AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1325830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1325830 MtrunA17_Chr8g0360401 99.258 809 6 0 1 809 1 809 0.0 1669
Msa1325830 MtrunA17_Chr4g0050661 30.233 559 352 13 27 564 21 562 2.64e-62 224
Msa1325830 MtrunA17_Chr7g0233071 33.333 186 119 2 46 231 40 220 8.59e-20 94.4
Msa1325830 MtrunA17_Chr8g0337041 32.632 190 115 4 46 231 40 220 1.20e-18 90.9
Msa1325830 MtrunA17_Chr8g0388271 31.754 211 129 3 31 231 9 214 1.72e-18 90.1
Msa1325830 MtrunA17_Chr5g0396561 31.963 219 119 6 31 231 9 215 4.57e-18 89.0
Msa1325830 MtrunA17_Chr8g0391891 25.698 358 222 9 31 372 12 341 3.45e-17 85.9
Msa1325830 MtrunA17_Chr4g0055051 29.858 211 133 3 31 231 9 214 8.49e-17 84.7
Msa1325830 MtrunA17_Chr8g0379961 29.555 247 155 8 11 253 37 268 4.94e-16 82.4
Msa1325830 MtrunA17_Chr8g0346971 29.464 224 133 5 27 231 5 222 4.16e-15 79.3
Msa1325830 MtrunA17_Chr4g0049731 30.288 208 128 4 31 231 20 217 8.45e-15 78.6
Msa1325830 MtrunA17_Chr8g0379941 28.516 256 160 9 11 257 40 281 3.43e-14 76.6
Msa1325830 MtrunA17_Chr2g0279671 29.187 209 129 4 31 231 29 226 1.98e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1325830 AT1G53140.1 76.248 821 167 8 5 809 9 817 0.0 1254
Msa1325830 AT3G19720.2 30.906 563 347 14 25 564 27 570 1.98e-60 218
Msa1325830 AT3G19720.1 30.906 563 347 14 25 564 27 570 2.12e-60 219
Msa1325830 AT3G19720.3 29.599 598 345 16 25 564 27 606 4.71e-55 204
Msa1325830 AT1G60530.1 28.736 261 159 7 1 253 21 262 9.45e-20 91.3
Msa1325830 AT3G60190.1 32.796 186 120 2 46 231 40 220 9.55e-20 94.7
Msa1325830 AT3G61760.2 31.754 211 129 4 31 231 9 214 2.18e-18 90.1
Msa1325830 AT3G61760.3 26.786 336 218 9 31 356 9 326 2.28e-18 89.4
Msa1325830 AT3G61760.1 31.754 211 129 4 31 231 9 214 2.64e-18 90.1
Msa1325830 AT1G14830.1 26.722 363 227 11 24 372 5 342 3.52e-18 89.7
Msa1325830 AT2G44590.3 31.183 186 123 2 46 231 35 215 7.21e-18 88.6
Msa1325830 AT1G60500.1 29.918 244 153 6 12 253 38 265 4.04e-17 86.3
Msa1325830 AT5G42080.2 30.045 223 140 4 31 243 9 225 7.45e-17 84.3
Msa1325830 AT5G42080.4 30.332 211 132 3 31 231 9 214 1.33e-16 84.7
Msa1325830 AT5G42080.1 30.332 211 132 3 31 231 9 214 1.33e-16 84.7
Msa1325830 AT5G42080.3 30.332 211 132 3 31 231 9 214 1.38e-16 84.7
Msa1325830 AT4G33650.2 29.524 210 132 4 31 231 42 244 5.44e-14 76.6
Msa1325830 AT4G33650.1 29.524 210 132 4 31 231 42 244 5.77e-14 76.6
Msa1325830 AT2G14120.3 30.189 212 129 6 31 231 26 229 1.62e-12 71.6
Msa1325830 AT2G14120.2 30.189 212 129 6 31 231 26 229 1.63e-12 71.6
Msa1325830 AT2G14120.1 30.189 212 129 6 31 231 26 229 1.74e-12 71.6
Msa1325830 AT2G14120.4 30.189 212 129 6 31 231 26 229 2.70e-12 70.9
Msa1325830 AT2G44590.2 26.882 186 114 3 46 231 35 198 4.46e-11 67.0
Msa1325830 AT2G44590.1 26.882 186 114 3 46 231 35 198 4.58e-11 67.0

Find 249 sgRNAs with CRISPR-Local

Find 417 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACGGCAACAATTTC+AGG 0.151688 8_4:-38525890 None:intergenic
CTCCCCATTTCCAAATAAAA+TGG 0.180476 8_4:-38529201 None:intergenic
CTTGAGACGATTATCAAATT+TGG 0.197072 8_4:-38526677 None:intergenic
AATGCCAGTCTTCGTCTTTA+TGG 0.202478 8_4:+38527772 Msa1325830:CDS
GGATGTGGATGGGGTCTTTG+TGG 0.207238 8_4:-38525771 None:intergenic
TGCTTACACTCGGTTCTTAA+AGG 0.218343 8_4:+38528719 Msa1325830:CDS
ATTCTAGACGCTCTCTTTCT+TGG 0.228334 8_4:-38529131 None:intergenic
CAAGCCGCTGCTGTCGCTTT+TGG 0.241620 8_4:+38525851 Msa1325830:CDS
CGCAATTCAGGTCAACAAAT+TGG 0.253583 8_4:+38530226 Msa1325830:three_prime_UTR
TTCAAGTCCTATATTGGTTT+TGG 0.261984 8_4:+38527297 Msa1325830:CDS
CTCAAAGTGGCATTGGGATT+TGG 0.268460 8_4:+38527719 Msa1325830:CDS
CCAGTGTTGCATTCTTTAGA+TGG 0.279464 8_4:-38530284 None:intergenic
GAAAAGTTCAAGTCCTATAT+TGG 0.282691 8_4:+38527291 Msa1325830:CDS
TTTAGGAAGCTTATTTGATT+TGG 0.292118 8_4:+38528121 Msa1325830:CDS
TGACGAGACCCTCTGTAATT+TGG 0.297105 8_4:+38530253 Msa1325830:three_prime_UTR
TGGCCGTCTGAGGGATTATT+TGG 0.298187 8_4:+38527317 Msa1325830:CDS
CACGTATACGTGCGAAATGC+TGG 0.302416 8_4:-38529265 None:intergenic
TGAACCTCGCTGCCGCTTCC+AGG 0.309515 8_4:+38526036 Msa1325830:CDS
GTTGACCTGAATTGCGTCAT+AGG 0.333781 8_4:-38530219 None:intergenic
AGAAGAGAAGAGAGGGGAAA+AGG 0.338291 8_4:-38525687 None:intergenic
TGATCAGGAGATGGGGTCTC+AGG 0.345824 8_4:-38529047 None:intergenic
AAGTAGCAGACCTGTGAGTA+TGG 0.356134 8_4:-38528798 None:intergenic
GATCGCCTTGTTGTGGCTCT+CGG 0.357701 8_4:+38529968 Msa1325830:CDS
TGGGGTCTTTGTGGGAGTGG+TGG 0.361834 8_4:-38525762 None:intergenic
GTGAACCTATGACGCAATTC+AGG 0.362569 8_4:+38530214 Msa1325830:three_prime_UTR
GGTCTTTGTGGGAGTGGTGG+TGG 0.363072 8_4:-38525759 None:intergenic
CTTGACCGGGTGGATGTGGA+TGG 0.367812 8_4:-38525782 None:intergenic
CACTTGTGAACTTGCTGGAT+TGG 0.368508 8_4:+38527416 Msa1325830:CDS
CTTAGGAGAAACTGCCGTTT+TGG 0.369840 8_4:-38526304 None:intergenic
AGAGAAGAGAGGGGAAAAGG+AGG 0.369915 8_4:-38525684 None:intergenic
GTAAGCTTCGAAGCGAGATT+TGG 0.370913 8_4:-38525819 None:intergenic
GTATGGAAGTCCGGTGGTTT+CGG 0.371097 8_4:+38526227 Msa1325830:CDS
GAGAAGAGAGGGGAAAAGGA+GGG 0.374606 8_4:-38525683 None:intergenic
TGTGGCCCTGCCTAAGGATA+GGG 0.377422 8_4:+38527170 Msa1325830:CDS
GATGTGGATGGGGTCTTTGT+GGG 0.379532 8_4:-38525770 None:intergenic
CAGCCAGGTGATCCTGTATA+TGG 0.379808 8_4:+38529068 Msa1325830:CDS
ACAGGATCACCTGGCTGATC+AGG 0.382456 8_4:-38529062 None:intergenic
GAGGAAGATTCAGAAGAGTA+TGG 0.382821 8_4:+38526210 Msa1325830:CDS
TTGCCCATGCTGGCCGTGGT+GGG 0.388263 8_4:+38527997 Msa1325830:CDS
AATTTGTAGCTAAAGCTAAA+AGG 0.392145 8_4:-38530491 None:intergenic
CAACAGGGTGCCTTGATTGA+TGG 0.394945 8_4:+38527643 Msa1325830:intron
AATCGGAGTGCTTTCTTGAC+CGG 0.402487 8_4:-38525796 None:intergenic
TTGTGGCCCTGCCTAAGGAT+AGG 0.402756 8_4:+38527169 Msa1325830:CDS
ATGCAGCACAACGAAATTCA+TGG 0.404160 8_4:-38527819 None:intergenic
TTGACCGGGTGGATGTGGAT+GGG 0.404185 8_4:-38525781 None:intergenic
AAACCCCGGTGTGTCAATAA+TGG 0.405689 8_4:-38526370 None:intergenic
TGAACTCATTCAAGCAAGAA+TGG 0.407252 8_4:-38530105 None:intergenic
GAGGTCACTTGTGAACTTGC+TGG 0.409027 8_4:+38527411 Msa1325830:CDS
CCTTGTTGTGGCTCTCGGGT+TGG 0.414030 8_4:+38529973 Msa1325830:CDS
TGGAATGGTGCTCCTCTTTG+TGG 0.415237 8_4:+38526599 Msa1325830:CDS
TGCCCATGCTGGCCGTGGTG+GGG 0.417141 8_4:+38527998 Msa1325830:CDS
TATTCAGCTTTGAGTACAAT+TGG 0.418369 8_4:-38526327 None:intergenic
CAGACGGCCAAAACCAATAT+AGG 0.424479 8_4:-38527304 None:intergenic
TTTGGAAATGGGGAGAGAAC+AGG 0.425343 8_4:+38529209 Msa1325830:CDS
GCGTCTAGAATGACAGGAAA+TGG 0.428588 8_4:+38529143 Msa1325830:CDS
GCCCATGCTGGCCGTGGTGG+GGG 0.428625 8_4:+38527999 Msa1325830:CDS
GGGTCTCAGGGATAGTCATC+TGG 0.431491 8_4:-38529034 None:intergenic
TTTCTATGCCCTCCATATAC+AGG 0.431806 8_4:-38529080 None:intergenic
ATGACATGGTGGTGTCTGTT+TGG 0.436481 8_4:-38525736 None:intergenic
GCTGAAGGAACAAGAGTATA+CGG 0.438622 8_4:-38526567 None:intergenic
GGGAGTGGTGGTGGATGACA+TGG 0.438859 8_4:-38525750 None:intergenic
GGTTATCTTCAAAAGTGCTT+CGG 0.440026 8_4:-38526283 None:intergenic
AGTCGGTAATCTGAAATTAG+AGG 0.444330 8_4:+38530363 Msa1325830:three_prime_UTR
AGAGAAAAGAAGAGAAGAGA+GGG 0.446421 8_4:-38525694 None:intergenic
GCTTTGAGTACAATTGGCTT+AGG 0.447637 8_4:-38526321 None:intergenic
TAGAAGCTTACCAAGGAGTC+AGG 0.448083 8_4:-38529334 None:intergenic
ATGGTGCTCCTCTTTGTGGT+TGG 0.449775 8_4:+38526603 Msa1325830:CDS
CATGACATCTATCGATCATA+AGG 0.452181 8_4:-38530546 None:intergenic
AAGAGAGCGTCTAGAATGAC+AGG 0.452216 8_4:+38529137 Msa1325830:CDS
TTACTTTCAAAAGGAAATGT+TGG 0.452406 8_4:+38530523 Msa1325830:three_prime_UTR
AGAAGAGAGGGGAAAAGGAG+GGG 0.454857 8_4:-38525682 None:intergenic
ATGGACATGTTTGTCGCTCC+TGG 0.456326 8_4:+38530025 Msa1325830:CDS
ATCTCATCAGGCGTGTTCTC+CGG 0.457464 8_4:-38526508 None:intergenic
CCTGAAATTGTTGCCGTTGG+TGG 0.458140 8_4:+38525890 Msa1325830:CDS
GGATGGGGTCTTTGTGGGAG+TGG 0.462001 8_4:-38525765 None:intergenic
CAGTGTTGCATTCTTTAGAT+GGG 0.462728 8_4:-38530283 None:intergenic
TGAAGCATTTGAAGAATAAG+AGG 0.464570 8_4:-38525998 None:intergenic
CGTGAAGTTCTTGTTGAAAG+AGG 0.465409 8_4:+38529284 Msa1325830:CDS
ACGTTTAAGTTACTTTCAAA+AGG 0.465748 8_4:+38530514 Msa1325830:three_prime_UTR
GAGCGCTCTCAAAGTGGCAT+TGG 0.468613 8_4:+38527712 Msa1325830:CDS
TGACCGGGTGGATGTGGATG+GGG 0.468953 8_4:-38525780 None:intergenic
TCAAGCAAGGCAAGAGTTGA+TGG 0.470376 8_4:-38527375 None:intergenic
GTGTCAATAATGGTGAGATT+TGG 0.471209 8_4:-38526360 None:intergenic
CTTGCCCATGCTGGCCGTGG+TGG 0.471756 8_4:+38527996 Msa1325830:CDS
AAGCGACAGCAGCGGCTTGG+AGG 0.473813 8_4:-38525847 None:intergenic
CGACAGCAGCGGCTTGGAGG+CGG 0.476508 8_4:-38525844 None:intergenic
AGCAGTGCAAGCAGCTTGTT+AGG 0.478959 8_4:+38528751 Msa1325830:CDS
GGGAGCTCTTTCCATCAGAT+TGG 0.479145 8_4:-38525913 None:intergenic
CTTTAAGGTGTGCTTACACT+CGG 0.479890 8_4:+38528709 Msa1325830:CDS
CTTTCTTGACCGGGTGGATG+TGG 0.481008 8_4:-38525786 None:intergenic
AGCGCTCTCAAAGTGGCATT+GGG 0.483489 8_4:+38527713 Msa1325830:CDS
ACATGCAGGAATTTACTGAT+AGG 0.484315 8_4:+38527085 Msa1325830:intron
CAAAAGCGACAGCAGCGGCT+TGG 0.487855 8_4:-38525850 None:intergenic
ACTCTGGATTCCTGACTCCT+TGG 0.488697 8_4:+38529324 Msa1325830:CDS
GAAATGTTGCCCCTATCCTT+AGG 0.488777 8_4:-38527180 None:intergenic
AATATATTACTTGCCCATGC+TGG 0.490800 8_4:+38527987 Msa1325830:CDS
AGTGGCATTGGGATTTGGCC+TGG 0.491111 8_4:+38527724 Msa1325830:CDS
AAATGAAGAGGCTGAAGCCT+GGG 0.492594 8_4:-38528874 None:intergenic
ATTCTGCTTCTCATGATGTA+AGG 0.492714 8_4:+38528919 Msa1325830:CDS
TGTTGCCCCTATCCTTAGGC+AGG 0.492947 8_4:-38527176 None:intergenic
TTCACATCGGTGATGACGCC+AGG 0.493106 8_4:-38527742 None:intergenic
CACACCGGGGTTTGTTCTCA+AGG 0.496399 8_4:+38526380 Msa1325830:CDS
TTGAGTGCAAGTGGTTACCT+TGG 0.496456 8_4:+38527126 Msa1325830:CDS
AAAATGAAGAGGCTGAAGCC+TGG 0.498478 8_4:-38528875 None:intergenic
TTCAGAAGAGTATGGAAGTC+CGG 0.500297 8_4:+38526218 Msa1325830:CDS
TACCTATTGTTAAAACTCAA+AGG 0.500970 8_4:-38530572 None:intergenic
GCAGATCTCTCATGTGGACT+CGG 0.503415 8_4:+38527221 Msa1325830:CDS
CAATGTCCGTGAAGTTGAGA+TGG 0.505101 8_4:+38525964 Msa1325830:CDS
CCAGTCTTCGTCTTTATGGA+GGG 0.505627 8_4:+38527776 Msa1325830:CDS
TCCCTTCTCGAAGCACTCCT+CGG 0.506447 8_4:+38525932 Msa1325830:CDS
ATGGAGGGGCTGCATTTGAG+AGG 0.509770 8_4:+38527791 Msa1325830:CDS
ATCGGAGTGCTTTCTTGACC+GGG 0.510588 8_4:-38525795 None:intergenic
TGTGAACGATGAGAAATTCA+TGG 0.512127 8_4:+38530006 Msa1325830:CDS
AGTGGTGGTGGATGACATGG+TGG 0.512129 8_4:-38525747 None:intergenic
ATCTGCTGCACCATCAATCA+AGG 0.512415 8_4:-38527653 None:intergenic
CTCACCATTATTGACACACC+GGG 0.513588 8_4:+38526366 Msa1325830:CDS
TTTGTATGGTAGGCGAAGAA+GGG 0.513608 8_4:+38526481 Msa1325830:intron
ACGTATACGTGCGAAATGCT+GGG 0.513649 8_4:-38529264 None:intergenic
ATAAAGACGAAGACTGGCAT+TGG 0.514072 8_4:-38527770 None:intergenic
ATCTAGTAACTCTAATCAAA+GGG 0.514624 8_4:-38530143 None:intergenic
GATCTAGTAACTCTAATCAA+AGG 0.515206 8_4:-38530144 None:intergenic
CACCTGGCTGATCAGGAGAT+GGG 0.515425 8_4:-38529055 None:intergenic
AAATTGATCCCACGTTTAGA+CGG 0.515819 8_4:+38526638 Msa1325830:CDS
AAGAGAAAAGAAGAGAAGAG+AGG 0.516764 8_4:-38525695 None:intergenic
TGGTGTCTGTTTGGTAAGTA+AGG 0.518740 8_4:-38525727 None:intergenic
GAAACTTGAAGCGTTTATGC+CGG 0.520142 8_4:-38528841 None:intergenic
GCCAGTCTTCGTCTTTATGG+AGG 0.520177 8_4:+38527775 Msa1325830:CDS
ATTTACTGATAGGTGGGAAG+TGG 0.521827 8_4:+38527095 Msa1325830:CDS
GTAGGCGAAGAAGGGTGAAC+CGG 0.523086 8_4:+38526489 Msa1325830:intron
TCACCTGGCTGATCAGGAGA+TGG 0.523556 8_4:-38529056 None:intergenic
CACCAACGGCAACAATTTCA+GGG 0.530283 8_4:-38525889 None:intergenic
ATCCCTGAAATTGTTGCCGT+TGG 0.530967 8_4:+38525887 Msa1325830:CDS
GGAAACATGGATGGCTATGT+AGG 0.531101 8_4:+38528675 Msa1325830:CDS
ACCATGGAAAGAATCTCATC+AGG 0.532315 8_4:-38526520 None:intergenic
CTCTTGCCTTGCTTGAGCAA+AGG 0.532479 8_4:+38527382 Msa1325830:CDS
TCCATCAGATTGGCCACCAA+CGG 0.533133 8_4:-38525903 None:intergenic
GCCTGATGAGATTCTTTCCA+TGG 0.536247 8_4:+38526519 Msa1325830:CDS
TCATCTCCGCGATGGTGTCA+AGG 0.537521 8_4:+38527254 Msa1325830:CDS
TCTTTCCATGGTGAAGACAT+TGG 0.538252 8_4:+38526531 Msa1325830:CDS
ACGGCAACAATTTCAGGGAT+GGG 0.539046 8_4:-38525884 None:intergenic
TAAAGACGAAGACTGGCATT+GGG 0.541789 8_4:-38527769 None:intergenic
AAGTTTCAACAAATTTCCCC+AGG 0.541943 8_4:+38528857 Msa1325830:CDS
ATAGCAAAACCATGGCTCCT+TGG 0.542677 8_4:-38530168 None:intergenic
ACCTCCAGAAAAGAATGCAC+TGG 0.543318 8_4:+38528959 Msa1325830:CDS
CCCTCCATAAAGACGAAGAC+TGG 0.543941 8_4:-38527776 None:intergenic
CACGTGCTGCTGCTAGATCA+TGG 0.544481 8_4:+38528054 Msa1325830:CDS
TTCGAAGCGAGATTTGGAAT+CGG 0.545179 8_4:-38525813 None:intergenic
TCTGATCATCAGCATTCAGC+AGG 0.547357 8_4:-38530423 None:intergenic
AACGGCAACAATTTCAGGGA+TGG 0.548624 8_4:-38525885 None:intergenic
GAGAAAAGAAGAGAAGAGAG+GGG 0.552290 8_4:-38525693 None:intergenic
TGCAGGAATTTACTGATAGG+TGG 0.552513 8_4:+38527088 Msa1325830:intron
GATCAGGAGATGGGGTCTCA+GGG 0.554324 8_4:-38529046 None:intergenic
ACCGAGGAGTGCTTCGAGAA+GGG 0.554409 8_4:-38525933 None:intergenic
AATGACTTTCAACCATGTGC+CGG 0.555549 8_4:+38528822 Msa1325830:CDS
AACCGAGGAGTGCTTCGAGA+AGG 0.556754 8_4:-38525934 None:intergenic
CCTCCATATACAGGATCACC+TGG 0.558162 8_4:-38529071 None:intergenic
TGTATATGGAGGGCATAGAA+AGG 0.559667 8_4:+38529082 Msa1325830:CDS
CGGCAACAATTTCAGGGATG+GGG 0.560566 8_4:-38525883 None:intergenic
CAGCGAGGTTCAAGAGCAGA+GGG 0.562387 8_4:-38526025 None:intergenic
GGAGGGCATAGAAAGGAGCT+TGG 0.564041 8_4:+38529089 Msa1325830:CDS
TGCTTCTCATGATGTAAGGA+GGG 0.564181 8_4:+38528923 Msa1325830:CDS
CTTCAGATATTTCTCATCTG+AGG 0.564677 8_4:+38527457 Msa1325830:CDS
AAGGGCGAGTGTTGTCTCCA+AGG 0.564899 8_4:-38527143 None:intergenic
AGCTAGATTTACTCAGTAGT+CGG 0.565091 8_4:+38530346 Msa1325830:three_prime_UTR
CAGATGAGAAATATCTGAAG+TGG 0.566937 8_4:-38527454 None:intergenic
ACCCCATCTCCTGATCAGCC+AGG 0.569139 8_4:+38529053 Msa1325830:CDS
GCAGCGAGGTTCAAGAGCAG+AGG 0.570333 8_4:-38526026 None:intergenic
GCAGGAATTTACTGATAGGT+GGG 0.575162 8_4:+38527089 Msa1325830:intron
ATTCCACACTACTTTGCTGA+AGG 0.577379 8_4:-38526582 None:intergenic
ATGGACTGGTAACTGAATCA+AGG 0.577837 8_4:-38528779 None:intergenic
TGAATGAATTTACCTGGAAG+CGG 0.577927 8_4:-38526048 None:intergenic
CTGCTTCTCATGATGTAAGG+AGG 0.579370 8_4:+38528922 Msa1325830:CDS
GAGCCACAACAAGGCGATCG+CGG 0.580908 8_4:-38529964 None:intergenic
GTGGCCCTGCCTAAGGATAG+GGG 0.581037 8_4:+38527171 Msa1325830:CDS
TTTCAAATGAAGAGTTCCGC+AGG 0.581321 8_4:+38527199 Msa1325830:CDS
GAGTACCCATCTCAACTTCA+CGG 0.582067 8_4:-38525970 None:intergenic
GCCGTTGGTGGCCAATCTGA+TGG 0.582734 8_4:+38525902 Msa1325830:CDS
GACGAAGACTGGCATTGGGA+GGG 0.583777 8_4:-38527765 None:intergenic
TGTAGCACATCTATGGCACC+AGG 0.584087 8_4:-38530043 None:intergenic
CAAATTTGATAATCGTCTCA+AGG 0.587563 8_4:+38526678 Msa1325830:CDS
CATCTCCGCGATGGTGTCAA+GGG 0.588015 8_4:+38527255 Msa1325830:CDS
GAAGCGTTTATGCCGGCACA+TGG 0.592289 8_4:-38528834 None:intergenic
TGGAGGGGCTGCATTTGAGA+GGG 0.593307 8_4:+38527792 Msa1325830:CDS
GCTTGGAATATGCAATGACA+TGG 0.594337 8_4:+38529106 Msa1325830:CDS
ACTAGATCTCCAAGGAGCCA+TGG 0.595731 8_4:+38530159 Msa1325830:three_prime_UTR
ATCGTAGATGCCGAAACCAC+CGG 0.600918 8_4:-38526237 None:intergenic
ACCTGGCTGATCAGGAGATG+GGG 0.601811 8_4:-38529054 None:intergenic
CCAGGTGATCCTGTATATGG+AGG 0.602528 8_4:+38529071 Msa1325830:CDS
ATTCAGCAGGTAAGTGAATG+TGG 0.602936 8_4:-38530410 None:intergenic
CAGCCGCGATCGCCTTGTTG+TGG 0.604218 8_4:+38529961 Msa1325830:intron
TTCAGCAAAGTAGTGTGGAA+TGG 0.605436 8_4:+38526584 Msa1325830:CDS
CAGTCTTCGTCTTTATGGAG+GGG 0.605567 8_4:+38527777 Msa1325830:CDS
AATGTCCGTGAAGTTGAGAT+GGG 0.609276 8_4:+38525965 Msa1325830:CDS
TACATGCTGAATCATGCCTA+CGG 0.610062 8_4:-38528157 None:intergenic
CTCCGCGATGGTGTCAAGGG+AGG 0.611557 8_4:+38527258 Msa1325830:CDS
GCAGACCTGTGAGTATGGAC+TGG 0.612333 8_4:-38528793 None:intergenic
TCTCACCATTATTGACACAC+CGG 0.612491 8_4:+38526365 Msa1325830:CDS
GATCGCTATTTGAGTGCAAG+TGG 0.616547 8_4:+38527117 Msa1325830:CDS
AGACGAAGACTGGCATTGGG+AGG 0.616745 8_4:-38527766 None:intergenic
CCATCTAAAGAATGCAACAC+TGG 0.618459 8_4:+38530284 Msa1325830:three_prime_UTR
CCAACCCGAGAGCCACAACA+AGG 0.618603 8_4:-38529973 None:intergenic
AATGATTGTCCGTCTAAACG+TGG 0.620311 8_4:-38526647 None:intergenic
CAGGTGATCCTGTATATGGA+GGG 0.623092 8_4:+38529072 Msa1325830:CDS
ACTACACCTTTGCTCAAGCA+AGG 0.627943 8_4:-38527388 None:intergenic
AATAGAGTCCAACCACAAAG+AGG 0.628614 8_4:-38526611 None:intergenic
GTTCCTTCAGCAAAGTAGTG+TGG 0.629139 8_4:+38526579 Msa1325830:CDS
CTCGCCAAAAGCGACAGCAG+CGG 0.632128 8_4:-38525855 None:intergenic
TCACATGCAGTATCAAGAAG+AGG 0.637274 8_4:-38528083 None:intergenic
ACTCCAAATAATCCCTCAGA+CGG 0.637546 8_4:-38527320 None:intergenic
AGTTACCAGTCCATACTCAC+AGG 0.637819 8_4:+38528788 Msa1325830:CDS
GTTATGCATCATCTCCGCGA+TGG 0.637901 8_4:+38527246 Msa1325830:CDS
CTTGGAATATGCAATGACAT+GGG 0.638221 8_4:+38529107 Msa1325830:CDS
TCCAGAAAAGAATGCACTGG+AGG 0.638622 8_4:+38528962 Msa1325830:CDS
AGCTTCCTAAAACAAAAGCA+AGG 0.639138 8_4:-38528109 None:intergenic
AATGAAGAGGCTGAAGCCTG+GGG 0.640485 8_4:-38528873 None:intergenic
GCACTGGAGGAAACAACACC+AGG 0.642547 8_4:+38528975 Msa1325830:CDS
ATCAAAGCATAGCAAAACCA+TGG 0.645243 8_4:-38530176 None:intergenic
TTACTTGCCCATGCTGGCCG+TGG 0.645965 8_4:+38527993 Msa1325830:CDS
AGACCCCATCCACATCCACC+CGG 0.647245 8_4:+38525777 Msa1325830:CDS
AACAAGAGTATACGGTGTGG+AGG 0.647370 8_4:-38526559 None:intergenic
GAAGCATTTGAAGAATAAGA+GGG 0.647522 8_4:-38525997 None:intergenic
GTTACATCGACATTAAACTC+TGG 0.649396 8_4:+38529308 Msa1325830:CDS
GTTGCCCCTATCCTTAGGCA+GGG 0.652941 8_4:-38527175 None:intergenic
CCGCAGGCAGATCTCTCATG+TGG 0.657902 8_4:+38527215 Msa1325830:CDS
TTAGAGTTACTAGATCTCCA+AGG 0.663188 8_4:+38530151 Msa1325830:three_prime_UTR
GTAGAAGAGCGCTCTCAAAG+TGG 0.664744 8_4:+38527706 Msa1325830:CDS
GGAGTGCTTTCTTGACCGGG+TGG 0.664871 8_4:-38525792 None:intergenic
TTGGAATATGCAATGACATG+GGG 0.665817 8_4:+38529108 Msa1325830:CDS
TTACACATGCTTCAACACGC+AGG 0.667443 8_4:-38530322 None:intergenic
GGTATAATACCAAATTACAG+AGG 0.676272 8_4:-38530262 None:intergenic
AGTAGCCAATGTCTTCACCA+TGG 0.677040 8_4:-38526536 None:intergenic
AGAAGAGTATGGAAGTCCGG+TGG 0.677609 8_4:+38526221 Msa1325830:CDS
GATCTCTCATGTGGACTCGG+AGG 0.678782 8_4:+38527224 Msa1325830:CDS
GTATAATACCAAATTACAGA+GGG 0.679020 8_4:-38530261 None:intergenic
GGCATTGGGAGGGTTCACAT+CGG 0.679566 8_4:-38527755 None:intergenic
AGCTTCTATCAGCAACCATG+TGG 0.680329 8_4:+38527500 Msa1325830:CDS
GCTTGAGCAAAGGTGTAGTG+AGG 0.681974 8_4:+38527392 Msa1325830:CDS
TGGCTCTAGAAAGAAACCGT+AGG 0.694098 8_4:+38528141 Msa1325830:CDS
ATGATTGTCCGTCTAAACGT+GGG 0.703297 8_4:-38526646 None:intergenic
GCATTTGAAGAATAAGAGGG+CGG 0.705612 8_4:-38525994 None:intergenic
AATACCTTGAGAACAAACCC+CGG 0.725703 8_4:-38526384 None:intergenic
TTTACCTGGAAGCGGCAGCG+AGG 0.731620 8_4:-38526040 None:intergenic
AACCTCCCTTGACACCATCG+CGG 0.733484 8_4:-38527260 None:intergenic
GGACATTGAAGCGAAAACCG+AGG 0.735109 8_4:-38525949 None:intergenic
CCACATGAGAGATCTGCCTG+CGG 0.735319 8_4:-38527215 None:intergenic
TTCCTAAAACAAAAGCAAGG+CGG 0.747988 8_4:-38528106 None:intergenic
AGGAACAAGAGTATACGGTG+TGG 0.749192 8_4:-38526562 None:intergenic
TCACCATTATTGACACACCG+GGG 0.774544 8_4:+38526367 Msa1325830:CDS
GACTGGTAACTGAATCAAGG+TGG 0.786961 8_4:-38528776 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAACTTTG+AGG - chr8_4:38529637-38529656 None:intergenic 10.0%
!!! TTTGTTAATTCATGTAATTT+TGG + chr8_4:38526148-38526167 Msa1325830:intron 15.0%
!!! AACAAAATTTATTTTGAACT+TGG + chr8_4:38527551-38527570 Msa1325830:intron 15.0%
!! AAATATAGTTAGAATCTAAA+GGG - chr8_4:38528494-38528513 None:intergenic 15.0%
!! AAAATATAGTTAGAATCTAA+AGG - chr8_4:38528495-38528514 None:intergenic 15.0%
!! CAAGAAATAAAACAAAATAT+AGG - chr8_4:38528595-38528614 None:intergenic 15.0%
!! TTGTGTAAAAAAAACAATAC+AGG + chr8_4:38526188-38526207 Msa1325830:intron 20.0%
!!! TTAATTTTGAAGTTGTCATT+TGG + chr8_4:38526706-38526725 Msa1325830:intron 20.0%
!! AATTGCAATCTTTAATAGTA+CGG - chr8_4:38526807-38526826 None:intergenic 20.0%
!!! ATACATACTATTGTTTTACA+GGG + chr8_4:38527024-38527043 Msa1325830:intron 20.0%
!! GTATCTATCATTACTTTAAT+AGG + chr8_4:38527959-38527978 Msa1325830:intron 20.0%
!! AATAGACAGGAAATAAATTA+GGG - chr8_4:38528380-38528399 None:intergenic 20.0%
!! TAATAGACAGGAAATAAATT+AGG - chr8_4:38528381-38528400 None:intergenic 20.0%
!!! AAATTAACTTTTCTGTGTTT+TGG + chr8_4:38528430-38528449 Msa1325830:intron 20.0%
!!! AATTAACTTTTCTGTGTTTT+GGG + chr8_4:38528431-38528450 Msa1325830:intron 20.0%
!!! CAAAATGATTCCATTTTATT+TGG + chr8_4:38529191-38529210 Msa1325830:CDS 20.0%
!!! ATTCCATTTTATTTGGAAAT+GGG + chr8_4:38529198-38529217 Msa1325830:CDS 20.0%
!! GAAAATAAGTGACATAAATA+TGG - chr8_4:38529560-38529579 None:intergenic 20.0%
!!! TTGATTTAATTTGTTCAACA+AGG + chr8_4:38529675-38529694 Msa1325830:intron 20.0%
!! TGTAGTAGTATTTATGTATT+TGG - chr8_4:38529714-38529733 None:intergenic 20.0%
!! AATTATTGAATATACTTACG+TGG - chr8_4:38529901-38529920 None:intergenic 20.0%
!!! ATAAACTAGCAATTTTTTAG+AGG - chr8_4:38530456-38530475 None:intergenic 20.0%
!!! AAAAATTGCTAGTTTATAGA+AGG + chr8_4:38530459-38530478 Msa1325830:three_prime_UTR 20.0%
! TGTAAAAAAAACAATACAGG+AGG + chr8_4:38526191-38526210 Msa1325830:intron 25.0%
!!! ACTTTTGAAGATAACCAAAA+CGG + chr8_4:38526290-38526309 Msa1325830:CDS 25.0%
!! ACATCACTGTTCTAAATAAA+CGG + chr8_4:38526737-38526756 Msa1325830:intron 25.0%
! CAAAGTTGCAATAACATTTA+CGG - chr8_4:38526839-38526858 None:intergenic 25.0%
!! GGTATGTATCATTTTATACA+AGG - chr8_4:38526870-38526889 None:intergenic 25.0%
!!! GATACATACTATTGTTTTAC+AGG + chr8_4:38527023-38527042 Msa1325830:intron 25.0%
! TTAGTAATGTTTATACATGC+AGG + chr8_4:38527071-38527090 Msa1325830:intron 25.0%
!! GAATTTCAATTTGAAACGAA+AGG - chr8_4:38527935-38527954 None:intergenic 25.0%
! CGTTTCAAATTGAAATTCAT+TGG + chr8_4:38527937-38527956 Msa1325830:intron 25.0%
! TTTAGGAAGCTTATTTGATT+TGG + chr8_4:38528121-38528140 Msa1325830:CDS 25.0%
! ACATCATAAATAAGACAGAA+GGG - chr8_4:38528209-38528228 None:intergenic 25.0%
! AACATCATAAATAAGACAGA+AGG - chr8_4:38528210-38528229 None:intergenic 25.0%
!!! AATATTTTTTCCTCATGTCT+TGG + chr8_4:38528256-38528275 Msa1325830:intron 25.0%
! AGATATTAAGAGAAGAAGAA+AGG + chr8_4:38528335-38528354 Msa1325830:intron 25.0%
! GAAATAAATTAGGGTTCAAA+TGG - chr8_4:38528371-38528390 None:intergenic 25.0%
! TATTCAATTGCATAATAGAC+AGG - chr8_4:38528393-38528412 None:intergenic 25.0%
! AACACAGAAAAGTTAATTTC+TGG - chr8_4:38528429-38528448 None:intergenic 25.0%
! CAATTCAAGAAAAAATGAAG+AGG - chr8_4:38528889-38528908 None:intergenic 25.0%
!!! GATTCCATTTTATTTGGAAA+TGG + chr8_4:38529197-38529216 Msa1325830:CDS 25.0%
!!! TTCCATTTTATTTGGAAATG+GGG + chr8_4:38529199-38529218 Msa1325830:CDS 25.0%
!!! TTATTTATTTTCTGCGATCT+TGG + chr8_4:38529374-38529393 Msa1325830:intron 25.0%
!!! TTTAATTTGTTCAACAAGGT+TGG + chr8_4:38529679-38529698 Msa1325830:intron 25.0%
! ATAAATACTACTACATATGC+CGG + chr8_4:38529752-38529771 Msa1325830:intron 25.0%
! AATGAAGAAACATGAAATAC+CGG - chr8_4:38529774-38529793 None:intergenic 25.0%
! AGCACTATCATTATCATTAA+GGG - chr8_4:38529819-38529838 None:intergenic 25.0%
! AAGCACTATCATTATCATTA+AGG - chr8_4:38529820-38529839 None:intergenic 25.0%
! ATGACATACAGTATTTAATG+TGG + chr8_4:38529874-38529893 Msa1325830:intron 25.0%
! ATCTAGTAACTCTAATCAAA+GGG - chr8_4:38530146-38530165 None:intergenic 25.0%
! GTATAATACCAAATTACAGA+GGG - chr8_4:38530264-38530283 None:intergenic 25.0%
! AATTTGTAGCTAAAGCTAAA+AGG - chr8_4:38530494-38530513 None:intergenic 25.0%
!! ACGTTTAAGTTACTTTCAAA+AGG + chr8_4:38530514-38530533 Msa1325830:three_prime_UTR 25.0%
! TTACTTTCAAAAGGAAATGT+TGG + chr8_4:38530523-38530542 Msa1325830:three_prime_UTR 25.0%
!!! AACCTTTGAGTTTTAACAAT+AGG + chr8_4:38530570-38530589 Msa1325830:three_prime_UTR 25.0%
! TACCTATTGTTAAAACTCAA+AGG - chr8_4:38530575-38530594 None:intergenic 25.0%
!!! AAGTATGTTTTAGTATGAAG+TGG + chr8_4:38530595-38530614 Msa1325830:three_prime_UTR 25.0%
! GAAGCATTTGAAGAATAAGA+GGG - chr8_4:38526000-38526019 None:intergenic 30.0%
! TGAAGCATTTGAAGAATAAG+AGG - chr8_4:38526001-38526020 None:intergenic 30.0%
AGAGAATGAATGAATTTACC+TGG - chr8_4:38526057-38526076 None:intergenic 30.0%
AGTGCTTCACAAATTCTTAT+TGG + chr8_4:38526113-38526132 Msa1325830:intron 30.0%
!! TATTCAGCTTTGAGTACAAT+TGG - chr8_4:38526330-38526349 None:intergenic 30.0%
!! TGAGATCTGATTGTTTTGTA+TGG + chr8_4:38526467-38526486 Msa1325830:intron 30.0%
!! ATCTGATTGTTTTGTATGGT+AGG + chr8_4:38526471-38526490 Msa1325830:intron 30.0%
CTTGAGACGATTATCAAATT+TGG - chr8_4:38526680-38526699 None:intergenic 30.0%
! CAAATTTGATAATCGTCTCA+AGG + chr8_4:38526678-38526697 Msa1325830:CDS 30.0%
! CATCACTGTTCTAAATAAAC+GGG + chr8_4:38526738-38526757 Msa1325830:intron 30.0%
TGATACATACCAAAAACACT+TGG + chr8_4:38526879-38526898 Msa1325830:intron 30.0%
GATACATACCAAAAACACTT+GGG + chr8_4:38526880-38526899 Msa1325830:intron 30.0%
! TGTTTTACAGGGTTCAATAA+TGG + chr8_4:38527035-38527054 Msa1325830:intron 30.0%
GAAAAGTTCAAGTCCTATAT+TGG + chr8_4:38527291-38527310 Msa1325830:CDS 30.0%
!!! TTCAAGTCCTATATTGGTTT+TGG + chr8_4:38527297-38527316 Msa1325830:CDS 30.0%
! TGGATTGGATTCAAAAATTG+AGG + chr8_4:38527431-38527450 Msa1325830:CDS 30.0%
! TAACTGTTTTACTCTGCAAA+TGG + chr8_4:38527614-38527633 Msa1325830:intron 30.0%
!! TTGTTTGTTTTCCATGAAGA+TGG + chr8_4:38528642-38528661 Msa1325830:intron 30.0%
!! TGTTTGTTTTCCATGAAGAT+GGG + chr8_4:38528643-38528662 Msa1325830:intron 30.0%
ACATAAATATGGACACAGAA+AGG - chr8_4:38529549-38529568 None:intergenic 30.0%
!! ATAAATAACTTTGAGGCTTC+CGG - chr8_4:38529630-38529649 None:intergenic 30.0%
ACTATCATTATCATTAAGGG+AGG - chr8_4:38529816-38529835 None:intergenic 30.0%
! TGATAGTGCTTTCTTTCATT+TGG + chr8_4:38529829-38529848 Msa1325830:intron 30.0%
! TTCATTTTGTAGCACATCTA+TGG - chr8_4:38530053-38530072 None:intergenic 30.0%
GATCTAGTAACTCTAATCAA+AGG - chr8_4:38530147-38530166 None:intergenic 30.0%
GGTATAATACCAAATTACAG+AGG - chr8_4:38530265-38530284 None:intergenic 30.0%
AGAGAAAAGAAGAGAAGAGA+GGG - chr8_4:38525697-38525716 None:intergenic 35.0%
AAGAGAAAAGAAGAGAAGAG+AGG - chr8_4:38525698-38525717 None:intergenic 35.0%
TGAATGAATTTACCTGGAAG+CGG - chr8_4:38526051-38526070 None:intergenic 35.0%
!! GGTTATCTTCAAAAGTGCTT+CGG - chr8_4:38526286-38526305 None:intergenic 35.0%
GTGTCAATAATGGTGAGATT+TGG - chr8_4:38526363-38526382 None:intergenic 35.0%
ATGATAAGTGATTCGACTGA+TGG + chr8_4:38526422-38526441 Msa1325830:intron 35.0%
CGACTGATGGTATGTTTAAT+TGG + chr8_4:38526435-38526454 Msa1325830:intron 35.0%
AAATTGATCCCACGTTTAGA+CGG + chr8_4:38526638-38526657 Msa1325830:CDS 35.0%
ACATGCAGGAATTTACTGAT+AGG + chr8_4:38527085-38527104 Msa1325830:intron 35.0%
CAGATGAGAAATATCTGAAG+TGG - chr8_4:38527457-38527476 None:intergenic 35.0%
CTTCAGATATTTCTCATCTG+AGG + chr8_4:38527457-38527476 Msa1325830:CDS 35.0%
AATATATTACTTGCCCATGC+TGG + chr8_4:38527987-38528006 Msa1325830:CDS 35.0%
TTCCTAAAACAAAAGCAAGG+CGG - chr8_4:38528109-38528128 None:intergenic 35.0%
AGCTTCCTAAAACAAAAGCA+AGG - chr8_4:38528112-38528131 None:intergenic 35.0%
GCTCTATCAGTATCTTACAT+GGG - chr8_4:38528544-38528563 None:intergenic 35.0%
AGCTCTATCAGTATCTTACA+TGG - chr8_4:38528545-38528564 None:intergenic 35.0%
AAGATACTGATAGAGCTGAA+TGG + chr8_4:38528548-38528567 Msa1325830:intron 35.0%
CCATGAAGATGGGATAAAAA+CGG + chr8_4:38528653-38528672 Msa1325830:intron 35.0%
CATGAAGATGGGATAAAAAC+GGG + chr8_4:38528654-38528673 Msa1325830:intron 35.0%
ATAAAAACGGGAAACATGGA+TGG + chr8_4:38528666-38528685 Msa1325830:CDS 35.0%
!!! TAGGTTTTCATGCTGCTTTA+AGG + chr8_4:38528694-38528713 Msa1325830:CDS 35.0%
AAGTTTCAACAAATTTCCCC+AGG + chr8_4:38528857-38528876 Msa1325830:CDS 35.0%
ATTCTGCTTCTCATGATGTA+AGG + chr8_4:38528919-38528938 Msa1325830:CDS 35.0%
CTTGGAATATGCAATGACAT+GGG + chr8_4:38529107-38529126 Msa1325830:CDS 35.0%
TTGGAATATGCAATGACATG+GGG + chr8_4:38529108-38529127 Msa1325830:CDS 35.0%
CTCCCCATTTCCAAATAAAA+TGG - chr8_4:38529204-38529223 None:intergenic 35.0%
GTTACATCGACATTAAACTC+TGG + chr8_4:38529308-38529327 Msa1325830:CDS 35.0%
AAATTTCCAGTTCCAGCTTT+AGG + chr8_4:38529425-38529444 Msa1325830:intron 35.0%
AATTTCCAGTTCCAGCTTTA+GGG + chr8_4:38529426-38529445 Msa1325830:intron 35.0%
TAAATTGCAACTGAAGGTGA+TGG - chr8_4:38529606-38529625 None:intergenic 35.0%
ACCTTCAGTTGCAATTTAAC+CGG + chr8_4:38529608-38529627 Msa1325830:intron 35.0%
TGTGAACGATGAGAAATTCA+TGG + chr8_4:38530006-38530025 Msa1325830:CDS 35.0%
TGAACTCATTCAAGCAAGAA+TGG - chr8_4:38530108-38530127 None:intergenic 35.0%
ATGAGTTCAAAAACGTTGCT+CGG + chr8_4:38530119-38530138 Msa1325830:CDS 35.0%
TTAGAGTTACTAGATCTCCA+AGG + chr8_4:38530151-38530170 Msa1325830:three_prime_UTR 35.0%
ATCAAAGCATAGCAAAACCA+TGG - chr8_4:38530179-38530198 None:intergenic 35.0%
CAGTGTTGCATTCTTTAGAT+GGG - chr8_4:38530286-38530305 None:intergenic 35.0%
AGCTAGATTTACTCAGTAGT+CGG + chr8_4:38530346-38530365 Msa1325830:three_prime_UTR 35.0%
! AGTCGGTAATCTGAAATTAG+AGG + chr8_4:38530363-38530382 Msa1325830:three_prime_UTR 35.0%
CATGACATCTATCGATCATA+AGG - chr8_4:38530549-38530568 None:intergenic 35.0%
GAGAAAAGAAGAGAAGAGAG+GGG - chr8_4:38525696-38525715 None:intergenic 40.0%
TGGTGTCTGTTTGGTAAGTA+AGG - chr8_4:38525730-38525749 None:intergenic 40.0%
! TTCGAAGCGAGATTTGGAAT+CGG - chr8_4:38525816-38525835 None:intergenic 40.0%
AATGTCCGTGAAGTTGAGAT+GGG + chr8_4:38525965-38525984 Msa1325830:CDS 40.0%
GCATTTGAAGAATAAGAGGG+CGG - chr8_4:38525997-38526016 None:intergenic 40.0%
!! GAATTTGTGAAGCACTGACA+CGG - chr8_4:38526109-38526128 None:intergenic 40.0%
GAGGAAGATTCAGAAGAGTA+TGG + chr8_4:38526210-38526229 Msa1325830:CDS 40.0%
! TTCAGAAGAGTATGGAAGTC+CGG + chr8_4:38526218-38526237 Msa1325830:CDS 40.0%
! GCTTTGAGTACAATTGGCTT+AGG - chr8_4:38526324-38526343 None:intergenic 40.0%
TCTCACCATTATTGACACAC+CGG + chr8_4:38526365-38526384 Msa1325830:CDS 40.0%
AATACCTTGAGAACAAACCC+CGG - chr8_4:38526387-38526406 None:intergenic 40.0%
! TTTTGTATGGTAGGCGAAGA+AGG + chr8_4:38526480-38526499 Msa1325830:intron 40.0%
TTTGTATGGTAGGCGAAGAA+GGG + chr8_4:38526481-38526500 Msa1325830:intron 40.0%
ACCATGGAAAGAATCTCATC+AGG - chr8_4:38526523-38526542 None:intergenic 40.0%
TCTTTCCATGGTGAAGACAT+TGG + chr8_4:38526531-38526550 Msa1325830:CDS 40.0%
! GCTGAAGGAACAAGAGTATA+CGG - chr8_4:38526570-38526589 None:intergenic 40.0%
ATTCCACACTACTTTGCTGA+AGG - chr8_4:38526585-38526604 None:intergenic 40.0%
TTCAGCAAAGTAGTGTGGAA+TGG + chr8_4:38526584-38526603 Msa1325830:CDS 40.0%
AATAGAGTCCAACCACAAAG+AGG - chr8_4:38526614-38526633 None:intergenic 40.0%
ATGATTGTCCGTCTAAACGT+GGG - chr8_4:38526649-38526668 None:intergenic 40.0%
AATGATTGTCCGTCTAAACG+TGG - chr8_4:38526650-38526669 None:intergenic 40.0%
TCACTAACTATAGCCTCACT+TGG + chr8_4:38526771-38526790 Msa1325830:intron 40.0%
CATACCAAAAACACTTGGGT+TGG + chr8_4:38526884-38526903 Msa1325830:intron 40.0%
ATCAAACTTGAGACCTTGAG+AGG - chr8_4:38526945-38526964 None:intergenic 40.0%
GTCTCAAGTTTGATTCTCTC+CGG + chr8_4:38526951-38526970 Msa1325830:intron 40.0%
TGCAGGAATTTACTGATAGG+TGG + chr8_4:38527088-38527107 Msa1325830:intron 40.0%
GCAGGAATTTACTGATAGGT+GGG + chr8_4:38527089-38527108 Msa1325830:intron 40.0%
ATTTACTGATAGGTGGGAAG+TGG + chr8_4:38527095-38527114 Msa1325830:CDS 40.0%
TTTCAAATGAAGAGTTCCGC+AGG + chr8_4:38527199-38527218 Msa1325830:CDS 40.0%
ACTCCAAATAATCCCTCAGA+CGG - chr8_4:38527323-38527342 None:intergenic 40.0%
AACTATGATTACCCACCACA+TGG - chr8_4:38527518-38527537 None:intergenic 40.0%
TGCAAATGGATGTTCCAACA+GGG + chr8_4:38527628-38527647 Msa1325830:intron 40.0%
TAAAGACGAAGACTGGCATT+GGG - chr8_4:38527772-38527791 None:intergenic 40.0%
ATAAAGACGAAGACTGGCAT+TGG - chr8_4:38527773-38527792 None:intergenic 40.0%
AATGCCAGTCTTCGTCTTTA+TGG + chr8_4:38527772-38527791 Msa1325830:CDS 40.0%
ATGCAGCACAACGAAATTCA+TGG - chr8_4:38527822-38527841 None:intergenic 40.0%
TCACATGCAGTATCAAGAAG+AGG - chr8_4:38528086-38528105 None:intergenic 40.0%
TACATGCTGAATCATGCCTA+CGG - chr8_4:38528160-38528179 None:intergenic 40.0%
CTATCGTTATCCAAGACATG+AGG - chr8_4:38528269-38528288 None:intergenic 40.0%
TTTCTCAAACCCCATTGAGA+GGG - chr8_4:38528301-38528320 None:intergenic 40.0%
ATTTCTCAAACCCCATTGAG+AGG - chr8_4:38528302-38528321 None:intergenic 40.0%
CAATGGGGTTTGAGAAATGT+AGG + chr8_4:38528304-38528323 Msa1325830:intron 40.0%
!! CCGTTTTTATCCCATCTTCA+TGG - chr8_4:38528656-38528675 None:intergenic 40.0%
TGGGATAAAAACGGGAAACA+TGG + chr8_4:38528662-38528681 Msa1325830:CDS 40.0%
!! CTTTAAGGTGTGCTTACACT+CGG + chr8_4:38528709-38528728 Msa1325830:CDS 40.0%
TGCTTACACTCGGTTCTTAA+AGG + chr8_4:38528719-38528738 Msa1325830:CDS 40.0%
!! ATGGACTGGTAACTGAATCA+AGG - chr8_4:38528782-38528801 None:intergenic 40.0%
AATGACTTTCAACCATGTGC+CGG + chr8_4:38528822-38528841 Msa1325830:CDS 40.0%
! GAAACTTGAAGCGTTTATGC+CGG - chr8_4:38528844-38528863 None:intergenic 40.0%
TGCTTCTCATGATGTAAGGA+GGG + chr8_4:38528923-38528942 Msa1325830:CDS 40.0%
TTTCTATGCCCTCCATATAC+AGG - chr8_4:38529083-38529102 None:intergenic 40.0%
! TGTATATGGAGGGCATAGAA+AGG + chr8_4:38529082-38529101 Msa1325830:CDS 40.0%
GCTTGGAATATGCAATGACA+TGG + chr8_4:38529106-38529125 Msa1325830:CDS 40.0%
ATTCTAGACGCTCTCTTTCT+TGG - chr8_4:38529134-38529153 None:intergenic 40.0%
CGTGAAGTTCTTGTTGAAAG+AGG + chr8_4:38529284-38529303 Msa1325830:CDS 40.0%
CACAAGATAGAAGCTTACCA+AGG - chr8_4:38529344-38529363 None:intergenic 40.0%
! ATTTCCAGTTCCAGCTTTAG+GGG + chr8_4:38529427-38529446 Msa1325830:intron 40.0%
TCCGGTTAAATTGCAACTGA+AGG - chr8_4:38529612-38529631 None:intergenic 40.0%
GATACTTCTCTTCAAGCTAC+TGG + chr8_4:38529851-38529870 Msa1325830:intron 40.0%
AGCACAACAAGGTGGTATTA+TGG - chr8_4:38529933-38529952 None:intergenic 40.0%
CGCAATTCAGGTCAACAAAT+TGG + chr8_4:38530226-38530245 Msa1325830:three_prime_UTR 40.0%
CCAGTGTTGCATTCTTTAGA+TGG - chr8_4:38530287-38530306 None:intergenic 40.0%
CCATCTAAAGAATGCAACAC+TGG + chr8_4:38530284-38530303 Msa1325830:three_prime_UTR 40.0%
ATTCAGCAGGTAAGTGAATG+TGG - chr8_4:38530413-38530432 None:intergenic 40.0%
AGAAGAGAAGAGAGGGGAAA+AGG - chr8_4:38525690-38525709 None:intergenic 45.0%
! ATGACATGGTGGTGTCTGTT+TGG - chr8_4:38525739-38525758 None:intergenic 45.0%
! AATCGGAGTGCTTTCTTGAC+CGG - chr8_4:38525799-38525818 None:intergenic 45.0%
GTAAGCTTCGAAGCGAGATT+TGG - chr8_4:38525822-38525841 None:intergenic 45.0%
ACGGCAACAATTTCAGGGAT+GGG - chr8_4:38525887-38525906 None:intergenic 45.0%
AACGGCAACAATTTCAGGGA+TGG - chr8_4:38525888-38525907 None:intergenic 45.0%
ATCCCTGAAATTGTTGCCGT+TGG + chr8_4:38525887-38525906 Msa1325830:CDS 45.0%
CACCAACGGCAACAATTTCA+GGG - chr8_4:38525892-38525911 None:intergenic 45.0%
CAATGTCCGTGAAGTTGAGA+TGG + chr8_4:38525964-38525983 Msa1325830:CDS 45.0%
GAGTACCCATCTCAACTTCA+CGG - chr8_4:38525973-38525992 None:intergenic 45.0%
! CTAACAGGTTGACACGATGT+TGG - chr8_4:38526083-38526102 None:intergenic 45.0%
!! CTTAGGAGAAACTGCCGTTT+TGG - chr8_4:38526307-38526326 None:intergenic 45.0%
CTCACCATTATTGACACACC+GGG + chr8_4:38526366-38526385 Msa1325830:CDS 45.0%
TCACCATTATTGACACACCG+GGG + chr8_4:38526367-38526386 Msa1325830:CDS 45.0%
AAACCCCGGTGTGTCAATAA+TGG - chr8_4:38526373-38526392 None:intergenic 45.0%
GCCTGATGAGATTCTTTCCA+TGG + chr8_4:38526519-38526538 Msa1325830:CDS 45.0%
AGTAGCCAATGTCTTCACCA+TGG - chr8_4:38526539-38526558 None:intergenic 45.0%
! AACAAGAGTATACGGTGTGG+AGG - chr8_4:38526562-38526581 None:intergenic 45.0%
! AGGAACAAGAGTATACGGTG+TGG - chr8_4:38526565-38526584 None:intergenic 45.0%
GTTCCTTCAGCAAAGTAGTG+TGG + chr8_4:38526579-38526598 Msa1325830:CDS 45.0%
! CACACCAACCCAAGTGTTTT+TGG - chr8_4:38526891-38526910 None:intergenic 45.0%
!! CAAAAACACTTGGGTTGGTG+TGG + chr8_4:38526889-38526908 Msa1325830:intron 45.0%
CTAAACTAGCCCACCTAAAC+TGG - chr8_4:38526979-38526998 None:intergenic 45.0%
GATCGCTATTTGAGTGCAAG+TGG + chr8_4:38527117-38527136 Msa1325830:CDS 45.0%
TTGAGTGCAAGTGGTTACCT+TGG + chr8_4:38527126-38527145 Msa1325830:CDS 45.0%
!!! CAACACTCGCCCTTTTTTTG+TGG + chr8_4:38527152-38527171 Msa1325830:CDS 45.0%
TAGGCAGGGCCACAAAAAAA+GGG - chr8_4:38527164-38527183 None:intergenic 45.0%
TTAGGCAGGGCCACAAAAAA+AGG - chr8_4:38527165-38527184 None:intergenic 45.0%
!!! TTTTTTTGTGGCCCTGCCTA+AGG + chr8_4:38527164-38527183 Msa1325830:CDS 45.0%
GAAATGTTGCCCCTATCCTT+AGG - chr8_4:38527183-38527202 None:intergenic 45.0%
CAGACGGCCAAAACCAATAT+AGG - chr8_4:38527307-38527326 None:intergenic 45.0%
!!! ATATTGGTTTTGGCCGTCTG+AGG + chr8_4:38527307-38527326 Msa1325830:CDS 45.0%
!!! TATTGGTTTTGGCCGTCTGA+GGG + chr8_4:38527308-38527327 Msa1325830:CDS 45.0%
TCAAGCAAGGCAAGAGTTGA+TGG - chr8_4:38527378-38527397 None:intergenic 45.0%
ACTACACCTTTGCTCAAGCA+AGG - chr8_4:38527391-38527410 None:intergenic 45.0%
!! CACTTGTGAACTTGCTGGAT+TGG + chr8_4:38527416-38527435 Msa1325830:CDS 45.0%
AGCTTCTATCAGCAACCATG+TGG + chr8_4:38527500-38527519 Msa1325830:CDS 45.0%
TTCTATCAGCAACCATGTGG+TGG + chr8_4:38527503-38527522 Msa1325830:intron 45.0%
TCTATCAGCAACCATGTGGT+GGG + chr8_4:38527504-38527523 Msa1325830:intron 45.0%
CTGCAAATGGATGTTCCAAC+AGG + chr8_4:38527627-38527646 Msa1325830:intron 45.0%
ATCTGCTGCACCATCAATCA+AGG - chr8_4:38527656-38527675 None:intergenic 45.0%
!!! TGTTGTTTTTCCCCACTGCT+CGG - chr8_4:38527686-38527705 None:intergenic 45.0%
! CTCAAAGTGGCATTGGGATT+TGG + chr8_4:38527719-38527738 Msa1325830:CDS 45.0%
CCAGTCTTCGTCTTTATGGA+GGG + chr8_4:38527776-38527795 Msa1325830:CDS 45.0%
CAGTCTTCGTCTTTATGGAG+GGG + chr8_4:38527777-38527796 Msa1325830:CDS 45.0%
!!! GACCGCCTTGCTTTTGTTTT+AGG + chr8_4:38528104-38528123 Msa1325830:CDS 45.0%
!! TGGCTCTAGAAAGAAACCGT+AGG + chr8_4:38528141-38528160 Msa1325830:CDS 45.0%
ATGTGAAGCTTCTTCCTTGC+TGG + chr8_4:38528179-38528198 Msa1325830:intron 45.0%
TTCTCAAACCCCATTGAGAG+GGG - chr8_4:38528300-38528319 None:intergenic 45.0%
GGAAACATGGATGGCTATGT+AGG + chr8_4:38528675-38528694 Msa1325830:CDS 45.0%
GACTGGTAACTGAATCAAGG+TGG - chr8_4:38528779-38528798 None:intergenic 45.0%
AGTTACCAGTCCATACTCAC+AGG + chr8_4:38528788-38528807 Msa1325830:CDS 45.0%
AAGTAGCAGACCTGTGAGTA+TGG - chr8_4:38528801-38528820 None:intergenic 45.0%
AAATGAAGAGGCTGAAGCCT+GGG - chr8_4:38528877-38528896 None:intergenic 45.0%
AAAATGAAGAGGCTGAAGCC+TGG - chr8_4:38528878-38528897 None:intergenic 45.0%
CTGCTTCTCATGATGTAAGG+AGG + chr8_4:38528922-38528941 Msa1325830:CDS 45.0%
ACCTCCAGAAAAGAATGCAC+TGG + chr8_4:38528959-38528978 Msa1325830:CDS 45.0%
! TCCAGTGCATTCTTTTCTGG+AGG - chr8_4:38528963-38528982 None:intergenic 45.0%
TCCAGAAAAGAATGCACTGG+AGG + chr8_4:38528962-38528981 Msa1325830:CDS 45.0%
! TCCTCCAGTGCATTCTTTTC+TGG - chr8_4:38528966-38528985 None:intergenic 45.0%
CAGGTGATCCTGTATATGGA+GGG + chr8_4:38529072-38529091 Msa1325830:CDS 45.0%
!! AAGAGAGCGTCTAGAATGAC+AGG + chr8_4:38529137-38529156 Msa1325830:CDS 45.0%
! GCGTCTAGAATGACAGGAAA+TGG + chr8_4:38529143-38529162 Msa1325830:CDS 45.0%
TTTGGAAATGGGGAGAGAAC+AGG + chr8_4:38529209-38529228 Msa1325830:CDS 45.0%
ACGTATACGTGCGAAATGCT+GGG - chr8_4:38529267-38529286 None:intergenic 45.0%
TAGAAGCTTACCAAGGAGTC+AGG - chr8_4:38529337-38529356 None:intergenic 45.0%
CGATCTTGGATGCTTGAATG+TGG + chr8_4:38529388-38529407 Msa1325830:intron 45.0%
TTGGATGCTTGAATGTGGCA+AGG + chr8_4:38529393-38529412 Msa1325830:intron 45.0%
CACAAACAAGCACAACAAGG+TGG - chr8_4:38529941-38529960 None:intergenic 45.0%
CTGCACAAACAAGCACAACA+AGG - chr8_4:38529944-38529963 None:intergenic 45.0%
ATAGCAAAACCATGGCTCCT+TGG - chr8_4:38530171-38530190 None:intergenic 45.0%
GTGAACCTATGACGCAATTC+AGG + chr8_4:38530214-38530233 Msa1325830:three_prime_UTR 45.0%
GTTGACCTGAATTGCGTCAT+AGG - chr8_4:38530222-38530241 None:intergenic 45.0%
TGACGAGACCCTCTGTAATT+TGG + chr8_4:38530253-38530272 Msa1325830:three_prime_UTR 45.0%
TTACACATGCTTCAACACGC+AGG - chr8_4:38530325-38530344 None:intergenic 45.0%
TCTGATCATCAGCATTCAGC+AGG - chr8_4:38530426-38530445 None:intergenic 45.0%
!!! ATTTAATTTAATTTATTTTC+TGG + chr8_4:38529652-38529671 Msa1325830:intron 5.0%
AGAAGAGAGGGGAAAAGGAG+GGG - chr8_4:38525685-38525704 None:intergenic 50.0%
GAGAAGAGAGGGGAAAAGGA+GGG - chr8_4:38525686-38525705 None:intergenic 50.0%
AGAGAAGAGAGGGGAAAAGG+AGG - chr8_4:38525687-38525706 None:intergenic 50.0%
GATGTGGATGGGGTCTTTGT+GGG - chr8_4:38525773-38525792 None:intergenic 50.0%
! ATCGGAGTGCTTTCTTGACC+GGG - chr8_4:38525798-38525817 None:intergenic 50.0%
CGGCAACAATTTCAGGGATG+GGG - chr8_4:38525886-38525905 None:intergenic 50.0%
CCACCAACGGCAACAATTTC+AGG - chr8_4:38525893-38525912 None:intergenic 50.0%
CCTGAAATTGTTGCCGTTGG+TGG + chr8_4:38525890-38525909 Msa1325830:CDS 50.0%
! TCCATCAGATTGGCCACCAA+CGG - chr8_4:38525906-38525925 None:intergenic 50.0%
GGGAGCTCTTTCCATCAGAT+TGG - chr8_4:38525916-38525935 None:intergenic 50.0%
GGACATTGAAGCGAAAACCG+AGG - chr8_4:38525952-38525971 None:intergenic 50.0%
! AGAAGAGTATGGAAGTCCGG+TGG + chr8_4:38526221-38526240 Msa1325830:CDS 50.0%
GTATGGAAGTCCGGTGGTTT+CGG + chr8_4:38526227-38526246 Msa1325830:CDS 50.0%
ATCGTAGATGCCGAAACCAC+CGG - chr8_4:38526240-38526259 None:intergenic 50.0%
ATCTCATCAGGCGTGTTCTC+CGG - chr8_4:38526511-38526530 None:intergenic 50.0%
TGGAATGGTGCTCCTCTTTG+TGG + chr8_4:38526599-38526618 Msa1325830:CDS 50.0%
ATGGTGCTCCTCTTTGTGGT+TGG + chr8_4:38526603-38526622 Msa1325830:CDS 50.0%
!! TTGGGTTGGTGTGGTTGTGT+TGG + chr8_4:38526898-38526917 Msa1325830:intron 50.0%
!! TTGGTGTGGTTGTGTTGGCT+TGG + chr8_4:38526903-38526922 Msa1325830:intron 50.0%
!! TGGTGTGGTTGTGTTGGCTT+GGG + chr8_4:38526904-38526923 Msa1325830:intron 50.0%
! ATTCTCTCCGGTGCCAGTTT+AGG + chr8_4:38526963-38526982 Msa1325830:intron 50.0%
GCAGATCTCTCATGTGGACT+CGG + chr8_4:38527221-38527240 Msa1325830:CDS 50.0%
GTTATGCATCATCTCCGCGA+TGG + chr8_4:38527246-38527265 Msa1325830:CDS 50.0%
TGGCCGTCTGAGGGATTATT+TGG + chr8_4:38527317-38527336 Msa1325830:CDS 50.0%
CTCTTGCCTTGCTTGAGCAA+AGG + chr8_4:38527382-38527401 Msa1325830:CDS 50.0%
! GCTTGAGCAAAGGTGTAGTG+AGG + chr8_4:38527392-38527411 Msa1325830:CDS 50.0%
GAGGTCACTTGTGAACTTGC+TGG + chr8_4:38527411-38527430 Msa1325830:CDS 50.0%
! CATCAATCAAGGCACCCTGT+TGG - chr8_4:38527645-38527664 None:intergenic 50.0%
! CAACAGGGTGCCTTGATTGA+TGG + chr8_4:38527643-38527662 Msa1325830:intron 50.0%
!! TTGTTTTTCCCCACTGCTCG+GGG - chr8_4:38527684-38527703 None:intergenic 50.0%
!!! GTTGTTTTTCCCCACTGCTC+GGG - chr8_4:38527685-38527704 None:intergenic 50.0%
!! GTAGAAGAGCGCTCTCAAAG+TGG + chr8_4:38527706-38527725 Msa1325830:CDS 50.0%
AGCGCTCTCAAAGTGGCATT+GGG + chr8_4:38527713-38527732 Msa1325830:CDS 50.0%
GCCAGTCTTCGTCTTTATGG+AGG + chr8_4:38527775-38527794 Msa1325830:CDS 50.0%
CCCTCCATAAAGACGAAGAC+TGG - chr8_4:38527779-38527798 None:intergenic 50.0%
! TCACCTTTTCCCTCGAGACT+GGG - chr8_4:38527861-38527880 None:intergenic 50.0%
! ATCACCTTTTCCCTCGAGAC+TGG - chr8_4:38527862-38527881 None:intergenic 50.0%
AGTCTCATACCCCCTCTCAA+TGG + chr8_4:38528287-38528306 Msa1325830:intron 50.0%
GTCTCATACCCCCTCTCAAT+GGG + chr8_4:38528288-38528307 Msa1325830:intron 50.0%
TCTCATACCCCCTCTCAATG+GGG + chr8_4:38528289-38528308 Msa1325830:intron 50.0%
TCTCAAACCCCATTGAGAGG+GGG - chr8_4:38528299-38528318 None:intergenic 50.0%
! AGCAGTGCAAGCAGCTTGTT+AGG + chr8_4:38528751-38528770 Msa1325830:CDS 50.0%
AATGAAGAGGCTGAAGCCTG+GGG - chr8_4:38528876-38528895 None:intergenic 50.0%
CAGCCAGGTGATCCTGTATA+TGG + chr8_4:38529068-38529087 Msa1325830:CDS 50.0%
CCTCCATATACAGGATCACC+TGG - chr8_4:38529074-38529093 None:intergenic 50.0%
CCAGGTGATCCTGTATATGG+AGG + chr8_4:38529071-38529090 Msa1325830:CDS 50.0%
CACGTATACGTGCGAAATGC+TGG - chr8_4:38529268-38529287 None:intergenic 50.0%
ACTCTGGATTCCTGACTCCT+TGG + chr8_4:38529324-38529343 Msa1325830:CDS 50.0%
CAATATAGCGCCCCTAAAGC+TGG - chr8_4:38529440-38529459 None:intergenic 50.0%
ATGGACATGTTTGTCGCTCC+TGG + chr8_4:38530025-38530044 Msa1325830:CDS 50.0%
TGTAGCACATCTATGGCACC+AGG - chr8_4:38530046-38530065 None:intergenic 50.0%
ACTAGATCTCCAAGGAGCCA+TGG + chr8_4:38530159-38530178 Msa1325830:three_prime_UTR 50.0%
!! AGTGGTGGTGGATGACATGG+TGG - chr8_4:38525750-38525769 None:intergenic 55.0%
GGATGTGGATGGGGTCTTTG+TGG - chr8_4:38525774-38525793 None:intergenic 55.0%
TTGACCGGGTGGATGTGGAT+GGG - chr8_4:38525784-38525803 None:intergenic 55.0%
CTTTCTTGACCGGGTGGATG+TGG - chr8_4:38525789-38525808 None:intergenic 55.0%
! TCCCTTCTCGAAGCACTCCT+CGG + chr8_4:38525932-38525951 Msa1325830:CDS 55.0%
!! ACCGAGGAGTGCTTCGAGAA+GGG - chr8_4:38525936-38525955 None:intergenic 55.0%
!! AACCGAGGAGTGCTTCGAGA+AGG - chr8_4:38525937-38525956 None:intergenic 55.0%
CAGCGAGGTTCAAGAGCAGA+GGG - chr8_4:38526028-38526047 None:intergenic 55.0%
! GCACTGACACGGACACTAAC+AGG - chr8_4:38526098-38526117 None:intergenic 55.0%
! CACACCGGGGTTTGTTCTCA+AGG + chr8_4:38526380-38526399 Msa1325830:CDS 55.0%
GTAGGCGAAGAAGGGTGAAC+CGG + chr8_4:38526489-38526508 Msa1325830:intron 55.0%
CGGACAATCACAGCCAAGTG+AGG - chr8_4:38526787-38526806 None:intergenic 55.0%
!! GTTGTGTTGGCTTGGGACCT+TGG + chr8_4:38526911-38526930 Msa1325830:intron 55.0%
! CTTGAGAGGAGCACACTCCA+AGG - chr8_4:38526931-38526950 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG + chr8_4:38526929-38526948 Msa1325830:intron 55.0%
! TCTCCGGTGCCAGTTTAGGT+GGG + chr8_4:38526967-38526986 Msa1325830:intron 55.0%
TAGCCCACCTAAACTGGCAC+CGG - chr8_4:38526973-38526992 None:intergenic 55.0%
! AAGGGCGAGTGTTGTCTCCA+AGG - chr8_4:38527146-38527165 None:intergenic 55.0%
TTGTGGCCCTGCCTAAGGAT+AGG + chr8_4:38527169-38527188 Msa1325830:CDS 55.0%
TGTGGCCCTGCCTAAGGATA+GGG + chr8_4:38527170-38527189 Msa1325830:CDS 55.0%
GTTGCCCCTATCCTTAGGCA+GGG - chr8_4:38527178-38527197 None:intergenic 55.0%
TGTTGCCCCTATCCTTAGGC+AGG - chr8_4:38527179-38527198 None:intergenic 55.0%
CCACATGAGAGATCTGCCTG+CGG - chr8_4:38527218-38527237 None:intergenic 55.0%
GATCTCTCATGTGGACTCGG+AGG + chr8_4:38527224-38527243 Msa1325830:CDS 55.0%
! TCATCTCCGCGATGGTGTCA+AGG + chr8_4:38527254-38527273 Msa1325830:CDS 55.0%
! CATCTCCGCGATGGTGTCAA+GGG + chr8_4:38527255-38527274 Msa1325830:CDS 55.0%
AACCTCCCTTGACACCATCG+CGG - chr8_4:38527263-38527282 None:intergenic 55.0%
! TGTTTTTCCCCACTGCTCGG+GGG - chr8_4:38527683-38527702 None:intergenic 55.0%
GAGCGCTCTCAAAGTGGCAT+TGG + chr8_4:38527712-38527731 Msa1325830:CDS 55.0%
! AGTGGCATTGGGATTTGGCC+TGG + chr8_4:38527724-38527743 Msa1325830:CDS 55.0%
! TTCACATCGGTGATGACGCC+AGG - chr8_4:38527745-38527764 None:intergenic 55.0%
! GGCATTGGGAGGGTTCACAT+CGG - chr8_4:38527758-38527777 None:intergenic 55.0%
! GACGAAGACTGGCATTGGGA+GGG - chr8_4:38527768-38527787 None:intergenic 55.0%
! AGACGAAGACTGGCATTGGG+AGG - chr8_4:38527769-38527788 None:intergenic 55.0%
ATGGAGGGGCTGCATTTGAG+AGG + chr8_4:38527791-38527810 Msa1325830:CDS 55.0%
TGGAGGGGCTGCATTTGAGA+GGG + chr8_4:38527792-38527811 Msa1325830:CDS 55.0%
! ACCTTTTCCCTCGAGACTGG+GGG - chr8_4:38527859-38527878 None:intergenic 55.0%
! CACCTTTTCCCTCGAGACTG+GGG - chr8_4:38527860-38527879 None:intergenic 55.0%
TTAGTCCTCTTCCCCCACCA+CGG - chr8_4:38528013-38528032 None:intergenic 55.0%
TGGGGGAAGAGGACTAACAG+AGG + chr8_4:38528016-38528035 Msa1325830:CDS 55.0%
! CACGTGCTGCTGCTAGATCA+TGG + chr8_4:38528054-38528073 Msa1325830:CDS 55.0%
! GACAGAAGGGTATGCCAGCA+AGG - chr8_4:38528196-38528215 None:intergenic 55.0%
GCAGACCTGTGAGTATGGAC+TGG - chr8_4:38528796-38528815 None:intergenic 55.0%
! GAAGCGTTTATGCCGGCACA+TGG - chr8_4:38528837-38528856 None:intergenic 55.0%
GCACTGGAGGAAACAACACC+AGG + chr8_4:38528975-38528994 Msa1325830:CDS 55.0%
!! CGAACGTGTGCTGCTTTACC+TGG - chr8_4:38528996-38529015 None:intergenic 55.0%
GGGTCTCAGGGATAGTCATC+TGG - chr8_4:38529037-38529056 None:intergenic 55.0%
GATCAGGAGATGGGGTCTCA+GGG - chr8_4:38529049-38529068 None:intergenic 55.0%
TGATCAGGAGATGGGGTCTC+AGG - chr8_4:38529050-38529069 None:intergenic 55.0%
ACCTGGCTGATCAGGAGATG+GGG - chr8_4:38529057-38529076 None:intergenic 55.0%
CACCTGGCTGATCAGGAGAT+GGG - chr8_4:38529058-38529077 None:intergenic 55.0%
TCACCTGGCTGATCAGGAGA+TGG - chr8_4:38529059-38529078 None:intergenic 55.0%
ACAGGATCACCTGGCTGATC+AGG - chr8_4:38529065-38529084 None:intergenic 55.0%
! GGAGGGCATAGAAAGGAGCT+TGG + chr8_4:38529089-38529108 Msa1325830:CDS 55.0%
! GATCGCCTTGTTGTGGCTCT+CGG + chr8_4:38529968-38529987 Msa1325830:CDS 55.0%
! ATCGCCTTGTTGTGGCTCTC+GGG + chr8_4:38529969-38529988 Msa1325830:CDS 55.0%
!! GGGAGTGGTGGTGGATGACA+TGG - chr8_4:38525753-38525772 None:intergenic 60.0%
GGTCTTTGTGGGAGTGGTGG+TGG - chr8_4:38525762-38525781 None:intergenic 60.0%
TGGGGTCTTTGTGGGAGTGG+TGG - chr8_4:38525765-38525784 None:intergenic 60.0%
GGATGGGGTCTTTGTGGGAG+TGG - chr8_4:38525768-38525787 None:intergenic 60.0%
AGACCCCATCCACATCCACC+CGG + chr8_4:38525777-38525796 Msa1325830:CDS 60.0%
TGACCGGGTGGATGTGGATG+GGG - chr8_4:38525783-38525802 None:intergenic 60.0%
CTTGACCGGGTGGATGTGGA+TGG - chr8_4:38525785-38525804 None:intergenic 60.0%
! GGAGTGCTTTCTTGACCGGG+TGG - chr8_4:38525795-38525814 None:intergenic 60.0%
CAAAAGCGACAGCAGCGGCT+TGG - chr8_4:38525853-38525872 None:intergenic 60.0%
!!! CAAGCCGCTGCTGTCGCTTT+TGG + chr8_4:38525851-38525870 Msa1325830:CDS 60.0%
CTCGCCAAAAGCGACAGCAG+CGG - chr8_4:38525858-38525877 None:intergenic 60.0%
!! GCCGTTGGTGGCCAATCTGA+TGG + chr8_4:38525902-38525921 Msa1325830:CDS 60.0%
GCAGCGAGGTTCAAGAGCAG+AGG - chr8_4:38526029-38526048 None:intergenic 60.0%
TTTACCTGGAAGCGGCAGCG+AGG - chr8_4:38526043-38526062 None:intergenic 60.0%
! CTCTCCGGTGCCAGTTTAGG+TGG + chr8_4:38526966-38526985 Msa1325830:intron 60.0%
GTGGCCCTGCCTAAGGATAG+GGG + chr8_4:38527171-38527190 Msa1325830:CDS 60.0%
CCGCAGGCAGATCTCTCATG+TGG + chr8_4:38527215-38527234 Msa1325830:CDS 60.0%
AGATCCTTCCCCCGAGCAGT+GGG + chr8_4:38527672-38527691 Msa1325830:CDS 60.0%
!! CGAGACTGGGGGGCATTCAA+TGG - chr8_4:38527848-38527867 None:intergenic 60.0%
TTGAATGCCCCCCAGTCTCG+AGG + chr8_4:38527848-38527867 Msa1325830:CDS 60.0%
TGAATGCCCCCCAGTCTCGA+GGG + chr8_4:38527849-38527868 Msa1325830:CDS 60.0%
! CCTTTTCCCTCGAGACTGGG+GGG - chr8_4:38527858-38527877 None:intergenic 60.0%
TTACTTGCCCATGCTGGCCG+TGG + chr8_4:38527993-38528012 Msa1325830:CDS 60.0%
ACCCCATCTCCTGATCAGCC+AGG + chr8_4:38529053-38529072 Msa1325830:CDS 60.0%
AGCGCCCCTAAAGCTGGAAC+TGG - chr8_4:38529434-38529453 None:intergenic 60.0%
GAGCCACAACAAGGCGATCG+CGG - chr8_4:38529967-38529986 None:intergenic 60.0%
CCAACCCGAGAGCCACAACA+AGG - chr8_4:38529976-38529995 None:intergenic 60.0%
! CCTTGTTGTGGCTCTCGGGT+TGG + chr8_4:38529973-38529992 Msa1325830:CDS 60.0%
! AAGCGACAGCAGCGGCTTGG+AGG - chr8_4:38525850-38525869 None:intergenic 65.0%
! TGAACCTCGCTGCCGCTTCC+AGG + chr8_4:38526036-38526055 Msa1325830:CDS 65.0%
! CTCCGCGATGGTGTCAAGGG+AGG + chr8_4:38527258-38527277 Msa1325830:CDS 65.0%
CAGATCCTTCCCCCGAGCAG+TGG + chr8_4:38527671-38527690 Msa1325830:CDS 65.0%
GATCCTTCCCCCGAGCAGTG+GGG + chr8_4:38527673-38527692 Msa1325830:CDS 65.0%
TTTCCCCACTGCTCGGGGGA+AGG - chr8_4:38527679-38527698 None:intergenic 65.0%
CCCCCCAGTCTCGAGGGAAA+AGG + chr8_4:38527855-38527874 Msa1325830:CDS 65.0%
TTGCCCATGCTGGCCGTGGT+GGG + chr8_4:38527997-38528016 Msa1325830:CDS 65.0%
! CAGCCGCGATCGCCTTGTTG+TGG + chr8_4:38529961-38529980 Msa1325830:intron 65.0%
! CGACAGCAGCGGCTTGGAGG+CGG - chr8_4:38525847-38525866 None:intergenic 70.0%
CTTGCCCATGCTGGCCGTGG+TGG + chr8_4:38527996-38528015 Msa1325830:CDS 70.0%
TGCCCATGCTGGCCGTGGTG+GGG + chr8_4:38527998-38528017 Msa1325830:CDS 70.0%
TCCCCCACCACGGCCAGCAT+GGG - chr8_4:38528003-38528022 None:intergenic 70.0%
TTCCCCCACCACGGCCAGCA+TGG - chr8_4:38528004-38528023 None:intergenic 70.0%
GCCCATGCTGGCCGTGGTGG+GGG + chr8_4:38527999-38528018 Msa1325830:CDS 75.0%
! GCTGGCCGTGGTGGGGGAAG+AGG + chr8_4:38528005-38528024 Msa1325830:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 38525662 38530634 38525662 ID=Msa1325830;Name=Msa1325830
chr8_4 mRNA 38525662 38530634 38525662 ID=Msa1325830-mRNA-1;Parent=Msa1325830;Name=Msa1325830-mRNA-1;_AED=0.06;_eAED=0.06;_QI=90|1|1|1|1|1|8|484|809
chr8_4 exon 38525662 38526057 38525662 ID=Msa1325830-mRNA-1:exon:11703;Parent=Msa1325830-mRNA-1
chr8_4 exon 38526210 38526401 38526210 ID=Msa1325830-mRNA-1:exon:11704;Parent=Msa1325830-mRNA-1
chr8_4 exon 38526493 38526699 38526493 ID=Msa1325830-mRNA-1:exon:11705;Parent=Msa1325830-mRNA-1
chr8_4 exon 38527093 38527521 38527093 ID=Msa1325830-mRNA-1:exon:11706;Parent=Msa1325830-mRNA-1
chr8_4 exon 38527649 38527876 38527649 ID=Msa1325830-mRNA-1:exon:11707;Parent=Msa1325830-mRNA-1
chr8_4 exon 38527981 38528176 38527981 ID=Msa1325830-mRNA-1:exon:11708;Parent=Msa1325830-mRNA-1
chr8_4 exon 38528661 38529345 38528661 ID=Msa1325830-mRNA-1:exon:11709;Parent=Msa1325830-mRNA-1
chr8_4 exon 38529964 38530634 38529964 ID=Msa1325830-mRNA-1:exon:11710;Parent=Msa1325830-mRNA-1
chr8_4 five_prime_UTR 38525662 38525751 38525662 ID=Msa1325830-mRNA-1:five_prime_utr;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38525752 38526057 38525752 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38526210 38526401 38526210 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38526493 38526699 38526493 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38527093 38527521 38527093 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38527649 38527876 38527649 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38527981 38528176 38527981 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38528661 38529345 38528661 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 CDS 38529964 38530150 38529964 ID=Msa1325830-mRNA-1:cds;Parent=Msa1325830-mRNA-1
chr8_4 three_prime_UTR 38530151 38530634 38530151 ID=Msa1325830-mRNA-1:three_prime_utr;Parent=Msa1325830-mRNA-1
Gene Sequence

>Msa1325830

ATGTCATCCACCACCACTCCCACAAAGACCCCATCCACATCCACCCGGTCAAGAAAGCACTCCGATTCCAAATCTCGCTTCGAAGCTTACAACCGCCTCCAAGCCGCTGCTGTCGCTTTTGGCGAGACTCTCCCCATCCCTGAAATTGTTGCCGTTGGTGGCCAATCTGATGGAAAGAGCTCCCTTCTCGAAGCACTCCTCGGTTTTCGCTTCAATGTCCGTGAAGTTGAGATGGGTACTCGCCGCCCTCTTATTCTTCAAATGCTTCACGATCCCTCTGCTCTTGAACCTCGCTGCCGCTTCCAGGAGGAAGATTCAGAAGAGTATGGAAGTCCGGTGGTTTCGGCATCTACGATTGCTGACATTATAAAGTCTCGAACCGAAGCACTTTTGAAGATAACCAAAACGGCAGTTTCTCCTAAGCCAATTGTACTCAAAGCTGAATACGCACACTGTCCAAATCTCACCATTATTGACACACCGGGGTTTGTTCTCAAGGCGAAGAAGGGTGAACCGGAGAACACGCCTGATGAGATTCTTTCCATGGTGAAGACATTGGCTACTCCTCCACACCGTATACTCTTGTTCCTTCAGCAAAGTAGTGTGGAATGGTGCTCCTCTTTGTGGTTGGACTCTATTCGTGAAATTGATCCCACGTTTAGACGGACAATCATTGTTGTCTCCAAATTTGATAATCGTCTCAAGGAATTTACTGATAGGTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGACAACACTCGCCCTTTTTTTGTGGCCCTGCCTAAGGATAGGGGCAACATTTCAAATGAAGAGTTCCGCAGGCAGATCTCTCATGTGGACTCGGAGGTTATGCATCATCTCCGCGATGGTGTCAAGGGAGGTTTTGATGAAGAAAAGTTCAAGTCCTATATTGGTTTTGGCCGTCTGAGGGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCTGCTCCATCAACTCTTGCCTTGCTTGAGCAAAGGTGTAGTGAGGTCACTTGTGAACTTGCTGGATTGGATTCAAAAATTGAGGCCACTTCAGATATTTCTCATCTGAGGAAATTTGCTATGCTGTGTGCAGCTTCTATCAGCAACCATGTGGGTGCCTTGATTGATGGTGCAGCAGATCCTTCCCCCGAGCAGTGGGGAAAAACAACAGTAGAAGAGCGCTCTCAAAGTGGCATTGGGATTTGGCCTGGCGTCATCACCGATGTGAACCCTCCCAATGCCAGTCTTCGTCTTTATGGAGGGGCTGCATTTGAGAGGGTGATCCATGAATTTCGTTGTGCTGCATATTCCATTGAATGCCCCCCAGTCTCGAGGGAAAAGGTTGCAAATATATTACTTGCCCATGCTGGCCGTGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTTGATACTGCATGTGACCGCCTTGCTTTTGTTTTAGGAAGCTTATTTGATTTGGCTCTAGAAAGAAACCGTAGGCATGATTCAGCATATGGGATAAAAACGGGAAACATGGATGGCTATGTAGGTTTTCATGCTGCTTTAAGGTGTGCTTACACTCGGTTCTTAAAGGATCTTGCTAAGCAGTGCAAGCAGCTTGTTAGGCACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGACTTTCAACCATGTGCCGGCATAAACGCTTCAAGTTTCAACAAATTTCCCCAGGCTTCAGCCTCTTCATTTTTTCTTGAATTGAGTGATACAAATTCTGCTTCTCATGATGTAAGGAGGGATCAAGAAAATATACCTCCAGAAAAGAATGCACTGGAGGAAACAACACCAGGTAAAGCAGCACACGTTCGAGAGAGTTTGCGAGAAAGCCAGATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCTGTATATGGAGGGCATAGAAAGGAGCTTGGAATATGCAATGACATGGGGCCAAGAAAGAGAGCGTCTAGAATGACAGGAAATGGCAAAAATTCTGACTATATTAGACTTCAAAATGATTCCATTTTATTTGGAAATGGGGAGAGAACAGGATCAGCGTACTCAGAAATCTGTTTATCAGCTGCCCAGCATTTCGCACGTATACGTGAAGTTCTTGTTGAAAGAGGCGTTACATCGACATTAAACTCTGGATTCCTGACTCCTTGCCGCGATCGCCTTGTTGTGGCTCTCGGGTTGGATTTATTTGCTGTGAACGATGAGAAATTCATGGACATGTTTGTCGCTCCTGGTGCCATAGATGTGCTACAAAATGAACGCGAGTCTCTTATGAAGCGTCAGAAGATACTCCATTCTTGCTTGAATGAGTTCAAAAACGTTGCTCGGTCCCTTTGA
Protein sequence

>Msa1325830

MSSTTTPTKTPSTSTRSRKHSDSKSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMLHDPSALEPRCRFQEEDSEEYGSPVVSASTIADIIKSRTEALLKITKTAVSPKPIVLKAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKTLATPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTIIVVSKFDNRLKEFTDRWEVDRYLSASGYLGDNTRPFFVALPKDRGNISNEEFRRQISHVDSEVMHHLRDGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPSTLALLEQRCSEVTCELAGLDSKIEATSDISHLRKFAMLCAASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGIWPGVITDVNPPNASLRLYGGAAFERVIHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGLTEAAAEIARAAARSWLAPLLDTACDRLAFVLGSLFDLALERNRRHDSAYGIKTGNMDGYVGFHAALRCAYTRFLKDLAKQCKQLVRHHLDSVTSPYSQVCYFNDFQPCAGINASSFNKFPQASASSFFLELSDTNSASHDVRRDQENIPPEKNALEETTPGKAAHVRESLRESQMTIPETPSPDQPGDPVYGGHRKELGICNDMGPRKRASRMTGNGKNSDYIRLQNDSILFGNGERTGSAYSEICLSAAQHFARIREVLVERGVTSTLNSGFLTPCRDRLVVALGLDLFAVNDEKFMDMFVAPGAIDVLQNERESLMKRQKILHSCLNEFKNVARSL*