AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648040 MtrunA17_Chr4g0039551 86.533 698 60 6 1 696 1 666 0.0 1124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648040 AT3G03130.1 39.234 209 96 8 1 205 1 182 1.02e-24 108
Msa0648040 AT5G17160.1 33.071 254 99 6 1 232 1 205 4.48e-20 95.1

Find 161 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTCTGAACCCTCTTCTTT+TGG 0.230668 4_3:+54407856 None:intergenic
TTCAGAAACATCATCATTCT+TGG 0.233698 4_3:+54408186 None:intergenic
TTGAAATGTGGAACTCTCTT+TGG 0.254487 4_3:-54406464 Msa0648040:three_prime_UTR
TTCTGCTGAAATTGAAAATA+AGG 0.284898 4_3:-54407596 Msa0648040:CDS
CACTCTACCTTCTCTGGTTC+AGG 0.287240 4_3:+54407136 None:intergenic
ACATTCAAAGGGGCAATAAC+TGG 0.287312 4_3:+54407349 None:intergenic
TCTTCTCCACTCCCTGCATT+TGG 0.315762 4_3:+54406582 None:intergenic
AAAAGCAAAACAAGTTGTTT+TGG 0.346529 4_3:+54409288 None:intergenic
AGCAGGAATCTTGTTCATCT+TGG 0.352822 4_3:+54409204 None:intergenic
GAAAGCCAGTCACATGATTC+TGG 0.357776 4_3:-54407925 Msa0648040:CDS
GGCATCTGAAGAAGCTTATA+AGG 0.358283 4_3:-54407383 Msa0648040:CDS
AGGAACTGCTTGAATTTCAT+TGG 0.368042 4_3:+54406751 None:intergenic
TGCATGTTCCTCAGATTCAT+TGG 0.375527 4_3:+54406907 None:intergenic
CTGTCTTGCAGATTTAAACT+TGG 0.380530 4_3:+54407802 None:intergenic
GAAGGATACTTCTGAGAAAC+AGG 0.383185 4_3:-54406945 Msa0648040:CDS
GCATAACCAAACCAAAGGTT+TGG 0.383631 4_3:+54406418 None:intergenic
CAAAATCCAAACCTTTGGTT+TGG 0.383702 4_3:-54406424 Msa0648040:three_prime_UTR
ATTGAAAATAAGGAATGCTT+TGG 0.386548 4_3:-54407586 Msa0648040:CDS
CACCAGGAGGTCCGTGAGAT+TGG 0.391312 4_3:-54408263 Msa0648040:CDS
GACGTCAAAATCCAAACCTT+TGG 0.395669 4_3:-54406429 Msa0648040:three_prime_UTR
GAGCTTGTCAAAGATGAGTT+TGG 0.403289 4_3:-54408233 Msa0648040:CDS
GAGACTGCTGTGGTGCCTAA+TGG 0.404572 4_3:-54407214 Msa0648040:CDS
TGATGCAGAGGATGTGTTGC+AGG 0.411045 4_3:-54407884 Msa0648040:CDS
GATACACACTCTACCTTCTC+TGG 0.413375 4_3:+54407130 None:intergenic
TAAGTGAATTTCAGTAATGT+TGG 0.414137 4_3:-54406497 Msa0648040:three_prime_UTR
ATCTCTTCAGAAGACTCTTC+AGG 0.414400 4_3:+54407259 None:intergenic
ACTAGCTTTCTGAAAATCAA+TGG 0.418698 4_3:+54406676 None:intergenic
AGGATCTGAGCAGCCTGAAC+AGG 0.426452 4_3:-54407632 Msa0648040:CDS
GAAAGAAGCTGAAAGCTCTA+AGG 0.427642 4_3:-54408605 Msa0648040:CDS
ATGGTTTCTGAGCAGATAAA+TGG 0.429962 4_3:-54406815 Msa0648040:CDS
CCAGTACCACTCTCAATACT+AGG 0.435481 4_3:+54406731 None:intergenic
TTCTGACTGAGCTGGGCAAA+GGG 0.438060 4_3:+54406787 None:intergenic
ACATCCACAAAAGCATCTTC+AGG 0.439980 4_3:+54407439 None:intergenic
GTTCCTAACCAAGATGTTGC+TGG 0.449433 4_3:-54407418 Msa0648040:CDS
GAGCTTTCAGCTTCTTTCAC+CGG 0.458995 4_3:+54408610 None:intergenic
CCTAGTATTGAGAGTGGTAC+TGG 0.465761 4_3:-54406731 Msa0648040:CDS
TGGTACCTGATGATGCTTGT+GGG 0.466839 4_3:-54407324 Msa0648040:CDS
GATGGAACTTCTGGTGACTC+TGG 0.468489 4_3:-54407085 Msa0648040:CDS
AACTAGTGATATAGAGTCAA+TGG 0.475796 4_3:-54406834 Msa0648040:CDS
CCCAGCTCAGTCAGAAATCA+AGG 0.476348 4_3:-54406780 Msa0648040:CDS
TCCTTGATTTCTGACTGAGC+TGG 0.477329 4_3:+54406779 None:intergenic
GAAGGTAGAGTGTGTATCTT+CGG 0.478549 4_3:-54407125 Msa0648040:CDS
TAAGAATGAGGTTCAAGAAA+AGG 0.483344 4_3:-54408401 Msa0648040:CDS
CAAGAGCTAGTCGTTCGGTT+CGG 0.485521 4_3:-54408333 Msa0648040:CDS
CTGCTGTTGGTAGTAGGAGA+AGG 0.486707 4_3:-54408489 Msa0648040:CDS
CAGTCAAAGAAGCAATAGTT+TGG 0.491962 4_3:+54407470 None:intergenic
CAGACATATCAGCAACATCT+TGG 0.492555 4_3:+54407290 None:intergenic
AGCACTGCCACAGAATCAAC+TGG 0.493549 4_3:-54406543 Msa0648040:CDS
TCTCGTGTATCTGTCTGAAT+CGG 0.497429 4_3:-54409329 Msa0648040:five_prime_UTR
TTGAACTGATTGTAGGTTGA+AGG 0.498721 4_3:-54408727 Msa0648040:intron
CACCAATCTCACGGACCTCC+TGG 0.499335 4_3:+54408261 None:intergenic
TTAGGCACCACAGCAGTCTC+AGG 0.501559 4_3:+54407217 None:intergenic
ATGAGTGTCTCCCAGAATGA+AGG 0.502489 4_3:-54408160 Msa0648040:CDS
CCAACATCACCACCTTCCCT+TGG 0.503361 4_3:+54408685 None:intergenic
GTAGTTCTACGAGCTGTTCG+TGG 0.505614 4_3:+54408646 None:intergenic
GCAACATTGGTGATATTAGC+AGG 0.506497 4_3:+54409187 None:intergenic
TTTGCGGGTTCTCAAGAAGT+TGG 0.506912 4_3:-54406654 Msa0648040:CDS
GAGACAAGCCAGCAACATCT+TGG 0.507441 4_3:+54407410 None:intergenic
TTTCTGACTGAGCTGGGCAA+AGG 0.508078 4_3:+54406786 None:intergenic
CAGGTACCACAACATTCAAA+GGG 0.510126 4_3:+54407338 None:intergenic
TCATCCCCACAAGCATCATC+AGG 0.511382 4_3:+54407319 None:intergenic
AGCGTCAGCCATGGCAACAT+TGG 0.512064 4_3:+54409174 None:intergenic
AAGCCAGCAACATCTTGGTT+AGG 0.512461 4_3:+54407415 None:intergenic
TCGATCTCAAATCTCAGCAA+TGG 0.512712 4_3:-54409266 Msa0648040:exon
TGCGCTGATTCAAATGAAGC+AGG 0.514107 4_3:-54407769 Msa0648040:intron
TGTCTTGCAGATTTAAACTT+GGG 0.515264 4_3:+54407803 None:intergenic
AGGGTTAGCCGTGGTGGTAG+AGG 0.519152 4_3:-54408574 Msa0648040:CDS
CCAAGGGAAGGTGGTGATGT+TGG 0.519158 4_3:-54408685 Msa0648040:CDS
TGCAGAAGGCATACAGCACC+AGG 0.521391 4_3:-54408279 Msa0648040:CDS
CAGGAGGTCCGTGAGATTGG+TGG 0.523155 4_3:-54408260 Msa0648040:CDS
TATTGCCCCTTTGAATGTTG+TGG 0.523826 4_3:-54407344 Msa0648040:CDS
GGTAGAGGCGGAGTTGCTGA+AGG 0.524777 4_3:-54408559 Msa0648040:CDS
AACTACGACTCAAAGGAAAC+CGG 0.525787 4_3:-54408629 Msa0648040:CDS
TGTTGCTGGCTTGTCTCTTG+AGG 0.525980 4_3:-54407404 Msa0648040:CDS
CCTTGATTTCTGACTGAGCT+GGG 0.528460 4_3:+54406780 None:intergenic
AAAGAAAGAAGAAGATCAGA+AGG 0.530077 4_3:-54406963 Msa0648040:CDS
AGGAGGTCCGTGAGATTGGT+GGG 0.530257 4_3:-54408259 Msa0648040:CDS
CATTCTACAACTCTCAATGT+TGG 0.532664 4_3:-54406996 Msa0648040:CDS
ATGTGACTGGCTTTCACAGT+CGG 0.537942 4_3:+54407933 None:intergenic
TTCTCAGAACACTGATGAAG+TGG 0.539221 4_3:-54407977 Msa0648040:CDS
GCTGTTCGTGGTTGAACAGC+CGG 0.539606 4_3:+54408658 None:intergenic
GGCTCAATTGAGACTGAAAA+CGG 0.539870 4_3:-54408136 Msa0648040:intron
TCAGGTACCACAACATTCAA+AGG 0.540020 4_3:+54407337 None:intergenic
TGCTGTTGGTAGTAGGAGAA+GGG 0.540948 4_3:-54408488 Msa0648040:CDS
AGCTGAGAGAGCGTCAGCCA+TGG 0.542842 4_3:+54409165 None:intergenic
GTACTCCTGCTGTTGGTAGT+AGG 0.544663 4_3:-54408495 Msa0648040:CDS
TGGCAATCCTAATACGATGA+AGG 0.546509 4_3:-54406711 Msa0648040:CDS
TGATGAAACTTCAGTGCAGA+AGG 0.548635 4_3:-54408293 Msa0648040:CDS
CTCGTAGAACTACGACTCAA+AGG 0.551802 4_3:-54408636 Msa0648040:CDS
ATGCAGCAATCTCCATAGCT+TGG 0.554047 4_3:+54407551 None:intergenic
AGTTTCTACTCGCAGAAAGA+AGG 0.556570 4_3:-54408458 Msa0648040:CDS
TGAGTGTCTCCCAGAATGAA+GGG 0.557369 4_3:-54408159 Msa0648040:CDS
CATTCAAAGGGGCAATAACT+GGG 0.557703 4_3:+54407350 None:intergenic
AGAGAGTTCCACATTTCAAG+AGG 0.558313 4_3:+54406468 None:intergenic
CTGATTGTAGGTTGAAGGGT+TGG 0.560659 4_3:-54408722 Msa0648040:intron
GAAGTCTCTATAGCTCCATT+AGG 0.562424 4_3:+54407199 None:intergenic
TAATGATGATGTCCAAATGC+AGG 0.563195 4_3:-54406594 Msa0648040:CDS
TACTCAGCCAGTTGATTCTG+TGG 0.563934 4_3:+54406536 None:intergenic
GTTGGTGAAGGAGAAGTTAG+CGG 0.565443 4_3:-54406636 Msa0648040:CDS
GCTCTTTACGTGAGAGAGTG+TGG 0.574355 4_3:+54409239 None:intergenic
CTGAACCAGAATCATGTGAC+TGG 0.574401 4_3:+54407920 None:intergenic
GTTTGGTCAGCAATCTCCAC+AGG 0.574780 4_3:+54407487 None:intergenic
GGAGATTGCTGCATCTGAAG+AGG 0.576864 4_3:-54407542 Msa0648040:CDS
TGAACTGATTGTAGGTTGAA+GGG 0.577502 4_3:-54408726 Msa0648040:intron
ATTTGAACCTGAACCAGAGA+AGG 0.582000 4_3:-54407143 Msa0648040:CDS
CTAGCTCTTGTCCTACTGCT+AGG 0.582951 4_3:+54408346 None:intergenic
AGAGGTTGTCAATGATGTGG+AGG 0.583619 4_3:-54407839 Msa0648040:CDS
TAGAGGCGGAGTTGCTGAAG+GGG 0.583738 4_3:-54408557 Msa0648040:CDS
CTTGTCAAAGATGAGTTTGG+CGG 0.585321 4_3:-54408230 Msa0648040:CDS
TAGGACAAGAGCTAGTCGTT+CGG 0.587545 4_3:-54408338 Msa0648040:CDS
AGCTGAGCAAGACCAAGCTA+TGG 0.590087 4_3:-54407563 Msa0648040:CDS
GTTAGCCGTGGTGGTAGAGG+CGG 0.590505 4_3:-54408571 Msa0648040:CDS
AAAGCTCTAAGGTTTCTACA+AGG 0.590674 4_3:-54408594 Msa0648040:CDS
TTCAGAGGTTGTCAATGATG+TGG 0.593177 4_3:-54407842 Msa0648040:CDS
TCTACAAGGGTTAGCCGTGG+TGG 0.595736 4_3:-54408580 Msa0648040:CDS
AAAGATGCTAATGTAGCTGC+CGG 0.596201 4_3:-54408517 Msa0648040:CDS
TTTGGCGGACACTGAGGACA+CGG 0.596803 4_3:-54408215 Msa0648040:CDS
ACTACCAACAGCAGGAGTAC+CGG 0.597108 4_3:+54408498 None:intergenic
CTGCTGTAGCTCCTAGCAGT+AGG 0.598663 4_3:-54408357 Msa0648040:CDS
GCAGGCTGAACCAAAAGAAG+AGG 0.598862 4_3:-54407866 Msa0648040:CDS
GTAGAGGCGGAGTTGCTGAA+GGG 0.599107 4_3:-54408558 Msa0648040:CDS
GCTCTTCCCCACCAATCTCA+CGG 0.601608 4_3:+54408252 None:intergenic
AGTGAAATCAACTGATGCAG+AGG 0.603053 4_3:-54407896 Msa0648040:CDS
TAATATCACCAATGTTGCCA+TGG 0.610959 4_3:-54409182 Msa0648040:CDS
TGATGTCCAAATGCAGGGAG+TGG 0.611592 4_3:-54406588 Msa0648040:CDS
TCAAGAAAAGGCTATGAATG+TGG 0.615906 4_3:-54408389 Msa0648040:CDS
TTTCTGCGAGTAGAAACTGC+AGG 0.617291 4_3:+54408463 None:intergenic
CTTCTCCTACTACCAACAGC+AGG 0.618516 4_3:+54408490 None:intergenic
AGGTGGTGATGTTGGTACAC+CGG 0.622027 4_3:-54408677 Msa0648040:CDS
AAGCTCTAAGGTTTCTACAA+GGG 0.623138 4_3:-54408593 Msa0648040:CDS
ACAGTCGGCTTTGTTTAGAG+AGG 0.625691 4_3:+54407948 None:intergenic
TGCATCTGAAGAGGTTTCTG+TGG 0.629076 4_3:-54407533 Msa0648040:CDS
GTGGTACCTGATGATGCTTG+TGG 0.629889 4_3:-54407325 Msa0648040:CDS
CTACTGCTAGGAGCTACAGC+AGG 0.631861 4_3:+54408358 None:intergenic
GGAGATTGCTGCATCAGAAG+AGG 0.632413 4_3:-54407512 Msa0648040:CDS
TGACTCTGGAGCTGAAAATG+AGG 0.632609 4_3:-54407071 Msa0648040:CDS
GGATGAAACCTCTTGAAATG+TGG 0.632709 4_3:-54406476 Msa0648040:three_prime_UTR
ACCAAAAGAAGAGGGTTCAG+AGG 0.638218 4_3:-54407857 Msa0648040:CDS
AGAAGACACTGAGTTTGATG+AGG 0.640026 4_3:-54406879 Msa0648040:CDS
GGTTCTCAAGAAGTTGGTGA+AGG 0.640400 4_3:-54406648 Msa0648040:CDS
AGCACAAACCAATGAATCTG+AGG 0.641528 4_3:-54406915 Msa0648040:CDS
CAGGCTGAACCAAAAGAAGA+GGG 0.643045 4_3:-54407865 Msa0648040:CDS
GCTGCCGGTACTCCTGCTGT+TGG 0.646328 4_3:-54408502 Msa0648040:CDS
TGATGTGGAGGTTTCACATG+AGG 0.650771 4_3:-54407827 Msa0648040:CDS
GAGTGTCTCCCAGAATGAAG+GGG 0.652351 4_3:-54408158 Msa0648040:CDS
GGAGGTCCGTGAGATTGGTG+GGG 0.652841 4_3:-54408258 Msa0648040:CDS
AGCTATAGAGACTTCTTCAG+AGG 0.662401 4_3:-54407191 Msa0648040:CDS
GGTACCTGATGATGCTTGTG+GGG 0.662615 4_3:-54407323 Msa0648040:CDS
TTCGCAGACAGAATCAAATG+TGG 0.665529 4_3:-54408001 Msa0648040:CDS
TATTGCTCCTGAGACTGCTG+TGG 0.667509 4_3:-54407224 Msa0648040:CDS
TGCATCAGAAGAGGTTCCTG+TGG 0.672037 4_3:-54407503 Msa0648040:CDS
GCAGTTCCTAGTATTGAGAG+TGG 0.672883 4_3:-54406737 Msa0648040:CDS
AATGATGATGTCCAAATGCA+GGG 0.674488 4_3:-54406593 Msa0648040:CDS
TCTGACTGAGCTGGGCAAAG+GGG 0.676525 4_3:+54406788 None:intergenic
GTTTCTACAAGGGTTAGCCG+TGG 0.679018 4_3:-54408583 Msa0648040:CDS
GATGAGTTTGGCGGACACTG+AGG 0.679917 4_3:-54408221 Msa0648040:CDS
TGATGATGTTGATAAGAATG+AGG 0.682068 4_3:-54408413 Msa0648040:CDS
AGTGTCTCCCAGAATGAAGG+GGG 0.688959 4_3:-54408157 Msa0648040:CDS
AGGTACCACAACATTCAAAG+GGG 0.740202 4_3:+54407339 None:intergenic
CAACTCCGCCTCTACCACCA+CGG 0.745976 4_3:+54408566 None:intergenic
AGAAGGCATACAGCACCAGG+AGG 0.747195 4_3:-54408276 Msa0648040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAGTTCTTTATTTTTTAATT+TGG - chr4_3:54406543-54406562 Msa0648040:CDS 15.0%
!! TTTCATTAGATTTGTAAAAT+TGG - chr4_3:54406854-54406873 Msa0648040:CDS 15.0%
!! TTTACAAATCTAATGAAACA+TGG + chr4_3:54406852-54406871 None:intergenic 20.0%
!!! ATCATTACAATAAACTTTTG+CGG - chr4_3:54409290-54409309 Msa0648040:five_prime_UTR 20.0%
!!! AACAAGTTGTTTTGGTTTTT+GGG + chr4_3:54406353-54406372 None:intergenic 25.0%
!!! AAACAAGTTGTTTTGGTTTT+TGG + chr4_3:54406354-54406373 None:intergenic 25.0%
!! AAAAGCAAAACAAGTTGTTT+TGG + chr4_3:54406361-54406380 None:intergenic 25.0%
! AACTGAACTAAATCAAGAAA+TGG + chr4_3:54406528-54406547 None:intergenic 25.0%
! TGAAGTATATTAAGTCGATT+AGG - chr4_3:54406648-54406667 Msa0648040:CDS 25.0%
!! TCGATTAGGTTTTTCATTTT+AGG - chr4_3:54406662-54406681 Msa0648040:CDS 25.0%
!! CGATTAGGTTTTTCATTTTA+GGG - chr4_3:54406663-54406682 Msa0648040:CDS 25.0%
!! GATTAGGTTTTTCATTTTAG+GGG - chr4_3:54406664-54406683 Msa0648040:CDS 25.0%
!! TTGATTTTTATGATCTTGAC+TGG - chr4_3:54406702-54406721 Msa0648040:CDS 25.0%
! ACAATACAATACAGTTTCAA+TGG + chr4_3:54406782-54406801 None:intergenic 25.0%
!!! ATTTGATTTGAACTGATTGT+AGG - chr4_3:54406912-54406931 Msa0648040:CDS 25.0%
! TTCTGCTGAAATTGAAAATA+AGG - chr4_3:54408050-54408069 Msa0648040:intron 25.0%
! ATTGAAAATAAGGAATGCTT+TGG - chr4_3:54408060-54408079 Msa0648040:intron 25.0%
! TAAGTGAATTTCAGTAATGT+TGG - chr4_3:54409149-54409168 Msa0648040:intron 25.0%
AATGGAGAAAGATTTACATG+AGG + chr4_3:54406510-54406529 None:intergenic 30.0%
! TTTTATGATCTTGACTGGAT+TGG - chr4_3:54406707-54406726 Msa0648040:CDS 30.0%
! TGGATGAAATTTTGAATCCA+AGG - chr4_3:54406944-54406963 Msa0648040:CDS 30.0%
! GGATGAAATTTTGAATCCAA+GGG - chr4_3:54406945-54406964 Msa0648040:CDS 30.0%
! TGATGATGTTGATAAGAATG+AGG - chr4_3:54407233-54407252 Msa0648040:CDS 30.0%
TAAGAATGAGGTTCAAGAAA+AGG - chr4_3:54407245-54407264 Msa0648040:CDS 30.0%
TTCAGAAACATCATCATTCT+TGG + chr4_3:54407463-54407482 None:intergenic 30.0%
TGTCTTGCAGATTTAAACTT+GGG + chr4_3:54407846-54407865 None:intergenic 30.0%
!!! TTTGTTTTGCAATATGCTTG+TGG - chr4_3:54407900-54407919 Msa0648040:CDS 30.0%
! CTTGATGTTGATCATTTTAC+AGG - chr4_3:54407994-54408013 Msa0648040:CDS 30.0%
! GCTATTCTAGTTGAAAAAGA+TGG - chr4_3:54408543-54408562 Msa0648040:CDS 30.0%
!!! CTTTTTTGTCTTCAAAGGAT+TGG + chr4_3:54408608-54408627 None:intergenic 30.0%
!!! GCTTTCTTTTTTGTCTTCAA+AGG + chr4_3:54408613-54408632 None:intergenic 30.0%
GAAGACAAAAAAGAAAGCAA+CGG - chr4_3:54408615-54408634 Msa0648040:CDS 30.0%
AAAGAAAGAAGAAGATCAGA+AGG - chr4_3:54408683-54408702 Msa0648040:CDS 30.0%
AACTAGTGATATAGAGTCAA+TGG - chr4_3:54408812-54408831 Msa0648040:intron 30.0%
!! ACTAGCTTTCTGAAAATCAA+TGG + chr4_3:54408973-54408992 None:intergenic 30.0%
!! ATTTTCAGAAAGCTAGTTTG+CGG - chr4_3:54408976-54408995 Msa0648040:intron 30.0%
! AAAAAGCATAACCAAACCAA+AGG + chr4_3:54409236-54409255 None:intergenic 30.0%
!!! GTTGTTTTGGTTTTTGGGAA+TGG + chr4_3:54406348-54406367 None:intergenic 35.0%
TAATATCACCAATGTTGCCA+TGG - chr4_3:54406464-54406483 Msa0648040:three_prime_UTR 35.0%
!! CATTTTAGGGGTTTTCAGTT+CGG - chr4_3:54406676-54406695 Msa0648040:CDS 35.0%
! TTGAACTGATTGTAGGTTGA+AGG - chr4_3:54406919-54406938 Msa0648040:CDS 35.0%
! TGAACTGATTGTAGGTTGAA+GGG - chr4_3:54406920-54406939 Msa0648040:CDS 35.0%
! GAAATTTTGAATCCAAGGGA+AGG - chr4_3:54406949-54406968 Msa0648040:CDS 35.0%
!! AAAGCTCTAAGGTTTCTACA+AGG - chr4_3:54407052-54407071 Msa0648040:CDS 35.0%
!! AAGCTCTAAGGTTTCTACAA+GGG - chr4_3:54407053-54407072 Msa0648040:CDS 35.0%
TCAAGAAAAGGCTATGAATG+TGG - chr4_3:54407257-54407276 Msa0648040:CDS 35.0%
CTGTCTTGCAGATTTAAACT+TGG + chr4_3:54407847-54407866 None:intergenic 35.0%
CAGTCAAAGAAGCAATAGTT+TGG + chr4_3:54408179-54408198 None:intergenic 35.0%
GTTGAAAAAGATGGAACTTC+TGG - chr4_3:54408552-54408571 Msa0648040:CDS 35.0%
CATTCTACAACTCTCAATGT+TGG - chr4_3:54408650-54408669 Msa0648040:CDS 35.0%
ATGGTTTCTGAGCAGATAAA+TGG - chr4_3:54408831-54408850 Msa0648040:intron 35.0%
AGGAACTGCTTGAATTTCAT+TGG + chr4_3:54408898-54408917 None:intergenic 35.0%
! GAGTTTTCCTTCATCGTATT+AGG + chr4_3:54408945-54408964 None:intergenic 35.0%
!! TTTTCAGAAAGCTAGTTTGC+GGG - chr4_3:54408977-54408996 Msa0648040:intron 35.0%
! TAATGATGATGTCCAAATGC+AGG - chr4_3:54409052-54409071 Msa0648040:intron 35.0%
! AATGATGATGTCCAAATGCA+GGG - chr4_3:54409053-54409072 Msa0648040:intron 35.0%
TTGAAATGTGGAACTCTCTT+TGG - chr4_3:54409182-54409201 Msa0648040:CDS 35.0%
CAAAATCCAAACCTTTGGTT+TGG - chr4_3:54409222-54409241 Msa0648040:CDS 35.0%
!!! GTTTTGGTTTTTGGGAATGG+AGG + chr4_3:54406345-54406364 None:intergenic 40.0%
TCGATCTCAAATCTCAGCAA+TGG - chr4_3:54406380-54406399 Msa0648040:three_prime_UTR 40.0%
AGCAGGAATCTTGTTCATCT+TGG + chr4_3:54406445-54406464 None:intergenic 40.0%
! GCAACATTGGTGATATTAGC+AGG + chr4_3:54406462-54406481 None:intergenic 40.0%
! ATTTTGAATCCAAGGGAAGG+TGG - chr4_3:54406952-54406971 Msa0648040:CDS 40.0%
AACTACGACTCAAAGGAAAC+CGG - chr4_3:54407017-54407036 Msa0648040:CDS 40.0%
GAAAGAAGCTGAAAGCTCTA+AGG - chr4_3:54407041-54407060 Msa0648040:CDS 40.0%
AAAGATGCTAATGTAGCTGC+CGG - chr4_3:54407129-54407148 Msa0648040:CDS 40.0%
AGTTTCTACTCGCAGAAAGA+AGG - chr4_3:54407188-54407207 Msa0648040:CDS 40.0%
TGATGAAACTTCAGTGCAGA+AGG - chr4_3:54407353-54407372 Msa0648040:CDS 40.0%
GAGCTTGTCAAAGATGAGTT+TGG - chr4_3:54407413-54407432 Msa0648040:CDS 40.0%
CTTGTCAAAGATGAGTTTGG+CGG - chr4_3:54407416-54407435 Msa0648040:CDS 40.0%
GGCTCAATTGAGACTGAAAA+CGG - chr4_3:54407510-54407529 Msa0648040:CDS 40.0%
TTCGCAGACAGAATCAAATG+TGG - chr4_3:54407645-54407664 Msa0648040:intron 40.0%
TTCTCAGAACACTGATGAAG+TGG - chr4_3:54407669-54407688 Msa0648040:intron 40.0%
AGTGAAATCAACTGATGCAG+AGG - chr4_3:54407750-54407769 Msa0648040:intron 40.0%
TTCAGAGGTTGTCAATGATG+TGG - chr4_3:54407804-54407823 Msa0648040:CDS 40.0%
! TCACAAGTTTTCTCCTGTTC+AGG + chr4_3:54408030-54408049 None:intergenic 40.0%
! TGAACCTGAAGATGCTTTTG+TGG - chr4_3:54408203-54408222 Msa0648040:CDS 40.0%
!! ACATCCACAAAAGCATCTTC+AGG + chr4_3:54408210-54408229 None:intergenic 40.0%
GGCATCTGAAGAAGCTTATA+AGG - chr4_3:54408263-54408282 Msa0648040:CDS 40.0%
CATTCAAAGGGGCAATAACT+GGG + chr4_3:54408299-54408318 None:intergenic 40.0%
ACATTCAAAGGGGCAATAAC+TGG + chr4_3:54408300-54408319 None:intergenic 40.0%
TATTGCCCCTTTGAATGTTG+TGG - chr4_3:54408302-54408321 Msa0648040:CDS 40.0%
AGGTACCACAACATTCAAAG+GGG + chr4_3:54408310-54408329 None:intergenic 40.0%
CAGGTACCACAACATTCAAA+GGG + chr4_3:54408311-54408330 None:intergenic 40.0%
TCAGGTACCACAACATTCAA+AGG + chr4_3:54408312-54408331 None:intergenic 40.0%
CAGACATATCAGCAACATCT+TGG + chr4_3:54408359-54408378 None:intergenic 40.0%
ATCTCTTCAGAAGACTCTTC+AGG + chr4_3:54408390-54408409 None:intergenic 40.0%
GAAGTCTCTATAGCTCCATT+AGG + chr4_3:54408450-54408469 None:intergenic 40.0%
AGCTATAGAGACTTCTTCAG+AGG - chr4_3:54408455-54408474 Msa0648040:CDS 40.0%
ATTTGAACCTGAACCAGAGA+AGG - chr4_3:54408503-54408522 Msa0648040:CDS 40.0%
GAAGGTAGAGTGTGTATCTT+CGG - chr4_3:54408521-54408540 Msa0648040:CDS 40.0%
! GAAGGATACTTCTGAGAAAC+AGG - chr4_3:54408701-54408720 Msa0648040:CDS 40.0%
AGCACAAACCAATGAATCTG+AGG - chr4_3:54408731-54408750 Msa0648040:intron 40.0%
TGCATGTTCCTCAGATTCAT+TGG + chr4_3:54408742-54408761 None:intergenic 40.0%
AGAAGACACTGAGTTTGATG+AGG - chr4_3:54408767-54408786 Msa0648040:intron 40.0%
TGGCAATCCTAATACGATGA+AGG - chr4_3:54408935-54408954 Msa0648040:intron 40.0%
GGATGAAACCTCTTGAAATG+TGG - chr4_3:54409170-54409189 Msa0648040:CDS 40.0%
AGAGAGTTCCACATTTCAAG+AGG + chr4_3:54409181-54409200 None:intergenic 40.0%
GACGTCAAAATCCAAACCTT+TGG - chr4_3:54409217-54409236 Msa0648040:CDS 40.0%
GCATAACCAAACCAAAGGTT+TGG + chr4_3:54409231-54409250 None:intergenic 40.0%
! CTGATTGTAGGTTGAAGGGT+TGG - chr4_3:54406924-54406943 Msa0648040:CDS 45.0%
CTCGTAGAACTACGACTCAA+AGG - chr4_3:54407010-54407029 Msa0648040:CDS 45.0%
GAGCTTTCAGCTTCTTTCAC+CGG + chr4_3:54407039-54407058 None:intergenic 45.0%
!! TGCTGTTGGTAGTAGGAGAA+GGG - chr4_3:54407158-54407177 Msa0648040:CDS 45.0%
TTTCTGCGAGTAGAAACTGC+AGG + chr4_3:54407186-54407205 None:intergenic 45.0%
TAGGACAAGAGCTAGTCGTT+CGG - chr4_3:54407308-54407327 Msa0648040:CDS 45.0%
ATGAGTGTCTCCCAGAATGA+AGG - chr4_3:54407486-54407505 Msa0648040:CDS 45.0%
TGAGTGTCTCCCAGAATGAA+GGG - chr4_3:54407487-54407506 Msa0648040:CDS 45.0%
AATTGAGCCCCCTTCATTCT+GGG + chr4_3:54407499-54407518 None:intergenic 45.0%
!! ACAGTCGGCTTTGTTTAGAG+AGG + chr4_3:54407701-54407720 None:intergenic 45.0%
!! ATGTGACTGGCTTTCACAGT+CGG + chr4_3:54407716-54407735 None:intergenic 45.0%
GAAAGCCAGTCACATGATTC+TGG - chr4_3:54407721-54407740 Msa0648040:intron 45.0%
CTGAACCAGAATCATGTGAC+TGG + chr4_3:54407729-54407748 None:intergenic 45.0%
CAGGCTGAACCAAAAGAAGA+GGG - chr4_3:54407781-54407800 Msa0648040:CDS 45.0%
ACCAAAAGAAGAGGGTTCAG+AGG - chr4_3:54407789-54407808 Msa0648040:CDS 45.0%
! ACCTCTGAACCCTCTTCTTT+TGG + chr4_3:54407793-54407812 None:intergenic 45.0%
AGAGGTTGTCAATGATGTGG+AGG - chr4_3:54407807-54407826 Msa0648040:CDS 45.0%
TGATGTGGAGGTTTCACATG+AGG - chr4_3:54407819-54407838 Msa0648040:CDS 45.0%
!! TGCGCTGATTCAAATGAAGC+AGG - chr4_3:54407877-54407896 Msa0648040:CDS 45.0%
ATGCAGCAATCTCCATAGCT+TGG + chr4_3:54408098-54408117 None:intergenic 45.0%
TGCATCTGAAGAGGTTTCTG+TGG - chr4_3:54408113-54408132 Msa0648040:intron 45.0%
GTTCCTAACCAAGATGTTGC+TGG - chr4_3:54408228-54408247 Msa0648040:CDS 45.0%
AAGCCAGCAACATCTTGGTT+AGG + chr4_3:54408234-54408253 None:intergenic 45.0%
! TGGTACCTGATGATGCTTGT+GGG - chr4_3:54408322-54408341 Msa0648040:CDS 45.0%
GATACACACTCTACCTTCTC+TGG + chr4_3:54408519-54408538 None:intergenic 45.0%
!! TGACTCTGGAGCTGAAAATG+AGG - chr4_3:54408575-54408594 Msa0648040:CDS 45.0%
CCTTGATTTCTGACTGAGCT+GGG + chr4_3:54408869-54408888 None:intergenic 45.0%
TCCTTGATTTCTGACTGAGC+TGG + chr4_3:54408870-54408889 None:intergenic 45.0%
! GCAGTTCCTAGTATTGAGAG+TGG - chr4_3:54408909-54408928 Msa0648040:intron 45.0%
CCAGTACCACTCTCAATACT+AGG + chr4_3:54408918-54408937 None:intergenic 45.0%
! CCTAGTATTGAGAGTGGTAC+TGG - chr4_3:54408915-54408934 Msa0648040:intron 45.0%
TTTGCGGGTTCTCAAGAAGT+TGG - chr4_3:54408992-54409011 Msa0648040:intron 45.0%
!! GGTTCTCAAGAAGTTGGTGA+AGG - chr4_3:54408998-54409017 Msa0648040:intron 45.0%
! GTTGGTGAAGGAGAAGTTAG+CGG - chr4_3:54409010-54409029 Msa0648040:intron 45.0%
! TACTCAGCCAGTTGATTCTG+TGG + chr4_3:54409113-54409132 None:intergenic 45.0%
GCTCTTTACGTGAGAGAGTG+TGG + chr4_3:54406410-54406429 None:intergenic 50.0%
! AGGTGGTGATGTTGGTACAC+CGG - chr4_3:54406969-54406988 Msa0648040:CDS 50.0%
! GTAGTTCTACGAGCTGTTCG+TGG + chr4_3:54407003-54407022 None:intergenic 50.0%
!! GTTTCTACAAGGGTTAGCCG+TGG - chr4_3:54407063-54407082 Msa0648040:CDS 50.0%
! ACTACCAACAGCAGGAGTAC+CGG + chr4_3:54407151-54407170 None:intergenic 50.0%
!! GTACTCCTGCTGTTGGTAGT+AGG - chr4_3:54407151-54407170 Msa0648040:CDS 50.0%
CTTCTCCTACTACCAACAGC+AGG + chr4_3:54407159-54407178 None:intergenic 50.0%
!! CTGCTGTTGGTAGTAGGAGA+AGG - chr4_3:54407157-54407176 Msa0648040:CDS 50.0%
! CTAGCTCTTGTCCTACTGCT+AGG + chr4_3:54407303-54407322 None:intergenic 50.0%
CAAGAGCTAGTCGTTCGGTT+CGG - chr4_3:54407313-54407332 Msa0648040:CDS 50.0%
GAGTGTCTCCCAGAATGAAG+GGG - chr4_3:54407488-54407507 Msa0648040:CDS 50.0%
AGTGTCTCCCAGAATGAAGG+GGG - chr4_3:54407489-54407508 Msa0648040:CDS 50.0%
CAATTGAGCCCCCTTCATTC+TGG + chr4_3:54407500-54407519 None:intergenic 50.0%
TGATGCAGAGGATGTGTTGC+AGG - chr4_3:54407762-54407781 Msa0648040:intron 50.0%
GCAGGCTGAACCAAAAGAAG+AGG - chr4_3:54407780-54407799 Msa0648040:CDS 50.0%
AGCTGAGCAAGACCAAGCTA+TGG - chr4_3:54408083-54408102 Msa0648040:intron 50.0%
GGAGATTGCTGCATCTGAAG+AGG - chr4_3:54408104-54408123 Msa0648040:intron 50.0%
GGAGATTGCTGCATCAGAAG+AGG - chr4_3:54408134-54408153 Msa0648040:intron 50.0%
TGCATCAGAAGAGGTTCCTG+TGG - chr4_3:54408143-54408162 Msa0648040:CDS 50.0%
GTTTGGTCAGCAATCTCCAC+AGG + chr4_3:54408162-54408181 None:intergenic 50.0%
GAGACAAGCCAGCAACATCT+TGG + chr4_3:54408239-54408258 None:intergenic 50.0%
!! TGTTGCTGGCTTGTCTCTTG+AGG - chr4_3:54408242-54408261 Msa0648040:CDS 50.0%
! GTGGTACCTGATGATGCTTG+TGG - chr4_3:54408321-54408340 Msa0648040:CDS 50.0%
! GGTACCTGATGATGCTTGTG+GGG - chr4_3:54408323-54408342 Msa0648040:CDS 50.0%
TCATCCCCACAAGCATCATC+AGG + chr4_3:54408330-54408349 None:intergenic 50.0%
TATTGCTCCTGAGACTGCTG+TGG - chr4_3:54408422-54408441 Msa0648040:CDS 50.0%
! CACTCTACCTTCTCTGGTTC+AGG + chr4_3:54408513-54408532 None:intergenic 50.0%
GATGGAACTTCTGGTGACTC+TGG - chr4_3:54408561-54408580 Msa0648040:CDS 50.0%
TTCTGACTGAGCTGGGCAAA+GGG + chr4_3:54408862-54408881 None:intergenic 50.0%
TTTCTGACTGAGCTGGGCAA+AGG + chr4_3:54408863-54408882 None:intergenic 50.0%
CCCAGCTCAGTCAGAAATCA+AGG - chr4_3:54408866-54408885 Msa0648040:intron 50.0%
TGATGTCCAAATGCAGGGAG+TGG - chr4_3:54409058-54409077 Msa0648040:intron 50.0%
TCTTCTCCACTCCCTGCATT+TGG + chr4_3:54409067-54409086 None:intergenic 50.0%
AGCACTGCCACAGAATCAAC+TGG - chr4_3:54409103-54409122 Msa0648040:intron 50.0%
AGCGTCAGCCATGGCAACAT+TGG + chr4_3:54406475-54406494 None:intergenic 55.0%
CCAACATCACCACCTTCCCT+TGG + chr4_3:54406964-54406983 None:intergenic 55.0%
! CCAAGGGAAGGTGGTGATGT+TGG - chr4_3:54406961-54406980 Msa0648040:CDS 55.0%
GCTGTTCGTGGTTGAACAGC+CGG + chr4_3:54406991-54407010 None:intergenic 55.0%
!! TCTACAAGGGTTAGCCGTGG+TGG - chr4_3:54407066-54407085 Msa0648040:CDS 55.0%
GTAGAGGCGGAGTTGCTGAA+GGG - chr4_3:54407088-54407107 Msa0648040:CDS 55.0%
TAGAGGCGGAGTTGCTGAAG+GGG - chr4_3:54407089-54407108 Msa0648040:CDS 55.0%
CTACTGCTAGGAGCTACAGC+AGG + chr4_3:54407291-54407310 None:intergenic 55.0%
CTGCTGTAGCTCCTAGCAGT+AGG - chr4_3:54407289-54407308 Msa0648040:CDS 55.0%
! TGCAGAAGGCATACAGCACC+AGG - chr4_3:54407367-54407386 Msa0648040:CDS 55.0%
! AGAAGGCATACAGCACCAGG+AGG - chr4_3:54407370-54407389 Msa0648040:CDS 55.0%
AGGAGGTCCGTGAGATTGGT+GGG - chr4_3:54407387-54407406 Msa0648040:CDS 55.0%
GCTCTTCCCCACCAATCTCA+CGG + chr4_3:54407397-54407416 None:intergenic 55.0%
! GATGAGTTTGGCGGACACTG+AGG - chr4_3:54407425-54407444 Msa0648040:CDS 55.0%
! TTTGGCGGACACTGAGGACA+CGG - chr4_3:54407431-54407450 Msa0648040:CDS 55.0%
AGGATCTGAGCAGCCTGAAC+AGG - chr4_3:54408014-54408033 Msa0648040:intron 55.0%
TTAGGCACCACAGCAGTCTC+AGG + chr4_3:54408432-54408451 None:intergenic 55.0%
GAGACTGCTGTGGTGCCTAA+TGG - chr4_3:54408432-54408451 Msa0648040:CDS 55.0%
TCTGACTGAGCTGGGCAAAG+GGG + chr4_3:54408861-54408880 None:intergenic 55.0%
!! AGCTGAGAGAGCGTCAGCCA+TGG + chr4_3:54406484-54406503 None:intergenic 60.0%
!! AGGGTTAGCCGTGGTGGTAG+AGG - chr4_3:54407072-54407091 Msa0648040:CDS 60.0%
GTTAGCCGTGGTGGTAGAGG+CGG - chr4_3:54407075-54407094 Msa0648040:CDS 60.0%
CAACTCCGCCTCTACCACCA+CGG + chr4_3:54407083-54407102 None:intergenic 60.0%
GGTAGAGGCGGAGTTGCTGA+AGG - chr4_3:54407087-54407106 Msa0648040:CDS 60.0%
CACCAGGAGGTCCGTGAGAT+TGG - chr4_3:54407383-54407402 Msa0648040:CDS 60.0%
CACCAATCTCACGGACCTCC+TGG + chr4_3:54407388-54407407 None:intergenic 60.0%
CAGGAGGTCCGTGAGATTGG+TGG - chr4_3:54407386-54407405 Msa0648040:CDS 60.0%
GGAGGTCCGTGAGATTGGTG+GGG - chr4_3:54407388-54407407 Msa0648040:CDS 60.0%
GCTGCCGGTACTCCTGCTGT+TGG - chr4_3:54407144-54407163 Msa0648040:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 54406318 54409350 54406318 ID=Msa0648040;Name=Msa0648040
chr4_3 mRNA 54406318 54409350 54406318 ID=Msa0648040-mRNA-1;Parent=Msa0648040;Name=Msa0648040-mRNA-1;_AED=0.03;_eAED=0.03;_QI=81|1|1|1|1|1|4|217|696
chr4_3 exon 54406318 54407652 54406318 ID=Msa0648040-mRNA-1:exon:13754;Parent=Msa0648040-mRNA-1
chr4_3 exon 54407770 54408030 54407770 ID=Msa0648040-mRNA-1:exon:13753;Parent=Msa0648040-mRNA-1
chr4_3 exon 54408137 54408734 54408137 ID=Msa0648040-mRNA-1:exon:13752;Parent=Msa0648040-mRNA-1
chr4_3 exon 54409156 54409350 54409156 ID=Msa0648040-mRNA-1:exon:13751;Parent=Msa0648040-mRNA-1
chr4_3 five_prime_UTR 54409270 54409350 54409270 ID=Msa0648040-mRNA-1:five_prime_utr;Parent=Msa0648040-mRNA-1
chr4_3 CDS 54409156 54409269 54409156 ID=Msa0648040-mRNA-1:cds;Parent=Msa0648040-mRNA-1
chr4_3 CDS 54408137 54408734 54408137 ID=Msa0648040-mRNA-1:cds;Parent=Msa0648040-mRNA-1
chr4_3 CDS 54407770 54408030 54407770 ID=Msa0648040-mRNA-1:cds;Parent=Msa0648040-mRNA-1
chr4_3 CDS 54406535 54407652 54406535 ID=Msa0648040-mRNA-1:cds;Parent=Msa0648040-mRNA-1
chr4_3 three_prime_UTR 54406318 54406534 54406318 ID=Msa0648040-mRNA-1:three_prime_utr;Parent=Msa0648040-mRNA-1
Gene Sequence

>Msa0648040

ATGGATTTCCACACTCTCTCACGTAAAGAGCTTCAAGCACTTTCCAAGATGAACAAGATTCCTGCTAATATCACCAATGTTGCCATGGCTGACGCTCTCTCAGCTCTTCCTCATGTTGAAGGGTTGGATGAAATTTTGAATCCAAGGGAAGGTGGTGATGTTGGTACACCGGCTGTTCAACCACGAACAGCTCGTAGAACTACGACTCAAAGGAAACCGGTGAAAGAAGCTGAAAGCTCTAAGGTTTCTACAAGGGTTAGCCGTGGTGGTAGAGGCGGAGTTGCTGAAGGGGAAGTTGAGCAAGAGAACAAAGATGCTAATGTAGCTGCCGGTACTCCTGCTGTTGGTAGTAGGAGAAGGGTTCCTGCAGTTTCTACTCGCAGAAAGAAGGAAGTGATTGTGATAGAAGATGATGATGATGTTGATAAGAATGAGGTTCAAGAAAAGGCTATGAATGTGGCTAAAACTCCTGCTGTAGCTCCTAGCAGTAGGACAAGAGCTAGTCGTTCGGTTCGGAACAAAACTGAGATCTCTGATGAAACTTCAGTGCAGAAGGCATACAGCACCAGGAGGTCCGTGAGATTGGTGGGGAAGAGCTTGTCAAAGATGAGTTTGGCGGACACTGAGGACACGGAATCAACCAAGAATGATGATGTTTCTGAAGAAATGAGTGTCTCCCAGAATGAAGGGGGCTCAATTGAGACTGAAAACGTGACTAGTTCGCAGACAGAATCAAATGTGGTTTCTCAGAACACTGATGAAGTGGAAGTTTCCTCTCTAAACAAAGCCGACTGTGAAAGCCAGTCACATGATTCTGGTTCAGAAGTGAAATCAACTGATGCAGAGGATGTGTTGCAGGCTGAACCAAAAGAAGAGGGTTCAGAGGTTGTCAATGATGTGGAGGTTTCACATGAGGACCCAAGTTTAAATCTGCAAGACAGTTTTGAGACATGCGCTGATTCAAATGAAGCAGGATCTGAGCAGCCTGAACAGGAGAAAACTTGTGATTCTGCTGAAATTGAAAATAAGGAATGCTTTGGAGCTGAGCAAGACCAAGCTATGGAGATTGCTGCATCTGAAGAGGTTTCTGTGGAGATTGCTGCATCAGAAGAGGTTCCTGTGGAGATTGCTGACCAAACTATTGCTTCTTTGACTGTTGCTGAACCTGAAGATGCTTTTGTGGATGTTCCTAACCAAGATGTTGCTGGCTTGTCTCTTGAGGCATCTGAAGAAGCTTATAAGGAGATTGCTGACCCAGTTATTGCCCCTTTGAATGTTGTGGTACCTGATGATGCTTGTGGGGATGATCTTGACCAAGATGTTGCTGATATGTCTGTTGTGTTACCTGAAGAGTCTTCTGAAGAGATTACTCAGCATGCTATTGCTCCTGAGACTGCTGTGGTGCCTAATGGAGCTATAGAGACTTCTTCAGAGGAGCATCAAGTAGAAGAAGAAGAAGTATTTGAACCTGAACCAGAGAAGGTAGAGTGTGTATCTTCGGCTATTCTAGTTGAAAAAGATGGAACTTCTGGTGACTCTGGAGCTGAAAATGAGGTCTGCATCCAATCCTTTGAAGACAAAAAAGAAAGCAACGGAGTTGAAGATGTCATTCTACAACTCTCAATGTTGGATGTAGCTGCAAAGAAAGAAGAAGATCAGAAGGATACTTCTGAGAAACAGGAAGCTGAAGCACAAACCAATGAATCTGAGGAACATGCAGTAGAAGAAGACACTGAGTTTGATGAGGTAGCTCATATCAATGATCAGAAAACTAGTGATATAGAGTCAATGGTTTCTGAGCAGATAAATGGAGAACCCCTTTGCCCAGCTCAGTCAGAAATCAAGGATATTGCCAATGAAATTCAAGCAGTTCCTAGTATTGAGAGTGGTACTGGCAATCCTAATACGATGAAGGAAAACTCGAAAACCATTGATTTTCAGAAAGCTAGTTTGCGGGTTCTCAAGAAGTTGGTGAAGGAGAAGTTAGCGGAAAAAACAAACATGATTGATAATGATGATGTCCAAATGCAGGGAGTGGAGAAGAAAAGAACTGCACTGCAAGCACTGCCACAGAATCAACTGGCTGAGTAA

Protein sequence

>Msa0648040

MDFHTLSRKELQALSKMNKIPANITNVAMADALSALPHVEGLDEILNPREGGDVGTPAVQPRTARRTTTQRKPVKEAESSKVSTRVSRGGRGGVAEGEVEQENKDANVAAGTPAVGSRRRVPAVSTRRKKEVIVIEDDDDVDKNEVQEKAMNVAKTPAVAPSSRTRASRSVRNKTEISDETSVQKAYSTRRSVRLVGKSLSKMSLADTEDTESTKNDDVSEEMSVSQNEGGSIETENVTSSQTESNVVSQNTDEVEVSSLNKADCESQSHDSGSEVKSTDAEDVLQAEPKEEGSEVVNDVEVSHEDPSLNLQDSFETCADSNEAGSEQPEQEKTCDSAEIENKECFGAEQDQAMEIAASEEVSVEIAASEEVPVEIADQTIASLTVAEPEDAFVDVPNQDVAGLSLEASEEAYKEIADPVIAPLNVVVPDDACGDDLDQDVADMSVVLPEESSEEITQHAIAPETAVVPNGAIETSSEEHQVEEEEVFEPEPEKVECVSSAILVEKDGTSGDSGAENEVCIQSFEDKKESNGVEDVILQLSMLDVAAKKEEDQKDTSEKQEAEAQTNESEEHAVEEDTEFDEVAHINDQKTSDIESMVSEQINGEPLCPAQSEIKDIANEIQAVPSIESGTGNPNTMKENSKTIDFQKASLRVLKKLVKEKLAEKTNMIDNDDVQMQGVEKKRTALQALPQNQLAE*