Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1226720 | XP_013445554.1 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1226720 | sp|Q38945|DPNPH_ARATH | 68.700 | 377 | 99 | 4 | 9 | 378 | 9 | 373 | 4.92e-180 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1226720 | A0A072U199 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 766 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa1226720 | 0.812968 | 3.245786e-51 | -8.615850e-47 |
| Msa0027260 | Msa1226720 | 0.808271 | 3.362450e-50 | -8.615850e-47 |
| Msa0029260 | Msa1226720 | 0.812977 | 3.231310e-51 | -8.615850e-47 |
| Msa0048180 | Msa1226720 | 0.825661 | 4.150549e-54 | -8.615850e-47 |
| Msa0092170 | Msa1226720 | 0.804862 | 1.762142e-49 | -8.615850e-47 |
| Msa0100800 | Msa1226720 | 0.814716 | 1.337396e-51 | -8.615850e-47 |
| Msa0610390 | Msa1226720 | 0.821414 | 4.089108e-53 | -8.615850e-47 |
| Msa0615580 | Msa1226720 | 0.827315 | 1.674722e-54 | -8.615850e-47 |
| Msa0615680 | Msa1226720 | 0.812642 | 3.826314e-51 | -8.615850e-47 |
| Msa0618930 | Msa1226720 | 0.808523 | 2.970706e-50 | -8.615850e-47 |
| Msa0650920 | Msa1226720 | 0.813320 | 2.717072e-51 | -8.615850e-47 |
| Msa0654870 | Msa1226720 | 0.808725 | 2.689194e-50 | -8.615850e-47 |
| Msa0662630 | Msa1226720 | 0.810167 | 1.318922e-50 | -8.615850e-47 |
| Msa0666230 | Msa1226720 | 0.836937 | 6.981765e-57 | -8.615850e-47 |
| Msa0669720 | Msa1226720 | 0.811129 | 8.170411e-51 | -8.615850e-47 |
| Msa0669760 | Msa1226720 | 0.808111 | 3.636833e-50 | -8.615850e-47 |
| Msa0694990 | Msa1226720 | 0.805476 | 1.310898e-49 | -8.615850e-47 |
| Msa0707390 | Msa1226720 | 0.810117 | 1.352103e-50 | -8.615850e-47 |
| Msa0751010 | Msa1226720 | 0.812410 | 4.300261e-51 | -8.615850e-47 |
| Msa0794050 | Msa1226720 | 0.830704 | 2.528363e-55 | -8.615850e-47 |
| Msa0800370 | Msa1226720 | 0.810487 | 1.124966e-50 | -8.615850e-47 |
| Msa0805500 | Msa1226720 | 0.806897 | 6.579544e-50 | -8.615850e-47 |
| Msa0818770 | Msa1226720 | 0.822084 | 2.862174e-53 | -8.615850e-47 |
| Msa0826500 | Msa1226720 | 0.812272 | 4.607988e-51 | -8.615850e-47 |
| Msa0121820 | Msa1226720 | 0.813339 | 2.691275e-51 | -8.615850e-47 |
| Msa0126880 | Msa1226720 | 0.812641 | 3.827295e-51 | -8.615850e-47 |
| Msa0127040 | Msa1226720 | 0.807066 | 6.059018e-50 | -8.615850e-47 |
| Msa0128860 | Msa1226720 | 0.806606 | 7.582235e-50 | -8.615850e-47 |
| Msa0166750 | Msa1226720 | 0.815550 | 8.728694e-52 | -8.615850e-47 |
| Msa0167480 | Msa1226720 | 0.832402 | 9.648796e-56 | -8.615850e-47 |
| Msa0169300 | Msa1226720 | 0.808558 | 2.919236e-50 | -8.615850e-47 |
| Msa0171410 | Msa1226720 | 0.803227 | 3.854377e-49 | -8.615850e-47 |
| Msa0174730 | Msa1226720 | 0.804496 | 2.100935e-49 | -8.615850e-47 |
| Msa0197530 | Msa1226720 | 0.826109 | 3.249398e-54 | -8.615850e-47 |
| Msa0231100 | Msa1226720 | 0.803676 | 3.111274e-49 | -8.615850e-47 |
| Msa1226720 | Msa1226750 | 0.907992 | 2.779361e-81 | -8.615850e-47 |
| Msa1226720 | Msa1253810 | 0.802729 | 4.886619e-49 | -8.615850e-47 |
| Msa1226720 | Msa1286970 | 0.856131 | 3.959035e-62 | -8.615850e-47 |
| Msa1226720 | Msa1286980 | 0.831110 | 2.010065e-55 | -8.615850e-47 |
| Msa1226720 | Msa1296830 | 0.804335 | 2.269845e-49 | -8.615850e-47 |
| Msa1226720 | Msa1303580 | 0.832260 | 1.046216e-55 | -8.615850e-47 |
| Msa1226720 | Msa1310690 | 0.810157 | 1.325341e-50 | -8.615850e-47 |
| Msa1226720 | Msa1331710 | 0.800841 | 1.192567e-48 | -8.615850e-47 |
| Msa1226720 | Msa1336560 | 0.807331 | 5.325104e-50 | -8.615850e-47 |
| Msa1226720 | Msa1349570 | 0.813838 | 2.090381e-51 | -8.615850e-47 |
| Msa1226720 | Msa1365860 | 0.805192 | 1.502873e-49 | -8.615850e-47 |
| Msa1226720 | Msa1379760 | 0.805724 | 1.162439e-49 | -8.615850e-47 |
| Msa1226720 | Msa1450280 | 0.805260 | 1.454567e-49 | -8.615850e-47 |
| Msa1226720 | Msa1454680 | 0.805197 | 1.499171e-49 | -8.615850e-47 |
| Msa0370160 | Msa1226720 | -0.822966 | 1.784757e-53 | -8.615850e-47 |
| Msa0384880 | Msa1226720 | 0.813107 | 3.025335e-51 | -8.615850e-47 |
| Msa0436200 | Msa1226720 | 0.842601 | 2.340404e-58 | -8.615850e-47 |
| Msa0437690 | Msa1226720 | -0.831456 | 1.652628e-55 | -8.615850e-47 |
| Msa0443390 | Msa1226720 | 0.835475 | 1.642636e-56 | -8.615850e-47 |
| Msa1019240 | Msa1226720 | 0.815441 | 9.228753e-52 | -8.615850e-47 |
| Msa1019260 | Msa1226720 | 0.825532 | 4.452132e-54 | -8.615850e-47 |
| Msa1070390 | Msa1226720 | 0.807062 | 6.072249e-50 | -8.615850e-47 |
| Msa1098720 | Msa1226720 | -0.806354 | 8.567565e-50 | -8.615850e-47 |
| Msa1104210 | Msa1226720 | 0.815960 | 7.072625e-52 | -8.615850e-47 |
| Msa0262480 | Msa1226720 | 0.858919 | 5.916890e-63 | -8.615850e-47 |
| Msa0296920 | Msa1226720 | 0.806621 | 7.526816e-50 | -8.615850e-47 |
| Msa0300350 | Msa1226720 | 0.846017 | 2.827945e-59 | -8.615850e-47 |
| Msa0304660 | Msa1226720 | 0.807221 | 5.620444e-50 | -8.615850e-47 |
| Msa0331700 | Msa1226720 | 0.802565 | 5.282461e-49 | -8.615850e-47 |
| Msa1120810 | Msa1226720 | 0.802237 | 6.171838e-49 | -8.615850e-47 |
| Msa1125790 | Msa1226720 | -0.804554 | 2.043042e-49 | -8.615850e-47 |
| Msa1126120 | Msa1226720 | -0.811134 | 8.149225e-51 | -8.615850e-47 |
| Msa1131560 | Msa1226720 | 0.805576 | 1.248851e-49 | -8.615850e-47 |
| Msa1138870 | Msa1226720 | 0.802375 | 5.779619e-49 | -8.615850e-47 |
| Msa1158230 | Msa1226720 | 0.800877 | 1.172892e-48 | -8.615850e-47 |
| Msa1165780 | Msa1226720 | 0.840104 | 1.063273e-57 | -8.615850e-47 |
| Msa1166870 | Msa1226720 | 0.851959 | 6.318506e-61 | -8.615850e-47 |
| Msa1173900 | Msa1226720 | 0.820693 | 5.994022e-53 | -8.615850e-47 |
| Msa1200320 | Msa1226720 | 0.807422 | 5.094187e-50 | -8.615850e-47 |
| Msa1201830 | Msa1226720 | 0.802124 | 6.511663e-49 | -8.615850e-47 |
| Msa1202580 | Msa1226720 | 0.806485 | 8.041718e-50 | -8.615850e-47 |
| Msa0509950 | Msa1226720 | -0.830670 | 2.576225e-55 | -8.615850e-47 |
| Msa0524590 | Msa1226720 | 0.836038 | 1.182595e-56 | -8.615850e-47 |
| Msa0561430 | Msa1226720 | 0.804684 | 1.919645e-49 | -8.615850e-47 |
| Msa0879850 | Msa1226720 | 0.842384 | 2.672790e-58 | -8.615850e-47 |
| Msa0905990 | Msa1226720 | 0.801264 | 9.774331e-49 | -8.615850e-47 |
| Msa0943170 | Msa1226720 | 0.805348 | 1.394367e-49 | -8.615850e-47 |
| Msa0947800 | Msa1226720 | 0.812578 | 3.951280e-51 | -8.615850e-47 |
| Msa0974810 | Msa1226720 | 0.805511 | 1.288770e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1226720 | MtrunA17_Chr8g0360681 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 766 |
| Msa1226720 | MtrunA17_Chr2g0281361 | 67.632 | 380 | 120 | 1 | 2 | 378 | 87 | 466 | 0.0 | 540 |
| Msa1226720 | MtrunA17_Chr4g0048001 | 57.937 | 378 | 153 | 2 | 2 | 378 | 78 | 450 | 2.52e-152 | 437 |
| Msa1226720 | MtrunA17_Chr4g0052431 | 42.330 | 352 | 175 | 7 | 23 | 374 | 90 | 413 | 1.17e-86 | 268 |
| Msa1226720 | MtrunA17_Chr2g0281081 | 32.494 | 397 | 203 | 17 | 2 | 369 | 45 | 405 | 2.78e-41 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1226720 | AT5G54390.1 | 68.700 | 377 | 99 | 4 | 9 | 378 | 9 | 373 | 0.0 | 507 |
| Msa1226720 | AT5G63980.1 | 44.044 | 361 | 172 | 6 | 6 | 366 | 3 | 333 | 4.14e-93 | 283 |
| Msa1226720 | AT5G09290.1 | 40.214 | 373 | 185 | 7 | 6 | 378 | 3 | 337 | 6.08e-84 | 259 |
| Msa1226720 | AT5G63990.1 | 39.782 | 367 | 192 | 7 | 6 | 372 | 3 | 340 | 2.08e-80 | 251 |
| Msa1226720 | AT5G64000.1 | 40.483 | 373 | 192 | 9 | 6 | 378 | 3 | 345 | 3.48e-75 | 237 |
| Msa1226720 | AT5G63990.2 | 37.736 | 318 | 171 | 5 | 6 | 323 | 3 | 293 | 1.71e-65 | 210 |
| Msa1226720 | AT5G64000.2 | 40.184 | 326 | 165 | 9 | 53 | 378 | 7 | 302 | 1.07e-63 | 206 |
| Msa1226720 | AT4G05090.1 | 30.366 | 382 | 213 | 13 | 5 | 369 | 45 | 390 | 7.41e-37 | 138 |
| Msa1226720 | AT4G05090.2 | 28.312 | 385 | 191 | 12 | 5 | 372 | 45 | 361 | 3.49e-30 | 119 |
Find 116 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGACTTCACTGGGTAAT+TGG | 0.114406 | 8_2:+1638095 | None:intergenic |
| GGATGATTCAACAGGCTTAC+TGG | 0.290137 | 8_2:-1638373 | Msa1226720:CDS |
| GATTCTCCTGTTACTGTTGC+AGG | 0.294670 | 8_2:-1641956 | Msa1226720:intron |
| TTCAAAGGGAACGTACTTAG+AGG | 0.300891 | 8_2:-1636952 | Msa1226720:CDS |
| GGTTACTATCGAAAACATTT+GGG | 0.313262 | 8_2:-1638446 | Msa1226720:CDS |
| AAAGTTGTTCTTGGAGTTCT+TGG | 0.314451 | 8_2:-1638123 | Msa1226720:CDS |
| GAGGATGGAAAAGTTGTTCT+TGG | 0.316763 | 8_2:-1638132 | Msa1226720:CDS |
| CGAATAGGCCTAGCACAATT+TGG | 0.328303 | 8_2:+1637916 | None:intergenic |
| TGGTTACTATCGAAAACATT+TGG | 0.329051 | 8_2:-1638447 | Msa1226720:CDS |
| AATCCCAATGTGCCGTCAAC+AGG | 0.339938 | 8_2:+1638195 | None:intergenic |
| TTGATGCTGTTTATGCTAGC+TGG | 0.345159 | 8_2:-1636875 | Msa1226720:CDS |
| GACCCTGTTGACGGCACATT+GGG | 0.370234 | 8_2:-1638198 | Msa1226720:CDS |
| TTCATGAAATTTGCAAAGTC+AGG | 0.372813 | 8_2:-1637071 | Msa1226720:CDS |
| ATTGGCCGCTGCAGCTCAAC+GGG | 0.373644 | 8_2:-1638249 | Msa1226720:CDS |
| TTTGAGTTTGCCCTTTCTAC+TGG | 0.375537 | 8_2:+1637850 | None:intergenic |
| CAGGTTACAAAGAAAAGATA+TGG | 0.389849 | 8_2:-1637052 | Msa1226720:CDS |
| CATTCTAATGTCCTATCTTC+AGG | 0.398532 | 8_2:+1637940 | None:intergenic |
| TCTGACTTCACTGGGTAATT+GGG | 0.398839 | 8_2:+1638096 | None:intergenic |
| ATATCGTTGTTTGATGATAC+TGG | 0.400328 | 8_2:+1638055 | None:intergenic |
| ACTCTTGATGCATGCGGAAA+AGG | 0.410703 | 8_2:-1638018 | Msa1226720:CDS |
| TGCAAATTTCATGAATATCT+CGG | 0.414493 | 8_2:+1637079 | None:intergenic |
| AGTTTCTTCTGTTGATGATC+CGG | 0.429160 | 8_2:-1637893 | Msa1226720:CDS |
| CAAGAGTTATGTCTGGACTT+TGG | 0.431295 | 8_2:+1638295 | None:intergenic |
| ACGGCACATTGGGATTTGTA+CGG | 0.436123 | 8_2:-1638188 | Msa1226720:CDS |
| TTTAGCCATTCTGACTTCAC+TGG | 0.439440 | 8_2:+1638087 | None:intergenic |
| GCCCTTACGTGTCCACAGTA+TGG | 0.443252 | 8_2:-1637132 | Msa1226720:CDS |
| TTCTGTTGATGATCCGGCAT+TGG | 0.445837 | 8_2:-1637887 | Msa1226720:CDS |
| AAGTTGTTCTTGGAGTTCTT+GGG | 0.448569 | 8_2:-1638122 | Msa1226720:CDS |
| CGTTGAGCTGCAGCGGCCAA+TGG | 0.448822 | 8_2:+1638251 | None:intergenic |
| AGGTGCTAGTGGAAGGCATT+GGG | 0.449905 | 8_2:-1638226 | Msa1226720:CDS |
| GATGTTCCAAGAGTTATGTC+TGG | 0.451980 | 8_2:+1638288 | None:intergenic |
| TTCACCAAGGATGATTCAAC+AGG | 0.452198 | 8_2:-1638381 | Msa1226720:CDS |
| AACAGGAGAATCATCATCCT+TGG | 0.461732 | 8_2:+1641967 | None:intergenic |
| CGGCACATTGGGATTTGTAC+GGG | 0.465953 | 8_2:-1638187 | Msa1226720:CDS |
| TGGGACTCCTCAAATTTATG+AGG | 0.466477 | 8_2:-1636855 | Msa1226720:exon |
| CAAAGTCCAGACATAACTCT+TGG | 0.467323 | 8_2:-1638294 | Msa1226720:CDS |
| CATTGGCCGCTGCAGCTCAA+CGG | 0.472445 | 8_2:-1638250 | Msa1226720:CDS |
| TGGGTACTTGACCCTGTTGA+CGG | 0.474366 | 8_2:-1638207 | Msa1226720:CDS |
| GGTGGTGTGGTAACCGATGC+CGG | 0.477095 | 8_2:-1636993 | Msa1226720:CDS |
| CTCTATGCGAACCAGTAGAA+AGG | 0.478562 | 8_2:-1637861 | Msa1226720:CDS |
| AGTCGTTGATTCCTGAAGAT+AGG | 0.478934 | 8_2:-1637951 | Msa1226720:CDS |
| TGCTCTGTGTGGGAGGGTGC+AGG | 0.482761 | 8_2:-1642017 | Msa1226720:CDS |
| TAGAGGTCGGCCTCCGGCAT+CGG | 0.486133 | 8_2:+1636980 | None:intergenic |
| TCAACAGAAGAAACTCGAAT+AGG | 0.492310 | 8_2:+1637901 | None:intergenic |
| TGATGCTGTTTATGCTAGCT+GGG | 0.492410 | 8_2:-1636874 | Msa1226720:CDS |
| TGCGACTGAGGTTGTTTCCA+AGG | 0.494061 | 8_2:-1641984 | Msa1226720:CDS |
| TCAGAAGTTCTCGCGGCCAT+TGG | 0.498717 | 8_2:-1638267 | Msa1226720:CDS |
| TACCATACTGTGGACACGTA+AGG | 0.499750 | 8_2:+1637130 | None:intergenic |
| GTGAGCAAGGCCAGCTGTGA+AGG | 0.502989 | 8_2:+1637822 | None:intergenic |
| GAGGTGCTAGTGGAAGGCAT+TGG | 0.506229 | 8_2:-1638227 | Msa1226720:CDS |
| TTTGCGTCTTGGCTACGTGA+TGG | 0.517115 | 8_2:-1642098 | Msa1226720:exon |
| GCTCTAGCTTTGATTGAGGA+TGG | 0.519160 | 8_2:-1638147 | Msa1226720:CDS |
| CAAGGCCAGCTGTGAAGGAA+TGG | 0.524890 | 8_2:+1637827 | None:intergenic |
| GTGTTCAAGCAATCACTAGT+TGG | 0.526250 | 8_2:-1638467 | Msa1226720:CDS |
| TCAAACCATTCCTTCACAGC+TGG | 0.535193 | 8_2:-1637832 | Msa1226720:CDS |
| ACGTGGCATGTGCTCTGTGT+GGG | 0.537331 | 8_2:-1642027 | Msa1226720:CDS |
| AGGCTTACTGGAAGCTGTCG+TGG | 0.537966 | 8_2:-1638361 | Msa1226720:CDS |
| GGCCGCTGCAGCTCAACGGG+AGG | 0.542625 | 8_2:-1638246 | Msa1226720:CDS |
| AAAGTCTAGAGGTCGGCCTC+CGG | 0.545768 | 8_2:+1636974 | None:intergenic |
| CGAGGCATAATTGCATGCTC+TGG | 0.546827 | 8_2:-1636921 | Msa1226720:CDS |
| TCAAAGGGAACGTACTTAGA+GGG | 0.547056 | 8_2:-1636951 | Msa1226720:CDS |
| TGACCCTGTTGACGGCACAT+TGG | 0.552603 | 8_2:-1638199 | Msa1226720:CDS |
| TCGCATAGAGTTGCCAATGC+CGG | 0.553182 | 8_2:+1637874 | None:intergenic |
| TCTATGCGAACCAGTAGAAA+GGG | 0.553675 | 8_2:-1637860 | Msa1226720:CDS |
| CACCTCCCGTTGAGCTGCAG+CGG | 0.555384 | 8_2:+1638244 | None:intergenic |
| TTGCTCACAGTGTAGGACTA+AGG | 0.556338 | 8_2:-1637807 | Msa1226720:intron |
| CGGTGTTGTGATTGTTGAAG+AGG | 0.559759 | 8_2:-1637018 | Msa1226720:CDS |
| TAAGCCTGTTGAATCATCCT+TGG | 0.561506 | 8_2:+1638377 | None:intergenic |
| AGCTCAACGGGAGGTGCTAG+TGG | 0.561690 | 8_2:-1638237 | Msa1226720:CDS |
| CAACGGGAGGTGCTAGTGGA+AGG | 0.562576 | 8_2:-1638233 | Msa1226720:CDS |
| TGGCATGTGCTCTGTGTGGG+AGG | 0.564800 | 8_2:-1642024 | Msa1226720:CDS |
| TTAGCCATTCTGACTTCACT+GGG | 0.565040 | 8_2:+1638088 | None:intergenic |
| TCAGAATGTGTCAATTGTTG+CGG | 0.566580 | 8_2:-1638421 | Msa1226720:CDS |
| AGGTTACAAAGAAAAGATAT+GGG | 0.567323 | 8_2:-1637051 | Msa1226720:CDS |
| GGCATGTGCTCTGTGTGGGA+GGG | 0.570415 | 8_2:-1642023 | Msa1226720:CDS |
| TAAAGTATGCAGCAATAGCA+AGG | 0.571197 | 8_2:-1637109 | Msa1226720:CDS |
| TAGAATGGCCAAATTGTGCT+AGG | 0.579511 | 8_2:-1637924 | Msa1226720:CDS |
| GGAGAAGCTCCTTGCGACTG+AGG | 0.582374 | 8_2:-1641996 | Msa1226720:CDS |
| ATTACCCAGTGAAGTCAGAA+TGG | 0.582785 | 8_2:-1638092 | Msa1226720:CDS |
| CGTCTTGGCTACGTGATGGA+GGG | 0.582948 | 8_2:-1642094 | Msa1226720:exon |
| GCGTCTTGGCTACGTGATGG+AGG | 0.584581 | 8_2:-1642095 | Msa1226720:exon |
| CTGAAGATAGGACATTAGAA+TGG | 0.584862 | 8_2:-1637939 | Msa1226720:CDS |
| TGGACTTTGGAGACCATACA+TGG | 0.586518 | 8_2:+1638308 | None:intergenic |
| AAGATATGGGATCATGCTGC+CGG | 0.592595 | 8_2:-1637038 | Msa1226720:CDS |
| AAAGTATGCAGCAATAGCAA+GGG | 0.593183 | 8_2:-1637108 | Msa1226720:CDS |
| GCTGGCCTTGCTCACAGTGT+AGG | 0.593474 | 8_2:-1637814 | Msa1226720:CDS |
| CACGTGGCATGTGCTCTGTG+TGG | 0.596078 | 8_2:-1642028 | Msa1226720:CDS |
| GGTTGCTCTAGCTTTGATTG+AGG | 0.597081 | 8_2:-1638151 | Msa1226720:CDS |
| ACCATACTGTGGACACGTAA+GGG | 0.598695 | 8_2:+1637131 | None:intergenic |
| CTGCATACTTTACCATACTG+TGG | 0.600089 | 8_2:+1637120 | None:intergenic |
| TTAGTCCTACACTGTGAGCA+AGG | 0.600437 | 8_2:+1637809 | None:intergenic |
| GTTGTGATTGTTGAAGAGGC+CGG | 0.603344 | 8_2:-1637014 | Msa1226720:CDS |
| TGGAAACAACCTCAGTCGCA+AGG | 0.604031 | 8_2:+1641987 | None:intergenic |
| CAGAGCATGCAATTATGCCT+CGG | 0.606208 | 8_2:+1636922 | None:intergenic |
| GTTACTATCGAAAACATTTG+GGG | 0.610069 | 8_2:-1638445 | Msa1226720:CDS |
| CTCTTCAACAATCACAACAC+CGG | 0.618190 | 8_2:+1637019 | None:intergenic |
| TTGTATGCAAAGAGAGGCAG+TGG | 0.622560 | 8_2:-1637988 | Msa1226720:CDS |
| GGCACATTGGGATTTGTACG+GGG | 0.624183 | 8_2:-1638186 | Msa1226720:CDS |
| ATCCCAATGTGCCGTCAACA+GGG | 0.626643 | 8_2:+1638196 | None:intergenic |
| AGAGAGGCAGTGGTGAGGCG+TGG | 0.628860 | 8_2:-1637978 | Msa1226720:CDS |
| TGTTGAAGAGGCCGGTGGTG+TGG | 0.638056 | 8_2:-1637006 | Msa1226720:CDS |
| CCTTTGAAAAGTCTAGAGGT+CGG | 0.639579 | 8_2:+1636967 | None:intergenic |
| GGCATCGGTTACCACACCAC+CGG | 0.647173 | 8_2:+1636995 | None:intergenic |
| GTTCCCTTTGAAAAGTCTAG+AGG | 0.652497 | 8_2:+1636963 | None:intergenic |
| AGCTGTGAGGATTGTCCACG+TGG | 0.653121 | 8_2:-1642044 | Msa1226720:CDS |
| TGCAAAGAGAGGCAGTGGTG+AGG | 0.660835 | 8_2:-1637983 | Msa1226720:CDS |
| TCAACAACTCTTGATGCATG+CGG | 0.662013 | 8_2:-1638024 | Msa1226720:CDS |
| TGGAACATCAGAAGTTCTCG+CGG | 0.662297 | 8_2:-1638274 | Msa1226720:CDS |
| CACACAGAGCACATGCCACG+TGG | 0.669994 | 8_2:+1642029 | None:intergenic |
| TACTTAGAGGGTCTTGACCG+AGG | 0.675960 | 8_2:-1636939 | Msa1226720:CDS |
| AAGTATGCAGCAATAGCAAG+GGG | 0.677278 | 8_2:-1637107 | Msa1226720:CDS |
| GTGATTGTTGAAGAGGCCGG+TGG | 0.685575 | 8_2:-1637011 | Msa1226720:CDS |
| GGTGTGGTAACCGATGCCGG+AGG | 0.697260 | 8_2:-1636990 | Msa1226720:CDS |
| GAGAATTAGAGATAGCTGTG+AGG | 0.704747 | 8_2:-1642057 | Msa1226720:CDS |
| AGATGTAGAAACTTTCACCA+AGG | 0.717876 | 8_2:-1638394 | Msa1226720:CDS |
| TGTGTGTTGTATGCAAAGAG+AGG | 0.730469 | 8_2:-1637994 | Msa1226720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTTAATCTTTATTTA+TGG | - | chr8_2:1636937-1636956 | Msa1226720:CDS | 10.0% |
| !! | TATATTATTGAATGATAAAA+TGG | - | chr8_2:1638782-1638801 | Msa1226720:intron | 10.0% |
| !! | ATATTATTGAATGATAAAAT+GGG | - | chr8_2:1638783-1638802 | Msa1226720:intron | 10.0% |
| !! | ATATAATATAATATAATTCC+AGG | - | chr8_2:1641405-1641424 | Msa1226720:intron | 10.0% |
| !!! | CAGTTTTTTTTTTTTTTTTA+GGG | + | chr8_2:1641468-1641487 | None:intergenic | 10.0% |
| !! | CTAAAAAAAAAAAAAAAACT+GGG | - | chr8_2:1641467-1641486 | Msa1226720:intron | 10.0% |
| !! | TAACAAAGATAAAAAATAGA+TGG | + | chr8_2:1638017-1638036 | None:intergenic | 15.0% |
| !! | TATTATTGAATGATAAAATG+GGG | - | chr8_2:1638784-1638803 | Msa1226720:intron | 15.0% |
| !! | AAAATTCAAATTATGTCAAT+GGG | + | chr8_2:1639146-1639165 | None:intergenic | 15.0% |
| !! | AAAAATTCAAATTATGTCAA+TGG | + | chr8_2:1639147-1639166 | None:intergenic | 15.0% |
| !! | AAAATTTATTAAGATGACAA+TGG | - | chr8_2:1639878-1639897 | Msa1226720:intron | 15.0% |
| !!! | AATTATTGGTTTTATCTTTA+AGG | - | chr8_2:1640046-1640065 | Msa1226720:intron | 15.0% |
| !!! | TACTAGATATTTTTGTTTTT+CGG | - | chr8_2:1640309-1640328 | Msa1226720:intron | 15.0% |
| !!! | TATGTATAATTTTAGTTGTA+CGG | + | chr8_2:1641386-1641405 | None:intergenic | 15.0% |
| !!! | CCAGTTTTTTTTTTTTTTTT+AGG | + | chr8_2:1641469-1641488 | None:intergenic | 15.0% |
| !! | CCTAAAAAAAAAAAAAAAAC+TGG | - | chr8_2:1641466-1641485 | Msa1226720:intron | 15.0% |
| !!! | AATAAACTTAGATTATGTTT+TGG | + | chr8_2:1641614-1641633 | None:intergenic | 15.0% |
| !!! | TAATTTTTCAGTATAATCAT+TGG | - | chr8_2:1642070-1642089 | Msa1226720:CDS | 15.0% |
| !!! | CATAATTTGTTTTCGTTTAT+TGG | - | chr8_2:1636972-1636991 | Msa1226720:CDS | 20.0% |
| !!! | TGGAATAATTTCAAGTTTTA+AGG | - | chr8_2:1637394-1637413 | Msa1226720:intron | 20.0% |
| !!! | GGAATAATTTCAAGTTTTAA+GGG | - | chr8_2:1637395-1637414 | Msa1226720:intron | 20.0% |
| !! | CTTAGATAGTTAGAATTAAA+AGG | + | chr8_2:1637494-1637513 | None:intergenic | 20.0% |
| !! | ACACAAGATTGATTATTATA+GGG | + | chr8_2:1637735-1637754 | None:intergenic | 20.0% |
| !! | AACACAAGATTGATTATTAT+AGG | + | chr8_2:1637736-1637755 | None:intergenic | 20.0% |
| !!! | TTCTTCAAAATTGAGATTTT+AGG | + | chr8_2:1637763-1637782 | None:intergenic | 20.0% |
| !! | ATCAATCTAGTTAAGTATTA+TGG | - | chr8_2:1637818-1637837 | Msa1226720:CDS | 20.0% |
| !! | ATTAGGATAATGTATATGTA+TGG | - | chr8_2:1638226-1638245 | Msa1226720:CDS | 20.0% |
| !! | TTAGGATAATGTATATGTAT+GGG | - | chr8_2:1638227-1638246 | Msa1226720:CDS | 20.0% |
| !!! | TGATTTATGTGTAACTTTTA+CGG | + | chr8_2:1638668-1638687 | None:intergenic | 20.0% |
| !!! | TTTCGTTATCTTGATTTTAT+GGG | + | chr8_2:1638760-1638779 | None:intergenic | 20.0% |
| !!! | ATTTCGTTATCTTGATTTTA+TGG | + | chr8_2:1638761-1638780 | None:intergenic | 20.0% |
| !! | GGGAATATTATGTTATAAAA+GGG | + | chr8_2:1638960-1638979 | None:intergenic | 20.0% |
| !! | AGGGAATATTATGTTATAAA+AGG | + | chr8_2:1638961-1638980 | None:intergenic | 20.0% |
| !! | ATCATAAAATTCATTCAAGA+AGG | - | chr8_2:1639247-1639266 | Msa1226720:intron | 20.0% |
| !!! | TTGTGTTATTTTAGATAGAA+AGG | - | chr8_2:1639297-1639316 | Msa1226720:intron | 20.0% |
| !! | TAAGATCTACATTATTGTAT+AGG | - | chr8_2:1639358-1639377 | Msa1226720:intron | 20.0% |
| !! | TAAATCAAAATACTTCTCAA+CGG | + | chr8_2:1639649-1639668 | None:intergenic | 20.0% |
| !!! | GAGAAGTATTTTGATTTAAA+TGG | - | chr8_2:1639651-1639670 | Msa1226720:intron | 20.0% |
| !!! | AAGTCTTTTCTCATTAAATA+AGG | + | chr8_2:1639735-1639754 | None:intergenic | 20.0% |
| !! | TTATTTAATGAGAAAAGACT+TGG | - | chr8_2:1639734-1639753 | Msa1226720:intron | 20.0% |
| !! | TATTTAATGAGAAAAGACTT+GGG | - | chr8_2:1639735-1639754 | Msa1226720:intron | 20.0% |
| !! | ATGTACCAATTACATATAAA+AGG | - | chr8_2:1639805-1639824 | Msa1226720:intron | 20.0% |
| !! | TGTACCAATTACATATAAAA+GGG | - | chr8_2:1639806-1639825 | Msa1226720:intron | 20.0% |
| !!! | TCACTTTTATTGAGTATATA+TGG | - | chr8_2:1640113-1640132 | Msa1226720:intron | 20.0% |
| !! | TTAATTATTGTACTTTCGAT+AGG | - | chr8_2:1641431-1641450 | Msa1226720:intron | 20.0% |
| ! | GATAGTTAGAATTAAAAGGA+AGG | + | chr8_2:1637490-1637509 | None:intergenic | 25.0% |
| ! | ACTTTACAAAATGCTTATGA+CGG | + | chr8_2:1637608-1637627 | None:intergenic | 25.0% |
| ! | CACAAGATTGATTATTATAG+GGG | + | chr8_2:1637734-1637753 | None:intergenic | 25.0% |
| !!! | AATCTCAATTTTGAAGAAGT+TGG | - | chr8_2:1637765-1637784 | Msa1226720:intron | 25.0% |
| !! | ATAGTGTGATACATTCATTT+TGG | - | chr8_2:1637941-1637960 | Msa1226720:CDS | 25.0% |
| !! | TAGTGTGATACATTCATTTT+GGG | - | chr8_2:1637942-1637961 | Msa1226720:CDS | 25.0% |
| !! | TCTTATGGACTTACTATTTT+TGG | + | chr8_2:1638072-1638091 | None:intergenic | 25.0% |
| ! | ATCTACAAATGAAGTAGTTA+TGG | + | chr8_2:1638157-1638176 | None:intergenic | 25.0% |
| ! | TCTTAAAAGCTTAAGCTATT+AGG | - | chr8_2:1638209-1638228 | Msa1226720:CDS | 25.0% |
| ! | TACAATCTGTAATTGTGAAA+TGG | - | chr8_2:1638326-1638345 | Msa1226720:CDS | 25.0% |
| !! | TGTTGTATCCAACATTTTAA+TGG | - | chr8_2:1638552-1638571 | Msa1226720:intron | 25.0% |
| ! | CATAATATTCCCTAAAATCA+AGG | - | chr8_2:1638968-1638987 | Msa1226720:intron | 25.0% |
| ! | TAGAAGATTGTAGAAACATA+GGG | + | chr8_2:1639016-1639035 | None:intergenic | 25.0% |
| ! | TTCATGATGCAATTAATTGT+AGG | - | chr8_2:1639080-1639099 | Msa1226720:intron | 25.0% |
| ! | TGTCATATGGTTAAATGTAT+TGG | - | chr8_2:1639185-1639204 | Msa1226720:intron | 25.0% |
| ! | GTCATATGGTTAAATGTATT+GGG | - | chr8_2:1639186-1639205 | Msa1226720:intron | 25.0% |
| ! | TAAAATTCATTCAAGAAGGA+TGG | - | chr8_2:1639251-1639270 | Msa1226720:intron | 25.0% |
| ! | TATTGTATAGGATTAACTGT+TGG | - | chr8_2:1639370-1639389 | Msa1226720:intron | 25.0% |
| ! | ATGAAACAGTTGTAATAGAT+AGG | - | chr8_2:1639435-1639454 | Msa1226720:intron | 25.0% |
| ! | AACACCTATGATAGAAAATA+TGG | - | chr8_2:1639493-1639512 | Msa1226720:intron | 25.0% |
| !!! | TTCATTTTGCTGTTAGAATT+TGG | - | chr8_2:1639836-1639855 | Msa1226720:intron | 25.0% |
| ! | TGATGTTCAGTAACTAATAA+TGG | + | chr8_2:1640000-1640019 | None:intergenic | 25.0% |
| ! | TGAAATACTAAAAACACTAC+AGG | + | chr8_2:1640096-1640115 | None:intergenic | 25.0% |
| ! | AAAAAAGGTTAAGAAATCGA+AGG | + | chr8_2:1640184-1640203 | None:intergenic | 25.0% |
| ! | ACATTTATAAGCGAGAAAAA+AGG | + | chr8_2:1640199-1640218 | None:intergenic | 25.0% |
| ! | GAAACTAGTGATATTAGAAA+TGG | - | chr8_2:1640224-1640243 | Msa1226720:intron | 25.0% |
| ! | AAGTACAATAATTAAATGCC+TGG | + | chr8_2:1641426-1641445 | None:intergenic | 25.0% |
| ! | AATTTCAGAGAATACAGATT+AGG | + | chr8_2:1641573-1641592 | None:intergenic | 25.0% |
| ! | TTTGGAAGATATTGTAAACA+AGG | + | chr8_2:1641596-1641615 | None:intergenic | 25.0% |
| ! | TGCAAATTTCATGAATATCT+CGG | + | chr8_2:1641783-1641802 | None:intergenic | 25.0% |
| ! | AGGTTACAAAGAAAAGATAT+GGG | - | chr8_2:1641808-1641827 | Msa1226720:intron | 25.0% |
| ! | AAAAAAGCCTCATAAATTTG+AGG | + | chr8_2:1642014-1642033 | None:intergenic | 25.0% |
| !! | TTGTTTTCGTTTATTGGTTG+TGG | - | chr8_2:1636978-1636997 | Msa1226720:CDS | 30.0% |
| !! | TGTTTTCGTTTATTGGTTGT+GGG | - | chr8_2:1636979-1636998 | Msa1226720:CDS | 30.0% |
| ACATATGAATCTGATCCATA+AGG | + | chr8_2:1637074-1637093 | None:intergenic | 30.0% | |
| TTAAATCCATAGTAGAATCC+AGG | + | chr8_2:1637205-1637224 | None:intergenic | 30.0% | |
| TCACAAGTGTTTATGTTAGT+AGG | - | chr8_2:1637298-1637317 | Msa1226720:intron | 30.0% | |
| CGTGAATGATTCTCTAATAT+GGG | + | chr8_2:1637352-1637371 | None:intergenic | 30.0% | |
| ACGTGAATGATTCTCTAATA+TGG | + | chr8_2:1637353-1637372 | None:intergenic | 30.0% | |
| ! | TTGCAAATCTCTTTTGCTTT+TGG | - | chr8_2:1637374-1637393 | Msa1226720:intron | 30.0% |
| CTTTACAAAATGCTTATGAC+GGG | + | chr8_2:1637607-1637626 | None:intergenic | 30.0% | |
| ATTGATTATTATAGGGGCTT+GGG | + | chr8_2:1637728-1637747 | None:intergenic | 30.0% | |
| ! | AATCAGCTGAAGTCTAAAAT+TGG | - | chr8_2:1637872-1637891 | Msa1226720:CDS | 30.0% |
| ! | ATCAGCTGAAGTCTAAAATT+GGG | - | chr8_2:1637873-1637892 | Msa1226720:CDS | 30.0% |
| ! | AGTGTGATACATTCATTTTG+GGG | - | chr8_2:1637943-1637962 | Msa1226720:CDS | 30.0% |
| CAAACCAATGTCGAATATTA+TGG | + | chr8_2:1637969-1637988 | None:intergenic | 30.0% | |
| ! | CATAATATTCGACATTGGTT+TGG | - | chr8_2:1637967-1637986 | Msa1226720:CDS | 30.0% |
| ! | ATTTTGTCAAAGATCCCTTT+TGG | - | chr8_2:1638111-1638130 | Msa1226720:CDS | 30.0% |
| AATCTGTAATTGTGAAATGG+TGG | - | chr8_2:1638329-1638348 | Msa1226720:CDS | 30.0% | |
| CAAGAAATGCATCATATAGA+CGG | + | chr8_2:1638403-1638422 | None:intergenic | 30.0% | |
| !!! | CCTTGACCTTATTTTAAAAC+CGG | - | chr8_2:1638441-1638460 | Msa1226720:CDS | 30.0% |
| !! | TATCCAACATTTTAATGGAC+AGG | - | chr8_2:1638557-1638576 | Msa1226720:intron | 30.0% |
| TTTCCTGTCCATTAAAATGT+TGG | + | chr8_2:1638563-1638582 | None:intergenic | 30.0% | |
| TAATTAAGAGAGTTTCTCTC+TGG | + | chr8_2:1638895-1638914 | None:intergenic | 30.0% | |
| ATGTTATAAAAGGGAGTGAA+GGG | + | chr8_2:1638951-1638970 | None:intergenic | 30.0% | |
| TATGTTATAAAAGGGAGTGA+AGG | + | chr8_2:1638952-1638971 | None:intergenic | 30.0% | |
| ! | TAGCACTTTCCTTGATTTTA+GGG | + | chr8_2:1638980-1638999 | None:intergenic | 30.0% |
| ! | TTAGCACTTTCCTTGATTTT+AGG | + | chr8_2:1638981-1639000 | None:intergenic | 30.0% |
| CTAGAAGATTGTAGAAACAT+AGG | + | chr8_2:1639017-1639036 | None:intergenic | 30.0% | |
| ACAGTACAAAAACTGTCATA+TGG | - | chr8_2:1639172-1639191 | Msa1226720:intron | 30.0% | |
| CTATTACAACTGTTTCATCT+GGG | + | chr8_2:1639433-1639452 | None:intergenic | 30.0% | |
| TCTATTACAACTGTTTCATC+TGG | + | chr8_2:1639434-1639453 | None:intergenic | 30.0% | |
| CAGTTGTAATAGATAGGAAA+AGG | - | chr8_2:1639441-1639460 | Msa1226720:intron | 30.0% | |
| CCTATGATAGAAAATATGGA+CGG | - | chr8_2:1639497-1639516 | Msa1226720:intron | 30.0% | |
| TTTGGTCTATCATCTATACT+GGG | + | chr8_2:1639566-1639585 | None:intergenic | 30.0% | |
| ATTTGGTCTATCATCTATAC+TGG | + | chr8_2:1639567-1639586 | None:intergenic | 30.0% | |
| ATAGATGATAGACCAAATAG+AGG | - | chr8_2:1639569-1639588 | Msa1226720:intron | 30.0% | |
| TCATTAGACTATCCTCTATT+TGG | + | chr8_2:1639584-1639603 | None:intergenic | 30.0% | |
| TTCATGATAAGACATTAGAG+CGG | - | chr8_2:1639691-1639710 | Msa1226720:intron | 30.0% | |
| ! | GCTACCCTTTTATATGTAAT+TGG | + | chr8_2:1639813-1639832 | None:intergenic | 30.0% |
| TTGGTATGATAACTTTGCAA+AGG | - | chr8_2:1639855-1639874 | Msa1226720:intron | 30.0% | |
| !! | GTGTCTTTTCTTACTTTTCA+TGG | - | chr8_2:1639937-1639956 | Msa1226720:intron | 30.0% |
| ! | ATGGTAACAATGTCTCTTTT+TGG | - | chr8_2:1639970-1639989 | Msa1226720:intron | 30.0% |
| !! | CTTTAAGGTCAATATGAAAC+TGG | - | chr8_2:1640061-1640080 | Msa1226720:intron | 30.0% |
| TTCTCGCTTATAAATGTGAA+TGG | - | chr8_2:1640202-1640221 | Msa1226720:intron | 30.0% | |
| TGGTTACTATCGAAAACATT+TGG | - | chr8_2:1640412-1640431 | Msa1226720:intron | 30.0% | |
| GGTTACTATCGAAAACATTT+GGG | - | chr8_2:1640413-1640432 | Msa1226720:intron | 30.0% | |
| GTTACTATCGAAAACATTTG+GGG | - | chr8_2:1640414-1640433 | Msa1226720:intron | 30.0% | |
| ! | ATATCGTTGTTTGATGATAC+TGG | + | chr8_2:1640807-1640826 | None:intergenic | 30.0% |
| !! | AGTGTCTTGTTTGAAGATTA+AGG | - | chr8_2:1641193-1641212 | Msa1226720:intron | 30.0% |
| AGCTTATGCATATCAATAAG+TGG | + | chr8_2:1641236-1641255 | None:intergenic | 30.0% | |
| TACTTTCGATAGGAACAATA+TGG | - | chr8_2:1641441-1641460 | Msa1226720:intron | 30.0% | |
| ! | AATTCCAACAATGGTGTTAA+AGG | + | chr8_2:1641669-1641688 | None:intergenic | 30.0% |
| TTCATGAAATTTGCAAAGTC+AGG | - | chr8_2:1641788-1641807 | Msa1226720:intron | 30.0% | |
| CAGGTTACAAAGAAAAGATA+TGG | - | chr8_2:1641807-1641826 | Msa1226720:intron | 30.0% | |
| AAAAAACCTGCAACAGTAAC+AGG | + | chr8_2:1636912-1636931 | None:intergenic | 35.0% | |
| CAAAATGTGCTATAGCCTAT+AGG | - | chr8_2:1637038-1637057 | Msa1226720:CDS | 35.0% | |
| TATGAATCTGATCCATAAGG+CGG | + | chr8_2:1637071-1637090 | None:intergenic | 35.0% | |
| TGGATCAGATTCATATGTGA+TGG | - | chr8_2:1637076-1637095 | Msa1226720:CDS | 35.0% | |
| GGATCAGATTCATATGTGAT+GGG | - | chr8_2:1637077-1637096 | Msa1226720:CDS | 35.0% | |
| GAAAGGAAATAGCAAAATCC+TGG | - | chr8_2:1637184-1637203 | Msa1226720:intron | 35.0% | |
| CAAAATCCTGGATTCTACTA+TGG | - | chr8_2:1637196-1637215 | Msa1226720:intron | 35.0% | |
| CTATGGATTTAAGTCGTTGA+AGG | - | chr8_2:1637213-1637232 | Msa1226720:intron | 35.0% | |
| CGACTTAAATCCTAAAATCC+AGG | + | chr8_2:1637257-1637276 | None:intergenic | 35.0% | |
| !! | GACTTGTTAGAGATGTGATA+CGG | - | chr8_2:1637434-1637453 | Msa1226720:intron | 35.0% |
| TATAAGTATCCAAGCTAGTG+AGG | - | chr8_2:1637462-1637481 | Msa1226720:intron | 35.0% | |
| !! | TTAATTAGCGCTGGTAGTAT+GGG | + | chr8_2:1637545-1637564 | None:intergenic | 35.0% |
| !! | ATTAATTAGCGCTGGTAGTA+TGG | + | chr8_2:1637546-1637565 | None:intergenic | 35.0% |
| ATACTACCAGCGCTAATTAA+TGG | - | chr8_2:1637545-1637564 | Msa1226720:intron | 35.0% | |
| ATATGCAGTCATGTAGATGA+AGG | + | chr8_2:1637673-1637692 | None:intergenic | 35.0% | |
| GATTGATTATTATAGGGGCT+TGG | + | chr8_2:1637729-1637748 | None:intergenic | 35.0% | |
| GCATTGCATGTGTATTCTTA+TGG | + | chr8_2:1638087-1638106 | None:intergenic | 35.0% | |
| GATCAATCTTCAGTCCAAAA+GGG | + | chr8_2:1638128-1638147 | None:intergenic | 35.0% | |
| TGATCAATCTTCAGTCCAAA+AGG | + | chr8_2:1638129-1638148 | None:intergenic | 35.0% | |
| GTGTATGGTTATACTAGTTG+TGG | + | chr8_2:1638381-1638400 | None:intergenic | 35.0% | |
| !!! | CCGGTTTTAAAATAAGGTCA+AGG | + | chr8_2:1638444-1638463 | None:intergenic | 35.0% |
| !!! | CCAGTTCCGGTTTTAAAATA+AGG | + | chr8_2:1638450-1638469 | None:intergenic | 35.0% |
| !!! | CCTTATTTTAAAACCGGAAC+TGG | - | chr8_2:1638447-1638466 | Msa1226720:CDS | 35.0% |
| GATGTTCTTATACCGACATA+AGG | - | chr8_2:1638484-1638503 | Msa1226720:intron | 35.0% | |
| ! | CAAGACAGGAGAATTCTTTT+GGG | + | chr8_2:1638696-1638715 | None:intergenic | 35.0% |
| !! | GAACCAAGCATTGAATTTGA+TGG | - | chr8_2:1638732-1638751 | Msa1226720:intron | 35.0% |
| GTTCCATCAAATTCAATGCT+TGG | + | chr8_2:1638738-1638757 | None:intergenic | 35.0% | |
| ATCTAGATACATTCAGCTAC+TGG | + | chr8_2:1639117-1639136 | None:intergenic | 35.0% | |
| GGTTCATCATGCAAAATAAC+AGG | - | chr8_2:1639207-1639226 | Msa1226720:intron | 35.0% | |
| AATAACAGGTAGATAGAGAG+AGG | - | chr8_2:1639221-1639240 | Msa1226720:intron | 35.0% | |
| TGTTTCATCTGGGCAATATT+GGG | + | chr8_2:1639423-1639442 | None:intergenic | 35.0% | |
| AAAACACTAGAGAGAAAGTC+AGG | - | chr8_2:1639468-1639487 | Msa1226720:intron | 35.0% | |
| AAACACTAGAGAGAAAGTCA+GGG | - | chr8_2:1639469-1639488 | Msa1226720:intron | 35.0% | |
| ! | CCGTCCATATTTTCTATCAT+AGG | + | chr8_2:1639500-1639519 | None:intergenic | 35.0% |
| GAGGATAGTCTAATGATTAG+AGG | - | chr8_2:1639588-1639607 | Msa1226720:intron | 35.0% | |
| CAAAATACTTCTCAACGGTT+TGG | + | chr8_2:1639644-1639663 | None:intergenic | 35.0% | |
| AGCGGTTTCATTTGATTAAC+AGG | - | chr8_2:1639709-1639728 | Msa1226720:intron | 35.0% | |
| ! | TGGTTTGTAATTTCCTCTCT+TGG | - | chr8_2:1639898-1639917 | Msa1226720:intron | 35.0% |
| GAGACATTGTTACCATGAAT+GGG | + | chr8_2:1639966-1639985 | None:intergenic | 35.0% | |
| AGAGACATTGTTACCATGAA+TGG | + | chr8_2:1639967-1639986 | None:intergenic | 35.0% | |
| ACCTCGATACTCTCAATTAT+TGG | - | chr8_2:1640032-1640051 | Msa1226720:intron | 35.0% | |
| !! | ACCAATAATTGAGAGTATCG+AGG | + | chr8_2:1640036-1640055 | None:intergenic | 35.0% |
| TCAGAATGTGTCAATTGTTG+CGG | - | chr8_2:1640438-1640457 | Msa1226720:intron | 35.0% | |
| AGATGTAGAAACTTTCACCA+AGG | - | chr8_2:1640465-1640484 | Msa1226720:intron | 35.0% | |
| !! | TTAGCTTTTGCATCCATGTA+TGG | - | chr8_2:1640538-1640557 | Msa1226720:intron | 35.0% |
| CATTCTAATGTCCTATCTTC+AGG | + | chr8_2:1640922-1640941 | None:intergenic | 35.0% | |
| CTGAAGATAGGACATTAGAA+TGG | - | chr8_2:1640920-1640939 | Msa1226720:intron | 35.0% | |
| TCAACAGAAGAAACTCGAAT+AGG | + | chr8_2:1640961-1640980 | None:intergenic | 35.0% | |
| !! | AGTTTCTTCTGTTGATGATC+CGG | - | chr8_2:1640966-1640985 | Msa1226720:intron | 35.0% |
| TACAGTTGCAGAACAATTGA+CGG | + | chr8_2:1641101-1641120 | None:intergenic | 35.0% | |
| CTTTCATATCTACTGGACAT+AGG | - | chr8_2:1641494-1641513 | Msa1226720:intron | 35.0% | |
| CATAGGAAGCTATGAAAGAT+AGG | - | chr8_2:1641511-1641530 | Msa1226720:intron | 35.0% | |
| AAAGATAGGAATCATAGACC+AGG | - | chr8_2:1641525-1641544 | Msa1226720:intron | 35.0% | |
| GATTAGGAACTCAAAACAGA+AGG | + | chr8_2:1641557-1641576 | None:intergenic | 35.0% | |
| TCTTCCTTTAACACCATTGT+TGG | - | chr8_2:1641662-1641681 | Msa1226720:intron | 35.0% | |
| GAGCATTTCAATTCCAACAA+TGG | + | chr8_2:1641678-1641697 | None:intergenic | 35.0% | |
| TAAAGTATGCAGCAATAGCA+AGG | - | chr8_2:1641750-1641769 | Msa1226720:intron | 35.0% | |
| AAAGTATGCAGCAATAGCAA+GGG | - | chr8_2:1641751-1641770 | Msa1226720:intron | 35.0% | |
| ! | GTGATGGAGGGTGAAAAATA+CGG | - | chr8_2:1636777-1636796 | Msa1226720:three_prime_UTR | 40.0% |
| GAGAATTAGAGATAGCTGTG+AGG | - | chr8_2:1636802-1636821 | Msa1226720:three_prime_UTR | 40.0% | |
| AACAGGAGAATCATCATCCT+TGG | + | chr8_2:1636895-1636914 | None:intergenic | 40.0% | |
| ! | CAACCTTGGTGACAATGTTT+GGG | + | chr8_2:1637139-1637158 | None:intergenic | 40.0% |
| ! | ACAACCTTGGTGACAATGTT+TGG | + | chr8_2:1637140-1637159 | None:intergenic | 40.0% |
| GTCACCAAGGTTGTCAAAAT+CGG | - | chr8_2:1637146-1637165 | Msa1226720:intron | 40.0% | |
| TCACCAAGGTTGTCAAAATC+GGG | - | chr8_2:1637147-1637166 | Msa1226720:intron | 40.0% | |
| TCAAAATCGGGACTTACTTC+AGG | - | chr8_2:1637159-1637178 | Msa1226720:intron | 40.0% | |
| TGAAGAAAGTCGCAAAATCC+TGG | - | chr8_2:1637236-1637255 | Msa1226720:intron | 40.0% | |
| ! | GTCGCAAAATCCTGGATTTT+AGG | - | chr8_2:1637244-1637263 | Msa1226720:intron | 40.0% |
| TAAGGGCTATATAGCATGAG+AGG | - | chr8_2:1637412-1637431 | Msa1226720:intron | 40.0% | |
| CTAATTAATGGCAGCCATGA+TGG | - | chr8_2:1637557-1637576 | Msa1226720:intron | 40.0% | |
| TGACTGCATATCACTCAATG+TGG | - | chr8_2:1637682-1637701 | Msa1226720:intron | 40.0% | |
| GACTGCATATCACTCAATGT+GGG | - | chr8_2:1637683-1637702 | Msa1226720:intron | 40.0% | |
| ACTGCATATCACTCAATGTG+GGG | - | chr8_2:1637684-1637703 | Msa1226720:intron | 40.0% | |
| TTATAGGGGCTTGGGTATAA+TGG | + | chr8_2:1637720-1637739 | None:intergenic | 40.0% | |
| TACAGATGTAATGTACCTGC+AGG | - | chr8_2:1638288-1638307 | Msa1226720:CDS | 40.0% | |
| TAACTAGTGATATCACCTGC+AGG | + | chr8_2:1638306-1638325 | None:intergenic | 40.0% | |
| TGCATCATATAGACGGTGTA+TGG | + | chr8_2:1638396-1638415 | None:intergenic | 40.0% | |
| TGATGCATTTCTTGCATCAC+AGG | - | chr8_2:1638409-1638428 | Msa1226720:CDS | 40.0% | |
| TGGCTGAAAACTTTCTGGAT+TGG | - | chr8_2:1638515-1638534 | Msa1226720:intron | 40.0% | |
| ! | CCAAGACAGGAGAATTCTTT+TGG | + | chr8_2:1638697-1638716 | None:intergenic | 40.0% |
| CCAAAAGAATTCTCCTGTCT+TGG | - | chr8_2:1638694-1638713 | Msa1226720:intron | 40.0% | |
| ACACAGAAATCATCCAAGAC+AGG | + | chr8_2:1638710-1638729 | None:intergenic | 40.0% | |
| GTCTTGGATGATTTCTGTGT+TGG | - | chr8_2:1638710-1638729 | Msa1226720:intron | 40.0% | |
| !! | GCTTTAGAGCTCTACAATGA+TGG | - | chr8_2:1638808-1638827 | Msa1226720:intron | 40.0% |
| AAGAGAGTTTCTCTCTGGTT+AGG | + | chr8_2:1638890-1638909 | None:intergenic | 40.0% | |
| GCTGAATGTATCTAGATGCT+TGG | - | chr8_2:1639120-1639139 | Msa1226720:intron | 40.0% | |
| CAAGAAGGATGGAATAGAAG+TGG | - | chr8_2:1639262-1639281 | Msa1226720:intron | 40.0% | |
| CTGTTTCATCTGGGCAATAT+TGG | + | chr8_2:1639424-1639443 | None:intergenic | 40.0% | |
| GAGGTAGAGAGATAGACTAA+TGG | - | chr8_2:1639607-1639626 | Msa1226720:intron | 40.0% | |
| AAGACAACAACATCCAAGAG+AGG | + | chr8_2:1639914-1639933 | None:intergenic | 40.0% | |
| ! | TTTTCATGGTCTCCCATTCA+TGG | - | chr8_2:1639951-1639970 | Msa1226720:intron | 40.0% |
| CTTCCTTAGCAATGTCTCTA+TGG | - | chr8_2:1640286-1640305 | Msa1226720:intron | 40.0% | |
| GTACCATAGAGACATTGCTA+AGG | + | chr8_2:1640292-1640311 | None:intergenic | 40.0% | |
| GTGTTCAAGCAATCACTAGT+TGG | - | chr8_2:1640392-1640411 | Msa1226720:intron | 40.0% | |
| TTCACCAAGGATGATTCAAC+AGG | - | chr8_2:1640478-1640497 | Msa1226720:intron | 40.0% | |
| TAAGCCTGTTGAATCATCCT+TGG | + | chr8_2:1640485-1640504 | None:intergenic | 40.0% | |
| CAAGAGTTATGTCTGGACTT+TGG | + | chr8_2:1640567-1640586 | None:intergenic | 40.0% | |
| CAAAGTCCAGACATAACTCT+TGG | - | chr8_2:1640565-1640584 | Msa1226720:intron | 40.0% | |
| GATGTTCCAAGAGTTATGTC+TGG | + | chr8_2:1640574-1640593 | None:intergenic | 40.0% | |
| GAGGATGGAAAAGTTGTTCT+TGG | - | chr8_2:1640727-1640746 | Msa1226720:intron | 40.0% | |
| TCTGACTTCACTGGGTAATT+GGG | + | chr8_2:1640766-1640785 | None:intergenic | 40.0% | |
| TTCTGACTTCACTGGGTAAT+TGG | + | chr8_2:1640767-1640786 | None:intergenic | 40.0% | |
| ATTACCCAGTGAAGTCAGAA+TGG | - | chr8_2:1640767-1640786 | Msa1226720:intron | 40.0% | |
| TTAGCCATTCTGACTTCACT+GGG | + | chr8_2:1640774-1640793 | None:intergenic | 40.0% | |
| TTTAGCCATTCTGACTTCAC+TGG | + | chr8_2:1640775-1640794 | None:intergenic | 40.0% | |
| TCAACAACTCTTGATGCATG+CGG | - | chr8_2:1640835-1640854 | Msa1226720:intron | 40.0% | |
| TGTGTGTTGTATGCAAAGAG+AGG | - | chr8_2:1640865-1640884 | Msa1226720:intron | 40.0% | |
| !! | AGTCGTTGATTCCTGAAGAT+AGG | - | chr8_2:1640908-1640927 | Msa1226720:intron | 40.0% |
| TAGAATGGCCAAATTGTGCT+AGG | - | chr8_2:1640935-1640954 | Msa1226720:intron | 40.0% | |
| TCTATGCGAACCAGTAGAAA+GGG | - | chr8_2:1640999-1641018 | Msa1226720:intron | 40.0% | |
| ! | TTTGAGTTTGCCCTTTCTAC+TGG | + | chr8_2:1641012-1641031 | None:intergenic | 40.0% |
| ACAGTTGCAGAACAATTGAC+GGG | + | chr8_2:1641100-1641119 | None:intergenic | 40.0% | |
| AAGACCCGAGGTAACAAATA+GGG | - | chr8_2:1641359-1641378 | Msa1226720:intron | 40.0% | |
| AGGAACTCAAAACAGAAGGA+AGG | + | chr8_2:1641553-1641572 | None:intergenic | 40.0% | |
| TGCTCTACACTCTCAAAATC+TGG | - | chr8_2:1641693-1641712 | Msa1226720:intron | 40.0% | |
| CTGCATACTTTACCATACTG+TGG | + | chr8_2:1641742-1641761 | None:intergenic | 40.0% | |
| AAGTATGCAGCAATAGCAAG+GGG | - | chr8_2:1641752-1641771 | Msa1226720:intron | 40.0% | |
| CTCTTCAACAATCACAACAC+CGG | + | chr8_2:1641843-1641862 | None:intergenic | 40.0% | |
| ! | CCTTTGAAAAGTCTAGAGGT+CGG | + | chr8_2:1641895-1641914 | None:intergenic | 40.0% |
| ! | CGACCTCTAGACTTTTCAAA+GGG | - | chr8_2:1641893-1641912 | Msa1226720:intron | 40.0% |
| ! | GTTCCCTTTGAAAAGTCTAG+AGG | + | chr8_2:1641899-1641918 | None:intergenic | 40.0% |
| TTCAAAGGGAACGTACTTAG+AGG | - | chr8_2:1641907-1641926 | Msa1226720:intron | 40.0% | |
| TCAAAGGGAACGTACTTAGA+GGG | - | chr8_2:1641908-1641927 | Msa1226720:intron | 40.0% | |
| ! | TTGATGCTGTTTATGCTAGC+TGG | - | chr8_2:1641984-1642003 | Msa1226720:CDS | 40.0% |
| ! | TGATGCTGTTTATGCTAGCT+GGG | - | chr8_2:1641985-1642004 | Msa1226720:CDS | 40.0% |
| TGGGACTCCTCAAATTTATG+AGG | - | chr8_2:1642004-1642023 | Msa1226720:CDS | 40.0% | |
| GATTCTCCTGTTACTGTTGC+AGG | - | chr8_2:1636903-1636922 | Msa1226720:CDS | 45.0% | |
| TAAGGCGGTGCATTACCTAT+AGG | + | chr8_2:1637056-1637075 | None:intergenic | 45.0% | |
| ATAGGTAATGCACCGCCTTA+TGG | - | chr8_2:1637056-1637075 | Msa1226720:CDS | 45.0% | |
| GATCCCAAACATTGTCACCA+AGG | - | chr8_2:1637133-1637152 | Msa1226720:CDS | 45.0% | |
| !! | AGTCCCGATTTTGACAACCT+TGG | + | chr8_2:1637153-1637172 | None:intergenic | 45.0% |
| ! | TAATGGCAGCCATGATGGAA+TGG | - | chr8_2:1637562-1637581 | Msa1226720:intron | 45.0% |
| ACCACAATGGCATGTCTGTA+TGG | - | chr8_2:1637638-1637657 | Msa1226720:intron | 45.0% | |
| ACCATACAGACATGCCATTG+TGG | + | chr8_2:1637642-1637661 | None:intergenic | 45.0% | |
| ACAATGGCATGTCTGTATGG+TGG | - | chr8_2:1637641-1637660 | Msa1226720:intron | 45.0% | |
| CAATGGCATGTCTGTATGGT+GGG | - | chr8_2:1637642-1637661 | Msa1226720:intron | 45.0% | |
| ATATCACTCAATGTGGGGCT+TGG | - | chr8_2:1637689-1637708 | Msa1226720:intron | 45.0% | |
| TATCACTCAATGTGGGGCTT+GGG | - | chr8_2:1637690-1637709 | Msa1226720:intron | 45.0% | |
| GGGGCCATAATATTCGACAT+TGG | - | chr8_2:1637962-1637981 | Msa1226720:CDS | 45.0% | |
| TATGCATCTCTCACCAGTTC+CGG | + | chr8_2:1638463-1638482 | None:intergenic | 45.0% | |
| ACCGACATAAGGATTCAGCT+TGG | - | chr8_2:1638495-1638514 | Msa1226720:intron | 45.0% | |
| GCCAAGCTGAATCCTTATGT+CGG | + | chr8_2:1638499-1638518 | None:intergenic | 45.0% | |
| CAGCTTGGCTGAAAACTTTC+TGG | - | chr8_2:1638510-1638529 | Msa1226720:intron | 45.0% | |
| CAGTCCAGCTGGATAACAAT+GGG | + | chr8_2:1638602-1638621 | None:intergenic | 45.0% | |
| ! | TTATCCAGCTGGACTGGAAT+AGG | - | chr8_2:1638606-1638625 | Msa1226720:intron | 45.0% |
| ATTTCCTATTCCAGTCCAGC+TGG | + | chr8_2:1638613-1638632 | None:intergenic | 45.0% | |
| ATGCCCAAACAAACCAAGAC+GGG | + | chr8_2:1639524-1639543 | None:intergenic | 45.0% | |
| CATGCCCAAACAAACCAAGA+CGG | + | chr8_2:1639525-1639544 | None:intergenic | 45.0% | |
| !! | TTGGTTTGTTTGGGCATGTG+TGG | - | chr8_2:1639527-1639546 | Msa1226720:intron | 45.0% |
| ACCATCACAGACAGTTGTAC+TGG | - | chr8_2:1639774-1639793 | Msa1226720:intron | 45.0% | |
| ACCAGTACAACTGTCTGTGA+TGG | + | chr8_2:1639778-1639797 | None:intergenic | 45.0% | |
| GGATGATTCAACAGGCTTAC+TGG | - | chr8_2:1640486-1640505 | Msa1226720:intron | 45.0% | |
| ! | TGGACTTTGGAGACCATACA+TGG | + | chr8_2:1640554-1640573 | None:intergenic | 45.0% |
| TGGAACATCAGAAGTTCTCG+CGG | - | chr8_2:1640585-1640604 | Msa1226720:intron | 45.0% | |
| ACGGCACATTGGGATTTGTA+CGG | - | chr8_2:1640671-1640690 | Msa1226720:intron | 45.0% | |
| !! | GGTTGCTCTAGCTTTGATTG+AGG | - | chr8_2:1640708-1640727 | Msa1226720:intron | 45.0% |
| !! | GCTCTAGCTTTGATTGAGGA+TGG | - | chr8_2:1640712-1640731 | Msa1226720:intron | 45.0% |
| ACTCTTGATGCATGCGGAAA+AGG | - | chr8_2:1640841-1640860 | Msa1226720:intron | 45.0% | |
| TTGTATGCAAAGAGAGGCAG+TGG | - | chr8_2:1640871-1640890 | Msa1226720:intron | 45.0% | |
| CGAATAGGCCTAGCACAATT+TGG | + | chr8_2:1640946-1640965 | None:intergenic | 45.0% | |
| !! | TTCTGTTGATGATCCGGCAT+TGG | - | chr8_2:1640972-1640991 | Msa1226720:intron | 45.0% |
| CTCTATGCGAACCAGTAGAA+AGG | - | chr8_2:1640998-1641017 | Msa1226720:intron | 45.0% | |
| TCAAACCATTCCTTCACAGC+TGG | - | chr8_2:1641027-1641046 | Msa1226720:intron | 45.0% | |
| TTAGTCCTACACTGTGAGCA+AGG | + | chr8_2:1641053-1641072 | None:intergenic | 45.0% | |
| TTGCTCACAGTGTAGGACTA+AGG | - | chr8_2:1641052-1641071 | Msa1226720:intron | 45.0% | |
| !!! | ACCTCGGGTCTTGTTTTGAT+AGG | + | chr8_2:1641351-1641370 | None:intergenic | 45.0% |
| CAAGACCCGAGGTAACAAAT+AGG | - | chr8_2:1641358-1641377 | Msa1226720:intron | 45.0% | |
| ! | ACGGACCCTATTTGTTACCT+CGG | + | chr8_2:1641367-1641386 | None:intergenic | 45.0% |
| GGGACGACTTTCATATCTAC+TGG | - | chr8_2:1641487-1641506 | Msa1226720:intron | 45.0% | |
| ACCATACTGTGGACACGTAA+GGG | + | chr8_2:1641731-1641750 | None:intergenic | 45.0% | |
| TACCATACTGTGGACACGTA+AGG | + | chr8_2:1641732-1641751 | None:intergenic | 45.0% | |
| AAGATATGGGATCATGCTGC+CGG | - | chr8_2:1641821-1641840 | Msa1226720:intron | 45.0% | |
| !! | CGGTGTTGTGATTGTTGAAG+AGG | - | chr8_2:1641841-1641860 | Msa1226720:intron | 45.0% |
| GTTGTGATTGTTGAAGAGGC+CGG | - | chr8_2:1641845-1641864 | Msa1226720:intron | 45.0% | |
| ! | CCGACCTCTAGACTTTTCAA+AGG | - | chr8_2:1641892-1641911 | Msa1226720:intron | 45.0% |
| CAGAGCATGCAATTATGCCT+CGG | + | chr8_2:1641940-1641959 | None:intergenic | 45.0% | |
| TTTGCGTCTTGGCTACGTGA+TGG | - | chr8_2:1636761-1636780 | Msa1226720:three_prime_UTR | 50.0% | |
| TGGAAACAACCTCAGTCGCA+AGG | + | chr8_2:1636875-1636894 | None:intergenic | 50.0% | |
| ! | TGCGACTGAGGTTGTTTCCA+AGG | - | chr8_2:1636875-1636894 | Msa1226720:CDS | 50.0% |
| GGGACTTACTTCAGGTCGAA+AGG | - | chr8_2:1637167-1637186 | Msa1226720:intron | 50.0% | |
| AGGAAGGATCCTCACTAGCT+TGG | + | chr8_2:1637474-1637493 | None:intergenic | 50.0% | |
| !! | TTAGCGCTGGTAGTATGGGA+TGG | + | chr8_2:1637541-1637560 | None:intergenic | 50.0% |
| TGGCTGCCATTAATTAGCGC+TGG | + | chr8_2:1637554-1637573 | None:intergenic | 50.0% | |
| AGTGACGATGCAGACCACAA+TGG | - | chr8_2:1637625-1637644 | Msa1226720:intron | 50.0% | |
| !! | GCATGTCTGTATGGTGGGTT+TGG | - | chr8_2:1637647-1637666 | Msa1226720:intron | 50.0% |
| TTCGCCCATTGTTATCCAGC+TGG | - | chr8_2:1638595-1638614 | Msa1226720:intron | 50.0% | |
| CCAGTCCAGCTGGATAACAA+TGG | + | chr8_2:1638603-1638622 | None:intergenic | 50.0% | |
| CCATTGTTATCCAGCTGGAC+TGG | - | chr8_2:1638600-1638619 | Msa1226720:intron | 50.0% | |
| !! | TGGTAGGAGTGTTCACACTC+TGG | + | chr8_2:1638855-1638874 | None:intergenic | 50.0% |
| !! | TAGGAGCATTGTGCTCTGGT+AGG | + | chr8_2:1638871-1638890 | None:intergenic | 50.0% |
| !! | TGGTTAGGAGCATTGTGCTC+TGG | + | chr8_2:1638875-1638894 | None:intergenic | 50.0% |
| AAATATGGACGGTCCCGTCT+TGG | - | chr8_2:1639508-1639527 | Msa1226720:intron | 50.0% | |
| !! | GGTCCCGTCTTGGTTTGTTT+GGG | - | chr8_2:1639518-1639537 | Msa1226720:intron | 50.0% |
| !! | AGGTGCTAGTGGAAGGCATT+GGG | - | chr8_2:1640633-1640652 | Msa1226720:intron | 50.0% |
| TGGGTACTTGACCCTGTTGA+CGG | - | chr8_2:1640652-1640671 | Msa1226720:intron | 50.0% | |
| ATCCCAATGTGCCGTCAACA+GGG | + | chr8_2:1640666-1640685 | None:intergenic | 50.0% | |
| AATCCCAATGTGCCGTCAAC+AGG | + | chr8_2:1640667-1640686 | None:intergenic | 50.0% | |
| CGGCACATTGGGATTTGTAC+GGG | - | chr8_2:1640672-1640691 | Msa1226720:intron | 50.0% | |
| GGCACATTGGGATTTGTACG+GGG | - | chr8_2:1640673-1640692 | Msa1226720:intron | 50.0% | |
| TCGCATAGAGTTGCCAATGC+CGG | + | chr8_2:1640988-1641007 | None:intergenic | 50.0% | |
| GCCTATCAAAACAAGACCCG+AGG | - | chr8_2:1641347-1641366 | Msa1226720:intron | 50.0% | |
| ! | CGGACCCTATTTGTTACCTC+GGG | + | chr8_2:1641366-1641385 | None:intergenic | 50.0% |
| !! | CAAAACAGAAGGAAGGTGCC+TGG | + | chr8_2:1641546-1641565 | None:intergenic | 50.0% |
| TACTTAGAGGGTCTTGACCG+AGG | - | chr8_2:1641920-1641939 | Msa1226720:intron | 50.0% | |
| CGAGGCATAATTGCATGCTC+TGG | - | chr8_2:1641938-1641957 | Msa1226720:intron | 50.0% | |
| ! | CGTCTTGGCTACGTGATGGA+GGG | - | chr8_2:1636765-1636784 | Msa1226720:three_prime_UTR | 55.0% |
| AGCTGTGAGGATTGTCCACG+TGG | - | chr8_2:1636815-1636834 | Msa1226720:three_prime_UTR | 55.0% | |
| ACGTGGCATGTGCTCTGTGT+GGG | - | chr8_2:1636832-1636851 | Msa1226720:three_prime_UTR | 55.0% | |
| CGCTGGTAGTATGGGATGGT+CGG | + | chr8_2:1637537-1637556 | None:intergenic | 55.0% | |
| !! | CGGTCCCGTCTTGGTTTGTT+TGG | - | chr8_2:1639517-1639536 | Msa1226720:intron | 55.0% |
| AGGCTTACTGGAAGCTGTCG+TGG | - | chr8_2:1640498-1640517 | Msa1226720:intron | 55.0% | |
| TCAGAAGTTCTCGCGGCCAT+TGG | - | chr8_2:1640592-1640611 | Msa1226720:intron | 55.0% | |
| ! | GAGGTGCTAGTGGAAGGCAT+TGG | - | chr8_2:1640632-1640651 | Msa1226720:intron | 55.0% |
| TGACCCTGTTGACGGCACAT+TGG | - | chr8_2:1640660-1640679 | Msa1226720:intron | 55.0% | |
| GACCCTGTTGACGGCACATT+GGG | - | chr8_2:1640661-1640680 | Msa1226720:intron | 55.0% | |
| TGTACGGGGCGATCAGTATG+CGG | - | chr8_2:1640687-1640706 | Msa1226720:intron | 55.0% | |
| TGCAAAGAGAGGCAGTGGTG+AGG | - | chr8_2:1640876-1640895 | Msa1226720:intron | 55.0% | |
| CAAGGCCAGCTGTGAAGGAA+TGG | + | chr8_2:1641035-1641054 | None:intergenic | 55.0% | |
| GCCCTTACGTGTCCACAGTA+TGG | - | chr8_2:1641727-1641746 | Msa1226720:intron | 55.0% | |
| GTGATTGTTGAAGAGGCCGG+TGG | - | chr8_2:1641848-1641867 | Msa1226720:intron | 55.0% | |
| AAAGTCTAGAGGTCGGCCTC+CGG | + | chr8_2:1641888-1641907 | None:intergenic | 55.0% | |
| GCGTCTTGGCTACGTGATGG+AGG | - | chr8_2:1636764-1636783 | Msa1226720:three_prime_UTR | 60.0% | |
| CACACAGAGCACATGCCACG+TGG | + | chr8_2:1636833-1636852 | None:intergenic | 60.0% | |
| CACGTGGCATGTGCTCTGTG+TGG | - | chr8_2:1636831-1636850 | Msa1226720:three_prime_UTR | 60.0% | |
| TGGCATGTGCTCTGTGTGGG+AGG | - | chr8_2:1636835-1636854 | Msa1226720:three_prime_UTR | 60.0% | |
| GGCATGTGCTCTGTGTGGGA+GGG | - | chr8_2:1636836-1636855 | Msa1226720:three_prime_UTR | 60.0% | |
| GGAGAAGCTCCTTGCGACTG+AGG | - | chr8_2:1636863-1636882 | Msa1226720:CDS | 60.0% | |
| ! | GCAGCCATGATGGAATGGCG+TGG | - | chr8_2:1637567-1637586 | Msa1226720:intron | 60.0% |
| ! | GCCATGATGGAATGGCGTGG+CGG | - | chr8_2:1637570-1637589 | Msa1226720:intron | 60.0% |
| ! | CCATGATGGAATGGCGTGGC+GGG | - | chr8_2:1637571-1637590 | Msa1226720:intron | 60.0% |
| CATTGGCCGCTGCAGCTCAA+CGG | - | chr8_2:1640609-1640628 | Msa1226720:intron | 60.0% | |
| ATTGGCCGCTGCAGCTCAAC+GGG | - | chr8_2:1640610-1640629 | Msa1226720:intron | 60.0% | |
| !! | AGCTCAACGGGAGGTGCTAG+TGG | - | chr8_2:1640622-1640641 | Msa1226720:intron | 60.0% |
| !! | CAACGGGAGGTGCTAGTGGA+AGG | - | chr8_2:1640626-1640645 | Msa1226720:intron | 60.0% |
| GTGAGCAAGGCCAGCTGTGA+AGG | + | chr8_2:1641040-1641059 | None:intergenic | 60.0% | |
| !! | GCTGGCCTTGCTCACAGTGT+AGG | - | chr8_2:1641045-1641064 | Msa1226720:intron | 60.0% |
| TGTTGAAGAGGCCGGTGGTG+TGG | - | chr8_2:1641853-1641872 | Msa1226720:intron | 60.0% | |
| !! | GGCATCGGTTACCACACCAC+CGG | + | chr8_2:1641867-1641886 | None:intergenic | 60.0% |
| GGTGGTGTGGTAACCGATGC+CGG | - | chr8_2:1641866-1641885 | Msa1226720:intron | 60.0% | |
| ! | TGCTCTGTGTGGGAGGGTGC+AGG | - | chr8_2:1636842-1636861 | Msa1226720:exon | 65.0% |
| CCCGCCACGCCATTCCATCA+TGG | + | chr8_2:1637574-1637593 | None:intergenic | 65.0% | |
| CGTTGAGCTGCAGCGGCCAA+TGG | + | chr8_2:1640611-1640630 | None:intergenic | 65.0% | |
| CACCTCCCGTTGAGCTGCAG+CGG | + | chr8_2:1640618-1640637 | None:intergenic | 65.0% | |
| AGAGAGGCAGTGGTGAGGCG+TGG | - | chr8_2:1640881-1640900 | Msa1226720:intron | 65.0% | |
| GGTGTGGTAACCGATGCCGG+AGG | - | chr8_2:1641869-1641888 | Msa1226720:intron | 65.0% | |
| TAGAGGTCGGCCTCCGGCAT+CGG | + | chr8_2:1641882-1641901 | None:intergenic | 65.0% | |
| GGCCGCTGCAGCTCAACGGG+AGG | - | chr8_2:1640613-1640632 | Msa1226720:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 1636752 | 1642129 | 1636752 | ID=Msa1226720;Name=Msa1226720 |
| chr8_2 | mRNA | 1636752 | 1642129 | 1636752 | ID=Msa1226720-mRNA-1;Parent=Msa1226720;Name=Msa1226720-mRNA-1;_AED=0.04;_eAED=0.04;_QI=28|1|1|1|1|1|3|105|378 |
| chr8_2 | exon | 1636752 | 1637160 | 1636752 | ID=Msa1226720-mRNA-1:exon:299;Parent=Msa1226720-mRNA-1 |
| chr8_2 | exon | 1637808 | 1638495 | 1637808 | ID=Msa1226720-mRNA-1:exon:298;Parent=Msa1226720-mRNA-1 |
| chr8_2 | exon | 1641957 | 1642129 | 1641957 | ID=Msa1226720-mRNA-1:exon:297;Parent=Msa1226720-mRNA-1 |
| chr8_2 | five_prime_UTR | 1642102 | 1642129 | 1642102 | ID=Msa1226720-mRNA-1:five_prime_utr;Parent=Msa1226720-mRNA-1 |
| chr8_2 | CDS | 1641957 | 1642101 | 1641957 | ID=Msa1226720-mRNA-1:cds;Parent=Msa1226720-mRNA-1 |
| chr8_2 | CDS | 1637808 | 1638495 | 1637808 | ID=Msa1226720-mRNA-1:cds;Parent=Msa1226720-mRNA-1 |
| chr8_2 | CDS | 1636857 | 1637160 | 1636857 | ID=Msa1226720-mRNA-1:cds;Parent=Msa1226720-mRNA-1 |
| chr8_2 | three_prime_UTR | 1636752 | 1636856 | 1636752 | ID=Msa1226720-mRNA-1:three_prime_utr;Parent=Msa1226720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
