Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286970 | XP_013445554.1 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286970 | sp|Q38945|DPNPH_ARATH | 68.435 | 377 | 100 | 4 | 9 | 378 | 9 | 373 | 6.00e-180 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286970 | A0A072U199 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 766 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027260 | Msa1286970 | 0.802881 | 4.545757e-49 | -8.615850e-47 |
| Msa0029260 | Msa1286970 | 0.811851 | 5.693522e-51 | -8.615850e-47 |
| Msa0048180 | Msa1286970 | 0.811965 | 5.376721e-51 | -8.615850e-47 |
| Msa0615580 | Msa1286970 | 0.824274 | 8.822816e-54 | -8.615850e-47 |
| Msa0654870 | Msa1286970 | 0.813626 | 2.327451e-51 | -8.615850e-47 |
| Msa0662630 | Msa1286970 | 0.801631 | 8.221100e-49 | -8.615850e-47 |
| Msa0666230 | Msa1286970 | 0.817187 | 3.755784e-52 | -8.615850e-47 |
| Msa0750920 | Msa1286970 | 0.809511 | 1.825179e-50 | -8.615850e-47 |
| Msa0751010 | Msa1286970 | 0.801223 | 9.965980e-49 | -8.615850e-47 |
| Msa0794050 | Msa1286970 | 0.803577 | 3.261762e-49 | -8.615850e-47 |
| Msa0127040 | Msa1286970 | 0.815807 | 7.648838e-52 | -8.615850e-47 |
| Msa0128860 | Msa1286970 | 0.826011 | 3.427616e-54 | -8.615850e-47 |
| Msa0140300 | Msa1286970 | 0.808887 | 2.483034e-50 | -8.615850e-47 |
| Msa0167480 | Msa1286970 | 0.821513 | 3.878807e-53 | -8.615850e-47 |
| Msa0169300 | Msa1286970 | 0.806244 | 9.039149e-50 | -8.615850e-47 |
| Msa0171410 | Msa1286970 | 0.816008 | 6.899775e-52 | -8.615850e-47 |
| Msa0174730 | Msa1286970 | 0.824953 | 6.102155e-54 | -8.615850e-47 |
| Msa0188350 | Msa1286970 | 0.802191 | 6.307915e-49 | -8.615850e-47 |
| Msa0199690 | Msa1286970 | 0.800351 | 1.501135e-48 | -8.615850e-47 |
| Msa0231100 | Msa1286970 | 0.803148 | 4.002789e-49 | -8.615850e-47 |
| Msa1226720 | Msa1286970 | 0.856131 | 3.959035e-62 | -8.615850e-47 |
| Msa1286970 | Msa1286980 | 0.910829 | 1.209031e-82 | -8.615850e-47 |
| Msa1286970 | Msa1303580 | 0.816075 | 6.665292e-52 | -8.615850e-47 |
| Msa1286970 | Msa1341070 | 0.803288 | 3.743885e-49 | -8.615850e-47 |
| Msa1286970 | Msa1343290 | 0.814600 | 1.418441e-51 | -8.615850e-47 |
| Msa1286970 | Msa1363330 | 0.801282 | 9.691287e-49 | -8.615850e-47 |
| Msa1286970 | Msa1379760 | 0.824600 | 7.392408e-54 | -8.615850e-47 |
| Msa1286970 | Msa1386600 | 0.801100 | 1.056082e-48 | -8.615850e-47 |
| Msa1286970 | Msa1450280 | 0.806307 | 8.766547e-50 | -8.615850e-47 |
| Msa0370160 | Msa1286970 | -0.829137 | 6.090115e-55 | -8.615850e-47 |
| Msa0436200 | Msa1286970 | 0.830098 | 3.555138e-55 | -8.615850e-47 |
| Msa0437690 | Msa1286970 | -0.817155 | 3.818304e-52 | -8.615850e-47 |
| Msa0443390 | Msa1286970 | 0.819767 | 9.771786e-53 | -8.615850e-47 |
| Msa1019240 | Msa1286970 | 0.820746 | 5.827482e-53 | -8.615850e-47 |
| Msa1019260 | Msa1286970 | 0.830011 | 3.732616e-55 | -8.615850e-47 |
| Msa1104210 | Msa1286970 | 0.828295 | 9.731747e-55 | -8.615850e-47 |
| Msa0262480 | Msa1286970 | 0.842577 | 2.375114e-58 | -8.615850e-47 |
| Msa0300350 | Msa1286970 | 0.829641 | 4.594746e-55 | -8.615850e-47 |
| Msa1125790 | Msa1286970 | -0.805978 | 1.027939e-49 | -8.615850e-47 |
| Msa1126830 | Msa1286970 | 0.808157 | 3.555189e-50 | -8.615850e-47 |
| Msa1131560 | Msa1286970 | 0.801257 | 9.805558e-49 | -8.615850e-47 |
| Msa1165780 | Msa1286970 | 0.829337 | 5.445499e-55 | -8.615850e-47 |
| Msa1166870 | Msa1286970 | 0.834490 | 2.909160e-56 | -8.615850e-47 |
| Msa0509950 | Msa1286970 | -0.819574 | 1.081315e-52 | -8.615850e-47 |
| Msa0524590 | Msa1286970 | 0.835649 | 1.484297e-56 | -8.615850e-47 |
| Msa0526540 | Msa1286970 | 0.802526 | 5.381623e-49 | -8.615850e-47 |
| Msa0581110 | Msa1286970 | 0.806410 | 8.337758e-50 | -8.615850e-47 |
| Msa0879850 | Msa1286970 | 0.833985 | 3.892294e-56 | -8.615850e-47 |
| Msa0974810 | Msa1286970 | 0.813826 | 2.102752e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286970 | MtrunA17_Chr8g0360681 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 766 |
| Msa1286970 | MtrunA17_Chr2g0281361 | 67.895 | 380 | 119 | 1 | 2 | 378 | 87 | 466 | 0.0 | 541 |
| Msa1286970 | MtrunA17_Chr4g0048001 | 57.672 | 378 | 154 | 2 | 2 | 378 | 78 | 450 | 3.90e-152 | 436 |
| Msa1286970 | MtrunA17_Chr4g0052431 | 42.330 | 352 | 175 | 7 | 23 | 374 | 90 | 413 | 4.67e-87 | 269 |
| Msa1286970 | MtrunA17_Chr2g0281081 | 32.494 | 397 | 203 | 17 | 2 | 369 | 45 | 405 | 2.08e-41 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1286970 | AT5G54390.1 | 68.435 | 377 | 100 | 4 | 9 | 378 | 9 | 373 | 0.0 | 507 |
| Msa1286970 | AT5G63980.1 | 43.490 | 361 | 174 | 6 | 6 | 366 | 3 | 333 | 1.29e-92 | 281 |
| Msa1286970 | AT5G09290.1 | 40.483 | 373 | 184 | 7 | 6 | 378 | 3 | 337 | 3.43e-84 | 260 |
| Msa1286970 | AT5G63990.1 | 39.782 | 367 | 192 | 7 | 6 | 372 | 3 | 340 | 2.30e-80 | 250 |
| Msa1286970 | AT5G64000.1 | 40.214 | 373 | 193 | 9 | 6 | 378 | 3 | 345 | 7.98e-75 | 236 |
| Msa1286970 | AT5G63990.2 | 37.736 | 318 | 171 | 5 | 6 | 323 | 3 | 293 | 2.07e-65 | 210 |
| Msa1286970 | AT5G64000.2 | 39.877 | 326 | 166 | 9 | 53 | 378 | 7 | 302 | 2.32e-63 | 205 |
| Msa1286970 | AT4G05090.1 | 29.870 | 385 | 217 | 13 | 5 | 372 | 45 | 393 | 1.84e-36 | 137 |
| Msa1286970 | AT4G05090.2 | 28.052 | 385 | 192 | 12 | 5 | 372 | 45 | 361 | 7.67e-30 | 118 |
Find 118 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGTCTTCACTGGGTAAT+TGG | 0.149759 | 8_3:-35889781 | None:intergenic |
| GGATGATTCAACAGGCTTAC+TGG | 0.290137 | 8_3:+35889503 | Msa1286970:CDS |
| GATTCTCCTGTTACTGTTGC+AGG | 0.294670 | 8_3:+35885906 | Msa1286970:CDS |
| TTCAAAGGGAACGTACTTAG+AGG | 0.300891 | 8_3:+35890951 | Msa1286970:CDS |
| GGTTACTATCGAAAACATTT+GGG | 0.313262 | 8_3:+35889430 | Msa1286970:CDS |
| AAAGTTGTTCTTGGAGTTCT+TGG | 0.314451 | 8_3:+35889753 | Msa1286970:CDS |
| GAGGATGGAAAAGTTGTTCT+TGG | 0.316763 | 8_3:+35889744 | Msa1286970:CDS |
| CGAATAGGCCTAGCACAATT+TGG | 0.328303 | 8_3:-35889960 | None:intergenic |
| TGGTTACTATCGAAAACATT+TGG | 0.329051 | 8_3:+35889429 | Msa1286970:CDS |
| AATCCCAATGTGCCGTCAAC+AGG | 0.339938 | 8_3:-35889681 | None:intergenic |
| TTGATGCTGTTTATGCTAGC+TGG | 0.345159 | 8_3:+35891028 | Msa1286970:CDS |
| GACCCTGTTGACGGCACATT+GGG | 0.370234 | 8_3:+35889678 | Msa1286970:CDS |
| TTCATGAAATTTGCAAAGTC+AGG | 0.372813 | 8_3:+35890832 | Msa1286970:CDS |
| ATTGGCCGCTGCAGCTCAAC+GGG | 0.373644 | 8_3:+35889627 | Msa1286970:CDS |
| TTTGAGTTTGCCCTTTCTAC+TGG | 0.375537 | 8_3:-35890026 | None:intergenic |
| TCTGTCTTCACTGGGTAATT+GGG | 0.382974 | 8_3:-35889780 | None:intergenic |
| CAGGTTACAAAGAAAAGATA+TGG | 0.389849 | 8_3:+35890851 | Msa1286970:CDS |
| ATATCGTTGTTTGATGATAC+TGG | 0.400328 | 8_3:-35889821 | None:intergenic |
| TTTAGCCATTCTGTCTTCAC+TGG | 0.404672 | 8_3:-35889789 | None:intergenic |
| ACTCTTGATGCATGCGGAAA+AGG | 0.410703 | 8_3:+35889858 | Msa1286970:CDS |
| TGCAAATTTCATGAATATCT+CGG | 0.414493 | 8_3:-35890824 | None:intergenic |
| AGTTTCTTCCATTGATGATC+CGG | 0.430345 | 8_3:+35889983 | Msa1286970:CDS |
| ACGGCACATTGGGATTTGTA+CGG | 0.436123 | 8_3:+35889688 | Msa1286970:CDS |
| CATTCTAACGTCCTATCTTC+AGG | 0.439215 | 8_3:-35889936 | None:intergenic |
| GCCCTTACGTGTCCACAGTA+TGG | 0.443252 | 8_3:+35890771 | Msa1286970:CDS |
| AAGTTGTTCTTGGAGTTCTT+GGG | 0.448569 | 8_3:+35889754 | Msa1286970:CDS |
| CGTTGAGCTGCAGCGGCCAA+TGG | 0.448822 | 8_3:-35889625 | None:intergenic |
| AGGTGCTAGTGGAAGGCATT+GGG | 0.449905 | 8_3:+35889650 | Msa1286970:CDS |
| TTCACCAAGGATGATTCAAC+AGG | 0.452198 | 8_3:+35889495 | Msa1286970:CDS |
| AACAGGAGAATCATCATCCT+TGG | 0.461732 | 8_3:-35885895 | None:intergenic |
| CAAAGTCCAGACATAACTCT+TGG | 0.464532 | 8_3:+35889582 | Msa1286970:CDS |
| CGGCACATTGGGATTTGTAC+GGG | 0.465953 | 8_3:+35889689 | Msa1286970:CDS |
| TGGGACTCCTCAAATTTATG+AGG | 0.466477 | 8_3:+35891048 | Msa1286970:CDS |
| TTCCATTGATGATCCGGCAT+TGG | 0.472242 | 8_3:+35889989 | Msa1286970:CDS |
| CATTGGCCGCTGCAGCTCAA+CGG | 0.472445 | 8_3:+35889626 | Msa1286970:CDS |
| TGGGTACTTGACCCTGTTGA+CGG | 0.474366 | 8_3:+35889669 | Msa1286970:CDS |
| CAAGAGTTATGTCTGGACTT+TGG | 0.476091 | 8_3:-35889581 | None:intergenic |
| GGTGGTGTGGTAACCGATGC+CGG | 0.477095 | 8_3:+35890910 | Msa1286970:CDS |
| CTCTATGCGAACCAGTAGAA+AGG | 0.478562 | 8_3:+35890015 | Msa1286970:CDS |
| AGTCGTTGATTCCTGAAGAT+AGG | 0.478934 | 8_3:+35889925 | Msa1286970:CDS |
| TGCTCTGTGTGGGAGGGTGC+AGG | 0.482761 | 8_3:+35885845 | Msa1286970:CDS |
| TAGAGGTCGGCCTCCGGCAT+CGG | 0.486133 | 8_3:-35890923 | None:intergenic |
| AGGCTTACTGGAAGCTGTTG+TGG | 0.490527 | 8_3:+35889515 | Msa1286970:CDS |
| GATGTCCCAAGAGTTATGTC+TGG | 0.491422 | 8_3:-35889588 | None:intergenic |
| TGATGCTGTTTATGCTAGCT+GGG | 0.492410 | 8_3:+35891029 | Msa1286970:CDS |
| TGCCAATGCCGGATCATCAA+TGG | 0.493482 | 8_3:-35889991 | None:intergenic |
| TGCGACTGAGGTTGTTTCCA+AGG | 0.494061 | 8_3:+35885878 | Msa1286970:CDS |
| TACCATACTGTGGACACGTA+AGG | 0.499750 | 8_3:-35890773 | None:intergenic |
| GTGAGCAAGGCCAGCTGTGA+AGG | 0.502989 | 8_3:-35890054 | None:intergenic |
| GAGGTGCTAGTGGAAGGCAT+TGG | 0.506229 | 8_3:+35889649 | Msa1286970:CDS |
| TCAGAAGTTCTCGCGGCCAT+TGG | 0.506928 | 8_3:+35889609 | Msa1286970:CDS |
| TCAATGGAAGAAACTCGAAT+AGG | 0.507481 | 8_3:-35889975 | None:intergenic |
| TTTGCGTCTTGGCTACGTGA+TGG | 0.517115 | 8_3:+35885764 | Msa1286970:exon |
| GCTCTAGCTTTGATTGAGGA+TGG | 0.519160 | 8_3:+35889729 | Msa1286970:CDS |
| CAAGGCCAGCTGTGAAGGAA+TGG | 0.524890 | 8_3:-35890049 | None:intergenic |
| GTGTTCAAGCAATCACTAGT+TGG | 0.526250 | 8_3:+35889409 | Msa1286970:CDS |
| TCAAACCATTCCTTCACAGC+TGG | 0.535193 | 8_3:+35890044 | Msa1286970:CDS |
| ACGTGGCATGTGCTCTGTGT+GGG | 0.537331 | 8_3:+35885835 | Msa1286970:CDS |
| GGCCGCTGCAGCTCAACGGG+AGG | 0.542625 | 8_3:+35889630 | Msa1286970:CDS |
| AAAGTCTAGAGGTCGGCCTC+CGG | 0.545768 | 8_3:-35890929 | None:intergenic |
| CGAGGCATAATTGCATGCTC+TGG | 0.546827 | 8_3:+35890982 | Msa1286970:CDS |
| TCAAAGGGAACGTACTTAGA+GGG | 0.547056 | 8_3:+35890952 | Msa1286970:CDS |
| AAAGTCCAGACATAACTCTT+GGG | 0.547791 | 8_3:+35889583 | Msa1286970:CDS |
| TGACCCTGTTGACGGCACAT+TGG | 0.552603 | 8_3:+35889677 | Msa1286970:CDS |
| TCGCATAGAGTTGCCAATGC+CGG | 0.553182 | 8_3:-35890002 | None:intergenic |
| TCTATGCGAACCAGTAGAAA+GGG | 0.553675 | 8_3:+35890016 | Msa1286970:CDS |
| CACCTCCCGTTGAGCTGCAG+CGG | 0.555384 | 8_3:-35889632 | None:intergenic |
| TTGCTCACAGTGTAGGACTA+AGG | 0.556338 | 8_3:+35890069 | Msa1286970:CDS |
| CGGTGTTGTGATTGTTGAAG+AGG | 0.559759 | 8_3:+35890885 | Msa1286970:CDS |
| TAAGCCTGTTGAATCATCCT+TGG | 0.561506 | 8_3:-35889499 | None:intergenic |
| AGCTCAACGGGAGGTGCTAG+TGG | 0.561690 | 8_3:+35889639 | Msa1286970:CDS |
| CAACGGGAGGTGCTAGTGGA+AGG | 0.562576 | 8_3:+35889643 | Msa1286970:CDS |
| TGGCATGTGCTCTGTGTGGG+AGG | 0.564800 | 8_3:+35885838 | Msa1286970:CDS |
| CTGAAGATAGGACGTTAGAA+TGG | 0.566383 | 8_3:+35889937 | Msa1286970:CDS |
| TCAGAATGTGTCAATTGTTG+CGG | 0.566580 | 8_3:+35889455 | Msa1286970:CDS |
| AGGTTACAAAGAAAAGATAT+GGG | 0.567323 | 8_3:+35890852 | Msa1286970:CDS |
| GGCATGTGCTCTGTGTGGGA+GGG | 0.570415 | 8_3:+35885839 | Msa1286970:CDS |
| TAAAGTATGCAGCAATAGCA+AGG | 0.571197 | 8_3:+35890794 | Msa1286970:CDS |
| ATTACCCAGTGAAGACAGAA+TGG | 0.576246 | 8_3:+35889784 | Msa1286970:CDS |
| TAGAATGGCCAAATTGTGCT+AGG | 0.579511 | 8_3:+35889952 | Msa1286970:CDS |
| GGAGAAGCTCCTTGCGACTG+AGG | 0.582374 | 8_3:+35885866 | Msa1286970:CDS |
| CGTCTTGGCTACGTGATGGA+GGG | 0.582948 | 8_3:+35885768 | Msa1286970:exon |
| GCGTCTTGGCTACGTGATGG+AGG | 0.584581 | 8_3:+35885767 | Msa1286970:exon |
| TGGACTTTGGAGACCATACA+TGG | 0.586518 | 8_3:-35889568 | None:intergenic |
| TTAGCCATTCTGTCTTCACT+GGG | 0.592184 | 8_3:-35889788 | None:intergenic |
| AAGATATGGGATCATGCTGC+CGG | 0.592595 | 8_3:+35890865 | Msa1286970:CDS |
| AAAGTATGCAGCAATAGCAA+GGG | 0.593183 | 8_3:+35890795 | Msa1286970:CDS |
| GCTGGCCTTGCTCACAGTGT+AGG | 0.593474 | 8_3:+35890062 | Msa1286970:CDS |
| CACGTGGCATGTGCTCTGTG+TGG | 0.596078 | 8_3:+35885834 | Msa1286970:CDS |
| GGTTGCTCTAGCTTTGATTG+AGG | 0.597081 | 8_3:+35889725 | Msa1286970:CDS |
| ACCATACTGTGGACACGTAA+GGG | 0.598695 | 8_3:-35890772 | None:intergenic |
| CTGCATACTTTACCATACTG+TGG | 0.600089 | 8_3:-35890783 | None:intergenic |
| TTAGTCCTACACTGTGAGCA+AGG | 0.600437 | 8_3:-35890067 | None:intergenic |
| GTTGTGATTGTTGAAGAGGC+CGG | 0.603344 | 8_3:+35890889 | Msa1286970:CDS |
| TGGAAACAACCTCAGTCGCA+AGG | 0.604031 | 8_3:-35885875 | None:intergenic |
| CAGAGCATGCAATTATGCCT+CGG | 0.606208 | 8_3:-35890981 | None:intergenic |
| GTTACTATCGAAAACATTTG+GGG | 0.610069 | 8_3:+35889431 | Msa1286970:CDS |
| CTCTTCAACAATCACAACAC+CGG | 0.618190 | 8_3:-35890884 | None:intergenic |
| TTGTATGCAAAGAGAGGCAG+TGG | 0.622560 | 8_3:+35889888 | Msa1286970:CDS |
| GGCACATTGGGATTTGTACG+GGG | 0.624183 | 8_3:+35889690 | Msa1286970:CDS |
| ATCCCAATGTGCCGTCAACA+GGG | 0.626643 | 8_3:-35889680 | None:intergenic |
| AGAGAGGCAGTGGTGAGGCG+TGG | 0.628860 | 8_3:+35889898 | Msa1286970:CDS |
| TGTTGAAGAGGCCGGTGGTG+TGG | 0.638056 | 8_3:+35890897 | Msa1286970:CDS |
| CCTTTGAAAAGTCTAGAGGT+CGG | 0.639579 | 8_3:-35890936 | None:intergenic |
| GGCATCGGTTACCACACCAC+CGG | 0.647173 | 8_3:-35890908 | None:intergenic |
| GTTCCCTTTGAAAAGTCTAG+AGG | 0.652497 | 8_3:-35890940 | None:intergenic |
| AGCTGTGAGGATTGTCCACG+TGG | 0.653121 | 8_3:+35885818 | Msa1286970:CDS |
| TGCAAAGAGAGGCAGTGGTG+AGG | 0.660835 | 8_3:+35889893 | Msa1286970:CDS |
| TCAACAACTCTTGATGCATG+CGG | 0.662013 | 8_3:+35889852 | Msa1286970:CDS |
| CACACAGAGCACATGCCACG+TGG | 0.669994 | 8_3:-35885833 | None:intergenic |
| TACTTAGAGGGTCTTGACCG+AGG | 0.675960 | 8_3:+35890964 | Msa1286970:CDS |
| AAGTATGCAGCAATAGCAAG+GGG | 0.677278 | 8_3:+35890796 | Msa1286970:CDS |
| GTGATTGTTGAAGAGGCCGG+TGG | 0.685575 | 8_3:+35890892 | Msa1286970:CDS |
| GGTGTGGTAACCGATGCCGG+AGG | 0.697260 | 8_3:+35890913 | Msa1286970:CDS |
| GAGAATTAGAGATAGCTGTG+AGG | 0.704747 | 8_3:+35885805 | Msa1286970:CDS |
| TGGGACATCAGAAGTTCTCG+CGG | 0.708580 | 8_3:+35889602 | Msa1286970:CDS |
| AGATGTAGAAACTTTCACCA+AGG | 0.717876 | 8_3:+35889482 | Msa1286970:CDS |
| TGTGTGTTGTATGCAAAGAG+AGG | 0.730469 | 8_3:+35889882 | Msa1286970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATTGAATGATAAAA+TGG | + | chr8_3:35887745-35887764 | Msa1286970:intron | 10.0% |
| !! | ATATTATTGAATGATAAAAT+GGG | + | chr8_3:35887746-35887765 | Msa1286970:intron | 10.0% |
| !!! | TTTGATTTTTTTTTTTTTTG+AGG | + | chr8_3:35888700-35888719 | Msa1286970:intron | 10.0% |
| !!! | TTGATTTTTTTTTTTTTTGA+GGG | + | chr8_3:35888701-35888720 | Msa1286970:intron | 10.0% |
| !!! | CAGTTTTTTTTTTTTTTTTA+GGG | - | chr8_3:35890495-35890514 | None:intergenic | 10.0% |
| !! | CTAAAAAAAAAAAAAAAACT+GGG | + | chr8_3:35890494-35890513 | Msa1286970:intron | 10.0% |
| !!! | TCAATCTTAATCTTTATTTA+TGG | + | chr8_3:35885939-35885958 | Msa1286970:intron | 15.0% |
| !! | TAACAAAGATAAAAAATAGA+TGG | - | chr8_3:35887019-35887038 | None:intergenic | 15.0% |
| !! | TATTATTGAATGATAAAATG+GGG | + | chr8_3:35887747-35887766 | Msa1286970:intron | 15.0% |
| !! | AAAATTCAAATTATGTCAAT+GGG | - | chr8_3:35888109-35888128 | None:intergenic | 15.0% |
| !! | AAAAATTCAAATTATGTCAA+TGG | - | chr8_3:35888110-35888129 | None:intergenic | 15.0% |
| !! | AAAATTTATTAAGATGACAA+TGG | + | chr8_3:35888896-35888915 | Msa1286970:intron | 15.0% |
| !!! | AATTATTGGTTTTATCTTTA+AGG | + | chr8_3:35889064-35889083 | Msa1286970:intron | 15.0% |
| !!! | TACTAGATATTTTTGTTTTT+CGG | + | chr8_3:35889327-35889346 | Msa1286970:intron | 15.0% |
| !!! | TATGTATAATTTTAGTTGTA+CGG | - | chr8_3:35890413-35890432 | None:intergenic | 15.0% |
| !!! | CCAGTTTTTTTTTTTTTTTT+AGG | - | chr8_3:35890496-35890515 | None:intergenic | 15.0% |
| !! | CCTAAAAAAAAAAAAAAAAC+TGG | + | chr8_3:35890493-35890512 | Msa1286970:intron | 15.0% |
| !!! | AATAAACTTAGATTATGTTT+TGG | - | chr8_3:35890658-35890677 | None:intergenic | 15.0% |
| !!! | TAATTTTTCAGTATAATCAT+TGG | + | chr8_3:35891114-35891133 | Msa1286970:three_prime_UTR | 15.0% |
| !!! | CATAATTTGTTTTCGTTTAT+TGG | + | chr8_3:35885974-35885993 | Msa1286970:intron | 20.0% |
| !!! | TGGAATAATTTCAAGTTTTA+AGG | + | chr8_3:35886396-35886415 | Msa1286970:intron | 20.0% |
| !!! | GGAATAATTTCAAGTTTTAA+GGG | + | chr8_3:35886397-35886416 | Msa1286970:intron | 20.0% |
| !! | CTTAGATAGTTAGAATTAAA+AGG | - | chr8_3:35886496-35886515 | None:intergenic | 20.0% |
| !! | ACACAAGATTGATTATTATA+GGG | - | chr8_3:35886737-35886756 | None:intergenic | 20.0% |
| !! | AACACAAGATTGATTATTAT+AGG | - | chr8_3:35886738-35886757 | None:intergenic | 20.0% |
| !!! | TTCTTCAAAATTGAGATTTT+AGG | - | chr8_3:35886765-35886784 | None:intergenic | 20.0% |
| !! | ATCAATCTAGTTAAGTATTA+TGG | + | chr8_3:35886820-35886839 | Msa1286970:intron | 20.0% |
| !! | ATTAGGATAATGTATATGTA+TGG | + | chr8_3:35887228-35887247 | Msa1286970:intron | 20.0% |
| !! | TTAGGATAATGTATATGTAT+GGG | + | chr8_3:35887229-35887248 | Msa1286970:intron | 20.0% |
| !!! | TGATTTATGTGTAACTTTTA+CGG | - | chr8_3:35887631-35887650 | None:intergenic | 20.0% |
| !! | GGGAATATTATGTTATAAAA+GGG | - | chr8_3:35887923-35887942 | None:intergenic | 20.0% |
| !! | AGGGAATATTATGTTATAAA+AGG | - | chr8_3:35887924-35887943 | None:intergenic | 20.0% |
| !! | ATCATAAAATTCATTCAAGA+AGG | + | chr8_3:35888212-35888231 | Msa1286970:intron | 20.0% |
| !!! | TTGTGTTATTTTAGATAGAA+AGG | + | chr8_3:35888262-35888281 | Msa1286970:intron | 20.0% |
| !! | TAAGATCTACATTATTGTAT+AGG | + | chr8_3:35888323-35888342 | Msa1286970:intron | 20.0% |
| !! | TAAATCAAAATACTTCTCAA+CGG | - | chr8_3:35888630-35888649 | None:intergenic | 20.0% |
| !!! | GAGAAGTATTTTGATTTAAA+TGG | + | chr8_3:35888632-35888651 | Msa1286970:intron | 20.0% |
| !!! | AAGTCTTTTCTCATTAAATA+AGG | - | chr8_3:35888753-35888772 | None:intergenic | 20.0% |
| !! | TTATTTAATGAGAAAAGACT+TGG | + | chr8_3:35888752-35888771 | Msa1286970:intron | 20.0% |
| !! | TATTTAATGAGAAAAGACTT+GGG | + | chr8_3:35888753-35888772 | Msa1286970:intron | 20.0% |
| !! | ATGTACCAATTACATATAAA+AGG | + | chr8_3:35888823-35888842 | Msa1286970:intron | 20.0% |
| !! | TGTACCAATTACATATAAAA+GGG | + | chr8_3:35888824-35888843 | Msa1286970:intron | 20.0% |
| !!! | TCACTTTTATTGAGTATATA+TGG | + | chr8_3:35889131-35889150 | Msa1286970:intron | 20.0% |
| !! | TTAATTATTGTACTTTCGAT+AGG | + | chr8_3:35890458-35890477 | Msa1286970:intron | 20.0% |
| ! | GATAGTTAGAATTAAAAGGA+AGG | - | chr8_3:35886492-35886511 | None:intergenic | 25.0% |
| ! | ACTTTACAAAATGCTTATGA+CGG | - | chr8_3:35886610-35886629 | None:intergenic | 25.0% |
| ! | CACAAGATTGATTATTATAG+GGG | - | chr8_3:35886736-35886755 | None:intergenic | 25.0% |
| !!! | AATCTCAATTTTGAAGAAGT+TGG | + | chr8_3:35886767-35886786 | Msa1286970:intron | 25.0% |
| !! | ATAGTGTGATACATTCATTT+TGG | + | chr8_3:35886943-35886962 | Msa1286970:intron | 25.0% |
| !! | TAGTGTGATACATTCATTTT+GGG | + | chr8_3:35886944-35886963 | Msa1286970:intron | 25.0% |
| !! | TCTTATGGACTTACTATTTT+TGG | - | chr8_3:35887074-35887093 | None:intergenic | 25.0% |
| ! | ATCTACAAATGAAGTAGTTA+TGG | - | chr8_3:35887159-35887178 | None:intergenic | 25.0% |
| ! | TCTTAAAAGCTTAAGCTATT+AGG | + | chr8_3:35887211-35887230 | Msa1286970:intron | 25.0% |
| ! | TACAATCTGTAATTGTGAAA+TGG | + | chr8_3:35887328-35887347 | Msa1286970:intron | 25.0% |
| !! | GTTCGTTATCTTGATTTTAT+GGG | - | chr8_3:35887723-35887742 | None:intergenic | 25.0% |
| !! | AGTTCGTTATCTTGATTTTA+TGG | - | chr8_3:35887724-35887743 | None:intergenic | 25.0% |
| ! | CATAATATTCCCTAAAATCA+AGG | + | chr8_3:35887931-35887950 | Msa1286970:intron | 25.0% |
| ! | TAGAAGATTGTAGAAACATA+GGG | - | chr8_3:35887979-35887998 | None:intergenic | 25.0% |
| ! | TTCATGATGCAATTAATTGT+AGG | + | chr8_3:35888043-35888062 | Msa1286970:intron | 25.0% |
| ! | TGTCATATGGTTAAATGTAT+TGG | + | chr8_3:35888148-35888167 | Msa1286970:intron | 25.0% |
| ! | GTCATATGGTTAAATGTATT+GGG | + | chr8_3:35888149-35888168 | Msa1286970:intron | 25.0% |
| ! | TAAAATTCATTCAAGAAGGA+TGG | + | chr8_3:35888216-35888235 | Msa1286970:intron | 25.0% |
| ! | TATTGTATAGGATTAACTGT+TGG | + | chr8_3:35888335-35888354 | Msa1286970:intron | 25.0% |
| ! | TAATAGATGAGTTATACACT+AGG | + | chr8_3:35888412-35888431 | Msa1286970:intron | 25.0% |
| ! | AACACCTATGATAGAAAATA+TGG | + | chr8_3:35888474-35888493 | Msa1286970:intron | 25.0% |
| !!! | TTCATTTTGCTGTTAGAATT+TGG | + | chr8_3:35888854-35888873 | Msa1286970:intron | 25.0% |
| ! | TGATGTTCAGTAACTAATAA+TGG | - | chr8_3:35889018-35889037 | None:intergenic | 25.0% |
| ! | TGAAATACTAAAAACACTAC+AGG | - | chr8_3:35889114-35889133 | None:intergenic | 25.0% |
| ! | AAAAAAGGTTAAGAAATCGA+AGG | - | chr8_3:35889202-35889221 | None:intergenic | 25.0% |
| ! | ACATTTATAAGCGAGAAAAA+AGG | - | chr8_3:35889217-35889236 | None:intergenic | 25.0% |
| ! | GAAACTAGTGATATTAGAAA+TGG | + | chr8_3:35889242-35889261 | Msa1286970:intron | 25.0% |
| ! | AATTTCAGAGAATACAGATT+AGG | - | chr8_3:35890617-35890636 | None:intergenic | 25.0% |
| ! | TGCAAATTTCATGAATATCT+CGG | - | chr8_3:35890827-35890846 | None:intergenic | 25.0% |
| ! | AGGTTACAAAGAAAAGATAT+GGG | + | chr8_3:35890852-35890871 | Msa1286970:CDS | 25.0% |
| ! | AAAAAAGCCTCATAAATTTG+AGG | - | chr8_3:35891058-35891077 | None:intergenic | 25.0% |
| !! | TTGTTTTCGTTTATTGGTTG+TGG | + | chr8_3:35885980-35885999 | Msa1286970:intron | 30.0% |
| !! | TGTTTTCGTTTATTGGTTGT+GGG | + | chr8_3:35885981-35886000 | Msa1286970:intron | 30.0% |
| ACATATGAATCTGATCCATA+AGG | - | chr8_3:35886076-35886095 | None:intergenic | 30.0% | |
| TCACAAGTGTTTATGTTAGT+AGG | + | chr8_3:35886300-35886319 | Msa1286970:intron | 30.0% | |
| CGTGAATGATTCTCTAATAT+GGG | - | chr8_3:35886354-35886373 | None:intergenic | 30.0% | |
| ACGTGAATGATTCTCTAATA+TGG | - | chr8_3:35886355-35886374 | None:intergenic | 30.0% | |
| ! | TTGCAAATCTCTTTTGCTTT+TGG | + | chr8_3:35886376-35886395 | Msa1286970:intron | 30.0% |
| CTTTACAAAATGCTTATGAC+GGG | - | chr8_3:35886609-35886628 | None:intergenic | 30.0% | |
| ATTGATTATTATAGGGGCTT+GGG | - | chr8_3:35886730-35886749 | None:intergenic | 30.0% | |
| ! | AATCAGCTGAAGTCTAAAAT+TGG | + | chr8_3:35886874-35886893 | Msa1286970:intron | 30.0% |
| ! | ATCAGCTGAAGTCTAAAATT+GGG | + | chr8_3:35886875-35886894 | Msa1286970:intron | 30.0% |
| ! | AGTGTGATACATTCATTTTG+GGG | + | chr8_3:35886945-35886964 | Msa1286970:intron | 30.0% |
| CAAACCAATGTCGAATATTA+TGG | - | chr8_3:35886971-35886990 | None:intergenic | 30.0% | |
| ! | CATAATATTCGACATTGGTT+TGG | + | chr8_3:35886969-35886988 | Msa1286970:intron | 30.0% |
| ! | ATTTTGTCAAAGATCCCTTT+TGG | + | chr8_3:35887113-35887132 | Msa1286970:intron | 30.0% |
| AATCTGTAATTGTGAAATGG+TGG | + | chr8_3:35887331-35887350 | Msa1286970:intron | 30.0% | |
| CAAGAAATGCATCATATAGA+CGG | - | chr8_3:35887405-35887424 | None:intergenic | 30.0% | |
| !!! | CCTTGACCTTATTTTAAAAC+CGG | + | chr8_3:35887443-35887462 | Msa1286970:intron | 30.0% |
| ! | TGGCATATCCAACATTTTAA+TGG | + | chr8_3:35887515-35887534 | Msa1286970:intron | 30.0% |
| !! | TATCCAACATTTTAATGGAC+AGG | + | chr8_3:35887520-35887539 | Msa1286970:intron | 30.0% |
| TTTCCTGTCCATTAAAATGT+TGG | - | chr8_3:35887526-35887545 | None:intergenic | 30.0% | |
| TAATTAAGAGAGTTTCTCTC+TGG | - | chr8_3:35887858-35887877 | None:intergenic | 30.0% | |
| ATGTTATAAAAGGGAGTGAA+GGG | - | chr8_3:35887914-35887933 | None:intergenic | 30.0% | |
| TATGTTATAAAAGGGAGTGA+AGG | - | chr8_3:35887915-35887934 | None:intergenic | 30.0% | |
| ! | TAGCACTTTCCTTGATTTTA+GGG | - | chr8_3:35887943-35887962 | None:intergenic | 30.0% |
| ! | TTAGCACTTTCCTTGATTTT+AGG | - | chr8_3:35887944-35887963 | None:intergenic | 30.0% |
| CTAGAAGATTGTAGAAACAT+AGG | - | chr8_3:35887980-35887999 | None:intergenic | 30.0% | |
| ACAGTACAAAAACTGTCATA+TGG | + | chr8_3:35888135-35888154 | Msa1286970:intron | 30.0% | |
| CTATTACAACTGTTTCATCT+GGG | - | chr8_3:35888398-35888417 | None:intergenic | 30.0% | |
| TCTATTACAACTGTTTCATC+TGG | - | chr8_3:35888399-35888418 | None:intergenic | 30.0% | |
| CCTATGATAGAAAATATGGA+CGG | + | chr8_3:35888478-35888497 | Msa1286970:intron | 30.0% | |
| TTTGGTCTATCATCTATACT+GGG | - | chr8_3:35888547-35888566 | None:intergenic | 30.0% | |
| ATTTGGTCTATCATCTATAC+TGG | - | chr8_3:35888548-35888567 | None:intergenic | 30.0% | |
| ATAGATGATAGACCAAATAG+AGG | + | chr8_3:35888550-35888569 | Msa1286970:intron | 30.0% | |
| TCATTAGACTATCCTCTATT+TGG | - | chr8_3:35888565-35888584 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTTGAGGGAAGAG+CGG | + | chr8_3:35888709-35888728 | Msa1286970:intron | 30.0% |
| ! | GCTACCCTTTTATATGTAAT+TGG | - | chr8_3:35888831-35888850 | None:intergenic | 30.0% |
| TTGGTATGATAACTTTGCAA+AGG | + | chr8_3:35888873-35888892 | Msa1286970:intron | 30.0% | |
| !! | GTGTCTTTTCTTACTTTTCA+TGG | + | chr8_3:35888955-35888974 | Msa1286970:intron | 30.0% |
| ! | ATGGTAACAATGTCTCTTTT+TGG | + | chr8_3:35888988-35889007 | Msa1286970:intron | 30.0% |
| !! | CTTTAAGGTCAATATGAAAC+TGG | + | chr8_3:35889079-35889098 | Msa1286970:intron | 30.0% |
| TTCTCGCTTATAAATGTGAA+TGG | + | chr8_3:35889220-35889239 | Msa1286970:intron | 30.0% | |
| TGGTTACTATCGAAAACATT+TGG | + | chr8_3:35889429-35889448 | Msa1286970:CDS | 30.0% | |
| GGTTACTATCGAAAACATTT+GGG | + | chr8_3:35889430-35889449 | Msa1286970:CDS | 30.0% | |
| GTTACTATCGAAAACATTTG+GGG | + | chr8_3:35889431-35889450 | Msa1286970:CDS | 30.0% | |
| ! | ATATCGTTGTTTGATGATAC+TGG | - | chr8_3:35889824-35889843 | None:intergenic | 30.0% |
| !! | AGTGTCTTGTTTGAAGATTA+AGG | + | chr8_3:35890210-35890229 | Msa1286970:intron | 30.0% |
| TACGCACTTATATCAATAAG+TGG | - | chr8_3:35890253-35890272 | None:intergenic | 30.0% | |
| TACTTTCGATAGGAACAATA+TGG | + | chr8_3:35890468-35890487 | Msa1286970:intron | 30.0% | |
| TTTGGAAGATAGTGTAAACA+AGG | - | chr8_3:35890640-35890659 | None:intergenic | 30.0% | |
| ! | AATTCCAACAATGGTGTTAA+AGG | - | chr8_3:35890713-35890732 | None:intergenic | 30.0% |
| TTCATGAAATTTGCAAAGTC+AGG | + | chr8_3:35890832-35890851 | Msa1286970:CDS | 30.0% | |
| CAGGTTACAAAGAAAAGATA+TGG | + | chr8_3:35890851-35890870 | Msa1286970:CDS | 30.0% | |
| AAAAAACCTGCAACAGTAAC+AGG | - | chr8_3:35885915-35885934 | None:intergenic | 35.0% | |
| CAAAATGTGCTATAGCCTAT+AGG | + | chr8_3:35886040-35886059 | Msa1286970:intron | 35.0% | |
| TATGAATCTGATCCATAAGG+CGG | - | chr8_3:35886073-35886092 | None:intergenic | 35.0% | |
| TGGATCAGATTCATATGTGA+TGG | + | chr8_3:35886078-35886097 | Msa1286970:intron | 35.0% | |
| GGATCAGATTCATATGTGAT+GGG | + | chr8_3:35886079-35886098 | Msa1286970:intron | 35.0% | |
| GAAAGGAAATAGCAAAATCC+TGG | + | chr8_3:35886186-35886205 | Msa1286970:intron | 35.0% | |
| TTAAATCCATGGTAGAATCC+AGG | - | chr8_3:35886207-35886226 | None:intergenic | 35.0% | |
| CCTTCAACAACTTAAATCCA+TGG | - | chr8_3:35886218-35886237 | None:intergenic | 35.0% | |
| !! | CCATGGATTTAAGTTGTTGA+AGG | + | chr8_3:35886215-35886234 | Msa1286970:intron | 35.0% |
| CGACTTAAATCCTAAAATCC+AGG | - | chr8_3:35886259-35886278 | None:intergenic | 35.0% | |
| !! | GACTTGTTAGAGATGTGATA+CGG | + | chr8_3:35886436-35886455 | Msa1286970:intron | 35.0% |
| TATAAGTATCCAAGCTAGTG+AGG | + | chr8_3:35886464-35886483 | Msa1286970:intron | 35.0% | |
| !! | TTAATTAGCGCTGGTAGTAT+GGG | - | chr8_3:35886547-35886566 | None:intergenic | 35.0% |
| !! | ATTAATTAGCGCTGGTAGTA+TGG | - | chr8_3:35886548-35886567 | None:intergenic | 35.0% |
| ATACTACCAGCGCTAATTAA+TGG | + | chr8_3:35886547-35886566 | Msa1286970:intron | 35.0% | |
| ATATGCAGTCATGTAGATGA+AGG | - | chr8_3:35886675-35886694 | None:intergenic | 35.0% | |
| GATTGATTATTATAGGGGCT+TGG | - | chr8_3:35886731-35886750 | None:intergenic | 35.0% | |
| GCATTGCATGTGTATTCTTA+TGG | - | chr8_3:35887089-35887108 | None:intergenic | 35.0% | |
| GATCAATCTTCAGTCCAAAA+GGG | - | chr8_3:35887130-35887149 | None:intergenic | 35.0% | |
| TGATCAATCTTCAGTCCAAA+AGG | - | chr8_3:35887131-35887150 | None:intergenic | 35.0% | |
| !!! | CCGGTTTTAAAATAAGGTCA+AGG | - | chr8_3:35887446-35887465 | None:intergenic | 35.0% |
| !!! | CCAGTTCCGGTTTTAAAATA+AGG | - | chr8_3:35887452-35887471 | None:intergenic | 35.0% |
| !!! | CCTTATTTTAAAACCGGAAC+TGG | + | chr8_3:35887449-35887468 | Msa1286970:intron | 35.0% |
| GATGTTCTTATACCGACATA+AGG | + | chr8_3:35887484-35887503 | Msa1286970:intron | 35.0% | |
| ! | CAAGACAGGAGAATTCTTTT+GGG | - | chr8_3:35887659-35887678 | None:intergenic | 35.0% |
| !! | GAACCAAGCATTGAATTTGA+TGG | + | chr8_3:35887695-35887714 | Msa1286970:intron | 35.0% |
| GTTCCATCAAATTCAATGCT+TGG | - | chr8_3:35887701-35887720 | None:intergenic | 35.0% | |
| ATCTAGATACATTCAGCTAC+TGG | - | chr8_3:35888080-35888099 | None:intergenic | 35.0% | |
| GGTTCATCATGCAAAATAAC+AGG | + | chr8_3:35888170-35888189 | Msa1286970:intron | 35.0% | |
| TGTTTCATCTGGGCAATATT+GGG | - | chr8_3:35888388-35888407 | None:intergenic | 35.0% | |
| AGATGAGTTATACACTAGGT+AGG | + | chr8_3:35888416-35888435 | Msa1286970:intron | 35.0% | |
| GTTATACACTAGGTAGGAAA+AGG | + | chr8_3:35888422-35888441 | Msa1286970:intron | 35.0% | |
| AAAACACTAGAGAGAAAGTC+AGG | + | chr8_3:35888449-35888468 | Msa1286970:intron | 35.0% | |
| AAACACTAGAGAGAAAGTCA+GGG | + | chr8_3:35888450-35888469 | Msa1286970:intron | 35.0% | |
| ! | CCGTCCATATTTTCTATCAT+AGG | - | chr8_3:35888481-35888500 | None:intergenic | 35.0% |
| GAGGATAGTCTAATGATTAG+AGG | + | chr8_3:35888569-35888588 | Msa1286970:intron | 35.0% | |
| CAAAATACTTCTCAACGGTT+TGG | - | chr8_3:35888625-35888644 | None:intergenic | 35.0% | |
| TTCATGACAAGACATTAGAG+CGG | + | chr8_3:35888672-35888691 | Msa1286970:intron | 35.0% | |
| AGCGGTTTCATTTGATTAAC+AGG | + | chr8_3:35888727-35888746 | Msa1286970:intron | 35.0% | |
| ! | TGGTTTGTAATTTCCTCTCT+TGG | + | chr8_3:35888916-35888935 | Msa1286970:intron | 35.0% |
| GAGACATTGTTACCATGAAT+GGG | - | chr8_3:35888984-35889003 | None:intergenic | 35.0% | |
| AGAGACATTGTTACCATGAA+TGG | - | chr8_3:35888985-35889004 | None:intergenic | 35.0% | |
| ACCTCGATACTCTCAATTAT+TGG | + | chr8_3:35889050-35889069 | Msa1286970:intron | 35.0% | |
| !! | ACCAATAATTGAGAGTATCG+AGG | - | chr8_3:35889054-35889073 | None:intergenic | 35.0% |
| TCAGAATGTGTCAATTGTTG+CGG | + | chr8_3:35889455-35889474 | Msa1286970:CDS | 35.0% | |
| AGATGTAGAAACTTTCACCA+AGG | + | chr8_3:35889482-35889501 | Msa1286970:CDS | 35.0% | |
| !! | TTAGCTTTTGCATCCATGTA+TGG | + | chr8_3:35889555-35889574 | Msa1286970:CDS | 35.0% |
| AAAGTCCAGACATAACTCTT+GGG | + | chr8_3:35889583-35889602 | Msa1286970:CDS | 35.0% | |
| AAAGTTGTTCTTGGAGTTCT+TGG | + | chr8_3:35889753-35889772 | Msa1286970:CDS | 35.0% | |
| AAGTTGTTCTTGGAGTTCTT+GGG | + | chr8_3:35889754-35889773 | Msa1286970:CDS | 35.0% | |
| TCAATGGAAGAAACTCGAAT+AGG | - | chr8_3:35889978-35889997 | None:intergenic | 35.0% | |
| ! | AGTTTCTTCCATTGATGATC+CGG | + | chr8_3:35889983-35890002 | Msa1286970:CDS | 35.0% |
| TACAGTTGCAGAACAATTGA+CGG | - | chr8_3:35890118-35890137 | None:intergenic | 35.0% | |
| CTTTCATATCTACTGGACAT+AGG | + | chr8_3:35890521-35890540 | Msa1286970:intron | 35.0% | |
| CATAGGAAGCTATGAAAGAT+AGG | + | chr8_3:35890538-35890557 | Msa1286970:intron | 35.0% | |
| AAAGATAGGAATCATAGACC+AGG | + | chr8_3:35890552-35890571 | Msa1286970:intron | 35.0% | |
| AGATTACAATTGCCTAGCAA+AGG | - | chr8_3:35890584-35890603 | None:intergenic | 35.0% | |
| TCTTCCTTTAACACCATTGT+TGG | + | chr8_3:35890706-35890725 | Msa1286970:intron | 35.0% | |
| GAGCATTTCAATTCCAACAA+TGG | - | chr8_3:35890722-35890741 | None:intergenic | 35.0% | |
| TAAAGTATGCAGCAATAGCA+AGG | + | chr8_3:35890794-35890813 | Msa1286970:CDS | 35.0% | |
| AAAGTATGCAGCAATAGCAA+GGG | + | chr8_3:35890795-35890814 | Msa1286970:CDS | 35.0% | |
| ! | GTGATGGAGGGTGAAAAATA+CGG | + | chr8_3:35885780-35885799 | Msa1286970:exon | 40.0% |
| GAGAATTAGAGATAGCTGTG+AGG | + | chr8_3:35885805-35885824 | Msa1286970:CDS | 40.0% | |
| AACAGGAGAATCATCATCCT+TGG | - | chr8_3:35885898-35885917 | None:intergenic | 40.0% | |
| ! | CAACCTTGGTGACAATGTTT+GGG | - | chr8_3:35886141-35886160 | None:intergenic | 40.0% |
| ! | ACAACCTTGGTGACAATGTT+TGG | - | chr8_3:35886142-35886161 | None:intergenic | 40.0% |
| GTCACCAAGGTTGTCAAAAT+CGG | + | chr8_3:35886148-35886167 | Msa1286970:intron | 40.0% | |
| TCACCAAGGTTGTCAAAATC+GGG | + | chr8_3:35886149-35886168 | Msa1286970:intron | 40.0% | |
| TCAAAATCGGGACTTACTTC+AGG | + | chr8_3:35886161-35886180 | Msa1286970:intron | 40.0% | |
| CAAAATCCTGGATTCTACCA+TGG | + | chr8_3:35886198-35886217 | Msa1286970:intron | 40.0% | |
| TGAAGAAAGTCGCAAAATCC+TGG | + | chr8_3:35886238-35886257 | Msa1286970:intron | 40.0% | |
| ! | GTCGCAAAATCCTGGATTTT+AGG | + | chr8_3:35886246-35886265 | Msa1286970:intron | 40.0% |
| TAAGGGCTATATAGCATGAG+AGG | + | chr8_3:35886414-35886433 | Msa1286970:intron | 40.0% | |
| CTAATTAATGGCAGCCATGA+TGG | + | chr8_3:35886559-35886578 | Msa1286970:intron | 40.0% | |
| TGACTGCATATCACTCAATG+TGG | + | chr8_3:35886684-35886703 | Msa1286970:intron | 40.0% | |
| GACTGCATATCACTCAATGT+GGG | + | chr8_3:35886685-35886704 | Msa1286970:intron | 40.0% | |
| ACTGCATATCACTCAATGTG+GGG | + | chr8_3:35886686-35886705 | Msa1286970:intron | 40.0% | |
| TTATAGGGGCTTGGGTATAA+TGG | - | chr8_3:35886722-35886741 | None:intergenic | 40.0% | |
| TACAGATGTAATGTACCTGC+AGG | + | chr8_3:35887290-35887309 | Msa1286970:intron | 40.0% | |
| TAACTAGTGATATCACCTGC+AGG | - | chr8_3:35887308-35887327 | None:intergenic | 40.0% | |
| GTGTACGGTTATAGTAGTTG+TGG | - | chr8_3:35887383-35887402 | None:intergenic | 40.0% | |
| TGCATCATATAGACGGTGTA+CGG | - | chr8_3:35887398-35887417 | None:intergenic | 40.0% | |
| TGATGCATTTCTTGCATCAC+AGG | + | chr8_3:35887411-35887430 | Msa1286970:intron | 40.0% | |
| CATATATCTCTCACCAGTTC+CGG | - | chr8_3:35887465-35887484 | None:intergenic | 40.0% | |
| ! | CCAAGACAGGAGAATTCTTT+TGG | - | chr8_3:35887660-35887679 | None:intergenic | 40.0% |
| CCAAAAGAATTCTCCTGTCT+TGG | + | chr8_3:35887657-35887676 | Msa1286970:intron | 40.0% | |
| ACACAGAAATCATCCAAGAC+AGG | - | chr8_3:35887673-35887692 | None:intergenic | 40.0% | |
| GTCTTGGATGATTTCTGTGT+TGG | + | chr8_3:35887673-35887692 | Msa1286970:intron | 40.0% | |
| !! | GCTTTAGAGCTCTACAATGA+TGG | + | chr8_3:35887771-35887790 | Msa1286970:intron | 40.0% |
| AAGAGAGTTTCTCTCTGGTT+AGG | - | chr8_3:35887853-35887872 | None:intergenic | 40.0% | |
| GCTGAATGTATCTAGATGCT+TGG | + | chr8_3:35888083-35888102 | Msa1286970:intron | 40.0% | |
| TAACAGGTAGATAGAGAGAG+AGG | + | chr8_3:35888186-35888205 | Msa1286970:intron | 40.0% | |
| CAAGAAGGATGGAATAGAAG+TGG | + | chr8_3:35888227-35888246 | Msa1286970:intron | 40.0% | |
| CTGTTTCATCTGGGCAATAT+TGG | - | chr8_3:35888389-35888408 | None:intergenic | 40.0% | |
| GAGGTAGAGAGATAGACTAA+TGG | + | chr8_3:35888588-35888607 | Msa1286970:intron | 40.0% | |
| AAGACAACAACATCCAAGAG+AGG | - | chr8_3:35888932-35888951 | None:intergenic | 40.0% | |
| ! | TTTTCATGGTCTCCCATTCA+TGG | + | chr8_3:35888969-35888988 | Msa1286970:intron | 40.0% |
| CTTCCTTAGCAATGTCTCTA+TGG | + | chr8_3:35889304-35889323 | Msa1286970:intron | 40.0% | |
| GTACCATAGAGACATTGCTA+AGG | - | chr8_3:35889310-35889329 | None:intergenic | 40.0% | |
| GTGTTCAAGCAATCACTAGT+TGG | + | chr8_3:35889409-35889428 | Msa1286970:CDS | 40.0% | |
| TTCACCAAGGATGATTCAAC+AGG | + | chr8_3:35889495-35889514 | Msa1286970:CDS | 40.0% | |
| TAAGCCTGTTGAATCATCCT+TGG | - | chr8_3:35889502-35889521 | None:intergenic | 40.0% | |
| CAAGAGTTATGTCTGGACTT+TGG | - | chr8_3:35889584-35889603 | None:intergenic | 40.0% | |
| CAAAGTCCAGACATAACTCT+TGG | + | chr8_3:35889582-35889601 | Msa1286970:CDS | 40.0% | |
| GAGGATGGAAAAGTTGTTCT+TGG | + | chr8_3:35889744-35889763 | Msa1286970:CDS | 40.0% | |
| TCTGTCTTCACTGGGTAATT+GGG | - | chr8_3:35889783-35889802 | None:intergenic | 40.0% | |
| TTCTGTCTTCACTGGGTAAT+TGG | - | chr8_3:35889784-35889803 | None:intergenic | 40.0% | |
| ATTACCCAGTGAAGACAGAA+TGG | + | chr8_3:35889784-35889803 | Msa1286970:CDS | 40.0% | |
| TTAGCCATTCTGTCTTCACT+GGG | - | chr8_3:35889791-35889810 | None:intergenic | 40.0% | |
| TTTAGCCATTCTGTCTTCAC+TGG | - | chr8_3:35889792-35889811 | None:intergenic | 40.0% | |
| TCAACAACTCTTGATGCATG+CGG | + | chr8_3:35889852-35889871 | Msa1286970:CDS | 40.0% | |
| TGTGTGTTGTATGCAAAGAG+AGG | + | chr8_3:35889882-35889901 | Msa1286970:CDS | 40.0% | |
| !! | AGTCGTTGATTCCTGAAGAT+AGG | + | chr8_3:35889925-35889944 | Msa1286970:CDS | 40.0% |
| CATTCTAACGTCCTATCTTC+AGG | - | chr8_3:35889939-35889958 | None:intergenic | 40.0% | |
| CTGAAGATAGGACGTTAGAA+TGG | + | chr8_3:35889937-35889956 | Msa1286970:CDS | 40.0% | |
| TAGAATGGCCAAATTGTGCT+AGG | + | chr8_3:35889952-35889971 | Msa1286970:CDS | 40.0% | |
| TCTATGCGAACCAGTAGAAA+GGG | + | chr8_3:35890016-35890035 | Msa1286970:CDS | 40.0% | |
| ! | TTTGAGTTTGCCCTTTCTAC+TGG | - | chr8_3:35890029-35890048 | None:intergenic | 40.0% |
| ACAGTTGCAGAACAATTGAC+GGG | - | chr8_3:35890117-35890136 | None:intergenic | 40.0% | |
| AAGACCCGAGGTAACAAATA+GGG | + | chr8_3:35890386-35890405 | Msa1286970:intron | 40.0% | |
| TACAATTGCCTAGCAAAGGA+AGG | - | chr8_3:35890580-35890599 | None:intergenic | 40.0% | |
| TGCTCTACACTCTCAAAATC+TGG | + | chr8_3:35890737-35890756 | Msa1286970:intron | 40.0% | |
| CTGCATACTTTACCATACTG+TGG | - | chr8_3:35890786-35890805 | None:intergenic | 40.0% | |
| AAGTATGCAGCAATAGCAAG+GGG | + | chr8_3:35890796-35890815 | Msa1286970:CDS | 40.0% | |
| CTCTTCAACAATCACAACAC+CGG | - | chr8_3:35890887-35890906 | None:intergenic | 40.0% | |
| ! | CCTTTGAAAAGTCTAGAGGT+CGG | - | chr8_3:35890939-35890958 | None:intergenic | 40.0% |
| ! | CGACCTCTAGACTTTTCAAA+GGG | + | chr8_3:35890937-35890956 | Msa1286970:CDS | 40.0% |
| ! | GTTCCCTTTGAAAAGTCTAG+AGG | - | chr8_3:35890943-35890962 | None:intergenic | 40.0% |
| TTCAAAGGGAACGTACTTAG+AGG | + | chr8_3:35890951-35890970 | Msa1286970:CDS | 40.0% | |
| TCAAAGGGAACGTACTTAGA+GGG | + | chr8_3:35890952-35890971 | Msa1286970:CDS | 40.0% | |
| ! | TTGATGCTGTTTATGCTAGC+TGG | + | chr8_3:35891028-35891047 | Msa1286970:CDS | 40.0% |
| ! | TGATGCTGTTTATGCTAGCT+GGG | + | chr8_3:35891029-35891048 | Msa1286970:CDS | 40.0% |
| TGGGACTCCTCAAATTTATG+AGG | + | chr8_3:35891048-35891067 | Msa1286970:CDS | 40.0% | |
| GATTCTCCTGTTACTGTTGC+AGG | + | chr8_3:35885906-35885925 | Msa1286970:CDS | 45.0% | |
| TAAGGCGGTGCATTACCTAT+AGG | - | chr8_3:35886058-35886077 | None:intergenic | 45.0% | |
| ATAGGTAATGCACCGCCTTA+TGG | + | chr8_3:35886058-35886077 | Msa1286970:intron | 45.0% | |
| GATCCCAAACATTGTCACCA+AGG | + | chr8_3:35886135-35886154 | Msa1286970:intron | 45.0% | |
| !! | AGTCCCGATTTTGACAACCT+TGG | - | chr8_3:35886155-35886174 | None:intergenic | 45.0% |
| ! | TAATGGCAGCCATGATGGAA+TGG | + | chr8_3:35886564-35886583 | Msa1286970:intron | 45.0% |
| ACCACAATGGCATGTCTGTA+TGG | + | chr8_3:35886640-35886659 | Msa1286970:intron | 45.0% | |
| ACCATACAGACATGCCATTG+TGG | - | chr8_3:35886644-35886663 | None:intergenic | 45.0% | |
| ACAATGGCATGTCTGTATGG+TGG | + | chr8_3:35886643-35886662 | Msa1286970:intron | 45.0% | |
| CAATGGCATGTCTGTATGGT+GGG | + | chr8_3:35886644-35886663 | Msa1286970:intron | 45.0% | |
| ATATCACTCAATGTGGGGCT+TGG | + | chr8_3:35886691-35886710 | Msa1286970:intron | 45.0% | |
| TATCACTCAATGTGGGGCTT+GGG | + | chr8_3:35886692-35886711 | Msa1286970:intron | 45.0% | |
| GGGGCCATAATATTCGACAT+TGG | + | chr8_3:35886964-35886983 | Msa1286970:intron | 45.0% | |
| ACCGACATAAGGATTCAGCT+TGG | + | chr8_3:35887495-35887514 | Msa1286970:intron | 45.0% | |
| GCCAAGCTGAATCCTTATGT+CGG | - | chr8_3:35887499-35887518 | None:intergenic | 45.0% | |
| CAGTCCAGCTGGATAACTAT+GGG | - | chr8_3:35887565-35887584 | None:intergenic | 45.0% | |
| ! | TTATCCAGCTGGACTGGAAT+AGG | + | chr8_3:35887569-35887588 | Msa1286970:intron | 45.0% |
| ATTTCCTATTCCAGTCCAGC+TGG | - | chr8_3:35887576-35887595 | None:intergenic | 45.0% | |
| ATGCCCAAACAAACCAAGAC+GGG | - | chr8_3:35888505-35888524 | None:intergenic | 45.0% | |
| CATGCCCAAACAAACCAAGA+CGG | - | chr8_3:35888506-35888525 | None:intergenic | 45.0% | |
| !! | TTGGTTTGTTTGGGCATGTG+TGG | + | chr8_3:35888508-35888527 | Msa1286970:intron | 45.0% |
| ACCATCACAGACAGTTGTAC+TGG | + | chr8_3:35888792-35888811 | Msa1286970:intron | 45.0% | |
| ACCAGTACAACTGTCTGTGA+TGG | - | chr8_3:35888796-35888815 | None:intergenic | 45.0% | |
| GGATGATTCAACAGGCTTAC+TGG | + | chr8_3:35889503-35889522 | Msa1286970:CDS | 45.0% | |
| ! | TGGACTTTGGAGACCATACA+TGG | - | chr8_3:35889571-35889590 | None:intergenic | 45.0% |
| GATGTCCCAAGAGTTATGTC+TGG | - | chr8_3:35889591-35889610 | None:intergenic | 45.0% | |
| ACGGCACATTGGGATTTGTA+CGG | + | chr8_3:35889688-35889707 | Msa1286970:CDS | 45.0% | |
| !! | GGTTGCTCTAGCTTTGATTG+AGG | + | chr8_3:35889725-35889744 | Msa1286970:CDS | 45.0% |
| !! | GCTCTAGCTTTGATTGAGGA+TGG | + | chr8_3:35889729-35889748 | Msa1286970:CDS | 45.0% |
| ACTCTTGATGCATGCGGAAA+AGG | + | chr8_3:35889858-35889877 | Msa1286970:CDS | 45.0% | |
| TTGTATGCAAAGAGAGGCAG+TGG | + | chr8_3:35889888-35889907 | Msa1286970:CDS | 45.0% | |
| CGAATAGGCCTAGCACAATT+TGG | - | chr8_3:35889963-35889982 | None:intergenic | 45.0% | |
| ! | TTCCATTGATGATCCGGCAT+TGG | + | chr8_3:35889989-35890008 | Msa1286970:CDS | 45.0% |
| CTCTATGCGAACCAGTAGAA+AGG | + | chr8_3:35890015-35890034 | Msa1286970:CDS | 45.0% | |
| TCAAACCATTCCTTCACAGC+TGG | + | chr8_3:35890044-35890063 | Msa1286970:CDS | 45.0% | |
| TTAGTCCTACACTGTGAGCA+AGG | - | chr8_3:35890070-35890089 | None:intergenic | 45.0% | |
| TTGCTCACAGTGTAGGACTA+AGG | + | chr8_3:35890069-35890088 | Msa1286970:CDS | 45.0% | |
| !!! | ACCTCGGGTCTTGTTTTGAT+AGG | - | chr8_3:35890378-35890397 | None:intergenic | 45.0% |
| CAAGACCCGAGGTAACAAAT+AGG | + | chr8_3:35890385-35890404 | Msa1286970:intron | 45.0% | |
| ! | ACGGACCCTATTTGTTACCT+CGG | - | chr8_3:35890394-35890413 | None:intergenic | 45.0% |
| GGGACGACTTTCATATCTAC+TGG | + | chr8_3:35890514-35890533 | Msa1286970:intron | 45.0% | |
| ACCATACTGTGGACACGTAA+GGG | - | chr8_3:35890775-35890794 | None:intergenic | 45.0% | |
| TACCATACTGTGGACACGTA+AGG | - | chr8_3:35890776-35890795 | None:intergenic | 45.0% | |
| AAGATATGGGATCATGCTGC+CGG | + | chr8_3:35890865-35890884 | Msa1286970:CDS | 45.0% | |
| !! | CGGTGTTGTGATTGTTGAAG+AGG | + | chr8_3:35890885-35890904 | Msa1286970:CDS | 45.0% |
| GTTGTGATTGTTGAAGAGGC+CGG | + | chr8_3:35890889-35890908 | Msa1286970:CDS | 45.0% | |
| ! | CCGACCTCTAGACTTTTCAA+AGG | + | chr8_3:35890936-35890955 | Msa1286970:CDS | 45.0% |
| CAGAGCATGCAATTATGCCT+CGG | - | chr8_3:35890984-35891003 | None:intergenic | 45.0% | |
| !! | ATATAATATAATATAATTTC+AGG | + | chr8_3:35890432-35890451 | Msa1286970:intron | 5.0% |
| TTTGCGTCTTGGCTACGTGA+TGG | + | chr8_3:35885764-35885783 | Msa1286970:exon | 50.0% | |
| TGGAAACAACCTCAGTCGCA+AGG | - | chr8_3:35885878-35885897 | None:intergenic | 50.0% | |
| ! | TGCGACTGAGGTTGTTTCCA+AGG | + | chr8_3:35885878-35885897 | Msa1286970:CDS | 50.0% |
| GGGACTTACTTCAGGTCGAA+AGG | + | chr8_3:35886169-35886188 | Msa1286970:intron | 50.0% | |
| AGGAAGGATCCTCACTAGCT+TGG | - | chr8_3:35886476-35886495 | None:intergenic | 50.0% | |
| !! | TTAGCGCTGGTAGTATGGGA+TGG | - | chr8_3:35886543-35886562 | None:intergenic | 50.0% |
| TGGCTGCCATTAATTAGCGC+TGG | - | chr8_3:35886556-35886575 | None:intergenic | 50.0% | |
| AGTGACGATGCAGACCACAA+TGG | + | chr8_3:35886627-35886646 | Msa1286970:intron | 50.0% | |
| !! | GCATGTCTGTATGGTGGGTT+TGG | + | chr8_3:35886649-35886668 | Msa1286970:intron | 50.0% |
| TTCGCCCATAGTTATCCAGC+TGG | + | chr8_3:35887558-35887577 | Msa1286970:intron | 50.0% | |
| CCAGTCCAGCTGGATAACTA+TGG | - | chr8_3:35887566-35887585 | None:intergenic | 50.0% | |
| CCATAGTTATCCAGCTGGAC+TGG | + | chr8_3:35887563-35887582 | Msa1286970:intron | 50.0% | |
| !! | TGGTAGGAGTGTTCACACTC+TGG | - | chr8_3:35887818-35887837 | None:intergenic | 50.0% |
| !! | TAGGAGCATTGTGCTCTGGT+AGG | - | chr8_3:35887834-35887853 | None:intergenic | 50.0% |
| !! | TGGTTAGGAGCATTGTGCTC+TGG | - | chr8_3:35887838-35887857 | None:intergenic | 50.0% |
| AAATATGGACGGTCCCGTCT+TGG | + | chr8_3:35888489-35888508 | Msa1286970:intron | 50.0% | |
| !! | GGTCCCGTCTTGGTTTGTTT+GGG | + | chr8_3:35888499-35888518 | Msa1286970:intron | 50.0% |
| AGGCTTACTGGAAGCTGTTG+TGG | + | chr8_3:35889515-35889534 | Msa1286970:CDS | 50.0% | |
| TGGGACATCAGAAGTTCTCG+CGG | + | chr8_3:35889602-35889621 | Msa1286970:CDS | 50.0% | |
| !! | AGGTGCTAGTGGAAGGCATT+GGG | + | chr8_3:35889650-35889669 | Msa1286970:CDS | 50.0% |
| TGGGTACTTGACCCTGTTGA+CGG | + | chr8_3:35889669-35889688 | Msa1286970:CDS | 50.0% | |
| ATCCCAATGTGCCGTCAACA+GGG | - | chr8_3:35889683-35889702 | None:intergenic | 50.0% | |
| AATCCCAATGTGCCGTCAAC+AGG | - | chr8_3:35889684-35889703 | None:intergenic | 50.0% | |
| CGGCACATTGGGATTTGTAC+GGG | + | chr8_3:35889689-35889708 | Msa1286970:CDS | 50.0% | |
| GGCACATTGGGATTTGTACG+GGG | + | chr8_3:35889690-35889709 | Msa1286970:CDS | 50.0% | |
| TGCCAATGCCGGATCATCAA+TGG | - | chr8_3:35889994-35890013 | None:intergenic | 50.0% | |
| TCGCATAGAGTTGCCAATGC+CGG | - | chr8_3:35890005-35890024 | None:intergenic | 50.0% | |
| GCCTATCAAAACAAGACCCG+AGG | + | chr8_3:35890374-35890393 | Msa1286970:intron | 50.0% | |
| ! | CGGACCCTATTTGTTACCTC+GGG | - | chr8_3:35890393-35890412 | None:intergenic | 50.0% |
| TACTTAGAGGGTCTTGACCG+AGG | + | chr8_3:35890964-35890983 | Msa1286970:CDS | 50.0% | |
| CGAGGCATAATTGCATGCTC+TGG | + | chr8_3:35890982-35891001 | Msa1286970:CDS | 50.0% | |
| ! | CGTCTTGGCTACGTGATGGA+GGG | + | chr8_3:35885768-35885787 | Msa1286970:exon | 55.0% |
| AGCTGTGAGGATTGTCCACG+TGG | + | chr8_3:35885818-35885837 | Msa1286970:CDS | 55.0% | |
| ACGTGGCATGTGCTCTGTGT+GGG | + | chr8_3:35885835-35885854 | Msa1286970:CDS | 55.0% | |
| CGCTGGTAGTATGGGATGGT+CGG | - | chr8_3:35886539-35886558 | None:intergenic | 55.0% | |
| !! | CGGTCCCGTCTTGGTTTGTT+TGG | + | chr8_3:35888498-35888517 | Msa1286970:intron | 55.0% |
| TCAGAAGTTCTCGCGGCCAT+TGG | + | chr8_3:35889609-35889628 | Msa1286970:CDS | 55.0% | |
| ! | GAGGTGCTAGTGGAAGGCAT+TGG | + | chr8_3:35889649-35889668 | Msa1286970:CDS | 55.0% |
| TGACCCTGTTGACGGCACAT+TGG | + | chr8_3:35889677-35889696 | Msa1286970:CDS | 55.0% | |
| GACCCTGTTGACGGCACATT+GGG | + | chr8_3:35889678-35889697 | Msa1286970:CDS | 55.0% | |
| TGTACGGGGCGATCAGTATG+CGG | + | chr8_3:35889704-35889723 | Msa1286970:CDS | 55.0% | |
| TGCAAAGAGAGGCAGTGGTG+AGG | + | chr8_3:35889893-35889912 | Msa1286970:CDS | 55.0% | |
| CAAGGCCAGCTGTGAAGGAA+TGG | - | chr8_3:35890052-35890071 | None:intergenic | 55.0% | |
| ACCAGGCACCTTCCTTTGCT+AGG | + | chr8_3:35890569-35890588 | Msa1286970:intron | 55.0% | |
| GCCCTTACGTGTCCACAGTA+TGG | + | chr8_3:35890771-35890790 | Msa1286970:CDS | 55.0% | |
| GTGATTGTTGAAGAGGCCGG+TGG | + | chr8_3:35890892-35890911 | Msa1286970:CDS | 55.0% | |
| AAAGTCTAGAGGTCGGCCTC+CGG | - | chr8_3:35890932-35890951 | None:intergenic | 55.0% | |
| GCGTCTTGGCTACGTGATGG+AGG | + | chr8_3:35885767-35885786 | Msa1286970:exon | 60.0% | |
| CACACAGAGCACATGCCACG+TGG | - | chr8_3:35885836-35885855 | None:intergenic | 60.0% | |
| CACGTGGCATGTGCTCTGTG+TGG | + | chr8_3:35885834-35885853 | Msa1286970:CDS | 60.0% | |
| TGGCATGTGCTCTGTGTGGG+AGG | + | chr8_3:35885838-35885857 | Msa1286970:CDS | 60.0% | |
| GGCATGTGCTCTGTGTGGGA+GGG | + | chr8_3:35885839-35885858 | Msa1286970:CDS | 60.0% | |
| GGAGAAGCTCCTTGCGACTG+AGG | + | chr8_3:35885866-35885885 | Msa1286970:CDS | 60.0% | |
| ! | GCAGCCATGATGGAATGGCG+TGG | + | chr8_3:35886569-35886588 | Msa1286970:intron | 60.0% |
| ! | GCCATGATGGAATGGCGTGG+CGG | + | chr8_3:35886572-35886591 | Msa1286970:intron | 60.0% |
| ! | CCATGATGGAATGGCGTGGC+GGG | + | chr8_3:35886573-35886592 | Msa1286970:intron | 60.0% |
| CATTGGCCGCTGCAGCTCAA+CGG | + | chr8_3:35889626-35889645 | Msa1286970:CDS | 60.0% | |
| ATTGGCCGCTGCAGCTCAAC+GGG | + | chr8_3:35889627-35889646 | Msa1286970:CDS | 60.0% | |
| !! | AGCTCAACGGGAGGTGCTAG+TGG | + | chr8_3:35889639-35889658 | Msa1286970:CDS | 60.0% |
| !! | CAACGGGAGGTGCTAGTGGA+AGG | + | chr8_3:35889643-35889662 | Msa1286970:CDS | 60.0% |
| GTGAGCAAGGCCAGCTGTGA+AGG | - | chr8_3:35890057-35890076 | None:intergenic | 60.0% | |
| !! | GCTGGCCTTGCTCACAGTGT+AGG | + | chr8_3:35890062-35890081 | Msa1286970:CDS | 60.0% |
| !! | GCCTAGCAAAGGAAGGTGCC+TGG | - | chr8_3:35890573-35890592 | None:intergenic | 60.0% |
| TGTTGAAGAGGCCGGTGGTG+TGG | + | chr8_3:35890897-35890916 | Msa1286970:CDS | 60.0% | |
| !! | GGCATCGGTTACCACACCAC+CGG | - | chr8_3:35890911-35890930 | None:intergenic | 60.0% |
| GGTGGTGTGGTAACCGATGC+CGG | + | chr8_3:35890910-35890929 | Msa1286970:CDS | 60.0% | |
| ! | TGCTCTGTGTGGGAGGGTGC+AGG | + | chr8_3:35885845-35885864 | Msa1286970:CDS | 65.0% |
| CCCGCCACGCCATTCCATCA+TGG | - | chr8_3:35886576-35886595 | None:intergenic | 65.0% | |
| CGTTGAGCTGCAGCGGCCAA+TGG | - | chr8_3:35889628-35889647 | None:intergenic | 65.0% | |
| CACCTCCCGTTGAGCTGCAG+CGG | - | chr8_3:35889635-35889654 | None:intergenic | 65.0% | |
| AGAGAGGCAGTGGTGAGGCG+TGG | + | chr8_3:35889898-35889917 | Msa1286970:CDS | 65.0% | |
| GGTGTGGTAACCGATGCCGG+AGG | + | chr8_3:35890913-35890932 | Msa1286970:CDS | 65.0% | |
| TAGAGGTCGGCCTCCGGCAT+CGG | - | chr8_3:35890926-35890945 | None:intergenic | 65.0% | |
| GGCCGCTGCAGCTCAACGGG+AGG | + | chr8_3:35889630-35889649 | Msa1286970:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 35885755 | 35891177 | 35885755 | ID=Msa1286970;Name=Msa1286970 |
| chr8_3 | mRNA | 35885755 | 35891177 | 35885755 | ID=Msa1286970-mRNA-1;Parent=Msa1286970;Name=Msa1286970-mRNA-1;_AED=0.05;_eAED=0.05;_QI=28|1|1|1|1|1|3|109|378 |
| chr8_3 | exon | 35885755 | 35885927 | 35885755 | ID=Msa1286970-mRNA-1:exon:10571;Parent=Msa1286970-mRNA-1 |
| chr8_3 | exon | 35889403 | 35890090 | 35889403 | ID=Msa1286970-mRNA-1:exon:10572;Parent=Msa1286970-mRNA-1 |
| chr8_3 | exon | 35890765 | 35891177 | 35890765 | ID=Msa1286970-mRNA-1:exon:10573;Parent=Msa1286970-mRNA-1 |
| chr8_3 | five_prime_UTR | 35885755 | 35885782 | 35885755 | ID=Msa1286970-mRNA-1:five_prime_utr;Parent=Msa1286970-mRNA-1 |
| chr8_3 | CDS | 35885783 | 35885927 | 35885783 | ID=Msa1286970-mRNA-1:cds;Parent=Msa1286970-mRNA-1 |
| chr8_3 | CDS | 35889403 | 35890090 | 35889403 | ID=Msa1286970-mRNA-1:cds;Parent=Msa1286970-mRNA-1 |
| chr8_3 | CDS | 35890765 | 35891068 | 35890765 | ID=Msa1286970-mRNA-1:cds;Parent=Msa1286970-mRNA-1 |
| chr8_3 | three_prime_UTR | 35891069 | 35891177 | 35891069 | ID=Msa1286970-mRNA-1:three_prime_utr;Parent=Msa1286970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
