATT+GGG | - | chr8_3:35955736-35955755 | Msa1286980:intron | 55.0% | |
| TGTACGGGGCGATCAGTATG+CGG | - | chr8_3:35955762-35955781 | Msa1286980:intron | 55.0% | |
| TGCAAAGAGAGGCAGTGGTG+AGG | - | chr8_3:35955951-35955970 | Msa1286980:intron | 55.0% | |
| CAAGGCCAGCTGTGAAGGAA+TGG | + | chr8_3:35956110-35956129 | None:intergenic | 55.0% | |
| GCGGAGCTACTCATGCTTGA+GGG | - | chr8_3:35956424-35956443 | Msa1286980:intron | 55.0% | |
| CGGAGCTACTCATGCTTGAG+GGG | - | chr8_3:35956425-35956444 | Msa1286980:intron | 55.0% | |
| GGAGCTACTCATGCTTGAGG+GGG | - | chr8_3:35956426-35956445 | Msa1286980:intron | 55.0% | |
| ACCAGGCACCTTCCTTTGCT+AGG | - | chr8_3:35957527-35957546 | Msa1286980:intron | 55.0% | |
| GCCCTTACGTGTCCACAGTA+TGG | - | chr8_3:35957729-35957748 | Msa1286980:intron | 55.0% | |
| GTGATTGTTGAAGAGGCCGG+TGG | - | chr8_3:35957850-35957869 | Msa1286980:intron | 55.0% | |
| AAAGTCTAGAGGTCGGCCTC+CGG | + | chr8_3:35957890-35957909 | None:intergenic | 55.0% | |
| GCGTCTTGGCTACGTGATGG+AGG | - | chr8_3:35951836-35951855 | Msa1286980:three_prime_UTR | 60.0% | |
| CACACAGAGCACATGCCACG+TGG | + | chr8_3:35951905-35951924 | None:intergenic | 60.0% | |
| CACGTGGCATGTGCTCTGTG+TGG | - | chr8_3:35951903-35951922 | Msa1286980:three_prime_UTR | 60.0% | |
| TGGCATGTGCTCTGTGTGGG+AGG | - | chr8_3:35951907-35951926 | Msa1286980:three_prime_UTR | 60.0% | |
| GGCATGTGCTCTGTGTGGGA+GGG | - | chr8_3:35951908-35951927 | Msa1286980:three_prime_UTR | 60.0% | |
| GGAGAAGCTCCTTGCGACTG+AGG | - | chr8_3:35951935-35951954 | Msa1286980:CDS | 60.0% | |
| ! | GCAGCCATGATGGAATGGCG+TGG | - | chr8_3:35952627-35952646 | Msa1286980:intron | 60.0% |
| ! | GCCATGATGGAATGGCGTGG+CGG | - | chr8_3:35952630-35952649 | Msa1286980:intron | 60.0% |
| ! | CCATGATGGAATGGCGTGGC+GGG | - | chr8_3:35952631-35952650 | Msa1286980:intron | 60.0% |
| CATTGGCCGCTGCAGCTCAA+CGG | - | chr8_3:35955684-35955703 | Msa1286980:intron | 60.0% | |
| ATTGGCCGCTGCAGCTCAAC+GGG | - | chr8_3:35955685-35955704 | Msa1286980:intron | 60.0% | |
| !! | AGCTCAACGGGAGGTGCTAG+TGG | - | chr8_3:35955697-35955716 | Msa1286980:intron | 60.0% |
| !! | CAACGGGAGGTGCTAGTGGA+AGG | - | chr8_3:35955701-35955720 | Msa1286980:intron | 60.0% |
| GTGAGCAAGGCCAGCTGTGA+AGG | + | chr8_3:35956115-35956134 | None:intergenic | 60.0% | |
| !! | GCTGGCCTTGCTCACAGTGT+AGG | - | chr8_3:35956120-35956139 | Msa1286980:intron | 60.0% |
| GGCGGAGCTACTCATGCTTG+AGG | - | chr8_3:35956423-35956442 | Msa1286980:intron | 60.0% | |
| AAACCTGCACCCCCTGCTTC+AGG | - | chr8_3:35957268-35957287 | Msa1286980:intron | 60.0% | |
| AACCTGCACCCCCTGCTTCA+GGG | - | chr8_3:35957269-35957288 | Msa1286980:intron | 60.0% | |
| TAGCCAGGACCCTGAAGCAG+GGG | + | chr8_3:35957281-35957300 | None:intergenic | 60.0% | |
| GTAGCCAGGACCCTGAAGCA+GGG | + | chr8_3:35957282-35957301 | None:intergenic | 60.0% | |
| CTGCTAACAGTGGCGTAGCC+AGG | + | chr8_3:35957296-35957315 | None:intergenic | 60.0% | |
| !! | GCCTAGCAAAGGAAGGTGCC+TGG | + | chr8_3:35957531-35957550 | None:intergenic | 60.0% |
| TGTTGAAGAGGCCGGTGGTG+TGG | - | chr8_3:35957855-35957874 | Msa1286980:intron | 60.0% | |
| !! | GGCATCGGTTACCACACCAC+CGG | + | chr8_3:35957869-35957888 | None:intergenic | 60.0% |
| GGTGGTGTGGTAACCGATGC+CGG | - | chr8_3:35957868-35957887 | Msa1286980:intron | 60.0% | |
| ! | TGCTCTGTGTGGGAGGGTGC+AGG | - | chr8_3:35951914-35951933 | Msa1286980:exon | 65.0% |
| CCCGCCACGCCATTCCATCA+TGG | + | chr8_3:35952634-35952653 | None:intergenic | 65.0% | |
| CGTTGAGCTGCAGCGGCCAA+TGG | + | chr8_3:35955686-35955705 | None:intergenic | 65.0% | |
| CACCTCCCGTTGAGCTGCAG+CGG | + | chr8_3:35955693-35955712 | None:intergenic | 65.0% | |
| AGAGAGGCAGTGGTGAGGCG+TGG | - | chr8_3:35955956-35955975 | Msa1286980:intron | 65.0% | |
| AGCCAGGACCCTGAAGCAGG+GGG | + | chr8_3:35957280-35957299 | None:intergenic | 65.0% | |
| CGTAGCCAGGACCCTGAAGC+AGG | + | chr8_3:35957283-35957302 | None:intergenic | 65.0% | |
| GGTGTGGTAACCGATGCCGG+AGG | - | chr8_3:35957871-35957890 | Msa1286980:intron | 65.0% | |
| TAGAGGTCGGCCTCCGGCAT+CGG | + | chr8_3:35957884-35957903 | None:intergenic | 65.0% | |
| ! | GACCCTGAAGCAGGGGGTGC+AGG | + | chr8_3:35957274-35957293 | None:intergenic | 70.0% |
| CACCCCCTGCTTCAGGGTCC+TGG | - | chr8_3:35957275-35957294 | Msa1286980:intron | 70.0% | |
| GGCCGCTGCAGCTCAACGGG+AGG | - | chr8_3:35955688-35955707 | Msa1286980:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 35951824 | 35958132 | 35951824 | ID=Msa1286980;Name=Msa1286980 |
| chr8_3 | mRNA | 35951824 | 35958132 | 35951824 | ID=Msa1286980-mRNA-1;Parent=Msa1286980;Name=Msa1286980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=28|1|1|1|1|1|3|106|378 |
| chr8_3 | exon | 35951824 | 35952233 | 35951824 | ID=Msa1286980-mRNA-1:exon:10576;Parent=Msa1286980-mRNA-1 |
| chr8_3 | exon | 35953808 | 35954495 | 35953808 | ID=Msa1286980-mRNA-1:exon:10575;Parent=Msa1286980-mRNA-1 |
| chr8_3 | exon | 35957960 | 35958132 | 35957960 | ID=Msa1286980-mRNA-1:exon:10574;Parent=Msa1286980-mRNA-1 |
| chr8_3 | five_prime_UTR | 35958105 | 35958132 | 35958105 | ID=Msa1286980-mRNA-1:five_prime_utr;Parent=Msa1286980-mRNA-1 |
| chr8_3 | CDS | 35957960 | 35958104 | 35957960 | ID=Msa1286980-mRNA-1:cds;Parent=Msa1286980-mRNA-1 |
| chr8_3 | CDS | 35953808 | 35954495 | 35953808 | ID=Msa1286980-mRNA-1:cds;Parent=Msa1286980-mRNA-1 |
| chr8_3 | CDS | 35951930 | 35952233 | 35951930 | ID=Msa1286980-mRNA-1:cds;Parent=Msa1286980-mRNA-1 |
| chr8_3 | three_prime_UTR | 35951824 | 35951929 | 35951824 | ID=Msa1286980-mRNA-1:three_prime_utr;Parent=Msa1286980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
