Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873220 | XP_039690880.1 | 89.360 | 1015 | 28 | 4 | 1 | 972 | 1 | 978 | 0.0 | 1799 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873220 | sp|P53536|PHSL_VICFA | 83.808 | 1019 | 100 | 7 | 1 | 971 | 1 | 1002 | 0.0 | 1702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873220 | A0A396HEC4 | 89.261 | 1015 | 28 | 5 | 1 | 972 | 1 | 977 | 0.0 | 1793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047070 | Msa0873220 | 0.825155 | 5.467792e-54 | -8.615850e-47 |
| Msa0051020 | Msa0873220 | 0.801332 | 9.465470e-49 | -8.615850e-47 |
| Msa0608320 | Msa0873220 | 0.827034 | 1.955172e-54 | -8.615850e-47 |
| Msa0615710 | Msa0873220 | 0.806935 | 6.458826e-50 | -8.615850e-47 |
| Msa0626450 | Msa0873220 | 0.814479 | 1.508422e-51 | -8.615850e-47 |
| Msa0626490 | Msa0873220 | 0.816580 | 5.138891e-52 | -8.615850e-47 |
| Msa0642720 | Msa0873220 | 0.808883 | 2.487653e-50 | -8.615850e-47 |
| Msa0643570 | Msa0873220 | 0.831064 | 2.062544e-55 | -8.615850e-47 |
| Msa0658240 | Msa0873220 | 0.818930 | 1.515437e-52 | -8.615850e-47 |
| Msa0664600 | Msa0873220 | 0.816500 | 5.357023e-52 | -8.615850e-47 |
| Msa0725000 | Msa0873220 | 0.833049 | 6.666423e-56 | -8.615850e-47 |
| Msa0725050 | Msa0873220 | 0.813207 | 2.876174e-51 | -8.615850e-47 |
| Msa0765270 | Msa0873220 | 0.828875 | 7.048814e-55 | -8.615850e-47 |
| Msa0825530 | Msa0873220 | 0.824864 | 6.407204e-54 | -8.615850e-47 |
| Msa0124060 | Msa0873220 | 0.802053 | 6.734132e-49 | -8.615850e-47 |
| Msa0168500 | Msa0873220 | 0.809939 | 1.476352e-50 | -8.615850e-47 |
| Msa0225460 | Msa0873220 | 0.823583 | 1.281170e-53 | -8.615850e-47 |
| Msa0225680 | Msa0873220 | 0.854450 | 1.221404e-61 | -8.615850e-47 |
| Msa0386740 | Msa0873220 | 0.811908 | 5.532874e-51 | -8.615850e-47 |
| Msa0391320 | Msa0873220 | 0.837780 | 4.246724e-57 | -8.615850e-47 |
| Msa0410500 | Msa0873220 | 0.803981 | 2.689629e-49 | -8.615850e-47 |
| Msa0422850 | Msa0873220 | 0.815762 | 7.831037e-52 | -8.615850e-47 |
| Msa0422930 | Msa0873220 | 0.815180 | 1.055118e-51 | -8.615850e-47 |
| Msa0428150 | Msa0873220 | 0.854786 | 9.760724e-62 | -8.615850e-47 |
| Msa0442830 | Msa0873220 | 0.826218 | 3.061202e-54 | -8.615850e-47 |
| Msa0462500 | Msa0873220 | 0.843845 | 1.090601e-58 | -8.615850e-47 |
| Msa0255090 | Msa0873220 | 0.816415 | 5.597026e-52 | -8.615850e-47 |
| Msa0259380 | Msa0873220 | 0.816282 | 5.992962e-52 | -8.615850e-47 |
| Msa0267110 | Msa0873220 | 0.809079 | 2.259147e-50 | -8.615850e-47 |
| Msa0292400 | Msa0873220 | 0.809246 | 2.080482e-50 | -8.615850e-47 |
| Msa0294160 | Msa0873220 | 0.814721 | 1.333670e-51 | -8.615850e-47 |
| Msa0318700 | Msa0873220 | 0.826373 | 2.811978e-54 | -8.615850e-47 |
| Msa0485240 | Msa0873220 | 0.806890 | 6.603000e-50 | -8.615850e-47 |
| Msa0507680 | Msa0873220 | 0.804803 | 1.812642e-49 | -8.615850e-47 |
| Msa0523780 | Msa0873220 | 0.804928 | 1.707052e-49 | -8.615850e-47 |
| Msa0524190 | Msa0873220 | 0.804525 | 2.072058e-49 | -8.615850e-47 |
| Msa0532070 | Msa0873220 | 0.802525 | 5.383927e-49 | -8.615850e-47 |
| Msa0576880 | Msa0873220 | 0.806095 | 9.713626e-50 | -8.615850e-47 |
| Msa0602310 | Msa0873220 | 0.814109 | 1.821105e-51 | -8.615850e-47 |
| Msa0602690 | Msa0873220 | 0.816109 | 6.551628e-52 | -8.615850e-47 |
| Msa0844570 | Msa0873220 | 0.817065 | 3.999914e-52 | -8.615850e-47 |
| Msa0845110 | Msa0873220 | 0.833213 | 6.069301e-56 | -8.615850e-47 |
| Msa0869780 | Msa0873220 | 0.806894 | 6.589526e-50 | -8.615850e-47 |
| Msa0873220 | Msa0876190 | 0.800693 | 1.278331e-48 | -8.615850e-47 |
| Msa0873220 | Msa0906610 | 0.964011 | 8.589971e-123 | -8.615850e-47 |
| Msa0873220 | Msa0938480 | 0.982230 | 1.464068e-154 | -8.615850e-47 |
| Msa0873220 | Msa0945110 | 0.844732 | 6.301969e-59 | -8.615850e-47 |
| Msa0873220 | Msa0975640 | 0.981727 | 2.685480e-153 | -8.615850e-47 |
| Msa0873220 | Msa1019000 | 0.806721 | 7.168143e-50 | -8.615850e-47 |
| Msa0873220 | Msa1021210 | 0.818668 | 1.737935e-52 | -8.615850e-47 |
| Msa0873220 | Msa1029250 | 0.823232 | 1.547062e-53 | -8.615850e-47 |
| Msa0873220 | Msa1059960 | 0.857528 | 1.535429e-62 | -8.615850e-47 |
| Msa0873220 | Msa1105160 | 0.852448 | 4.585165e-61 | -8.615850e-47 |
| Msa0873220 | Msa1106700 | 0.813683 | 2.260296e-51 | -8.615850e-47 |
| Msa0873220 | Msa1111130 | 0.821746 | 3.427038e-53 | -8.615850e-47 |
| Msa0873220 | Msa1113340 | 0.811401 | 7.130367e-51 | -8.615850e-47 |
| Msa0873220 | Msa1183120 | 0.818063 | 2.383409e-52 | -8.615850e-47 |
| Msa0873220 | Msa1225700 | 0.859610 | 3.672893e-63 | -8.615850e-47 |
| Msa0873220 | Msa1229500 | 0.836391 | 9.618109e-57 | -8.615850e-47 |
| Msa0873220 | Msa1269480 | 0.829967 | 3.826999e-55 | -8.615850e-47 |
| Msa0873220 | Msa1271990 | 0.811622 | 6.385710e-51 | -8.615850e-47 |
| Msa0873220 | Msa1302830 | 0.800933 | 1.142344e-48 | -8.615850e-47 |
| Msa0873220 | Msa1321330 | 0.828187 | 1.033241e-54 | -8.615850e-47 |
| Msa0873220 | Msa1367370 | 0.810074 | 1.381075e-50 | -8.615850e-47 |
| Msa0873220 | Msa1368500 | 0.806586 | 7.653429e-50 | -8.615850e-47 |
| Msa0873220 | Msa1369550 | 0.847632 | 1.022666e-59 | -8.615850e-47 |
| Msa0873220 | Msa1375560 | 0.802561 | 5.292325e-49 | -8.615850e-47 |
| Msa0873220 | Msa1382560 | 0.800140 | 1.656988e-48 | -8.615850e-47 |
| Msa0873220 | Msa1384650 | 0.842650 | 2.272003e-58 | -8.615850e-47 |
| Msa0873220 | Msa1417420 | 0.825434 | 4.697128e-54 | -8.615850e-47 |
| Msa0873220 | Msa1418240 | 0.818671 | 1.735649e-52 | -8.615850e-47 |
| Msa0873220 | Msa1422420 | 0.840354 | 9.147550e-58 | -8.615850e-47 |
| Msa0873220 | Msa1440960 | 0.813438 | 2.559699e-51 | -8.615850e-47 |
| Msa0873220 | Msa1443110 | 0.801969 | 7.005164e-49 | -8.615850e-47 |
| Msa0873220 | Msa1446950 | 0.826890 | 2.116184e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873220 | MtrunA17_Chr6g0454411 | 89.261 | 1015 | 28 | 5 | 1 | 972 | 1 | 977 | 0.0 | 1793 |
| Msa0873220 | MtrunA17_Chr4g0043041 | 72.591 | 934 | 190 | 4 | 82 | 972 | 71 | 981 | 0.0 | 1383 |
| Msa0873220 | MtrunA17_Chr3g0103771 | 62.347 | 409 | 149 | 1 | 98 | 506 | 31 | 434 | 5.51e-178 | 538 |
| Msa0873220 | MtrunA17_Chr3g0103771 | 60.688 | 407 | 115 | 3 | 609 | 972 | 436 | 840 | 2.01e-169 | 516 |
| Msa0873220 | MtrunA17_Chr2g0282731 | 47.733 | 419 | 199 | 5 | 94 | 505 | 183 | 588 | 3.09e-116 | 380 |
| Msa0873220 | MtrunA17_Chr2g0282731 | 47.277 | 404 | 161 | 6 | 613 | 972 | 593 | 988 | 1.98e-111 | 367 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0873220 | AT3G29320.1 | 71.071 | 999 | 183 | 8 | 24 | 972 | 20 | 962 | 0.0 | 1429 |
| Msa0873220 | AT3G46970.1 | 65.140 | 393 | 135 | 1 | 92 | 482 | 24 | 416 | 6.39e-178 | 538 |
| Msa0873220 | AT3G46970.1 | 60.934 | 407 | 114 | 3 | 609 | 972 | 437 | 841 | 6.53e-171 | 520 |
Find 270 sgRNAs with CRISPR-Local
Find 656 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCAAGAGTTTGTATATTT+GGG | 0.142006 | 6_1:-8834638 | Msa0873220:CDS |
| ATGAATATGCACGTGATATT+TGG | 0.142075 | 6_1:-8832692 | Msa0873220:CDS |
| GTTCCAAGAGTTTGTATATT+TGG | 0.163423 | 6_1:-8834639 | Msa0873220:CDS |
| CAGCCAGTTTCTCAGTATTT+AGG | 0.194304 | 6_1:+8836552 | None:intergenic |
| TTAAGAAGATCTCCTATTTC+AGG | 0.197355 | 6_1:+8834534 | None:intergenic |
| TCGATCTCAATTCTCAATTA+TGG | 0.211515 | 6_1:-8841612 | Msa0873220:exon |
| TTCTATGGCAAAGTTGTTTC+AGG | 0.221600 | 6_1:-8838595 | Msa0873220:CDS |
| ACATGTATGCAGGCTTATTT+TGG | 0.230044 | 6_1:+8832502 | None:intergenic |
| ACGCCTTGCGTCATGTTTCT+TGG | 0.230209 | 6_1:-8838881 | Msa0873220:CDS |
| TTGGCCATACGAACCAATTT+TGG | 0.236242 | 6_1:+8837060 | None:intergenic |
| CCTCGCCGGAACTCTATTTC+CGG | 0.246859 | 6_1:-8841533 | Msa0873220:CDS |
| ATAGTTGTCGTTTATATTCA+TGG | 0.262508 | 6_1:+8834736 | None:intergenic |
| GTCATGTTTCTTGGACTCTT+TGG | 0.277241 | 6_1:-8838872 | Msa0873220:CDS |
| GAGAATACTGATAGATATAA+AGG | 0.277348 | 6_1:-8837851 | Msa0873220:CDS |
| GAAGACAACTTCTTCCTCTT+TGG | 0.282721 | 6_1:-8833784 | Msa0873220:CDS |
| CCAGTGATCTGCTATTAAAA+AGG | 0.294350 | 6_1:+8832624 | None:intergenic |
| TCTTAGGTTAATTGTGCTTT+TGG | 0.294458 | 6_1:+8838492 | None:intergenic |
| GTAAATCATGATCCTGAAAT+AGG | 0.310791 | 6_1:-8834546 | Msa0873220:CDS |
| ACTTTGCCATAGAACCTTAC+AGG | 0.313260 | 6_1:+8838604 | None:intergenic |
| TCATATCCTGTAAGGTTCTA+TGG | 0.313824 | 6_1:-8838610 | Msa0873220:CDS |
| AACTTCCTCCTGCCCATCTT+TGG | 0.313899 | 6_1:+8838780 | None:intergenic |
| TGTTCCATATTCTGTGATTA+TGG | 0.316375 | 6_1:+8837452 | None:intergenic |
| AGTACCAGAACCACCAAAAT+TGG | 0.317069 | 6_1:-8837073 | Msa0873220:CDS |
| AACAGCAGATTCCGACTTAC+TGG | 0.319418 | 6_1:-8837433 | Msa0873220:CDS |
| CGGACCATAATCACAGAATA+TGG | 0.325150 | 6_1:-8837456 | Msa0873220:CDS |
| AATTATCCAGCATGGGGTTA+TGG | 0.327978 | 6_1:-8838841 | Msa0873220:CDS |
| ATTGGCAATTTAGAGTTAAC+TGG | 0.336913 | 6_1:-8839574 | Msa0873220:CDS |
| TTGGAAGGAAATGAAGGTTT+TGG | 0.336949 | 6_1:-8833374 | Msa0873220:CDS |
| TTCCAGGTCAAGTGTTTGTT+TGG | 0.358210 | 6_1:-8841425 | Msa0873220:CDS |
| CTCCTCTTTCTTATTCTCAA+TGG | 0.359991 | 6_1:+8837107 | None:intergenic |
| GTGATGCTCTTATAATAAAC+TGG | 0.361274 | 6_1:-8839774 | Msa0873220:CDS |
| CCAGATGCTGCACTTGGAAA+TGG | 0.362416 | 6_1:-8838913 | Msa0873220:CDS |
| TGAAATTTATCACAGATGTT+GGG | 0.364294 | 6_1:-8834575 | Msa0873220:CDS |
| TTACAGATTGGAACTTTAGA+TGG | 0.364779 | 6_1:-8833838 | Msa0873220:CDS |
| GAGGAGAAGAAGTTCTTTCC+AGG | 0.370307 | 6_1:-8841441 | Msa0873220:CDS |
| GATCAGGAGCAAGTGTGAAT+TGG | 0.372088 | 6_1:-8837945 | Msa0873220:CDS |
| TTTGTAAAATAAATAATTAA+GGG | 0.373134 | 6_1:-8832540 | Msa0873220:three_prime_UTR |
| TTTGGTCTTATATCCGGGTA+TGG | 0.377881 | 6_1:+8838510 | None:intergenic |
| GGTCCTAAATACTGAGAAAC+TGG | 0.386040 | 6_1:-8836555 | Msa0873220:CDS |
| GTGAATTGTCACAACATATC+AGG | 0.392297 | 6_1:-8834106 | Msa0873220:intron |
| AGGAGGAAGTTGCTGAAGAT+TGG | 0.395049 | 6_1:-8838768 | Msa0873220:CDS |
| AAAATAAATAATTAAGGGGT+TGG | 0.397154 | 6_1:-8832535 | Msa0873220:three_prime_UTR |
| GGTGGTTCTGGTACTGGCTC+AGG | 0.397223 | 6_1:+8837081 | None:intergenic |
| GATAAATTTCACAATTCTCT+TGG | 0.400297 | 6_1:+8834587 | None:intergenic |
| TTCCTGAGGCATTAGAGAAA+TGG | 0.401948 | 6_1:-8837625 | Msa0873220:CDS |
| ACTTCTTCGAATCGAGGATC+AGG | 0.403744 | 6_1:+8833458 | None:intergenic |
| GTGAAATTTATCACAGATGT+TGG | 0.404661 | 6_1:-8834576 | Msa0873220:CDS |
| ATCAGGAGCAAGTGTGAATT+GGG | 0.407365 | 6_1:-8837944 | Msa0873220:CDS |
| ATCAGTATTCTCATAAGCTC+TGG | 0.408852 | 6_1:+8837862 | None:intergenic |
| TTTATCAATTGTAGTACTGC+TGG | 0.410928 | 6_1:-8833910 | Msa0873220:intron |
| CAGATGCTGCACTTGGAAAT+GGG | 0.411685 | 6_1:-8838912 | Msa0873220:CDS |
| CTTCTTCCTCTTTGGTGCTA+AGG | 0.413991 | 6_1:-8833776 | Msa0873220:CDS |
| CCCTCTATTGAATCATCCCC+AGG | 0.414072 | 6_1:+8838045 | None:intergenic |
| TGATGACCTGATTGGATCCT+TGG | 0.416179 | 6_1:-8833393 | Msa0873220:CDS |
| AGTGAGGAGGTGAAAACTTC+GGG | 0.417375 | 6_1:-8837210 | Msa0873220:CDS |
| AGTGAGGAGGTGAAAACTTC+GGG | 0.417375 | 6_1:-8837312 | Msa0873220:CDS |
| AAAAGAAAGAGCGGAGGGAA+AGG | 0.418087 | 6_1:-8833731 | Msa0873220:intron |
| TTGGTCTTATATCCGGGTAT+GGG | 0.418926 | 6_1:+8838511 | None:intergenic |
| GCAGGCATATTACCTTTCAA+TGG | 0.419326 | 6_1:-8839713 | Msa0873220:CDS |
| AGAGCATTATTGAATGCAAT+TGG | 0.420123 | 6_1:-8839592 | Msa0873220:CDS |
| GCGGAGGGAAGAAGAAGATC+TGG | 0.421678 | 6_1:+8841499 | None:intergenic |
| TTGGGAAGAGTTTCCTGAAA+AGG | 0.422806 | 6_1:-8837926 | Msa0873220:CDS |
| AGAAATATCATCGGCCTCCT+TGG | 0.424584 | 6_1:+8837335 | None:intergenic |
| AACATGAAATTTGCAATGAA+TGG | 0.425259 | 6_1:-8833865 | Msa0873220:CDS |
| AAACAACAAATAACCAAAGA+TGG | 0.429018 | 6_1:-8838793 | Msa0873220:CDS |
| AGTGGATAGGCACAGAAGAT+TGG | 0.431227 | 6_1:-8836577 | Msa0873220:CDS |
| TTCATGTTTGACAGCTGGTC+CGG | 0.438286 | 6_1:-8837476 | Msa0873220:intron |
| CCATTTCCAAGTGCAGCATC+TGG | 0.443231 | 6_1:+8838913 | None:intergenic |
| TGATGATTCGGTTACGGCGG+TGG | 0.446340 | 6_1:+8841559 | None:intergenic |
| GGTAGACCCAATTGTTGAAA+AGG | 0.447805 | 6_1:-8837148 | Msa0873220:CDS |
| AGAATACTGATAGATATAAA+GGG | 0.452267 | 6_1:-8837850 | Msa0873220:CDS |
| TGTGGGAGCTCAAATTTCTC+TGG | 0.454455 | 6_1:+8839826 | None:intergenic |
| TTCCTTCCAAGGATCCAATC+AGG | 0.454968 | 6_1:+8833387 | None:intergenic |
| GGAAAGAACTTCTTCTCCTC+AGG | 0.456555 | 6_1:+8841444 | None:intergenic |
| GGCTCTAGCAAATGCTGAAA+AGG | 0.457338 | 6_1:-8838392 | Msa0873220:intron |
| GTGGATAGGCACAGAAGATT+GGG | 0.457825 | 6_1:-8836576 | Msa0873220:CDS |
| CTCATCTACGGCAATTTGAC+TGG | 0.458717 | 6_1:+8832660 | None:intergenic |
| ACCACCCACAACACAGAGAT+TGG | 0.460526 | 6_1:+8837041 | None:intergenic |
| ATATGCTATGTACTCTATCC+TGG | 0.460700 | 6_1:-8838063 | Msa0873220:CDS |
| TCTAACAGATGGGCAATCCC+TGG | 0.462078 | 6_1:-8838654 | Msa0873220:intron |
| TGCAGAATTTGCTGATGTAC+TGG | 0.464164 | 6_1:-8837364 | Msa0873220:CDS |
| ATGGGGCCAATGTTGAAATA+CGG | 0.465107 | 6_1:-8833819 | Msa0873220:CDS |
| GCAACACTAACATTGTAGTC+AGG | 0.466398 | 6_1:+8834149 | None:intergenic |
| AGTACGGTCACTGCTGAACT+TGG | 0.468267 | 6_1:+8832719 | None:intergenic |
| TATATTGTTGCTTGAGGCGA+AGG | 0.469919 | 6_1:+8838016 | None:intergenic |
| GGTAGACCCAATTGTTGAAA+AGG | 0.470343 | 6_1:-8837250 | Msa0873220:CDS |
| GCTCTGGGATGCACAAGGTT+GGG | 0.471869 | 6_1:+8837878 | None:intergenic |
| CTCCATTTCTCTAATGCCTC+AGG | 0.472048 | 6_1:+8837623 | None:intergenic |
| TCCTGGGGATGATTCAATAG+AGG | 0.474669 | 6_1:-8838046 | Msa0873220:CDS |
| GTCAAGTGTTTGTTTGGTAG+TGG | 0.475254 | 6_1:-8841419 | Msa0873220:CDS |
| GGATCCTTGGAAGGAAATGA+AGG | 0.475822 | 6_1:-8833380 | Msa0873220:CDS |
| GTTTAAGCTGGAAGGATGCT+TGG | 0.480742 | 6_1:-8837828 | Msa0873220:CDS |
| GACCCAATTGTTGAAAAGGA+TGG | 0.480834 | 6_1:-8837144 | Msa0873220:CDS |
| CAATTGTAGTACTGCTGGAA+TGG | 0.480854 | 6_1:-8833905 | Msa0873220:intron |
| AGATCTGGAAGTGATGAATC+CGG | 0.481140 | 6_1:+8841514 | None:intergenic |
| AACCTTGAATTATCCAGCAT+GGG | 0.483687 | 6_1:-8838848 | Msa0873220:CDS |
| TATGGACTGAGATACAAGTA+TGG | 0.485692 | 6_1:-8838823 | Msa0873220:CDS |
| GTGGAAGAAGTTTCTCCATC+AGG | 0.490757 | 6_1:+8837594 | None:intergenic |
| GCTAAGGCTCATGAAATCAC+TGG | 0.492305 | 6_1:-8833760 | Msa0873220:CDS |
| ATGGCCAATCTCTGTGTTGT+GGG | 0.492419 | 6_1:-8837045 | Msa0873220:CDS |
| AAAACCTTCATTTCCTTCCA+AGG | 0.492770 | 6_1:+8833376 | None:intergenic |
| GTTACGGCGGTGGTGTTCGT+TGG | 0.492830 | 6_1:+8841569 | None:intergenic |
| TGAAATAGGAGATCTTCTTA+AGG | 0.495583 | 6_1:-8834532 | Msa0873220:intron |
| TACAACTATGATGACCTGAT+TGG | 0.496499 | 6_1:-8833401 | Msa0873220:CDS |
| AAGAAGTTAAAGAATATGTC+AGG | 0.498244 | 6_1:-8833442 | Msa0873220:CDS |
| CTCTTCCCGTATTTCAACAT+TGG | 0.500355 | 6_1:+8833813 | None:intergenic |
| TTCAGCATTTGCTAGAGCCT+CGG | 0.500514 | 6_1:+8838396 | None:intergenic |
| ACCCCATGCTGGATAATTCA+AGG | 0.504131 | 6_1:+8838846 | None:intergenic |
| CCCTAGCTACTTAGAATGCC+AGG | 0.504611 | 6_1:-8833318 | Msa0873220:CDS |
| GCAGAGGCTTTGAGCCAGCT+TGG | 0.505087 | 6_1:-8839544 | Msa0873220:CDS |
| AGCTCTGGGATGCACAAGGT+TGG | 0.505105 | 6_1:+8837877 | None:intergenic |
| AAATTCCAAAACAAAACAAA+TGG | 0.505450 | 6_1:-8836659 | Msa0873220:CDS |
| TTTCTAATTTATAACCAAGC+TGG | 0.505466 | 6_1:+8839530 | None:intergenic |
| TTCCATTGAGAATAAGAAAG+AGG | 0.505503 | 6_1:-8837109 | Msa0873220:CDS |
| TACAGATTGGAACTTTAGAT+GGG | 0.506607 | 6_1:-8833837 | Msa0873220:CDS |
| TGTTGTGACAATTCACTAGC+TGG | 0.508135 | 6_1:+8834113 | None:intergenic |
| ATGACGTCTCATATCCTGTA+AGG | 0.508225 | 6_1:-8838618 | Msa0873220:CDS |
| AAGCTTCGTCGACCTCCTCC+TGG | 0.509253 | 6_1:+8833300 | None:intergenic |
| ACCACCAAAATTGGTTCGTA+TGG | 0.509789 | 6_1:-8837064 | Msa0873220:CDS |
| CATATTCTGTGATTATGGTC+CGG | 0.512221 | 6_1:+8837457 | None:intergenic |
| GCACAATTAACCTAAGACTC+TGG | 0.512436 | 6_1:-8838486 | Msa0873220:CDS |
| TGAATCCGGAAATAGAGTTC+CGG | 0.513118 | 6_1:+8841528 | None:intergenic |
| TCCTGGCATTCTAAGTAGCT+AGG | 0.516968 | 6_1:+8833317 | None:intergenic |
| GTCATTTCTAACGATTTCCC+AGG | 0.517919 | 6_1:+8838636 | None:intergenic |
| AGGAAATGATGATTCGGTTA+CGG | 0.518278 | 6_1:+8841553 | None:intergenic |
| TAGTGAGGAGGTGAAAACTT+CGG | 0.519012 | 6_1:-8837211 | Msa0873220:CDS |
| TAGTGAGGAGGTGAAAACTT+CGG | 0.519012 | 6_1:-8837313 | Msa0873220:CDS |
| TGAGAAGCTGAATGTTAAGC+AGG | 0.519503 | 6_1:-8839731 | Msa0873220:CDS |
| ACATGAAATTTGCAATGAAT+GGG | 0.520827 | 6_1:-8833864 | Msa0873220:CDS |
| TACATATATTACATGTATGC+AGG | 0.523366 | 6_1:+8832492 | None:intergenic |
| GTGGGTGGTCATGCAGTGAA+TGG | 0.523583 | 6_1:-8837027 | Msa0873220:CDS |
| ACAAATAACCAAAGATGGGC+AGG | 0.524620 | 6_1:-8838788 | Msa0873220:CDS |
| TAGGAGCCAGATGCTGCACT+TGG | 0.524834 | 6_1:-8838919 | Msa0873220:CDS |
| TATATAGAAGCTGTGAGGCT+TGG | 0.525742 | 6_1:+8832367 | None:intergenic |
| ATGTCAATATTGAACACAGC+AGG | 0.526649 | 6_1:-8832747 | Msa0873220:CDS |
| CTGGCTCAAAGCCTCTGCAT+AGG | 0.527133 | 6_1:+8839549 | None:intergenic |
| TAGATATAAAGGGTTTAAGC+TGG | 0.527277 | 6_1:-8837840 | Msa0873220:CDS |
| ACCCAATTGTTGAAAAGGAT+GGG | 0.528096 | 6_1:-8837143 | Msa0873220:CDS |
| CCGGCGAGGAAATGATGATT+CGG | 0.529270 | 6_1:+8841547 | None:intergenic |
| AAAGTTGTTTCAGGCTCAGA+TGG | 0.529663 | 6_1:-8838586 | Msa0873220:CDS |
| CTTACTGGGAAAGAAATTGA+AGG | 0.530359 | 6_1:-8837418 | Msa0873220:CDS |
| TGACACCAAGGAGATGGATC+AGG | 0.530701 | 6_1:-8836634 | Msa0873220:CDS |
| GAAATGGAGCATGGACCTGA+TGG | 0.531417 | 6_1:-8837609 | Msa0873220:CDS |
| CAACCTTGAATTATCCAGCA+TGG | 0.531867 | 6_1:-8838849 | Msa0873220:CDS |
| CTCAGTCCATAACCCCATGC+TGG | 0.531939 | 6_1:+8838835 | None:intergenic |
| CGTTGGTAACCGCATTGTCG+TGG | 0.533623 | 6_1:+8841586 | None:intergenic |
| TGGCTCAAAGCCTCTGCATA+GGG | 0.533924 | 6_1:+8839550 | None:intergenic |
| TCCTCAGGTTGAGATTGTGA+TGG | 0.535064 | 6_1:+8841459 | None:intergenic |
| GAAATTTATCACAGATGTTG+GGG | 0.535718 | 6_1:-8834574 | Msa0873220:CDS |
| CAATGTTGAAATACGGGAAG+AGG | 0.536002 | 6_1:-8833812 | Msa0873220:CDS |
| TGGGGCCAATGTTGAAATAC+GGG | 0.536331 | 6_1:-8833818 | Msa0873220:CDS |
| TGGTCTTATATCCGGGTATG+GGG | 0.541187 | 6_1:+8838512 | None:intergenic |
| TATAGAAATGATTGATGAGG+AGG | 0.544210 | 6_1:-8837558 | Msa0873220:intron |
| GATACAATGGAAGAAGCATC+TGG | 0.545482 | 6_1:+8839889 | None:intergenic |
| TTGTAAAATAAATAATTAAG+GGG | 0.548549 | 6_1:-8832539 | Msa0873220:three_prime_UTR |
| ATGAATGGGTGCTTACAGAT+TGG | 0.549665 | 6_1:-8833850 | Msa0873220:CDS |
| AGAGAAATTTGAGCTCCCAC+AGG | 0.550263 | 6_1:-8839824 | Msa0873220:CDS |
| TGGTTATAAATTAGAAAATG+TGG | 0.556505 | 6_1:-8839524 | Msa0873220:CDS |
| GGTGAAAACTTCGGGAGAAG+AGG | 0.557062 | 6_1:-8837202 | Msa0873220:CDS |
| GGTGAAAACTTCGGGAGAAG+AGG | 0.557062 | 6_1:-8837304 | Msa0873220:CDS |
| ATTAGAAAATGTGGCACACC+AGG | 0.557622 | 6_1:-8839515 | Msa0873220:intron |
| TACCAAACAAACACTTGACC+TGG | 0.557753 | 6_1:+8841423 | None:intergenic |
| ACAGCAGATTCCGACTTACT+GGG | 0.558035 | 6_1:-8837432 | Msa0873220:CDS |
| TATGCTATGTACTCTATCCT+GGG | 0.558133 | 6_1:-8838062 | Msa0873220:CDS |
| TCCAAGAGTTTGTATATTTG+GGG | 0.558310 | 6_1:-8834637 | Msa0873220:CDS |
| TTTCTTTCATCTTCTTGTAG+CGG | 0.560081 | 6_1:+8834691 | None:intergenic |
| TCTTTAACTTCTTCGAATCG+AGG | 0.560124 | 6_1:+8833452 | None:intergenic |
| TATGGCCAATCTCTGTGTTG+TGG | 0.560274 | 6_1:-8837046 | Msa0873220:CDS |
| AACAACAAATAACCAAAGAT+GGG | 0.561769 | 6_1:-8838792 | Msa0873220:CDS |
| ACTGGTGCCATGTCGTAAGA+AGG | 0.561937 | 6_1:-8832606 | Msa0873220:three_prime_UTR |
| CCTGGCATTCTAAGTAGCTA+GGG | 0.562423 | 6_1:+8833318 | None:intergenic |
| TCAGTATTCTCATAAGCTCT+GGG | 0.562658 | 6_1:+8837863 | None:intergenic |
| CTAAGGCTCATGAAATCACT+GGG | 0.562950 | 6_1:-8833759 | Msa0873220:CDS |
| CATGAGCCTTAGCACCAAAG+AGG | 0.563335 | 6_1:+8833770 | None:intergenic |
| AGTCAAATTGCCGTAGATGA+GGG | 0.563602 | 6_1:-8832658 | Msa0873220:exon |
| ATGGTGTGACACCAAGGAGA+TGG | 0.563817 | 6_1:-8836640 | Msa0873220:CDS |
| GCACATGATGTCCCCATACC+CGG | 0.563886 | 6_1:-8838523 | Msa0873220:CDS |
| TATGTGAATGATGGAGGTGG+TGG | 0.564518 | 6_1:+8841681 | None:intergenic |
| CAGTCAAATTGCCGTAGATG+AGG | 0.564898 | 6_1:-8832659 | Msa0873220:exon |
| CAGAACCTGATCCATCTCCT+TGG | 0.565877 | 6_1:+8836629 | None:intergenic |
| AAAATTATAACTCAGTGGAT+AGG | 0.568405 | 6_1:-8836590 | Msa0873220:CDS |
| CAATTTCTTTCCCAGTAAGT+CGG | 0.571319 | 6_1:+8837422 | None:intergenic |
| CAAGAGTTTGTATATTTGGG+GGG | 0.573466 | 6_1:-8834635 | Msa0873220:CDS |
| CTAACAGATGGGCAATCCCT+GGG | 0.573542 | 6_1:-8838653 | Msa0873220:intron |
| AGTACATCAGCAAATTCTGC+AGG | 0.573572 | 6_1:+8837366 | None:intergenic |
| CTACTTAGAATGCCAGGAGG+AGG | 0.574006 | 6_1:-8833312 | Msa0873220:CDS |
| TATAGATTACCCCTCATCTA+CGG | 0.575559 | 6_1:+8832648 | None:intergenic |
| CCTGGGGATGATTCAATAGA+GGG | 0.579615 | 6_1:-8838045 | Msa0873220:CDS |
| AAGAAATGAGTGCTGCAGAA+AGG | 0.580715 | 6_1:-8834674 | Msa0873220:CDS |
| AGATGCTGCACTTGGAAATG+GGG | 0.581607 | 6_1:-8838911 | Msa0873220:CDS |
| GTGCATATTCATGAATAGTA+CGG | 0.582366 | 6_1:+8832703 | None:intergenic |
| GTACTTAATACTTGATACAA+TGG | 0.582597 | 6_1:+8839876 | None:intergenic |
| GTTAAAGAATATGTCAGGAG+TGG | 0.583398 | 6_1:-8833437 | Msa0873220:CDS |
| TATAAAGGGTTTAAGCTGGA+AGG | 0.583990 | 6_1:-8837836 | Msa0873220:CDS |
| TGATGTACTGGTTAAATCCA+AGG | 0.586888 | 6_1:-8837352 | Msa0873220:CDS |
| CCGAATCATCATTTCCTCGC+CGG | 0.588917 | 6_1:-8841547 | Msa0873220:CDS |
| TTGTAGTACTGCTGGAATGG+AGG | 0.589716 | 6_1:-8833902 | Msa0873220:intron |
| CTTCTTCGAATCGAGGATCA+GGG | 0.591419 | 6_1:+8833459 | None:intergenic |
| GGCATTAGAGAAATGGAGCA+TGG | 0.592535 | 6_1:-8837618 | Msa0873220:CDS |
| ATAAAGTATATTGTTGCTTG+AGG | 0.592788 | 6_1:+8838010 | None:intergenic |
| TTATATAGTTCACGAGAGAG+TGG | 0.597165 | 6_1:+8841654 | None:intergenic |
| CGATGGTAATTATGATGAAG+TGG | 0.600671 | 6_1:-8837271 | Msa0873220:CDS |
| CCAAGAGTTTGTATATTTGG+GGG | 0.604097 | 6_1:-8834636 | Msa0873220:CDS |
| GATTATAGAAATGATTGATG+AGG | 0.605259 | 6_1:-8837561 | Msa0873220:CDS |
| TCTATAATCTCAACATGGCG+TGG | 0.607499 | 6_1:+8837575 | None:intergenic |
| CTCCTCACTAGAAATATCAT+CGG | 0.610235 | 6_1:+8837224 | None:intergenic |
| CTCCTCACTAGAAATATCAT+CGG | 0.610235 | 6_1:+8837326 | None:intergenic |
| CATAAGCTCTGGGATGCACA+AGG | 0.612123 | 6_1:+8837873 | None:intergenic |
| GATGCTGCACTTGGAAATGG+GGG | 0.612660 | 6_1:-8838910 | Msa0873220:CDS |
| GCCAATCTCTGTGTTGTGGG+TGG | 0.612868 | 6_1:-8837042 | Msa0873220:CDS |
| GTCAAATTGCCGTAGATGAG+GGG | 0.613759 | 6_1:-8832657 | Msa0873220:exon |
| TGACTACAATGTTAGTGTTG+CGG | 0.614529 | 6_1:-8834147 | Msa0873220:CDS |
| CAACACTAACATTGTAGTCA+GGG | 0.615301 | 6_1:+8834150 | None:intergenic |
| GAAGAGGAAGAAGACGGCGA+TGG | 0.616395 | 6_1:-8837186 | Msa0873220:CDS |
| GAAGAGGAAGAAGACGGCGA+TGG | 0.616395 | 6_1:-8837288 | Msa0873220:CDS |
| TCATTTCTAACGATTTCCCA+GGG | 0.618071 | 6_1:+8838637 | None:intergenic |
| TTCAGGATCATGATTTACAG+TGG | 0.618088 | 6_1:+8834551 | None:intergenic |
| GTTGAAATACGGGAAGAGGT+TGG | 0.618517 | 6_1:-8833808 | Msa0873220:CDS |
| GAAACTGGCTGAGCTGAGGA+AGG | 0.620928 | 6_1:-8836540 | Msa0873220:intron |
| AAAGCACACTGAAGCATCCG+AGG | 0.624915 | 6_1:-8838413 | Msa0873220:CDS |
| GATACATAGTGAAATTGTCA+AGG | 0.624923 | 6_1:-8836995 | Msa0873220:CDS |
| AGACCCAATTGTTGAAAAGG+AGG | 0.625655 | 6_1:-8837247 | Msa0873220:CDS |
| GAGAACGATACTTCAAGCGG+AGG | 0.625785 | 6_1:+8841483 | None:intergenic |
| ACAGAGGAGTGAACTCTGCA+TGG | 0.628641 | 6_1:+8839854 | None:intergenic |
| CGATGATATTTCTAGTGAGG+AGG | 0.629174 | 6_1:-8837223 | Msa0873220:CDS |
| CGATGATATTTCTAGTGAGG+AGG | 0.629174 | 6_1:-8837325 | Msa0873220:CDS |
| CTGAGAAACTGGCTGAGCTG+AGG | 0.631541 | 6_1:-8836544 | Msa0873220:CDS |
| AGTCCAAGAAACATGACGCA+AGG | 0.633236 | 6_1:+8838878 | None:intergenic |
| CTGAGAAAAGAAAGAGCGGA+GGG | 0.633877 | 6_1:-8833736 | Msa0873220:CDS |
| GTGAGTATCATTCATCTGCA+CGG | 0.635441 | 6_1:+8837900 | None:intergenic |
| GGCCGATGATATTTCTAGTG+AGG | 0.638306 | 6_1:-8837226 | Msa0873220:CDS |
| GGCCGATGATATTTCTAGTG+AGG | 0.638306 | 6_1:-8837328 | Msa0873220:CDS |
| AAACAAATGGTGTGACACCA+AGG | 0.638753 | 6_1:-8836646 | Msa0873220:CDS |
| TGGTCTGTTGCAATCACACA+AGG | 0.639860 | 6_1:+8832310 | None:intergenic |
| ACCTTGAATTATCCAGCATG+GGG | 0.640424 | 6_1:-8838847 | Msa0873220:CDS |
| GACCTGATTGGATCCTTGGA+AGG | 0.641908 | 6_1:-8833389 | Msa0873220:CDS |
| AGAACGATACTTCAAGCGGA+GGG | 0.642014 | 6_1:+8841484 | None:intergenic |
| ACTGCTGGAATGGAGGCAAG+TGG | 0.644726 | 6_1:-8833895 | Msa0873220:CDS |
| CGATGGTAATGATGATGAAG+TGG | 0.646341 | 6_1:-8837169 | Msa0873220:CDS |
| TCCATCACAATCTCAACCTG+AGG | 0.646351 | 6_1:-8841460 | Msa0873220:CDS |
| ACAGATTGGAACTTTAGATG+GGG | 0.650375 | 6_1:-8833836 | Msa0873220:CDS |
| GCATTGACCTTCTTACGACA+TGG | 0.653212 | 6_1:+8832599 | None:intergenic |
| TGAGTAAAATTATAACTCAG+TGG | 0.653235 | 6_1:-8836595 | Msa0873220:CDS |
| AATTTCTCTGGAGAAAACAG+AGG | 0.654082 | 6_1:+8839838 | None:intergenic |
| ACAGTAACAGTAGTAAACAA+AGG | 0.657893 | 6_1:+8832402 | None:intergenic |
| ATATTGTTGCTTGAGGCGAA+GGG | 0.658236 | 6_1:+8838017 | None:intergenic |
| TCGGGAGAAGAGGAAGAAGA+CGG | 0.659433 | 6_1:-8837192 | Msa0873220:CDS |
| TCGGGAGAAGAGGAAGAAGA+CGG | 0.659433 | 6_1:-8837294 | Msa0873220:CDS |
| AGTTGCTGAAGATTGGCTTG+AGG | 0.659770 | 6_1:-8838761 | Msa0873220:intron |
| GCCGTTGCAATAAAAGCCTG+TGG | 0.660507 | 6_1:+8839808 | None:intergenic |
| GCTGAGAAAAGAAAGAGCGG+AGG | 0.668266 | 6_1:-8833737 | Msa0873220:CDS |
| AATAACCAAAGATGGGCAGG+AGG | 0.671784 | 6_1:-8838785 | Msa0873220:CDS |
| CAACTATACATAGATACACA+TGG | 0.672796 | 6_1:+8832290 | None:intergenic |
| AAACCACACTGTTCTTCCTG+AGG | 0.672869 | 6_1:-8837639 | Msa0873220:CDS |
| GTTAACTGGTCCCTATGCAG+AGG | 0.675552 | 6_1:-8839560 | Msa0873220:CDS |
| GGAGAGAACGATACTTCAAG+CGG | 0.689765 | 6_1:+8841480 | None:intergenic |
| GACGAACTTCAACAACAACA+AGG | 0.693626 | 6_1:-8841368 | Msa0873220:intron |
| CCGTTGCAATAAAAGCCTGT+GGG | 0.696199 | 6_1:+8839809 | None:intergenic |
| ATGCTATGTACTCTATCCTG+GGG | 0.699481 | 6_1:-8838061 | Msa0873220:CDS |
| TGGGCTGAGAAAAGAAAGAG+CGG | 0.701718 | 6_1:-8833740 | Msa0873220:CDS |
| ATGCTTGGAATATTACCCAA+CGG | 0.709681 | 6_1:-8837813 | Msa0873220:intron |
| AAATGATGATTCGGTTACGG+CGG | 0.711337 | 6_1:+8841556 | None:intergenic |
| TCATTTCTATAATCTCAACA+TGG | 0.712018 | 6_1:+8837570 | None:intergenic |
| TTATGGCTTCCACGACAATG+CGG | 0.738618 | 6_1:-8841595 | Msa0873220:CDS |
| CCGGAAATAGAGTTCCGGCG+AGG | 0.738695 | 6_1:+8841533 | None:intergenic |
| CAATATATATAGAAGCTGTG+AGG | 0.745319 | 6_1:+8832362 | None:intergenic |
| TGGTGCATATGAGCTCAGAG+AGG | 0.754668 | 6_1:+8839909 | None:intergenic |
| ATGCCTCAGGAAGAACAGTG+TGG | 0.757200 | 6_1:+8837636 | None:intergenic |
| TGTACTGGTTAAATCCAAGG+AGG | 0.763383 | 6_1:-8837349 | Msa0873220:CDS |
| TAGCTACTTAGAATGCCAGG+AGG | 0.790540 | 6_1:-8833315 | Msa0873220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAAATAATAATAAT+TGG | - | chr6_1:8833676-8833695 | Msa0873220:intron | 0.0% |
| !!! | TTTTTTAAATAATAATAATT+GGG | - | chr6_1:8833677-8833696 | Msa0873220:intron | 0.0% |
| !!! | TTTTTTATTTTATTGCTTTT+TGG | - | chr6_1:8836291-8836310 | Msa0873220:intron | 10.0% |
| !!! | TTTTTATTTTATTGCTTTTT+GGG | - | chr6_1:8836292-8836311 | Msa0873220:intron | 10.0% |
| !! | AAAAATATATAATGTCATTA+TGG | + | chr6_1:8837155-8837174 | None:intergenic | 10.0% |
| !! | TATACTACTATATATTATAA+TGG | - | chr6_1:8837689-8837708 | Msa0873220:intron | 10.0% |
| !! | ATACTACTATATATTATAAT+GGG | - | chr6_1:8837690-8837709 | Msa0873220:intron | 10.0% |
| !!! | TTATGATTTTATTTGTTAAA+TGG | + | chr6_1:8837789-8837808 | None:intergenic | 10.0% |
| !! | TAATATATTCTTAATATTCA+AGG | - | chr6_1:8838025-8838044 | Msa0873220:CDS | 10.0% |
| !! | GTAATAAATTGTTAAATATT+AGG | + | chr6_1:8839021-8839040 | None:intergenic | 10.0% |
| !! | TTTAACAATTTATTACATTA+TGG | - | chr6_1:8839025-8839044 | Msa0873220:intron | 10.0% |
| !!! | TACTATACATTTTAAATAAT+TGG | + | chr6_1:8839253-8839272 | None:intergenic | 10.0% |
| !! | TTGTAAAATAAATAATTAAG+GGG | - | chr6_1:8841515-8841534 | Msa0873220:CDS | 10.0% |
| !! | TAAAAAAAGTCAAATGTATT+TGG | - | chr6_1:8833864-8833883 | Msa0873220:CDS | 15.0% |
| !!! | TTTTTGCTTATATTTTGTTA+CGG | - | chr6_1:8833926-8833945 | Msa0873220:intron | 15.0% |
| !! | GAATTGAAATAATGAATTAT+GGG | + | chr6_1:8834658-8834677 | None:intergenic | 15.0% |
| !! | TGAATTGAAATAATGAATTA+TGG | + | chr6_1:8834659-8834678 | None:intergenic | 15.0% |
| !! | TGAATTGAAATAATGAATTA+CGG | + | chr6_1:8834659-8834678 | None:intergenic | 15.0% |
| !!! | TTTTATTTTATTGCTTTTTG+GGG | - | chr6_1:8836293-8836312 | Msa0873220:intron | 15.0% |
| !!! | GAAATACTTTCAAATTTTTA+AGG | + | chr6_1:8837287-8837306 | None:intergenic | 15.0% |
| !! | AAATGAAATTGAAAAGATTT+AGG | - | chr6_1:8838098-8838117 | Msa0873220:intron | 15.0% |
| !! | AGTACATAATTTATTATAGT+AGG | - | chr6_1:8839133-8839152 | Msa0873220:intron | 15.0% |
| !!! | TACATTTTAAATAATTGGTT+GGG | + | chr6_1:8839248-8839267 | None:intergenic | 15.0% |
| !!! | ATACATTTTAAATAATTGGT+TGG | + | chr6_1:8839249-8839268 | None:intergenic | 15.0% |
| !! | TTAACATTAATATTATTCAG+AGG | - | chr6_1:8839726-8839745 | Msa0873220:CDS | 15.0% |
| !! | TAACATTAATATTATTCAGA+GGG | - | chr6_1:8839727-8839746 | Msa0873220:CDS | 15.0% |
| !! | TTATTTGTTCATATTTAATC+AGG | - | chr6_1:8839871-8839890 | Msa0873220:CDS | 15.0% |
| !!! | TTCAAAAATTGATAATTTGT+TGG | - | chr6_1:8840449-8840468 | Msa0873220:intron | 15.0% |
| !! | TGTTTATATTAACATAGAAT+TGG | + | chr6_1:8840995-8841014 | None:intergenic | 15.0% |
| !!! | CATTTTTTTCAAATTACTAC+AGG | + | chr6_1:8832920-8832939 | None:intergenic | 20.0% |
| !!! | ACATTTTAATAAGTGTTGTT+TGG | - | chr6_1:8833247-8833266 | Msa0873220:intron | 20.0% |
| !! | AATAATAATAATTGGGTAAG+AGG | - | chr6_1:8833684-8833703 | Msa0873220:intron | 20.0% |
| !!! | GATCTTTTAACTTTAAGAAA+TGG | + | chr6_1:8833759-8833778 | None:intergenic | 20.0% |
| !! | GTAACAAAATATAAGCAAAA+AGG | + | chr6_1:8833927-8833946 | None:intergenic | 20.0% |
| !! | TGGTTATAAATTAGAAAATG+TGG | - | chr6_1:8834530-8834549 | Msa0873220:intron | 20.0% |
| !! | TATGAAAAAAGATATACAGT+TGG | + | chr6_1:8834575-8834594 | None:intergenic | 20.0% |
| !!! | CATATTTTATTTCTAGAATG+TGG | - | chr6_1:8834591-8834610 | Msa0873220:CDS | 20.0% |
| !! | AAATAAGAGAGAAACAAAAT+TGG | + | chr6_1:8834832-8834851 | None:intergenic | 20.0% |
| !!! | TCTTATTTATTTCTAGAATG+TGG | - | chr6_1:8834844-8834863 | Msa0873220:intron | 20.0% |
| !! | GAATTGAAATAATGAATTAC+GGG | + | chr6_1:8834911-8834930 | None:intergenic | 20.0% |
| !!! | TAAACTCTTTTAGAAAATTG+TGG | - | chr6_1:8835705-8835724 | Msa0873220:intron | 20.0% |
| !! | AGAATACTGATAGATATAAA+GGG | - | chr6_1:8836204-8836223 | Msa0873220:intron | 20.0% |
| !!! | TTTATTTTATTGCTTTTTGG+GGG | - | chr6_1:8836294-8836313 | Msa0873220:intron | 20.0% |
| !!! | AGAGTTTATGCAAATATTTT+TGG | + | chr6_1:8836527-8836546 | None:intergenic | 20.0% |
| !!! | AAATATTTGTTTTTGACGAA+AGG | - | chr6_1:8837110-8837129 | Msa0873220:CDS | 20.0% |
| !!! | AATATTTGTTTTTGACGAAA+GGG | - | chr6_1:8837111-8837130 | Msa0873220:CDS | 20.0% |
| !! | AAATTCCAAAACAAAACAAA+TGG | - | chr6_1:8837395-8837414 | Msa0873220:CDS | 20.0% |
| !!! | GTTATAATTTTACTCAAATC+TGG | + | chr6_1:8837455-8837474 | None:intergenic | 20.0% |
| !! | AAGATCAACAAATTAAGTAA+CGG | + | chr6_1:8837546-8837565 | None:intergenic | 20.0% |
| !!! | CTTTATTTATAGAATTGAAG+AGG | - | chr6_1:8837581-8837600 | Msa0873220:CDS | 20.0% |
| !!! | TTTGCTTTTTTAAGAATATC+AGG | - | chr6_1:8837643-8837662 | Msa0873220:CDS | 20.0% |
| !! | TAGTAGTATAGTAGTATAAT+TGG | + | chr6_1:8837679-8837698 | None:intergenic | 20.0% |
| !!! | ATTTGTTAAATGGTTACTTT+GGG | + | chr6_1:8837779-8837798 | None:intergenic | 20.0% |
| !!! | TATTTGTTAAATGGTTACTT+TGG | + | chr6_1:8837780-8837799 | None:intergenic | 20.0% |
| !!! | ATGGTAATGTATTTTAAGAA+GGG | + | chr6_1:8837967-8837986 | None:intergenic | 20.0% |
| !! | AACATGCATAGTAAATAAAT+AGG | - | chr6_1:8839098-8839117 | Msa0873220:intron | 20.0% |
| !! | ACAAAATTCAAATAGTAACT+CGG | + | chr6_1:8839181-8839200 | None:intergenic | 20.0% |
| !! | AATATTATGAGTAGAGAAAA+AGG | + | chr6_1:8839216-8839235 | None:intergenic | 20.0% |
| !!! | CGACAACTATTAAATATTTT+TGG | - | chr6_1:8839331-8839350 | Msa0873220:intron | 20.0% |
| !! | AACATTAATATTATTCAGAG+GGG | - | chr6_1:8839728-8839747 | Msa0873220:CDS | 20.0% |
| !!! | TTATGCACTTTTTCTTATTA+TGG | - | chr6_1:8840797-8840816 | Msa0873220:intron | 20.0% |
| !! | ATAATAGAAAATGCAAATGA+GGG | + | chr6_1:8841035-8841054 | None:intergenic | 20.0% |
| !!! | ATTTGTAAAATGTTTTCACT+TGG | - | chr6_1:8841067-8841086 | Msa0873220:intron | 20.0% |
| !!! | TTTCTGTTTATTTTTCAGTA+CGG | + | chr6_1:8841493-8841512 | None:intergenic | 20.0% |
| !! | AAAATAAATAATTAAGGGGT+TGG | - | chr6_1:8841519-8841538 | Msa0873220:CDS | 20.0% |
| ! | AACATTTATCATGATAAGCT+CGG | + | chr6_1:8833088-8833107 | None:intergenic | 25.0% |
| ! | TAAAGTAAGTCAATCCAAAT+AGG | - | chr6_1:8833496-8833515 | Msa0873220:intron | 25.0% |
| ! | AAAACTCATGATAAAACCAA+AGG | + | chr6_1:8833974-8833993 | None:intergenic | 25.0% |
| ! | AATGATTAATGAGATTGCAA+TGG | + | chr6_1:8834095-8834114 | None:intergenic | 25.0% |
| ! | GTACTTAATACTTGATACAA+TGG | + | chr6_1:8834181-8834200 | None:intergenic | 25.0% |
| ! | TTTCTAATTTATAACCAAGC+TGG | + | chr6_1:8834527-8834546 | None:intergenic | 25.0% |
| !! | ATCAGTTTGTTTATTCAAAG+AGG | + | chr6_1:8834685-8834704 | None:intergenic | 25.0% |
| !! | ATCAGTTTGTTTATTCAAAG+AGG | + | chr6_1:8834685-8834704 | None:intergenic | 25.0% |
| ! | AAACAACAAATAACCAAAGA+TGG | - | chr6_1:8835261-8835280 | Msa0873220:intron | 25.0% |
| ! | AACAACAAATAACCAAAGAT+GGG | - | chr6_1:8835262-8835281 | Msa0873220:intron | 25.0% |
| !!! | GATTTGAATGCTTTTAATTC+TGG | - | chr6_1:8835618-8835637 | Msa0873220:intron | 25.0% |
| ! | GTTTAATAGAAGTAACCAAT+TGG | - | chr6_1:8835740-8835759 | Msa0873220:intron | 25.0% |
| ! | TATCATCAATCATATCCAAT+TGG | + | chr6_1:8835758-8835777 | None:intergenic | 25.0% |
| !!! | ACAAGTTGATAAAACTTGAA+AGG | - | chr6_1:8835934-8835953 | Msa0873220:intron | 25.0% |
| !! | ATAAAGTATATTGTTGCTTG+AGG | + | chr6_1:8836047-8836066 | None:intergenic | 25.0% |
| ! | GAGAATACTGATAGATATAA+AGG | - | chr6_1:8836203-8836222 | Msa0873220:intron | 25.0% |
| ! | AACAGAAACAAATGAATACT+AGG | + | chr6_1:8836269-8836288 | None:intergenic | 25.0% |
| !!! | TTATTTTATTGCTTTTTGGG+GGG | - | chr6_1:8836295-8836314 | Msa0873220:intron | 25.0% |
| ! | TCATTTCTATAATCTCAACA+TGG | + | chr6_1:8836487-8836506 | None:intergenic | 25.0% |
| ! | GATTATAGAAATGATTGATG+AGG | - | chr6_1:8836493-8836512 | Msa0873220:intron | 25.0% |
| !! | TTGCATAAACTCTTATTTGT+CGG | - | chr6_1:8836534-8836553 | Msa0873220:intron | 25.0% |
| ! | GTACAGTAATCACATAAAAA+TGG | + | chr6_1:8837187-8837206 | None:intergenic | 25.0% |
| ! | AGATATAAAGAAAGAAAAGG+AGG | + | chr6_1:8837309-8837328 | None:intergenic | 25.0% |
| ! | CACAGATATAAAGAAAGAAA+AGG | + | chr6_1:8837312-8837331 | None:intergenic | 25.0% |
| ! | TTATATCTGTGACAAGATAT+AGG | - | chr6_1:8837321-8837340 | Msa0873220:CDS | 25.0% |
| ! | TGAGTAAAATTATAACTCAG+TGG | - | chr6_1:8837459-8837478 | Msa0873220:CDS | 25.0% |
| ! | AAAATTATAACTCAGTGGAT+AGG | - | chr6_1:8837464-8837483 | Msa0873220:CDS | 25.0% |
| ! | GATAGAACAAAATGAAGAAA+AGG | + | chr6_1:8837619-8837638 | None:intergenic | 25.0% |
| !!! | GATGGTAATGTATTTTAAGA+AGG | + | chr6_1:8837968-8837987 | None:intergenic | 25.0% |
| !! | TGTATCTATATATTAGTCTC+AGG | - | chr6_1:8838157-8838176 | Msa0873220:intron | 25.0% |
| ! | ATTAATGAATGACACTAGTA+TGG | + | chr6_1:8838223-8838242 | None:intergenic | 25.0% |
| ! | AAAATAAAAATCACCATACC+TGG | + | chr6_1:8838373-8838392 | None:intergenic | 25.0% |
| ! | TGGGATACAAGTTATAAAAT+TGG | - | chr6_1:8838596-8838615 | Msa0873220:CDS | 25.0% |
| !! | TTCTATAGCTTAACTTTTAG+TGG | - | chr6_1:8838724-8838743 | Msa0873220:intron | 25.0% |
| !! | TCTATAGCTTAACTTTTAGT+GGG | - | chr6_1:8838725-8838744 | Msa0873220:intron | 25.0% |
| ! | GAGAGATATTTAACAGAATA+AGG | + | chr6_1:8838831-8838850 | None:intergenic | 25.0% |
| !! | TATTATTGGTTGATGTTTCA+GGG | - | chr6_1:8838867-8838886 | Msa0873220:CDS | 25.0% |
| !!! | GTATAGTATTGATAAAGTGT+TGG | - | chr6_1:8839265-8839284 | Msa0873220:intron | 25.0% |
| !!! | TGGCTTAATTGATTTTGTTT+AGG | - | chr6_1:8839285-8839304 | Msa0873220:intron | 25.0% |
| !! | ATAGTTGTCGTTTATATTCA+TGG | + | chr6_1:8839321-8839340 | None:intergenic | 25.0% |
| ! | TTCCAAGAGTTTGTATATTT+GGG | - | chr6_1:8839416-8839435 | Msa0873220:intron | 25.0% |
| ! | GATAAATTTCACAATTCTCT+TGG | + | chr6_1:8839470-8839489 | None:intergenic | 25.0% |
| ! | TGAAATTTATCACAGATGTT+GGG | - | chr6_1:8839479-8839498 | Msa0873220:intron | 25.0% |
| !! | TATGACTGTTATTTAAGAGT+TGG | - | chr6_1:8839549-8839568 | Msa0873220:CDS | 25.0% |
| ! | ATAATTCACATTGTCAAACT+GGG | + | chr6_1:8840067-8840086 | None:intergenic | 25.0% |
| ! | TATAATTCACATTGTCAAAC+TGG | + | chr6_1:8840068-8840087 | None:intergenic | 25.0% |
| !!! | TTTTATTTGAAGAATACTGC+TGG | - | chr6_1:8840095-8840114 | Msa0873220:intron | 25.0% |
| ! | AACATGAAATTTGCAATGAA+TGG | - | chr6_1:8840189-8840208 | Msa0873220:intron | 25.0% |
| ! | ACATGAAATTTGCAATGAAT+GGG | - | chr6_1:8840190-8840209 | Msa0873220:intron | 25.0% |
| ! | AGTAATTAAAATGCACAACA+TGG | + | chr6_1:8840362-8840381 | None:intergenic | 25.0% |
| ! | GGTAAATATTTATTCTATGC+TGG | + | chr6_1:8840421-8840440 | None:intergenic | 25.0% |
| !!! | ATCAATTTTTGAAACTGCAA+GGG | + | chr6_1:8840442-8840461 | None:intergenic | 25.0% |
| !!! | TATCAATTTTTGAAACTGCA+AGG | + | chr6_1:8840443-8840462 | None:intergenic | 25.0% |
| ! | AAGAAGTTAAAGAATATGTC+AGG | - | chr6_1:8840612-8840631 | Msa0873220:intron | 25.0% |
| ! | TATGTATACCATAAATGGTA+AGG | + | chr6_1:8840911-8840930 | None:intergenic | 25.0% |
| ! | AAACAAATATTCCCTAACAA+AGG | + | chr6_1:8840936-8840955 | None:intergenic | 25.0% |
| !!! | TAGGGAATATTTGTTTCTAA+TGG | - | chr6_1:8840940-8840959 | Msa0873220:intron | 25.0% |
| ! | CATAATAGAAAATGCAAATG+AGG | + | chr6_1:8841036-8841055 | None:intergenic | 25.0% |
| !! | TTTTCAAATGTTAATGACAG+TGG | + | chr6_1:8841259-8841278 | None:intergenic | 25.0% |
| !!! | TTCTGTTTATTTTTCAGTAC+GGG | + | chr6_1:8841492-8841511 | None:intergenic | 25.0% |
| ! | TACATATATTACATGTATGC+AGG | + | chr6_1:8841565-8841584 | None:intergenic | 25.0% |
| TCGATCTCAATTCTCAATTA+TGG | - | chr6_1:8832442-8832461 | Msa0873220:three_prime_UTR | 30.0% | |
| TGAAGCTAAACAAAAACTCA+AGG | - | chr6_1:8832658-8832677 | Msa0873220:exon | 30.0% | |
| GAATTGTTGATCTGAATTTG+CGG | - | chr6_1:8832772-8832791 | Msa0873220:intron | 30.0% | |
| ACACTTTAATAGTCGTTGTT+TGG | - | chr6_1:8832821-8832840 | Msa0873220:intron | 30.0% | |
| TGTTACAGAGTTTATCATGT+TGG | - | chr6_1:8833042-8833061 | Msa0873220:intron | 30.0% | |
| !!! | TTCTACTTTTAGGACCTATT+TGG | + | chr6_1:8833513-8833532 | None:intergenic | 30.0% |
| !! | AGCAAAGACTTTCTACTTTT+AGG | + | chr6_1:8833523-8833542 | None:intergenic | 30.0% |
| ! | TCTTTGCTCAATTACTGTTT+TGG | - | chr6_1:8833535-8833554 | Msa0873220:intron | 30.0% |
| AGCATTACAATAAAGCATGA+TGG | + | chr6_1:8833594-8833613 | None:intergenic | 30.0% | |
| !!! | AGTTGTTTTATTTGCAGCAA+TGG | - | chr6_1:8833640-8833659 | Msa0873220:intron | 30.0% |
| ! | CTTTAAGAAATGGAGTTCAT+GGG | + | chr6_1:8833749-8833768 | None:intergenic | 30.0% |
| ! | ACTTTAAGAAATGGAGTTCA+TGG | + | chr6_1:8833750-8833769 | None:intergenic | 30.0% |
| !!! | GCTTAAATTTTGCTATTGAG+AGG | + | chr6_1:8833836-8833855 | None:intergenic | 30.0% |
| GTCCAAAAGTCAAATGTATT+CGG | + | chr6_1:8833903-8833922 | None:intergenic | 30.0% | |
| AAAGGTTTCTTCCTCTATAA+AGG | + | chr6_1:8833956-8833975 | None:intergenic | 30.0% | |
| TTTATAGAGGAAGAAACCTT+TGG | - | chr6_1:8833955-8833974 | Msa0873220:intron | 30.0% | |
| CAAGATTAATCAGATTGCAA+AGG | + | chr6_1:8834031-8834050 | None:intergenic | 30.0% | |
| CAAGATTAATCAGATTGCAA+AGG | + | chr6_1:8834031-8834050 | None:intergenic | 30.0% | |
| GTGATGCTCTTATAATAAAC+TGG | - | chr6_1:8834280-8834299 | Msa0873220:intron | 30.0% | |
| CCAAGATGTTCAAATCATTA+AGG | + | chr6_1:8834389-8834408 | None:intergenic | 30.0% | |
| CCTTAATGATTTGAACATCT+TGG | - | chr6_1:8834386-8834405 | Msa0873220:intron | 30.0% | |
| ATCTATCATTCTATCTTGCA+GGG | - | chr6_1:8834438-8834457 | Msa0873220:intron | 30.0% | |
| ! | AGAGCATTATTGAATGCAAT+TGG | - | chr6_1:8834462-8834481 | Msa0873220:intron | 30.0% |
| ! | ATTGGCAATTTAGAGTTAAC+TGG | - | chr6_1:8834480-8834499 | Msa0873220:intron | 30.0% |
| AATAATGAATTATGGGCTTC+TGG | + | chr6_1:8834651-8834670 | None:intergenic | 30.0% | |
| ! | CTCTAAGAGAGAAACAAAAT+TGG | + | chr6_1:8835085-8835104 | None:intergenic | 30.0% |
| ! | AGAGTTGTGGTAATTCATTT+TGG | - | chr6_1:8835101-8835120 | Msa0873220:intron | 30.0% |
| TTGTGATCTATTCTAACAGA+TGG | - | chr6_1:8835389-8835408 | Msa0873220:intron | 30.0% | |
| TGTGATCTATTCTAACAGAT+GGG | - | chr6_1:8835390-8835409 | Msa0873220:intron | 30.0% | |
| CTCAGATGGTAAAAAACATT+GGG | - | chr6_1:8835482-8835501 | Msa0873220:intron | 30.0% | |
| ! | TCTTAGGTTAATTGTGCTTT+TGG | + | chr6_1:8835565-8835584 | None:intergenic | 30.0% |
| TAGATATAAAGGGTTTAAGC+TGG | - | chr6_1:8836214-8836233 | Msa0873220:intron | 30.0% | |
| !!! | TATTTTATTGCTTTTTGGGG+GGG | - | chr6_1:8836296-8836315 | Msa0873220:intron | 30.0% |
| TATAGAAATGATTGATGAGG+AGG | - | chr6_1:8836496-8836515 | Msa0873220:intron | 30.0% | |
| ! | TGCATAAACTCTTATTTGTC+GGG | - | chr6_1:8836535-8836554 | Msa0873220:intron | 30.0% |
| TGTTCCATATTCTGTGATTA+TGG | + | chr6_1:8836605-8836624 | None:intergenic | 30.0% | |
| TTCCATTGAGAATAAGAAAG+AGG | - | chr6_1:8836945-8836964 | Msa0873220:intron | 30.0% | |
| GATACATAGTGAAATTGTCA+AGG | - | chr6_1:8837059-8837078 | Msa0873220:CDS | 30.0% | |
| ! | CGTGTTCAATGCATTTTATA+AGG | - | chr6_1:8837086-8837105 | Msa0873220:CDS | 30.0% |
| CAGTAATCACATAAAAATGG+AGG | + | chr6_1:8837184-8837203 | None:intergenic | 30.0% | |
| AGTGAAACTTACCGAATATT+TGG | - | chr6_1:8837232-8837251 | Msa0873220:CDS | 30.0% | |
| GTGAAACTTACCGAATATTT+GGG | - | chr6_1:8837233-8837252 | Msa0873220:CDS | 30.0% | |
| TGAAACTTACCGAATATTTG+GGG | - | chr6_1:8837234-8837253 | Msa0873220:CDS | 30.0% | |
| ACACATATACCCCAAATATT+CGG | + | chr6_1:8837246-8837265 | None:intergenic | 30.0% | |
| !!! | GTTTTGTTTTGGAATTTCTC+AGG | + | chr6_1:8837392-8837411 | None:intergenic | 30.0% |
| !!! | TCACACCATTTGTTTTGTTT+TGG | + | chr6_1:8837403-8837422 | None:intergenic | 30.0% |
| AAGACCATGGAAATAAAACT+TGG | + | chr6_1:8838124-8838143 | None:intergenic | 30.0% | |
| TATAGATACAGTAACTGAAC+TGG | + | chr6_1:8838147-8838166 | None:intergenic | 30.0% | |
| TTAATAGTTCGCAGATAATG+AGG | - | chr6_1:8838238-8838257 | Msa0873220:intron | 30.0% | |
| AAAAAGGAATAACAAGGTGA+AGG | - | chr6_1:8838286-8838305 | Msa0873220:intron | 30.0% | |
| TATAGGCAAATGTTAGTTGT+TGG | - | chr6_1:8838401-8838420 | Msa0873220:CDS | 30.0% | |
| TTCTTCTGTTCTTACTTACA+TGG | + | chr6_1:8838673-8838692 | None:intergenic | 30.0% | |
| ATAATAGGTGGAAAATCTCT+AGG | + | chr6_1:8838853-8838872 | None:intergenic | 30.0% | |
| ! | AGAGATTTTCCACCTATTAT+TGG | - | chr6_1:8838853-8838872 | Msa0873220:CDS | 30.0% |
| AAACATCAACCAATAATAGG+TGG | + | chr6_1:8838865-8838884 | None:intergenic | 30.0% | |
| CTGAAACATCAACCAATAAT+AGG | + | chr6_1:8838868-8838887 | None:intergenic | 30.0% | |
| ! | CTATTATTGGTTGATGTTTC+AGG | - | chr6_1:8838866-8838885 | Msa0873220:CDS | 30.0% |
| AATAGAAAAGAAAACTAGGC+AGG | + | chr6_1:8838918-8838937 | None:intergenic | 30.0% | |
| ! | TTTTACTTACAACTGAAAGG+GGG | + | chr6_1:8838942-8838961 | None:intergenic | 30.0% |
| ! | CTTTTACTTACAACTGAAAG+GGG | + | chr6_1:8838943-8838962 | None:intergenic | 30.0% |
| ! | CCTTTTACTTACAACTGAAA+GGG | + | chr6_1:8838944-8838963 | None:intergenic | 30.0% |
| CCTTTCAGTTGTAAGTAAAA+GGG | - | chr6_1:8838942-8838961 | Msa0873220:intron | 30.0% | |
| TTTCTTTCATCTTCTTGTAG+CGG | + | chr6_1:8839366-8839385 | None:intergenic | 30.0% | |
| GTTCCAAGAGTTTGTATATT+TGG | - | chr6_1:8839415-8839434 | Msa0873220:intron | 30.0% | |
| TCCAAGAGTTTGTATATTTG+GGG | - | chr6_1:8839417-8839436 | Msa0873220:intron | 30.0% | |
| GTGAAATTTATCACAGATGT+TGG | - | chr6_1:8839478-8839497 | Msa0873220:intron | 30.0% | |
| GAAATTTATCACAGATGTTG+GGG | - | chr6_1:8839480-8839499 | Msa0873220:intron | 30.0% | |
| GTAAATCATGATCCTGAAAT+AGG | - | chr6_1:8839508-8839527 | Msa0873220:intron | 30.0% | |
| TTAAGAAGATCTCCTATTTC+AGG | + | chr6_1:8839523-8839542 | None:intergenic | 30.0% | |
| TGAAATAGGAGATCTTCTTA+AGG | - | chr6_1:8839522-8839541 | Msa0873220:CDS | 30.0% | |
| TGTAACTTCAACAATGACAT+GGG | + | chr6_1:8839604-8839623 | None:intergenic | 30.0% | |
| ATGTAACTTCAACAATGACA+TGG | + | chr6_1:8839605-8839624 | None:intergenic | 30.0% | |
| CTCAAAGTTTGTACTAGAAT+AGG | + | chr6_1:8839639-8839658 | None:intergenic | 30.0% | |
| TAATTCACATTGTCAAACTG+GGG | + | chr6_1:8840066-8840085 | None:intergenic | 30.0% | |
| AACAGGAAACTCAAATGATT+TGG | + | chr6_1:8840126-8840145 | None:intergenic | 30.0% | |
| CAGTACTACAATTGATAAAC+AGG | + | chr6_1:8840143-8840162 | None:intergenic | 30.0% | |
| TTTATCAATTGTAGTACTGC+TGG | - | chr6_1:8840144-8840163 | Msa0873220:intron | 30.0% | |
| TTACAGATTGGAACTTTAGA+TGG | - | chr6_1:8840216-8840235 | Msa0873220:intron | 30.0% | |
| TACAGATTGGAACTTTAGAT+GGG | - | chr6_1:8840217-8840236 | Msa0873220:intron | 30.0% | |
| TTATGATCTACGTTTCTATG+GGG | + | chr6_1:8840548-8840567 | None:intergenic | 30.0% | |
| GTTATGATCTACGTTTCTAT+GGG | + | chr6_1:8840549-8840568 | None:intergenic | 30.0% | |
| ! | TCAAGCAGATTATTTTCTTG+TGG | - | chr6_1:8840703-8840722 | Msa0873220:intron | 30.0% |
| ! | CAAGCAGATTATTTTCTTGT+GGG | - | chr6_1:8840704-8840723 | Msa0873220:intron | 30.0% |
| !! | AAGTGCATAAACTCACTTTT+TGG | + | chr6_1:8840787-8840806 | None:intergenic | 30.0% |
| ! | AGGAGTATGTATACCATAAA+TGG | + | chr6_1:8840916-8840935 | None:intergenic | 30.0% |
| GTATACATACTCCTTTGTTA+GGG | - | chr6_1:8840922-8840941 | Msa0873220:intron | 30.0% | |
| CAACTTTCATAACCATTAAC+AGG | - | chr6_1:8841198-8841217 | Msa0873220:intron | 30.0% | |
| TAACATTTGAAAATCGCATG+TGG | - | chr6_1:8841266-8841285 | Msa0873220:intron | 30.0% | |
| AACATTTGAAAATCGCATGT+GGG | - | chr6_1:8841267-8841286 | Msa0873220:intron | 30.0% | |
| GTGCATATTCATGAATAGTA+CGG | + | chr6_1:8841354-8841373 | None:intergenic | 30.0% | |
| ATGAATATGCACGTGATATT+TGG | - | chr6_1:8841362-8841381 | Msa0873220:intron | 30.0% | |
| CAGTGATCTGCTATTAAAAA+GGG | + | chr6_1:8841432-8841451 | None:intergenic | 30.0% | |
| !! | TATTTTTCAGTACGGGTAAT+TGG | + | chr6_1:8841485-8841504 | None:intergenic | 30.0% |
| ! | TACTCAATAGCATGTTTTCA+GGG | + | chr6_1:8841625-8841644 | None:intergenic | 30.0% |
| ! | TTACTCAATAGCATGTTTTC+AGG | + | chr6_1:8841626-8841645 | None:intergenic | 30.0% |
| ACAGTAACAGTAGTAAACAA+AGG | + | chr6_1:8841655-8841674 | None:intergenic | 30.0% | |
| CAATATATATAGAAGCTGTG+AGG | + | chr6_1:8841695-8841714 | None:intergenic | 30.0% | |
| !! | TTTTATGTGAATGATGGAGG+TGG | + | chr6_1:8832379-8832398 | None:intergenic | 35.0% |
| ! | AGTGGCTTTTATGTGAATGA+TGG | + | chr6_1:8832385-8832404 | None:intergenic | 35.0% |
| TTATATAGTTCACGAGAGAG+TGG | + | chr6_1:8832403-8832422 | None:intergenic | 35.0% | |
| !! | AGGAAATGATGATTCGGTTA+CGG | + | chr6_1:8832504-8832523 | None:intergenic | 35.0% |
| ACATAATCAGATGTCGATGT+TGG | - | chr6_1:8832950-8832969 | Msa0873220:intron | 35.0% | |
| ! | ACATCGACATTTATGATGGA+AGG | + | chr6_1:8832979-8832998 | None:intergenic | 35.0% |
| AGCAACATCGACATTTATGA+TGG | + | chr6_1:8832983-8833002 | None:intergenic | 35.0% | |
| TGTTGCTAAGCTTATCATGT+TGG | - | chr6_1:8832996-8833015 | Msa0873220:intron | 35.0% | |
| TAGAGCTTATGAAAACAAGC+TGG | - | chr6_1:8833401-8833420 | Msa0873220:CDS | 35.0% | |
| GAACTTACAAAAGCAGCTTA+TGG | + | chr6_1:8833438-8833457 | None:intergenic | 35.0% | |
| ATAAGCATTTACGAGACTCT+TGG | + | chr6_1:8833462-8833481 | None:intergenic | 35.0% | |
| ! | CAATAAAGCATGATGGTGAA+AGG | + | chr6_1:8833587-8833606 | None:intergenic | 35.0% |
| ACATGTCAGCTTAATGGTAA+AGG | + | chr6_1:8833785-8833804 | None:intergenic | 35.0% | |
| !! | GACCGAATACATTTGACTTT+TGG | - | chr6_1:8833898-8833917 | Msa0873220:CDS | 35.0% |
| CAAGATAACTGGTAGTAACA+TGG | + | chr6_1:8833999-8834018 | None:intergenic | 35.0% | |
| ! | AATTTCTCTGGAGAAAACAG+AGG | + | chr6_1:8834219-8834238 | None:intergenic | 35.0% |
| CCTGCAAAAATTCCATTGAA+AGG | + | chr6_1:8834356-8834375 | None:intergenic | 35.0% | |
| ! | CCTTTCAATGGAATTTTTGC+AGG | - | chr6_1:8834353-8834372 | Msa0873220:intron | 35.0% |
| ! | TCAATGGAATTTTTGCAGGT+TGG | - | chr6_1:8834357-8834376 | Msa0873220:intron | 35.0% |
| ! | CAATGGAATTTTTGCAGGTT+GGG | - | chr6_1:8834358-8834377 | Msa0873220:intron | 35.0% |
| CTGCAAGATAGAATGATAGA+TGG | + | chr6_1:8834439-8834458 | None:intergenic | 35.0% | |
| CATCTATCATTCTATCTTGC+AGG | - | chr6_1:8834437-8834456 | Msa0873220:intron | 35.0% | |
| TAAGAATCCAAGTACATCAG+TGG | + | chr6_1:8834759-8834778 | None:intergenic | 35.0% | |
| AATAATGAATTACGGGCTTC+TGG | + | chr6_1:8834904-8834923 | None:intergenic | 35.0% | |
| TAAGAATCCAAGTACATCAG+TGG | + | chr6_1:8834759-8834778 | None:intergenic | 35.0% | |
| ! | TTGTTTCTCTCTTAGAGTTG+TGG | - | chr6_1:8835088-8835107 | Msa0873220:intron | 35.0% |
| !!! | CATTTTGGCCTTGCAATAAT+AGG | - | chr6_1:8835116-8835135 | Msa0873220:intron | 35.0% |
| AACCTTGAATTATCCAGCAT+GGG | - | chr6_1:8835206-8835225 | Msa0873220:intron | 35.0% | |
| ! | TATGGACTGAGATACAAGTA+TGG | - | chr6_1:8835231-8835250 | Msa0873220:intron | 35.0% |
| TCATTTCTAACGATTTCCCA+GGG | + | chr6_1:8835420-8835439 | None:intergenic | 35.0% | |
| TCATATCCTGTAAGGTTCTA+TGG | - | chr6_1:8835444-8835463 | Msa0873220:intron | 35.0% | |
| ! | TTCTATGGCAAAGTTGTTTC+AGG | - | chr6_1:8835459-8835478 | Msa0873220:intron | 35.0% |
| GCTCAGATGGTAAAAAACAT+TGG | - | chr6_1:8835481-8835500 | Msa0873220:intron | 35.0% | |
| GATGGTAAAAAACATTGGGT+CGG | - | chr6_1:8835486-8835505 | Msa0873220:intron | 35.0% | |
| !!! | TGTGCTTTTGGTCTTATATC+CGG | + | chr6_1:8835553-8835572 | None:intergenic | 35.0% |
| TAGCAAATGCTGAAAAGGTT+TGG | - | chr6_1:8835667-8835686 | Msa0873220:intron | 35.0% | |
| ! | GTTTTGTATAGCAATGACTG+TGG | - | chr6_1:8835842-8835861 | Msa0873220:intron | 35.0% |
| TCAACTTGTACTCACATTGT+AGG | + | chr6_1:8835923-8835942 | None:intergenic | 35.0% | |
| ATAGCATATCTGCATTAGAG+GGG | + | chr6_1:8835980-8835999 | None:intergenic | 35.0% | |
| CATAGCATATCTGCATTAGA+GGG | + | chr6_1:8835981-8836000 | None:intergenic | 35.0% | |
| ACATAGCATATCTGCATTAG+AGG | + | chr6_1:8835982-8836001 | None:intergenic | 35.0% | |
| ATATGCTATGTACTCTATCC+TGG | - | chr6_1:8835991-8836010 | Msa0873220:intron | 35.0% | |
| TATGCTATGTACTCTATCCT+GGG | - | chr6_1:8835992-8836011 | Msa0873220:intron | 35.0% | |
| TCAGTATTCTCATAAGCTCT+GGG | + | chr6_1:8836194-8836213 | None:intergenic | 35.0% | |
| ATCAGTATTCTCATAAGCTC+TGG | + | chr6_1:8836195-8836214 | None:intergenic | 35.0% | |
| TATAAAGGGTTTAAGCTGGA+AGG | - | chr6_1:8836218-8836237 | Msa0873220:intron | 35.0% | |
| ATGCTTGGAATATTACCCAA+CGG | - | chr6_1:8836241-8836260 | Msa0873220:intron | 35.0% | |
| ! | AATGAATACTAGGTACCGTT+GGG | + | chr6_1:8836259-8836278 | None:intergenic | 35.0% |
| ! | AAATGAATACTAGGTACCGT+TGG | + | chr6_1:8836260-8836279 | None:intergenic | 35.0% |
| ! | GCATAAACTCTTATTTGTCG+GGG | - | chr6_1:8836536-8836555 | Msa0873220:intron | 35.0% |
| TGATATTCATGTTTGACAGC+TGG | - | chr6_1:8836573-8836592 | Msa0873220:CDS | 35.0% | |
| CATATTCTGTGATTATGGTC+CGG | + | chr6_1:8836600-8836619 | None:intergenic | 35.0% | |
| CAATTTCTTTCCCAGTAAGT+CGG | + | chr6_1:8836635-8836654 | None:intergenic | 35.0% | |
| CTTACTGGGAAAGAAATTGA+AGG | - | chr6_1:8836636-8836655 | Msa0873220:CDS | 35.0% | |
| !! | TGATGTACTGGTTAAATCCA+AGG | - | chr6_1:8836702-8836721 | Msa0873220:intron | 35.0% |
| CTCCTCACTAGAAATATCAT+CGG | + | chr6_1:8836731-8836750 | None:intergenic | 35.0% | |
| CGATGGTAATTATGATGAAG+TGG | - | chr6_1:8836783-8836802 | Msa0873220:intron | 35.0% | |
| CTCCTCACTAGAAATATCAT+CGG | + | chr6_1:8836731-8836750 | None:intergenic | 35.0% | |
| ACCCAATTGTTGAAAAGGAT+GGG | - | chr6_1:8836911-8836930 | Msa0873220:intron | 35.0% | |
| ! | TCCCATCCTTTTCAACAATT+GGG | + | chr6_1:8836915-8836934 | None:intergenic | 35.0% |
| ! | TTCCCATCCTTTTCAACAAT+TGG | + | chr6_1:8836916-8836935 | None:intergenic | 35.0% |
| CTCCTCTTTCTTATTCTCAA+TGG | + | chr6_1:8836950-8836969 | None:intergenic | 35.0% | |
| !! | TGTAGTGGGCATCATAAAAT+TGG | + | chr6_1:8837749-8837768 | None:intergenic | 35.0% |
| ! | CTTTGGGAAAAACTTGTAGT+GGG | + | chr6_1:8837763-8837782 | None:intergenic | 35.0% |
| ! | ACTTTGGGAAAAACTTGTAG+TGG | + | chr6_1:8837764-8837783 | None:intergenic | 35.0% |
| GCTTCTCACTAATCTAGAAA+AGG | - | chr6_1:8837811-8837830 | Msa0873220:intron | 35.0% | |
| !! | CCTGAAAAAGTGTTCACAAA+TGG | + | chr6_1:8837880-8837899 | None:intergenic | 35.0% |
| !!! | CCATTTGTGAACACTTTTTC+AGG | - | chr6_1:8837877-8837896 | Msa0873220:CDS | 35.0% |
| TATTAGTGATAGTCCCACAT+TGG | + | chr6_1:8837914-8837933 | None:intergenic | 35.0% | |
| !!! | TAGGCCAAGTTTTATTTCCA+TGG | - | chr6_1:8838117-8838136 | Msa0873220:intron | 35.0% |
| GATTTAGAGACTTGACAATC+AGG | + | chr6_1:8838192-8838211 | None:intergenic | 35.0% | |
| ATGAGGATCTACAAAAGCAA+TGG | - | chr6_1:8838255-8838274 | Msa0873220:intron | 35.0% | |
| GGAAGCAAAAAGGAATAACA+AGG | - | chr6_1:8838280-8838299 | Msa0873220:intron | 35.0% | |
| ! | GCATTGATCAAAGAAAGAAC+AGG | - | chr6_1:8838314-8838333 | Msa0873220:intron | 35.0% |
| ! | TTGTTGGTAAATTGTTAGCG+AGG | - | chr6_1:8838417-8838436 | Msa0873220:CDS | 35.0% |
| !! | AAACTGGCTCTAAAAGAAAC+AGG | + | chr6_1:8838572-8838591 | None:intergenic | 35.0% |
| !!! | GTTTCTTTTAGAGCCAGTTT+TGG | - | chr6_1:8838572-8838591 | Msa0873220:CDS | 35.0% |
| !!! | TTTTAGAGCCAGTTTTGGTT+GGG | - | chr6_1:8838577-8838596 | Msa0873220:CDS | 35.0% |
| TGAAGTTGAGAACCATTACT+AGG | - | chr6_1:8838622-8838641 | Msa0873220:CDS | 35.0% | |
| ! | AATTTTTCCCCACCTAGTAA+TGG | + | chr6_1:8838637-8838656 | None:intergenic | 35.0% |
| TTACTAGGTGGGGAAAAATT+AGG | - | chr6_1:8838637-8838656 | Msa0873220:CDS | 35.0% | |
| ! | GTTTGGTTACTTTGTGAGTA+TGG | - | chr6_1:8838765-8838784 | Msa0873220:CDS | 35.0% |
| ! | TTTGTGAGTATGGTGGAATT+AGG | - | chr6_1:8838775-8838794 | Msa0873220:CDS | 35.0% |
| ! | GGATATGTTTTACCTCAAGT+TGG | - | chr6_1:8838801-8838820 | Msa0873220:CDS | 35.0% |
| GGGCAATAGAAAAGAAAACT+AGG | + | chr6_1:8838922-8838941 | None:intergenic | 35.0% | |
| CCCTTTCAGTTGTAAGTAAA+AGG | - | chr6_1:8838941-8838960 | Msa0873220:intron | 35.0% | |
| ! | CCCTTTTACTTACAACTGAA+AGG | + | chr6_1:8838945-8838964 | None:intergenic | 35.0% |
| GAAAACATAAACCTGTTGTC+TGG | + | chr6_1:8838992-8839011 | None:intergenic | 35.0% | |
| CCAAGAGTTTGTATATTTGG+GGG | - | chr6_1:8839418-8839437 | Msa0873220:intron | 35.0% | |
| CAAGAGTTTGTATATTTGGG+GGG | - | chr6_1:8839419-8839438 | Msa0873220:intron | 35.0% | |
| TTCAGGATCATGATTTACAG+TGG | + | chr6_1:8839506-8839525 | None:intergenic | 35.0% | |
| TTTGAACTACCAGTATTGTC+TGG | + | chr6_1:8839817-8839836 | None:intergenic | 35.0% | |
| TTGCTATGAGTGATGCAAAA+TGG | - | chr6_1:8839840-8839859 | Msa0873220:CDS | 35.0% | |
| CAACACTAACATTGTAGTCA+GGG | + | chr6_1:8839907-8839926 | None:intergenic | 35.0% | |
| TGACTACAATGTTAGTGTTG+CGG | - | chr6_1:8839907-8839926 | Msa0873220:CDS | 35.0% | |
| GTGAATTGTCACAACATATC+AGG | - | chr6_1:8839948-8839967 | Msa0873220:intron | 35.0% | |
| CATATCAGGTAACCTTTAGT+TGG | - | chr6_1:8839962-8839981 | Msa0873220:intron | 35.0% | |
| GAGTAATGCAAACCAACTAA+AGG | + | chr6_1:8839977-8839996 | None:intergenic | 35.0% | |
| !! | AGTTGGTTTGCATTACTCTT+TGG | - | chr6_1:8839979-8839998 | Msa0873220:intron | 35.0% |
| GTTTGCATTACTCTTTGGAT+TGG | - | chr6_1:8839984-8840003 | Msa0873220:intron | 35.0% | |
| ACAGATTGGAACTTTAGATG+GGG | - | chr6_1:8840218-8840237 | Msa0873220:intron | 35.0% | |
| ! | AGACTGTTTGGAACTCTTAT+TGG | + | chr6_1:8840496-8840515 | None:intergenic | 35.0% |
| AAATCCAGATTTCCTCAACA+AGG | + | chr6_1:8840520-8840539 | None:intergenic | 35.0% | |
| CGTTATGATCTACGTTTCTA+TGG | + | chr6_1:8840550-8840569 | None:intergenic | 35.0% | |
| ! | TCTTTAACTTCTTCGAATCG+AGG | + | chr6_1:8840605-8840624 | None:intergenic | 35.0% |
| GTTAAAGAATATGTCAGGAG+TGG | - | chr6_1:8840617-8840636 | Msa0873220:intron | 35.0% | |
| TACAACTATGATGACCTGAT+TGG | - | chr6_1:8840653-8840672 | Msa0873220:intron | 35.0% | |
| AAAACCTTCATTTCCTTCCA+AGG | + | chr6_1:8840681-8840700 | None:intergenic | 35.0% | |
| ! | TTGGAAGGAAATGAAGGTTT+TGG | - | chr6_1:8840680-8840699 | Msa0873220:intron | 35.0% |
| ! | AGATTATTTTCTTGTGGGCA+AGG | - | chr6_1:8840709-8840728 | Msa0873220:intron | 35.0% |
| ! | GAAGGTGCAGTGAAAAAATT+GGG | + | chr6_1:8840842-8840861 | None:intergenic | 35.0% |
| ! | TGAAGGTGCAGTGAAAAAAT+TGG | + | chr6_1:8840843-8840862 | None:intergenic | 35.0% |
| TAAGGCCTAGTTGTTGTAAA+AGG | + | chr6_1:8840871-8840890 | None:intergenic | 35.0% | |
| ! | GTGAAGTACATAGTGGAATA+AGG | + | chr6_1:8840889-8840908 | None:intergenic | 35.0% |
| GTACTTCACCTTACCATTTA+TGG | - | chr6_1:8840900-8840919 | Msa0873220:intron | 35.0% | |
| GGTATACATACTCCTTTGTT+AGG | - | chr6_1:8840921-8840940 | Msa0873220:intron | 35.0% | |
| !! | TTGTTTCTAATGGTAGCCAT+AGG | - | chr6_1:8840950-8840969 | Msa0873220:intron | 35.0% |
| ATGCTTCCTTGAATAACCTA+TGG | + | chr6_1:8840969-8840988 | None:intergenic | 35.0% | |
| GCTAATACTACAGACTACTA+AGG | + | chr6_1:8841132-8841151 | None:intergenic | 35.0% | |
| !! | TTATGAAAGTTGATGCACAG+AGG | + | chr6_1:8841190-8841209 | None:intergenic | 35.0% |
| TCTACAAATGCACCTGTTAA+TGG | + | chr6_1:8841213-8841232 | None:intergenic | 35.0% | |
| AACAGGTGCATTTGTAGAAT+AGG | - | chr6_1:8841215-8841234 | Msa0873220:intron | 35.0% | |
| ATGTCAATATTGAACACAGC+AGG | - | chr6_1:8841307-8841326 | Msa0873220:intron | 35.0% | |
| TATAGATTACCCCTCATCTA+CGG | + | chr6_1:8841409-8841428 | None:intergenic | 35.0% | |
| CCAGTGATCTGCTATTAAAA+AGG | + | chr6_1:8841433-8841452 | None:intergenic | 35.0% | |
| ! | CCTTTTTAATAGCAGATCAC+TGG | - | chr6_1:8841430-8841449 | Msa0873220:CDS | 35.0% |
| ! | ACATGTATGCAGGCTTATTT+TGG | + | chr6_1:8841555-8841574 | None:intergenic | 35.0% |
| ! | GGCTTTTATGTGAATGATGG+AGG | + | chr6_1:8832382-8832401 | None:intergenic | 40.0% |
| !! | AAATGATGATTCGGTTACGG+CGG | + | chr6_1:8832501-8832520 | None:intergenic | 40.0% |
| TGAATCCGGAAATAGAGTTC+CGG | + | chr6_1:8832529-8832548 | None:intergenic | 40.0% | |
| AGATCTGGAAGTGATGAATC+CGG | + | chr6_1:8832543-8832562 | None:intergenic | 40.0% | |
| TTCCAGGTCAAGTGTTTGTT+TGG | - | chr6_1:8832629-8832648 | Msa0873220:three_prime_UTR | 40.0% | |
| TACCAAACAAACACTTGACC+TGG | + | chr6_1:8832634-8832653 | None:intergenic | 40.0% | |
| GTCAAGTGTTTGTTTGGTAG+TGG | - | chr6_1:8832635-8832654 | Msa0873220:three_prime_UTR | 40.0% | |
| GACGAACTTCAACAACAACA+AGG | - | chr6_1:8832686-8832705 | Msa0873220:CDS | 40.0% | |
| ! | ACACTTTCCATCAGAAGTGT+AGG | - | chr6_1:8833019-8833038 | Msa0873220:intron | 40.0% |
| TGTAACACCTACACTTCTGA+TGG | + | chr6_1:8833029-8833048 | None:intergenic | 40.0% | |
| ATAAGCTCGGACACTTCTTA+TGG | + | chr6_1:8833075-8833094 | None:intergenic | 40.0% | |
| ACCATTAAGCTGACATGTCA+TGG | - | chr6_1:8833787-8833806 | Msa0873220:CDS | 40.0% | |
| TCCATGACATGTCAGCTTAA+TGG | + | chr6_1:8833791-8833810 | None:intergenic | 40.0% | |
| ! | GTTACGGAGTACCTTTATAG+AGG | - | chr6_1:8833942-8833961 | Msa0873220:intron | 40.0% |
| !! | GATACAATGGAAGAAGCATC+TGG | + | chr6_1:8834168-8834187 | None:intergenic | 40.0% |
| TGAGAAGCTGAATGTTAAGC+AGG | - | chr6_1:8834323-8834342 | Msa0873220:intron | 40.0% | |
| GCAGGCATATTACCTTTCAA+TGG | - | chr6_1:8834341-8834360 | Msa0873220:intron | 40.0% | |
| ATTAGAAAATGTGGCACACC+AGG | - | chr6_1:8834539-8834558 | Msa0873220:CDS | 40.0% | |
| ! | ATCTGGCTCCTATTATTGCA+AGG | + | chr6_1:8835127-8835146 | None:intergenic | 40.0% |
| GTCATGTTTCTTGGACTCTT+TGG | - | chr6_1:8835182-8835201 | Msa0873220:intron | 40.0% | |
| CAACCTTGAATTATCCAGCA+TGG | - | chr6_1:8835205-8835224 | Msa0873220:intron | 40.0% | |
| ACCTTGAATTATCCAGCATG+GGG | - | chr6_1:8835207-8835226 | Msa0873220:intron | 40.0% | |
| AATTATCCAGCATGGGGTTA+TGG | - | chr6_1:8835213-8835232 | Msa0873220:intron | 40.0% | |
| ACAAATAACCAAAGATGGGC+AGG | - | chr6_1:8835266-8835285 | Msa0873220:intron | 40.0% | |
| GTCATTTCTAACGATTTCCC+AGG | + | chr6_1:8835421-8835440 | None:intergenic | 40.0% | |
| ATGACGTCTCATATCCTGTA+AGG | - | chr6_1:8835436-8835455 | Msa0873220:intron | 40.0% | |
| ACTTTGCCATAGAACCTTAC+AGG | + | chr6_1:8835453-8835472 | None:intergenic | 40.0% | |
| ! | AAAGTTGTTTCAGGCTCAGA+TGG | - | chr6_1:8835468-8835487 | Msa0873220:intron | 40.0% |
| !! | TTGGTCTTATATCCGGGTAT+GGG | + | chr6_1:8835546-8835565 | None:intergenic | 40.0% |
| !! | TTTGGTCTTATATCCGGGTA+TGG | + | chr6_1:8835547-8835566 | None:intergenic | 40.0% |
| !!! | GTGCTTTTGGTCTTATATCC+GGG | + | chr6_1:8835552-8835571 | None:intergenic | 40.0% |
| GCACAATTAACCTAAGACTC+TGG | - | chr6_1:8835568-8835587 | Msa0873220:intron | 40.0% | |
| ! | CTTTTGTAGACCAGAGTCTT+AGG | + | chr6_1:8835581-8835600 | None:intergenic | 40.0% |
| CTGAAAAGGTTTGGACGATA+TGG | - | chr6_1:8835676-8835695 | Msa0873220:intron | 40.0% | |
| ! | CTAAGTGACATCTGATGATG+TGG | - | chr6_1:8835872-8835891 | Msa0873220:intron | 40.0% |
| ATGCTATGTACTCTATCCTG+GGG | - | chr6_1:8835993-8836012 | Msa0873220:intron | 40.0% | |
| ! | ATATTGTTGCTTGAGGCGAA+GGG | + | chr6_1:8836040-8836059 | None:intergenic | 40.0% |
| ! | TATATTGTTGCTTGAGGCGA+AGG | + | chr6_1:8836041-8836060 | None:intergenic | 40.0% |
| ATCAGGAGCAAGTGTGAATT+GGG | - | chr6_1:8836110-8836129 | Msa0873220:intron | 40.0% | |
| TTGGGAAGAGTTTCCTGAAA+AGG | - | chr6_1:8836128-8836147 | Msa0873220:intron | 40.0% | |
| GTGAGTATCATTCATCTGCA+CGG | + | chr6_1:8836157-8836176 | None:intergenic | 40.0% | |
| ACATGAGATGACTGAACTAC+CGG | + | chr6_1:8836324-8836343 | None:intergenic | 40.0% | |
| !! | GCATGATCTGAGTTTGTTGA+TGG | - | chr6_1:8836348-8836367 | Msa0873220:intron | 40.0% |
| ! | TTCCTGAGGCATTAGAGAAA+TGG | - | chr6_1:8836429-8836448 | Msa0873220:intron | 40.0% |
| TCTATAATCTCAACATGGCG+TGG | + | chr6_1:8836482-8836501 | None:intergenic | 40.0% | |
| CGGACCATAATCACAGAATA+TGG | - | chr6_1:8836598-8836617 | Msa0873220:CDS | 40.0% | |
| AGTACATCAGCAAATTCTGC+AGG | + | chr6_1:8836691-8836710 | None:intergenic | 40.0% | |
| !! | TGCAGAATTTGCTGATGTAC+TGG | - | chr6_1:8836690-8836709 | Msa0873220:intron | 40.0% |
| !! | TGTACTGGTTAAATCCAAGG+AGG | - | chr6_1:8836705-8836724 | Msa0873220:intron | 40.0% |
| !! | CGATGATATTTCTAGTGAGG+AGG | - | chr6_1:8836729-8836748 | Msa0873220:intron | 40.0% |
| TAGTGAGGAGGTGAAAACTT+CGG | - | chr6_1:8836741-8836760 | Msa0873220:intron | 40.0% | |
| GGTAGACCCAATTGTTGAAA+AGG | - | chr6_1:8836804-8836823 | Msa0873220:intron | 40.0% | |
| AGACCCAATTGTTGAAAAGG+AGG | - | chr6_1:8836807-8836826 | Msa0873220:intron | 40.0% | |
| !! | CGATGATATTTCTAGTGAGG+AGG | - | chr6_1:8836729-8836748 | Msa0873220:intron | 40.0% |
| TAGTGAGGAGGTGAAAACTT+CGG | - | chr6_1:8836741-8836760 | Msa0873220:intron | 40.0% | |
| ! | CGATGGTAATGATGATGAAG+TGG | - | chr6_1:8836885-8836904 | Msa0873220:intron | 40.0% |
| GGTAGACCCAATTGTTGAAA+AGG | - | chr6_1:8836804-8836823 | Msa0873220:intron | 40.0% | |
| GACCCAATTGTTGAAAAGGA+TGG | - | chr6_1:8836808-8836827 | Msa0873220:intron | 40.0% | |
| !!! | AATTTTGGTGGTTCTGGTAC+TGG | + | chr6_1:8836982-8837001 | None:intergenic | 40.0% |
| AGTACCAGAACCACCAAAAT+TGG | - | chr6_1:8836981-8837000 | Msa0873220:CDS | 40.0% | |
| !! | ACCACCAAAATTGGTTCGTA+TGG | - | chr6_1:8836990-8837009 | Msa0873220:CDS | 40.0% |
| ! | TTGGCCATACGAACCAATTT+TGG | + | chr6_1:8836997-8837016 | None:intergenic | 40.0% |
| AAACAAATGGTGTGACACCA+AGG | - | chr6_1:8837408-8837427 | Msa0873220:CDS | 40.0% | |
| GGTCCTAAATACTGAGAAAC+TGG | - | chr6_1:8837499-8837518 | Msa0873220:intron | 40.0% | |
| CAGCCAGTTTCTCAGTATTT+AGG | + | chr6_1:8837505-8837524 | None:intergenic | 40.0% | |
| ! | AAGAAGGGTTAGTGAGTGTT+TGG | + | chr6_1:8837952-8837971 | None:intergenic | 40.0% |
| TTAAAAAATGGCCCACCCAA+TGG | + | chr6_1:8838008-8838027 | None:intergenic | 40.0% | |
| AGGATCTACAAAAGCAATGG+AGG | - | chr6_1:8838258-8838277 | Msa0873220:intron | 40.0% | |
| GGATCTACAAAAGCAATGGA+GGG | - | chr6_1:8838259-8838278 | Msa0873220:intron | 40.0% | |
| TGGTAAATTGTTAGCGAGGA+TGG | - | chr6_1:8838421-8838440 | Msa0873220:CDS | 40.0% | |
| GGTAAATTGTTAGCGAGGAT+GGG | - | chr6_1:8838422-8838441 | Msa0873220:CDS | 40.0% | |
| GTAAATTGTTAGCGAGGATG+GGG | - | chr6_1:8838423-8838442 | Msa0873220:CDS | 40.0% | |
| ACTAAAGTCATCACCATACC+TGG | + | chr6_1:8838540-8838559 | None:intergenic | 40.0% | |
| !!! | CTTTTAGAGCCAGTTTTGGT+TGG | - | chr6_1:8838576-8838595 | Msa0873220:CDS | 40.0% |
| ACTTGTATCCCAACCAAAAC+TGG | + | chr6_1:8838588-8838607 | None:intergenic | 40.0% | |
| AGTTGAGAACCATTACTAGG+TGG | - | chr6_1:8838625-8838644 | Msa0873220:CDS | 40.0% | |
| GTTGAGAACCATTACTAGGT+GGG | - | chr6_1:8838626-8838645 | Msa0873220:CDS | 40.0% | |
| TTGAGAACCATTACTAGGTG+GGG | - | chr6_1:8838627-8838646 | Msa0873220:CDS | 40.0% | |
| GTGGGGAAAAATTAGGTACA+TGG | - | chr6_1:8838644-8838663 | Msa0873220:CDS | 40.0% | |
| TGTCTTCGTAGACTAAGGTT+TGG | - | chr6_1:8838748-8838767 | Msa0873220:intron | 40.0% | |
| ! | TGGTTACTTTGTGAGTATGG+TGG | - | chr6_1:8838768-8838787 | Msa0873220:CDS | 40.0% |
| GCAGGAATAAAAGCTTGATG+GGG | + | chr6_1:8838900-8838919 | None:intergenic | 40.0% | |
| GGCAGGAATAAAAGCTTGAT+GGG | + | chr6_1:8838901-8838920 | None:intergenic | 40.0% | |
| AGGCAGGAATAAAAGCTTGA+TGG | + | chr6_1:8838902-8838921 | None:intergenic | 40.0% | |
| AAAAGGGCTACATTGCATGA+AGG | - | chr6_1:8838958-8838977 | Msa0873220:intron | 40.0% | |
| ! | AAACCTGTTGTCTGGTTCAA+AGG | + | chr6_1:8838984-8839003 | None:intergenic | 40.0% |
| ! | AAGAAATGAGTGCTGCAGAA+AGG | - | chr6_1:8839380-8839399 | Msa0873220:intron | 40.0% |
| CCCCCAAATATACAAACTCT+TGG | + | chr6_1:8839421-8839440 | None:intergenic | 40.0% | |
| AACAATGACATGGGTGACTA+AGG | + | chr6_1:8839595-8839614 | None:intergenic | 40.0% | |
| TTGAGCAAGTTGCTCTTATG+TGG | - | chr6_1:8839654-8839673 | Msa0873220:intron | 40.0% | |
| AACTACCAGTATTGTCTGGT+AGG | + | chr6_1:8839813-8839832 | None:intergenic | 40.0% | |
| GCAACACTAACATTGTAGTC+AGG | + | chr6_1:8839908-8839927 | None:intergenic | 40.0% | |
| TGTTGTGACAATTCACTAGC+TGG | + | chr6_1:8839944-8839963 | None:intergenic | 40.0% | |
| CAATTGTAGTACTGCTGGAA+TGG | - | chr6_1:8840149-8840168 | Msa0873220:intron | 40.0% | |
| ATGAATGGGTGCTTACAGAT+TGG | - | chr6_1:8840204-8840223 | Msa0873220:intron | 40.0% | |
| ATGGGGCCAATGTTGAAATA+CGG | - | chr6_1:8840235-8840254 | Msa0873220:intron | 40.0% | |
| CTCTTCCCGTATTTCAACAT+TGG | + | chr6_1:8840244-8840263 | None:intergenic | 40.0% | |
| CAATGTTGAAATACGGGAAG+AGG | - | chr6_1:8840242-8840261 | Msa0873220:intron | 40.0% | |
| GAAGACAACTTCTTCCTCTT+TGG | - | chr6_1:8840270-8840289 | Msa0873220:intron | 40.0% | |
| CTAAGGCTCATGAAATCACT+GGG | - | chr6_1:8840295-8840314 | Msa0873220:intron | 40.0% | |
| TCTTCCTTGTTGAGGAAATC+TGG | - | chr6_1:8840513-8840532 | Msa0873220:intron | 40.0% | |
| ! | TATGTCAGGAGTGGTGTTTT+TGG | - | chr6_1:8840626-8840645 | Msa0873220:intron | 40.0% |
| ! | ATGTCAGGAGTGGTGTTTTT+GGG | - | chr6_1:8840627-8840646 | Msa0873220:intron | 40.0% |
| TGTTGTAAAAGGTGAGGTGA+AGG | + | chr6_1:8840860-8840879 | None:intergenic | 40.0% | |
| CCTAGTTGTTGTAAAAGGTG+AGG | + | chr6_1:8840866-8840885 | None:intergenic | 40.0% | |
| ! | CCTCACCTTTTACAACAACT+AGG | - | chr6_1:8840863-8840882 | Msa0873220:intron | 40.0% |
| TGGTAAGGTGAAGTACATAG+TGG | + | chr6_1:8840896-8840915 | None:intergenic | 40.0% | |
| TGGTAGCCATAGGTTATTCA+AGG | - | chr6_1:8840960-8840979 | Msa0873220:intron | 40.0% | |
| AGTCAAATTGCCGTAGATGA+GGG | - | chr6_1:8841396-8841415 | Msa0873220:CDS | 40.0% | |
| !!! | TGTATGCAGGCTTATTTTGG+CGG | + | chr6_1:8841552-8841571 | None:intergenic | 40.0% |
| TATATAGAAGCTGTGAGGCT+TGG | + | chr6_1:8841690-8841709 | None:intergenic | 40.0% | |
| ! | TATGTGAATGATGGAGGTGG+TGG | + | chr6_1:8832376-8832395 | None:intergenic | 45.0% |
| TTATGGCTTCCACGACAATG+CGG | - | chr6_1:8832459-8832478 | Msa0873220:three_prime_UTR | 45.0% | |
| AGAACGATACTTCAAGCGGA+GGG | + | chr6_1:8832573-8832592 | None:intergenic | 45.0% | |
| GGAGAGAACGATACTTCAAG+CGG | + | chr6_1:8832577-8832596 | None:intergenic | 45.0% | |
| TCCATCACAATCTCAACCTG+AGG | - | chr6_1:8832594-8832613 | Msa0873220:three_prime_UTR | 45.0% | |
| !! | TCCTCAGGTTGAGATTGTGA+TGG | + | chr6_1:8832598-8832617 | None:intergenic | 45.0% |
| GGAAAGAACTTCTTCTCCTC+AGG | + | chr6_1:8832613-8832632 | None:intergenic | 45.0% | |
| GAGGAGAAGAAGTTCTTTCC+AGG | - | chr6_1:8832613-8832632 | Msa0873220:three_prime_UTR | 45.0% | |
| !! | TACTACAGGTGTTGACGTGT+CGG | + | chr6_1:8832906-8832925 | None:intergenic | 45.0% |
| ! | TAATCAGATTGCAAAGGCGC+TGG | + | chr6_1:8834025-8834044 | None:intergenic | 45.0% |
| ! | TAATCAGATTGCAAAGGCGC+TGG | + | chr6_1:8834025-8834044 | None:intergenic | 45.0% |
| TAATGAGATTGCAATGGCGC+TGG | + | chr6_1:8834089-8834108 | None:intergenic | 45.0% | |
| TGTGGGAGCTCAAATTTCTC+TGG | + | chr6_1:8834231-8834250 | None:intergenic | 45.0% | |
| AGAGAAATTTGAGCTCCCAC+AGG | - | chr6_1:8834230-8834249 | Msa0873220:intron | 45.0% | |
| CCGTTGCAATAAAAGCCTGT+GGG | + | chr6_1:8834248-8834267 | None:intergenic | 45.0% | |
| ! | CCCACAGGCTTTTATTGCAA+CGG | - | chr6_1:8834245-8834264 | Msa0873220:intron | 45.0% |
| ACAGTTGGAGATATCGTACC+TGG | + | chr6_1:8834560-8834579 | None:intergenic | 45.0% | |
| TGAGAGTCCACTGATGTACT+TGG | - | chr6_1:8834749-8834768 | Msa0873220:CDS | 45.0% | |
| TGAGAGTCCACTGATGTACT+TGG | - | chr6_1:8834749-8834768 | Msa0873220:CDS | 45.0% | |
| CAGATGCTGCACTTGGAAAT+GGG | - | chr6_1:8835142-8835161 | Msa0873220:intron | 45.0% | |
| AGATGCTGCACTTGGAAATG+GGG | - | chr6_1:8835143-8835162 | Msa0873220:intron | 45.0% | |
| AGTCCAAGAAACATGACGCA+AGG | + | chr6_1:8835179-8835198 | None:intergenic | 45.0% | |
| ACCCCATGCTGGATAATTCA+AGG | + | chr6_1:8835211-8835230 | None:intergenic | 45.0% | |
| AATAACCAAAGATGGGCAGG+AGG | - | chr6_1:8835269-8835288 | Msa0873220:intron | 45.0% | |
| AGGAGGAAGTTGCTGAAGAT+TGG | - | chr6_1:8835286-8835305 | Msa0873220:intron | 45.0% | |
| !! | AGTTGCTGAAGATTGGCTTG+AGG | - | chr6_1:8835293-8835312 | Msa0873220:intron | 45.0% |
| GGTAAAAAACATTGGGTCGG+AGG | - | chr6_1:8835489-8835508 | Msa0873220:intron | 45.0% | |
| !! | TGGTCTTATATCCGGGTATG+GGG | + | chr6_1:8835545-8835564 | None:intergenic | 45.0% |
| ! | TTCAGCATTTGCTAGAGCCT+CGG | + | chr6_1:8835661-8835680 | None:intergenic | 45.0% |
| ! | GGCTCTAGCAAATGCTGAAA+AGG | - | chr6_1:8835662-8835681 | Msa0873220:intron | 45.0% |
| ! | AGTGACATCTGATGATGTGG+AGG | - | chr6_1:8835875-8835894 | Msa0873220:intron | 45.0% |
| TCCTGGGGATGATTCAATAG+AGG | - | chr6_1:8836008-8836027 | Msa0873220:intron | 45.0% | |
| CCTGGGGATGATTCAATAGA+GGG | - | chr6_1:8836009-8836028 | Msa0873220:intron | 45.0% | |
| !!! | GCTCGTTTTGAGAGAAGATC+AGG | - | chr6_1:8836093-8836112 | Msa0873220:intron | 45.0% |
| GATCAGGAGCAAGTGTGAAT+TGG | - | chr6_1:8836109-8836128 | Msa0873220:intron | 45.0% | |
| GTTTAAGCTGGAAGGATGCT+TGG | - | chr6_1:8836226-8836245 | Msa0873220:intron | 45.0% | |
| ACTATCTGCCACTGTGATCT+AGG | - | chr6_1:8836378-8836397 | Msa0873220:intron | 45.0% | |
| AAACCACACTGTTCTTCCTG+AGG | - | chr6_1:8836415-8836434 | Msa0873220:intron | 45.0% | |
| CTCCATTTCTCTAATGCCTC+AGG | + | chr6_1:8836434-8836453 | None:intergenic | 45.0% | |
| GGCATTAGAGAAATGGAGCA+TGG | - | chr6_1:8836436-8836455 | Msa0873220:intron | 45.0% | |
| GTGGAAGAAGTTTCTCCATC+AGG | + | chr6_1:8836463-8836482 | None:intergenic | 45.0% | |
| TTCATGTTTGACAGCTGGTC+CGG | - | chr6_1:8836578-8836597 | Msa0873220:CDS | 45.0% | |
| AACAGCAGATTCCGACTTAC+TGG | - | chr6_1:8836621-8836640 | Msa0873220:CDS | 45.0% | |
| ACAGCAGATTCCGACTTACT+GGG | - | chr6_1:8836622-8836641 | Msa0873220:CDS | 45.0% | |
| AGAAATATCATCGGCCTCCT+TGG | + | chr6_1:8836722-8836741 | None:intergenic | 45.0% | |
| !! | GGCCGATGATATTTCTAGTG+AGG | - | chr6_1:8836726-8836745 | Msa0873220:intron | 45.0% |
| AGTGAGGAGGTGAAAACTTC+GGG | - | chr6_1:8836742-8836761 | Msa0873220:intron | 45.0% | |
| ! | CGGCCTCCTTTTCAACAATT+GGG | + | chr6_1:8836813-8836832 | None:intergenic | 45.0% |
| ! | TCGGCCTCCTTTTCAACAAT+TGG | + | chr6_1:8836814-8836833 | None:intergenic | 45.0% |
| !! | GGCCGATGATATTTCTAGTG+AGG | - | chr6_1:8836726-8836745 | Msa0873220:intron | 45.0% |
| AGTGAGGAGGTGAAAACTTC+GGG | - | chr6_1:8836742-8836761 | Msa0873220:intron | 45.0% | |
| !! | CGAACCAATTTTGGTGGTTC+TGG | + | chr6_1:8836988-8837007 | None:intergenic | 45.0% |
| ! | GCCATACGAACCAATTTTGG+TGG | + | chr6_1:8836994-8837013 | None:intergenic | 45.0% |
| TATGGCCAATCTCTGTGTTG+TGG | - | chr6_1:8837008-8837027 | Msa0873220:CDS | 45.0% | |
| ATGGCCAATCTCTGTGTTGT+GGG | - | chr6_1:8837009-8837028 | Msa0873220:CDS | 45.0% | |
| TGCCATACTTCATGCAGTTG+TGG | - | chr6_1:8837366-8837385 | Msa0873220:CDS | 45.0% | |
| AGTGGATAGGCACAGAAGAT+TGG | - | chr6_1:8837477-8837496 | Msa0873220:intron | 45.0% | |
| GTGGATAGGCACAGAAGATT+GGG | - | chr6_1:8837478-8837497 | Msa0873220:intron | 45.0% | |
| CTTGCACTTACGAGCTTGTA+AGG | - | chr6_1:8837841-8837860 | Msa0873220:CDS | 45.0% | |
| AGGCCATATCTCATCCAATG+TGG | - | chr6_1:8837897-8837916 | Msa0873220:CDS | 45.0% | |
| GGCCATATCTCATCCAATGT+GGG | - | chr6_1:8837898-8837917 | Msa0873220:CDS | 45.0% | |
| GTCCCACATTGGATGAGATA+TGG | + | chr6_1:8837903-8837922 | None:intergenic | 45.0% | |
| TTAGTGAGTGTTTGGTCTCG+AGG | + | chr6_1:8837944-8837963 | None:intergenic | 45.0% | |
| GTAACTGAACTGGAAGACCA+TGG | + | chr6_1:8838137-8838156 | None:intergenic | 45.0% | |
| TGACACTAGTATGGTCAGCT+TGG | + | chr6_1:8838214-8838233 | None:intergenic | 45.0% | |
| AGCAATGGAGGGAAGCAAAA+AGG | - | chr6_1:8838270-8838289 | Msa0873220:intron | 45.0% | |
| TGGATGTCGAACATTGCATC+AGG | + | chr6_1:8838353-8838372 | None:intergenic | 45.0% | |
| TGATGCAATGTTCGACATCC+AGG | - | chr6_1:8838352-8838371 | Msa0873220:intron | 45.0% | |
| CAATGTTCGACATCCAGGTA+TGG | - | chr6_1:8838357-8838376 | Msa0873220:intron | 45.0% | |
| ! | TGGGGAAATGTTAGTTTCCC+AGG | - | chr6_1:8838441-8838460 | Msa0873220:CDS | 45.0% |
| ! | GGGGAAATGTTAGTTTCCCA+GGG | - | chr6_1:8838442-8838461 | Msa0873220:CDS | 45.0% |
| AGGAGATTTAAGGAGGTCCA+GGG | + | chr6_1:8838473-8838492 | None:intergenic | 45.0% | |
| ACGTTGGAGGAGATTTAAGG+AGG | + | chr6_1:8838480-8838499 | None:intergenic | 45.0% | |
| ! | GAGTATGGTGGAATTAGGCT+AGG | - | chr6_1:8838780-8838799 | Msa0873220:CDS | 45.0% |
| GAATAAGGCTGTCCAACTTG+AGG | + | chr6_1:8838816-8838835 | None:intergenic | 45.0% | |
| CTCGGAGTACAAGTGAAAAC+TGG | + | chr6_1:8839163-8839182 | None:intergenic | 45.0% | |
| TTGCTCCTACCAGACAATAC+TGG | - | chr6_1:8839805-8839824 | Msa0873220:CDS | 45.0% | |
| TTGTAGTACTGCTGGAATGG+AGG | - | chr6_1:8840152-8840171 | Msa0873220:intron | 45.0% | |
| TGGGGCCAATGTTGAAATAC+GGG | - | chr6_1:8840236-8840255 | Msa0873220:intron | 45.0% | |
| GTTGAAATACGGGAAGAGGT+TGG | - | chr6_1:8840246-8840265 | Msa0873220:intron | 45.0% | |
| !! | CTTCTTCCTCTTTGGTGCTA+AGG | - | chr6_1:8840278-8840297 | Msa0873220:intron | 45.0% |
| GCTAAGGCTCATGAAATCAC+TGG | - | chr6_1:8840294-8840313 | Msa0873220:intron | 45.0% | |
| TGGGCTGAGAAAAGAAAGAG+CGG | - | chr6_1:8840314-8840333 | Msa0873220:intron | 45.0% | |
| CTGAGAAAAGAAAGAGCGGA+GGG | - | chr6_1:8840318-8840337 | Msa0873220:intron | 45.0% | |
| AAAAGAAAGAGCGGAGGGAA+AGG | - | chr6_1:8840323-8840342 | Msa0873220:intron | 45.0% | |
| TATGCTGGTGTGCTAACACA+TGG | + | chr6_1:8840406-8840425 | None:intergenic | 45.0% | |
| CCTCAACAAGGAAGACTGTT+TGG | + | chr6_1:8840508-8840527 | None:intergenic | 45.0% | |
| CCAAACAGTCTTCCTTGTTG+AGG | - | chr6_1:8840505-8840524 | Msa0873220:intron | 45.0% | |
| CTTCTTCGAATCGAGGATCA+GGG | + | chr6_1:8840598-8840617 | None:intergenic | 45.0% | |
| ACTTCTTCGAATCGAGGATC+AGG | + | chr6_1:8840599-8840618 | None:intergenic | 45.0% | |
| TGATGACCTGATTGGATCCT+TGG | - | chr6_1:8840661-8840680 | Msa0873220:intron | 45.0% | |
| TTCCTTCCAAGGATCCAATC+AGG | + | chr6_1:8840670-8840689 | None:intergenic | 45.0% | |
| GGATCCTTGGAAGGAAATGA+AGG | - | chr6_1:8840674-8840693 | Msa0873220:intron | 45.0% | |
| CCTGGCATTCTAAGTAGCTA+GGG | + | chr6_1:8840739-8840758 | None:intergenic | 45.0% | |
| TCCTGGCATTCTAAGTAGCT+AGG | + | chr6_1:8840740-8840759 | None:intergenic | 45.0% | |
| TAGCTACTTAGAATGCCAGG+AGG | - | chr6_1:8840739-8840758 | Msa0873220:intron | 45.0% | |
| CTAAGGCATATCTCTGCATG+AGG | + | chr6_1:8841115-8841134 | None:intergenic | 45.0% | |
| CTCATCTACGGCAATTTGAC+TGG | + | chr6_1:8841397-8841416 | None:intergenic | 45.0% | |
| CAGTCAAATTGCCGTAGATG+AGG | - | chr6_1:8841395-8841414 | Msa0873220:CDS | 45.0% | |
| GTCAAATTGCCGTAGATGAG+GGG | - | chr6_1:8841397-8841416 | Msa0873220:CDS | 45.0% | |
| ! | GCATTGACCTTCTTACGACA+TGG | + | chr6_1:8841458-8841477 | None:intergenic | 45.0% |
| !! | GCATGTTTTCAGGGCAATAC+TGG | + | chr6_1:8841616-8841635 | None:intergenic | 45.0% |
| TGGTCTGTTGCAATCACACA+AGG | + | chr6_1:8841747-8841766 | None:intergenic | 45.0% | |
| !!! | AAAATAAATTTAAATTGTTT+TGG | - | chr6_1:8833344-8833363 | Msa0873220:CDS | 5.0% |
| !! | ATTAAGAATATATTAAAAAA+TGG | + | chr6_1:8838020-8838039 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTGTTTTTTTAT+AGG | - | chr6_1:8838384-8838403 | Msa0873220:intron | 5.0% |
| !!! | TTTTGTAAAATAAATAATTA+AGG | - | chr6_1:8841513-8841532 | Msa0873220:CDS | 5.0% |
| !! | TTTGTAAAATAAATAATTAA+GGG | - | chr6_1:8841514-8841533 | Msa0873220:CDS | 5.0% |
| CCGGCGAGGAAATGATGATT+CGG | + | chr6_1:8832510-8832529 | None:intergenic | 50.0% | |
| CCGAATCATCATTTCCTCGC+CGG | - | chr6_1:8832507-8832526 | Msa0873220:three_prime_UTR | 50.0% | |
| GAGAACGATACTTCAAGCGG+AGG | + | chr6_1:8832574-8832593 | None:intergenic | 50.0% | |
| GCTCGGACACTTCTTATGGA+AGG | + | chr6_1:8833071-8833090 | None:intergenic | 50.0% | |
| TGGTGCATATGAGCTCAGAG+AGG | + | chr6_1:8834148-8834167 | None:intergenic | 50.0% | |
| ACAGAGGAGTGAACTCTGCA+TGG | + | chr6_1:8834203-8834222 | None:intergenic | 50.0% | |
| GCCGTTGCAATAAAAGCCTG+TGG | + | chr6_1:8834249-8834268 | None:intergenic | 50.0% | |
| GTTAACTGGTCCCTATGCAG+AGG | - | chr6_1:8834494-8834513 | Msa0873220:intron | 50.0% | |
| TGGCTCAAAGCCTCTGCATA+GGG | + | chr6_1:8834507-8834526 | None:intergenic | 50.0% | |
| CCATTTCCAAGTGCAGCATC+TGG | + | chr6_1:8835144-8835163 | None:intergenic | 50.0% | |
| CCAGATGCTGCACTTGGAAA+TGG | - | chr6_1:8835141-8835160 | Msa0873220:intron | 50.0% | |
| GATGCTGCACTTGGAAATGG+GGG | - | chr6_1:8835144-8835163 | Msa0873220:intron | 50.0% | |
| ACGCCTTGCGTCATGTTTCT+TGG | - | chr6_1:8835173-8835192 | Msa0873220:intron | 50.0% | |
| AACTTCCTCCTGCCCATCTT+TGG | + | chr6_1:8835277-8835296 | None:intergenic | 50.0% | |
| TCTAACAGATGGGCAATCCC+TGG | - | chr6_1:8835400-8835419 | Msa0873220:intron | 50.0% | |
| CTAACAGATGGGCAATCCCT+GGG | - | chr6_1:8835401-8835420 | Msa0873220:intron | 50.0% | |
| ! | AAAGCACACTGAAGCATCCG+AGG | - | chr6_1:8835641-8835660 | Msa0873220:intron | 50.0% |
| CCCTCTATTGAATCATCCCC+AGG | + | chr6_1:8836012-8836031 | None:intergenic | 50.0% | |
| ! | ATCTGCACGGCAACCTTTTC+AGG | + | chr6_1:8836144-8836163 | None:intergenic | 50.0% |
| !! | CATAAGCTCTGGGATGCACA+AGG | + | chr6_1:8836184-8836203 | None:intergenic | 50.0% |
| GCTACAGTCCTAGATCACAG+TGG | + | chr6_1:8836389-8836408 | None:intergenic | 50.0% | |
| ATGCCTCAGGAAGAACAGTG+TGG | + | chr6_1:8836421-8836440 | None:intergenic | 50.0% | |
| GAAATGGAGCATGGACCTGA+TGG | - | chr6_1:8836445-8836464 | Msa0873220:intron | 50.0% | |
| GGTGAAAACTTCGGGAGAAG+AGG | - | chr6_1:8836750-8836769 | Msa0873220:intron | 50.0% | |
| TCGGGAGAAGAGGAAGAAGA+CGG | - | chr6_1:8836760-8836779 | Msa0873220:intron | 50.0% | |
| GGTGAAAACTTCGGGAGAAG+AGG | - | chr6_1:8836750-8836769 | Msa0873220:intron | 50.0% | |
| TCGGGAGAAGAGGAAGAAGA+CGG | - | chr6_1:8836760-8836779 | Msa0873220:intron | 50.0% | |
| ACCACCCACAACACAGAGAT+TGG | + | chr6_1:8837016-8837035 | None:intergenic | 50.0% | |
| GGCCACAACTGCATGAAGTA+TGG | + | chr6_1:8837371-8837390 | None:intergenic | 50.0% | |
| ATGGTGTGACACCAAGGAGA+TGG | - | chr6_1:8837414-8837433 | Msa0873220:CDS | 50.0% | |
| TGACACCAAGGAGATGGATC+AGG | - | chr6_1:8837420-8837439 | Msa0873220:CDS | 50.0% | |
| CAGAACCTGATCCATCTCCT+TGG | + | chr6_1:8837428-8837447 | None:intergenic | 50.0% | |
| AATGGCCCACCCAATGGAAA+AGG | + | chr6_1:8838002-8838021 | None:intergenic | 50.0% | |
| GAGGAGATTTAAGGAGGTCC+AGG | + | chr6_1:8838474-8838493 | None:intergenic | 50.0% | |
| GGGACGTTGGAGGAGATTTA+AGG | + | chr6_1:8838483-8838502 | None:intergenic | 50.0% | |
| !! | TAGCTCAGTTGGTGAGCTCA+GGG | + | chr6_1:8838503-8838522 | None:intergenic | 50.0% |
| CTCACCAACTGAGCTACCTA+CGG | - | chr6_1:8838507-8838526 | Msa0873220:CDS | 50.0% | |
| TCACCAACTGAGCTACCTAC+GGG | - | chr6_1:8838508-8838527 | Msa0873220:CDS | 50.0% | |
| GTGGGTGTCTTCGTAGACTA+AGG | - | chr6_1:8838743-8838762 | Msa0873220:intron | 50.0% | |
| AGGCCTTTGAACCAGACAAC+AGG | - | chr6_1:8838978-8838997 | Msa0873220:intron | 50.0% | |
| CACATTGTCAAACTGGGGCT+TGG | + | chr6_1:8840061-8840080 | None:intergenic | 50.0% | |
| CATGAGCCTTAGCACCAAAG+AGG | + | chr6_1:8840287-8840306 | None:intergenic | 50.0% | |
| GCTGAGAAAAGAAAGAGCGG+AGG | - | chr6_1:8840317-8840336 | Msa0873220:intron | 50.0% | |
| GACCTGATTGGATCCTTGGA+AGG | - | chr6_1:8840665-8840684 | Msa0873220:intron | 50.0% | |
| CCCTAGCTACTTAGAATGCC+AGG | - | chr6_1:8840736-8840755 | Msa0873220:intron | 50.0% | |
| CTACTTAGAATGCCAGGAGG+AGG | - | chr6_1:8840742-8840761 | Msa0873220:intron | 50.0% | |
| ATCGCATGTGGGTGCAGAAA+TGG | - | chr6_1:8841278-8841297 | Msa0873220:intron | 50.0% | |
| AGTACGGTCACTGCTGAACT+TGG | + | chr6_1:8841338-8841357 | None:intergenic | 50.0% | |
| !! | ACTGGTGCCATGTCGTAAGA+AGG | - | chr6_1:8841448-8841467 | Msa0873220:CDS | 50.0% |
| !! | CGTTGGTAACCGCATTGTCG+TGG | + | chr6_1:8832471-8832490 | None:intergenic | 55.0% |
| !! | TGATGATTCGGTTACGGCGG+TGG | + | chr6_1:8832498-8832517 | None:intergenic | 55.0% |
| CCTCGCCGGAACTCTATTTC+CGG | - | chr6_1:8832521-8832540 | Msa0873220:three_prime_UTR | 55.0% | |
| GCGGAGGGAAGAAGAAGATC+TGG | + | chr6_1:8832558-8832577 | None:intergenic | 55.0% | |
| CTGGCTCAAAGCCTCTGCAT+AGG | + | chr6_1:8834508-8834527 | None:intergenic | 55.0% | |
| TAGGAGCCAGATGCTGCACT+TGG | - | chr6_1:8835135-8835154 | Msa0873220:intron | 55.0% | |
| GCACTTGGAAATGGGGGTCT+TGG | - | chr6_1:8835150-8835169 | Msa0873220:intron | 55.0% | |
| CTCAGTCCATAACCCCATGC+TGG | + | chr6_1:8835222-8835241 | None:intergenic | 55.0% | |
| GCACATGATGTCCCCATACC+CGG | - | chr6_1:8835531-8835550 | Msa0873220:intron | 55.0% | |
| !! | GCTCTGGGATGCACAAGGTT+GGG | + | chr6_1:8836179-8836198 | None:intergenic | 55.0% |
| !! | AGCTCTGGGATGCACAAGGT+TGG | + | chr6_1:8836180-8836199 | None:intergenic | 55.0% |
| !!! | ATTGCTTTTTGGGGGGGAGC+CGG | - | chr6_1:8836302-8836321 | Msa0873220:intron | 55.0% |
| GAAGAGGAAGAAGACGGCGA+TGG | - | chr6_1:8836766-8836785 | Msa0873220:intron | 55.0% | |
| GAAGAGGAAGAAGACGGCGA+TGG | - | chr6_1:8836766-8836785 | Msa0873220:intron | 55.0% | |
| GCCAATCTCTGTGTTGTGGG+TGG | - | chr6_1:8837012-8837031 | Msa0873220:CDS | 55.0% | |
| GTGGGTGGTCATGCAGTGAA+TGG | - | chr6_1:8837027-8837046 | Msa0873220:CDS | 55.0% | |
| CTGAGAAACTGGCTGAGCTG+AGG | - | chr6_1:8837510-8837529 | Msa0873220:intron | 55.0% | |
| GAAACTGGCTGAGCTGAGGA+AGG | - | chr6_1:8837514-8837533 | Msa0873220:intron | 55.0% | |
| GTGAGTGTTTGGTCTCGAGG+TGG | + | chr6_1:8837941-8837960 | None:intergenic | 55.0% | |
| !! | GTAGCTCAGTTGGTGAGCTC+AGG | + | chr6_1:8838504-8838523 | None:intergenic | 55.0% |
| CACCAACTGAGCTACCTACG+GGG | - | chr6_1:8838509-8838528 | Msa0873220:CDS | 55.0% | |
| ACCAACTGAGCTACCTACGG+GGG | - | chr6_1:8838510-8838529 | Msa0873220:CDS | 55.0% | |
| ACTGCTGGAATGGAGGCAAG+TGG | - | chr6_1:8840159-8840178 | Msa0873220:intron | 55.0% | |
| GTTACGGCGGTGGTGTTCGT+TGG | + | chr6_1:8832488-8832507 | None:intergenic | 60.0% | |
| CCGGAAATAGAGTTCCGGCG+AGG | + | chr6_1:8832524-8832543 | None:intergenic | 60.0% | |
| ! | GGCGCTGGACGCAAGATAAC+TGG | + | chr6_1:8834010-8834029 | None:intergenic | 60.0% |
| !! | GCAGAGGCTTTGAGCCAGCT+TGG | - | chr6_1:8834510-8834529 | Msa0873220:intron | 60.0% |
| !! | GGTGGTTCTGGTACTGGCTC+AGG | + | chr6_1:8836976-8836995 | None:intergenic | 60.0% |
| AGTTTCCCAGGGTCGAACCC+TGG | - | chr6_1:8838453-8838472 | Msa0873220:CDS | 60.0% | |
| ! | GTTGGTGAGCTCAGGGACGT+TGG | + | chr6_1:8838496-8838515 | None:intergenic | 60.0% |
| TCCCCCGTAGGTAGCTCAGT+TGG | + | chr6_1:8838514-8838533 | None:intergenic | 60.0% | |
| CATACCTGGATGTCCCCCGT+AGG | + | chr6_1:8838526-8838545 | None:intergenic | 60.0% | |
| CTACGGGGGACATCCAGGTA+TGG | - | chr6_1:8838524-8838543 | Msa0873220:CDS | 60.0% | |
| AAGCTTCGTCGACCTCCTCC+TGG | + | chr6_1:8840757-8840776 | None:intergenic | 60.0% | |
| GAGGTCCAGGGTTCGACCCT+GGG | + | chr6_1:8838461-8838480 | None:intergenic | 65.0% | |
| GGTGAGCTCAGGGACGTTGG+AGG | + | chr6_1:8838493-8838512 | None:intergenic | 65.0% | |
| GCTACCTACGGGGGACATCC+AGG | - | chr6_1:8838519-8838538 | Msa0873220:CDS | 65.0% | |
| GGAGGTCCAGGGTTCGACCC+TGG | + | chr6_1:8838462-8838481 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 8832298 | 8841778 | 8832298 | ID=Msa0873220;Name=Msa0873220 |
| chr6_1 | mRNA | 8832298 | 8841778 | 8832298 | ID=Msa0873220-mRNA-1;Parent=Msa0873220;Name=Msa0873220-mRNA-1;_AED=0.07;_eAED=0.07;_QI=163|0.92|1|1|1|1|14|367|972 |
| chr6_1 | exon | 8832298 | 8832781 | 8832298 | ID=Msa0873220-mRNA-1:exon:2708;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8833286 | 8833486 | 8833286 | ID=Msa0873220-mRNA-1:exon:2707;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8833732 | 8833918 | 8833732 | ID=Msa0873220-mRNA-1:exon:2706;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8834107 | 8834183 | 8834107 | ID=Msa0873220-mRNA-1:exon:2705;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8834533 | 8834769 | 8834533 | ID=Msa0873220-mRNA-1:exon:2704;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8836541 | 8836693 | 8836541 | ID=Msa0873220-mRNA-1:exon:2703;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8836969 | 8837484 | 8836969 | ID=Msa0873220-mRNA-1:exon:2702;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8837559 | 8837676 | 8837559 | ID=Msa0873220-mRNA-1:exon:2701;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8837814 | 8838085 | 8837814 | ID=Msa0873220-mRNA-1:exon:2700;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8838393 | 8838668 | 8838393 | ID=Msa0873220-mRNA-1:exon:2699;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8838762 | 8838938 | 8838762 | ID=Msa0873220-mRNA-1:exon:2698;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8839516 | 8839617 | 8839516 | ID=Msa0873220-mRNA-1:exon:2697;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8839702 | 8839940 | 8839702 | ID=Msa0873220-mRNA-1:exon:2696;Parent=Msa0873220-mRNA-1 |
| chr6_1 | exon | 8841369 | 8841778 | 8841369 | ID=Msa0873220-mRNA-1:exon:2695;Parent=Msa0873220-mRNA-1 |
| chr6_1 | five_prime_UTR | 8841616 | 8841778 | 8841616 | ID=Msa0873220-mRNA-1:five_prime_utr;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8841369 | 8841615 | 8841369 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8839702 | 8839940 | 8839702 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8839516 | 8839617 | 8839516 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8838762 | 8838938 | 8838762 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8838393 | 8838668 | 8838393 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8837814 | 8838085 | 8837814 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8837559 | 8837676 | 8837559 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8836969 | 8837484 | 8836969 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8836541 | 8836693 | 8836541 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8834533 | 8834769 | 8834533 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8834107 | 8834183 | 8834107 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8833732 | 8833918 | 8833732 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8833286 | 8833486 | 8833286 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | CDS | 8832665 | 8832781 | 8832665 | ID=Msa0873220-mRNA-1:cds;Parent=Msa0873220-mRNA-1 |
| chr6_1 | three_prime_UTR | 8832298 | 8832664 | 8832298 | ID=Msa0873220-mRNA-1:three_prime_utr;Parent=Msa0873220-mRNA-1 |
| Gene Sequence |
| Protein sequence |