Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1331120 | sp|Q4V398|RRT1_ARATH | 72.746 | 477 | 121 | 3 | 35 | 510 | 31 | 499 | 0.0 | 742 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1331120 | A0A072URS3 | 97.885 | 520 | 8 | 2 | 1 | 519 | 1 | 518 | 0.0 | 1052 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0052870 | Msa1331120 | 0.808172 | 3.528440e-50 | -8.615850e-47 |
Msa0054880 | Msa1331120 | 0.805534 | 1.274291e-49 | -8.615850e-47 |
Msa0702590 | Msa1331120 | 0.807054 | 6.096870e-50 | -8.615850e-47 |
Msa1224840 | Msa1331120 | 0.803915 | 2.775267e-49 | -8.615850e-47 |
Msa1234710 | Msa1331120 | 0.806987 | 6.298413e-50 | -8.615850e-47 |
Msa1300250 | Msa1331120 | 0.838258 | 3.199939e-57 | -8.615850e-47 |
Msa1331120 | Msa1331160 | 0.859441 | 4.127994e-63 | -8.615850e-47 |
Msa1331120 | Msa1427290 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
Msa1331120 | Msa1459460 | 0.806236 | 9.071574e-50 | -8.615850e-47 |
Msa0298500 | Msa1331120 | 0.810668 | 1.028192e-50 | -8.615850e-47 |
Msa0307570 | Msa1331120 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
Msa0336390 | Msa1331120 | 0.803290 | 3.741252e-49 | -8.615850e-47 |
Msa1212890 | Msa1331120 | 0.862539 | 4.717549e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1331120 | MtrunA17_Chr4g0061781 | 97.885 | 520 | 8 | 2 | 1 | 519 | 1 | 518 | 0.0 | 1052 |
Msa1331120 | MtrunA17_Chr2g0307971 | 79.961 | 519 | 91 | 4 | 3 | 519 | 12 | 519 | 0.0 | 848 |
Msa1331120 | MtrunA17_Chr6g0455571 | 77.637 | 474 | 101 | 2 | 42 | 515 | 45 | 513 | 0.0 | 776 |
Msa1331120 | MtrunA17_Chr5g0417871 | 60.805 | 472 | 177 | 5 | 42 | 509 | 9 | 476 | 0.0 | 598 |
Msa1331120 | MtrunA17_Chr4g0042711 | 60.510 | 471 | 177 | 4 | 40 | 509 | 26 | 488 | 0.0 | 595 |
Msa1331120 | MtrunA17_Chr4g0070551 | 48.601 | 393 | 193 | 5 | 114 | 505 | 227 | 611 | 5.46e-129 | 389 |
Msa1331120 | MtrunA17_Chr5g0426591 | 48.515 | 404 | 197 | 5 | 114 | 509 | 110 | 510 | 2.02e-128 | 384 |
Msa1331120 | MtrunA17_Chr4g0008451 | 49.109 | 393 | 191 | 5 | 114 | 505 | 231 | 615 | 1.09e-126 | 384 |
Msa1331120 | MtrunA17_Chr5g0436321 | 46.929 | 407 | 204 | 7 | 116 | 518 | 162 | 560 | 3.18e-125 | 377 |
Msa1331120 | MtrunA17_Chr3g0132371 | 48.889 | 405 | 189 | 7 | 115 | 509 | 141 | 537 | 2.81e-121 | 367 |
Msa1331120 | MtrunA17_Chr3g0129981 | 44.941 | 425 | 214 | 9 | 105 | 516 | 100 | 517 | 1.08e-114 | 349 |
Msa1331120 | MtrunA17_Chr5g0399311 | 42.184 | 403 | 217 | 9 | 108 | 509 | 117 | 504 | 1.12e-92 | 292 |
Msa1331120 | MtrunA17_Chr4g0056061 | 41.363 | 411 | 227 | 8 | 108 | 517 | 101 | 498 | 1.59e-91 | 290 |
Msa1331120 | MtrunA17_Chr3g0143821 | 42.317 | 397 | 213 | 8 | 114 | 509 | 110 | 491 | 3.24e-91 | 290 |
Msa1331120 | MtrunA17_Chr5g0448581 | 38.739 | 444 | 235 | 10 | 68 | 509 | 90 | 498 | 3.46e-88 | 282 |
Msa1331120 | MtrunA17_Chr1g0204121 | 40.000 | 420 | 210 | 13 | 104 | 509 | 82 | 473 | 2.88e-83 | 267 |
Msa1331120 | MtrunA17_Chr5g0412251 | 34.728 | 478 | 242 | 13 | 64 | 506 | 56 | 498 | 1.46e-81 | 263 |
Msa1331120 | MtrunA17_Chr3g0132951 | 34.526 | 475 | 239 | 11 | 68 | 506 | 74 | 512 | 5.36e-81 | 261 |
Msa1331120 | MtrunA17_Chr1g0160781 | 36.451 | 417 | 233 | 11 | 114 | 513 | 148 | 549 | 1.07e-78 | 256 |
Msa1331120 | MtrunA17_Chr4g0043911 | 36.691 | 417 | 232 | 11 | 114 | 513 | 149 | 550 | 4.87e-78 | 255 |
Msa1331120 | MtrunA17_Chr3g0123521 | 36.573 | 391 | 222 | 8 | 114 | 487 | 149 | 530 | 5.57e-78 | 254 |
Msa1331120 | MtrunA17_Chr5g0424241 | 38.571 | 420 | 221 | 13 | 116 | 512 | 158 | 563 | 6.70e-78 | 255 |
Msa1331120 | MtrunA17_Chr3g0077321 | 36.215 | 428 | 241 | 11 | 106 | 514 | 138 | 552 | 6.89e-77 | 252 |
Msa1331120 | MtrunA17_Chr1g0204141 | 37.204 | 422 | 222 | 13 | 104 | 509 | 82 | 476 | 5.71e-75 | 246 |
Msa1331120 | MtrunA17_Chr2g0284071 | 36.919 | 409 | 212 | 12 | 109 | 476 | 209 | 612 | 5.07e-72 | 241 |
Msa1331120 | MtrunA17_Chr3g0087291 | 36.883 | 385 | 224 | 9 | 110 | 488 | 167 | 538 | 1.46e-68 | 230 |
Msa1331120 | MtrunA17_Chr4g0075311 | 35.000 | 440 | 228 | 11 | 115 | 509 | 164 | 590 | 1.58e-65 | 223 |
Msa1331120 | MtrunA17_Chr4g0010511 | 37.433 | 374 | 220 | 7 | 118 | 488 | 236 | 598 | 1.38e-64 | 221 |
Msa1331120 | MtrunA17_Chr4g0003561 | 35.393 | 356 | 197 | 10 | 114 | 459 | 74 | 406 | 4.25e-56 | 194 |
Msa1331120 | MtrunA17_Chr7g0240241 | 58.871 | 124 | 47 | 1 | 277 | 396 | 1 | 124 | 9.44e-45 | 154 |
Msa1331120 | MtrunA17_Chr1g0146501 | 37.956 | 274 | 152 | 9 | 114 | 373 | 89 | 358 | 6.77e-41 | 156 |
Msa1331120 | MtrunA17_Chr3g0127811 | 33.431 | 341 | 183 | 12 | 46 | 373 | 9 | 318 | 6.47e-40 | 150 |
Msa1331120 | MtrunA17_Chr7g0220381 | 31.000 | 300 | 185 | 8 | 114 | 397 | 97 | 390 | 2.50e-37 | 145 |
Msa1331120 | MtrunA17_Chr1g0172911 | 39.881 | 168 | 45 | 3 | 112 | 279 | 18 | 129 | 8.22e-24 | 97.1 |
Msa1331120 | MtrunA17_Chr2g0298881 | 23.925 | 372 | 220 | 13 | 93 | 447 | 10 | 335 | 4.90e-18 | 85.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1331120 | AT5G15740.1 | 72.746 | 477 | 121 | 3 | 35 | 510 | 31 | 499 | 0.0 | 742 |
Msa1331120 | AT3G02250.1 | 72.881 | 472 | 119 | 3 | 40 | 510 | 36 | 499 | 0.0 | 728 |
Msa1331120 | AT1G14020.1 | 59.915 | 469 | 174 | 4 | 42 | 509 | 27 | 482 | 0.0 | 597 |
Msa1331120 | AT2G03280.1 | 56.992 | 472 | 182 | 7 | 40 | 509 | 28 | 480 | 0.0 | 557 |
Msa1331120 | AT2G03280.2 | 53.908 | 499 | 182 | 8 | 40 | 509 | 28 | 507 | 0.0 | 543 |
Msa1331120 | AT2G37980.1 | 50.251 | 398 | 188 | 7 | 114 | 509 | 225 | 614 | 1.05e-130 | 394 |
Msa1331120 | AT5G01100.1 | 48.635 | 403 | 185 | 7 | 112 | 505 | 213 | 602 | 2.14e-126 | 383 |
Msa1331120 | AT3G54100.1 | 47.739 | 398 | 198 | 7 | 114 | 509 | 221 | 610 | 1.16e-123 | 376 |
Msa1331120 | AT1G22460.1 | 45.823 | 419 | 205 | 7 | 105 | 509 | 146 | 556 | 7.45e-123 | 372 |
Msa1331120 | AT5G35570.1 | 47.570 | 391 | 196 | 6 | 116 | 505 | 252 | 634 | 1.49e-122 | 374 |
Msa1331120 | AT5G64600.1 | 44.028 | 427 | 216 | 9 | 102 | 514 | 101 | 518 | 2.37e-113 | 346 |
Msa1331120 | AT4G38390.1 | 42.065 | 397 | 215 | 8 | 114 | 509 | 122 | 504 | 5.26e-94 | 296 |
Msa1331120 | AT1G76270.1 | 42.537 | 402 | 212 | 8 | 110 | 509 | 101 | 485 | 1.68e-92 | 293 |
Msa1331120 | AT1G20550.1 | 40.580 | 414 | 213 | 10 | 110 | 514 | 104 | 493 | 3.72e-92 | 292 |
Msa1331120 | AT4G16650.2 | 42.079 | 404 | 218 | 9 | 107 | 509 | 114 | 502 | 2.87e-86 | 276 |
Msa1331120 | AT4G16650.1 | 42.079 | 404 | 218 | 9 | 107 | 509 | 114 | 502 | 2.87e-86 | 276 |
Msa1331120 | AT4G24530.1 | 35.232 | 474 | 237 | 10 | 68 | 506 | 75 | 513 | 1.39e-83 | 268 |
Msa1331120 | AT1G04910.1 | 39.663 | 416 | 230 | 10 | 108 | 518 | 83 | 482 | 5.04e-82 | 265 |
Msa1331120 | AT1G38065.2 | 37.931 | 377 | 209 | 10 | 115 | 475 | 26 | 393 | 2.33e-80 | 258 |
Msa1331120 | AT1G38065.1 | 37.931 | 377 | 209 | 10 | 115 | 475 | 36 | 403 | 3.85e-80 | 258 |
Msa1331120 | AT5G65470.1 | 34.664 | 476 | 239 | 12 | 68 | 506 | 59 | 499 | 7.99e-80 | 258 |
Msa1331120 | AT3G26370.1 | 36.181 | 398 | 226 | 9 | 107 | 487 | 152 | 538 | 2.69e-79 | 258 |
Msa1331120 | AT1G38131.1 | 37.931 | 377 | 209 | 10 | 115 | 475 | 155 | 522 | 4.32e-79 | 259 |
Msa1331120 | AT1G35510.1 | 36.129 | 465 | 237 | 15 | 68 | 511 | 134 | 559 | 4.11e-77 | 253 |
Msa1331120 | AT2G01480.1 | 35.012 | 417 | 239 | 11 | 114 | 513 | 153 | 554 | 1.54e-74 | 246 |
Msa1331120 | AT2G01480.2 | 36.712 | 365 | 211 | 7 | 114 | 463 | 153 | 512 | 3.49e-74 | 244 |
Msa1331120 | AT1G11990.1 | 38.049 | 410 | 225 | 12 | 116 | 509 | 191 | 587 | 8.27e-74 | 245 |
Msa1331120 | AT5G63390.1 | 37.766 | 376 | 217 | 7 | 118 | 488 | 167 | 530 | 9.61e-74 | 244 |
Msa1331120 | AT1G14970.3 | 35.958 | 381 | 221 | 8 | 115 | 480 | 9 | 381 | 1.12e-73 | 239 |
Msa1331120 | AT1G14970.2 | 35.958 | 381 | 221 | 8 | 115 | 480 | 35 | 407 | 1.72e-73 | 240 |
Msa1331120 | AT1G14970.1 | 35.958 | 381 | 221 | 8 | 115 | 480 | 155 | 527 | 3.73e-72 | 240 |
Msa1331120 | AT1G62330.1 | 34.545 | 440 | 229 | 11 | 116 | 509 | 222 | 648 | 4.53e-72 | 242 |
Msa1331120 | AT1G11990.2 | 34.899 | 447 | 225 | 12 | 116 | 509 | 176 | 609 | 2.32e-68 | 231 |
Msa1331120 | AT2G44500.1 | 36.508 | 378 | 221 | 7 | 118 | 489 | 180 | 544 | 1.05e-67 | 228 |
Msa1331120 | AT1G29200.4 | 35.961 | 406 | 206 | 9 | 115 | 476 | 70 | 465 | 6.63e-67 | 224 |
Msa1331120 | AT1G29200.1 | 35.961 | 406 | 206 | 9 | 115 | 476 | 70 | 465 | 6.63e-67 | 224 |
Msa1331120 | AT1G29200.2 | 35.961 | 406 | 206 | 9 | 115 | 476 | 186 | 581 | 7.53e-66 | 224 |
Msa1331120 | AT1G29200.3 | 35.661 | 401 | 204 | 9 | 120 | 476 | 1 | 391 | 2.62e-64 | 215 |
Msa1331120 | AT3G07900.1 | 34.646 | 381 | 224 | 6 | 118 | 489 | 191 | 555 | 1.38e-63 | 218 |
Msa1331120 | AT1G52630.1 | 35.655 | 359 | 200 | 11 | 114 | 464 | 73 | 408 | 9.69e-56 | 193 |
Msa1331120 | AT1G52630.2 | 34.125 | 337 | 193 | 10 | 136 | 464 | 5 | 320 | 4.17e-48 | 170 |
Msa1331120 | AT3G03810.2 | 32.895 | 304 | 184 | 7 | 109 | 397 | 83 | 381 | 1.70e-44 | 167 |
Msa1331120 | AT3G03810.1 | 32.895 | 304 | 184 | 7 | 109 | 397 | 83 | 381 | 1.70e-44 | 167 |
Msa1331120 | AT3G26370.2 | 38.235 | 204 | 111 | 5 | 107 | 301 | 152 | 349 | 2.31e-39 | 147 |
Msa1331120 | AT3G30300.2 | 31.879 | 298 | 182 | 8 | 108 | 391 | 96 | 386 | 7.78e-37 | 145 |
Msa1331120 | AT3G30300.1 | 31.879 | 298 | 182 | 8 | 108 | 391 | 96 | 386 | 7.78e-37 | 145 |
Msa1331120 | AT2G44500.2 | 37.288 | 236 | 132 | 6 | 118 | 347 | 180 | 405 | 7.98e-35 | 135 |
Msa1331120 | AT1G51630.1 | 24.926 | 337 | 202 | 14 | 115 | 441 | 91 | 386 | 2.57e-15 | 78.6 |
Msa1331120 | AT3G21190.1 | 23.631 | 347 | 214 | 13 | 105 | 441 | 80 | 385 | 5.99e-15 | 77.4 |
Find 188 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTATAAAGTTTACCAATTT+TGG | 0.010006 | 8_4:+50527011 | None:intergenic |
TAACTTCACTCTTTGGAATT+TGG | 0.117923 | 8_4:+50529562 | None:intergenic |
CTTTAATTAAATCTACATTT+AGG | 0.125271 | 8_4:-50529110 | Msa1331120:five_prime_UTR |
TTCATATTCATATACAAATT+TGG | 0.156437 | 8_4:-50525839 | Msa1331120:three_prime_UTR |
CATTTCTGGTCCTTCATCTT+AGG | 0.184507 | 8_4:-50527436 | Msa1331120:CDS |
CATATACAAATTTGGATTAC+TGG | 0.218193 | 8_4:-50525831 | Msa1331120:three_prime_UTR |
CTGCGATGCAGAGTTAATTT+TGG | 0.222827 | 8_4:-50527530 | Msa1331120:CDS |
CTAGCTTCGGGTTCGGGTTT+AGG | 0.230091 | 8_4:-50528988 | Msa1331120:CDS |
ATAGAAATAATCCTCTTCTT+TGG | 0.235561 | 8_4:+50526276 | None:intergenic |
TTTAATTAAATCTACATTTA+GGG | 0.261089 | 8_4:-50529109 | Msa1331120:five_prime_UTR |
CTCTGGAGGTTGGCCGTTAT+TGG | 0.266699 | 8_4:+50527562 | None:intergenic |
TAACTACAAGTGGCAAGATT+TGG | 0.276036 | 8_4:-50529043 | Msa1331120:CDS |
CATTGCTTATACAGATATCT+TGG | 0.286701 | 8_4:-50526460 | Msa1331120:intron |
CCATGGTTAACTTCACTCTT+TGG | 0.290644 | 8_4:+50529555 | None:intergenic |
AACTTGATAAAACATCCTTT+TGG | 0.293087 | 8_4:-50528063 | Msa1331120:CDS |
GTGGGGTCCTCGAGTTCTTA+AGG | 0.294055 | 8_4:-50528863 | Msa1331120:CDS |
GAGAGACTAGCTTCGGGTTC+GGG | 0.295532 | 8_4:-50528994 | Msa1331120:CDS |
CCTTCACAGCTGAAGAAAAT+TGG | 0.303272 | 8_4:+50526356 | None:intergenic |
AAGCGTGACATTTAAATATC+TGG | 0.308808 | 8_4:+50528096 | None:intergenic |
TAGAAATAATCCTCTTCTTT+GGG | 0.308913 | 8_4:+50526277 | None:intergenic |
TCCTCTTCTTTGGGCTTGTC+AGG | 0.310596 | 8_4:+50526286 | None:intergenic |
TTCAAAGGAGTACCCAAAAT+TGG | 0.312076 | 8_4:-50527024 | Msa1331120:intron |
AGGTGAAGTGTGAGAGAAAA+TGG | 0.325545 | 8_4:+50529360 | None:intergenic |
TCGGGTTTAGGTTCGGGTTC+AGG | 0.327831 | 8_4:-50528976 | Msa1331120:CDS |
TTCGGGTTCGGGTTTAGGTT+CGG | 0.328399 | 8_4:-50528983 | Msa1331120:CDS |
ACAATAACGGTGCACTGAAC+TGG | 0.336008 | 8_4:-50526381 | Msa1331120:CDS |
GAGCATCCGTTCTATTTAGA+TGG | 0.341371 | 8_4:+50527591 | None:intergenic |
GTTAGCAAGGTTGTAGGTAT+AGG | 0.342764 | 8_4:-50529528 | Msa1331120:five_prime_UTR |
TCGGGTTCGGGTTTAGGTTC+GGG | 0.348733 | 8_4:-50528982 | Msa1331120:CDS |
TGGGGTCCTCGAGTTCTTAA+GGG | 0.351334 | 8_4:-50528862 | Msa1331120:CDS |
TCCCACATATGATGGAAATA+TGG | 0.356947 | 8_4:-50526795 | Msa1331120:CDS |
CTACTCAGCATATCATTTGA+TGG | 0.359944 | 8_4:+50526229 | None:intergenic |
GAAAGGTGATCAAGCTTCTA+AGG | 0.362439 | 8_4:-50527469 | Msa1331120:CDS |
ATTGCAGCCGGTGAAATATA+TGG | 0.367188 | 8_4:-50527071 | Msa1331120:CDS |
AACTACAAGTGGCAAGATTT+GGG | 0.370307 | 8_4:-50529042 | Msa1331120:CDS |
GCATGGGTAACCCTAGTAAA+AGG | 0.373604 | 8_4:-50526318 | Msa1331120:CDS |
GCAGTCTCCTCGGGTGTTAG+AGG | 0.386334 | 8_4:+50527140 | None:intergenic |
CTTCTTCCTTCTTCGCTCTC+CGG | 0.393711 | 8_4:-50529409 | Msa1331120:five_prime_UTR |
TGCACTCACCCTGCAATGTC+AGG | 0.395485 | 8_4:+50525889 | None:intergenic |
AGAGAGACTAGCTTCGGGTT+CGG | 0.397228 | 8_4:-50528995 | Msa1331120:CDS |
GATGGTTCTAAACATTCCTC+TGG | 0.405353 | 8_4:+50526247 | None:intergenic |
TTAAACTATAGAACGAGTTA+AGG | 0.407474 | 8_4:-50529594 | Msa1331120:five_prime_UTR |
CTAAGATGAAGGACCAGAAA+TGG | 0.413370 | 8_4:+50527437 | None:intergenic |
GGGAAATGTTGTTGAATTTG+AGG | 0.413426 | 8_4:+50529331 | None:intergenic |
TTCATCTCAGATGGCAGCAT+TGG | 0.420480 | 8_4:-50526852 | Msa1331120:CDS |
CATCGCAGCTTCTGAATCTC+TGG | 0.422154 | 8_4:+50527545 | None:intergenic |
TAACTCTTGGGAGGAAGAAC+TGG | 0.422934 | 8_4:+50528757 | None:intergenic |
AGTAGCCACCCTGACATTGC+AGG | 0.431352 | 8_4:-50525898 | Msa1331120:three_prime_UTR |
GGCCATATTTCCATCATATG+TGG | 0.431890 | 8_4:+50526793 | None:intergenic |
ATAGTTCAATTAACAGCTAT+AGG | 0.432577 | 8_4:-50528892 | Msa1331120:CDS |
TGTCAAGAGCCCTTAGTGTA+AGG | 0.436508 | 8_4:+50527117 | None:intergenic |
CACTTCTCAGATAGAGGAGT+TGG | 0.437132 | 8_4:-50527495 | Msa1331120:CDS |
ATTGCTTATACAGATATCTT+GGG | 0.438384 | 8_4:-50526459 | Msa1331120:intron |
AAATAGAACGGATGCTCGGC+TGG | 0.442470 | 8_4:-50527585 | Msa1331120:CDS |
TAAACTATAGAACGAGTTAA+GGG | 0.444344 | 8_4:-50529593 | Msa1331120:five_prime_UTR |
GTGGCAAGATTTGGGTTGGA+TGG | 0.446241 | 8_4:-50529034 | Msa1331120:CDS |
ACTGTATTTCTTGTCTGCAT+TGG | 0.449364 | 8_4:-50529214 | Msa1331120:five_prime_UTR |
GCGGTGGCCCGCAACTACTT+TGG | 0.453403 | 8_4:+50526772 | None:intergenic |
GGTTAGGTTAGCAAGGTTGT+AGG | 0.453647 | 8_4:-50529534 | Msa1331120:five_prime_UTR |
AACAGCTATAGGTGATTTGT+GGG | 0.454993 | 8_4:-50528881 | Msa1331120:CDS |
TGCTTCAAATTCTAGAGCGT+TGG | 0.455802 | 8_4:-50528806 | Msa1331120:CDS |
TAGTGTAAGGGCAGTCTCCT+CGG | 0.458304 | 8_4:+50527130 | None:intergenic |
AGTGTAAGGGCAGTCTCCTC+GGG | 0.459191 | 8_4:+50527131 | None:intergenic |
GAGTGAAGTTAACCATGGTT+AGG | 0.461961 | 8_4:-50529550 | Msa1331120:five_prime_UTR |
TTTGGGTTGGATGGGTTTGA+AGG | 0.463262 | 8_4:-50529025 | Msa1331120:CDS |
TAACAGCTATAGGTGATTTG+TGG | 0.466819 | 8_4:-50528882 | Msa1331120:CDS |
TACTTGATGGTTTCGTGCAA+TGG | 0.469164 | 8_4:-50528523 | Msa1331120:CDS |
ACACTATGCCACCCGTTAGT+TGG | 0.471268 | 8_4:-50527792 | Msa1331120:CDS |
TTAGGTTCGGGTTCAGGAAG+AGG | 0.473618 | 8_4:-50528970 | Msa1331120:CDS |
TTCTAAACATTCCTCTGGGT+TGG | 0.473630 | 8_4:+50526252 | None:intergenic |
GATCCACATCAAATATGTCT+TGG | 0.475690 | 8_4:+50527902 | None:intergenic |
GATAGAGGAGTTGGGCAGAA+AGG | 0.478505 | 8_4:-50527486 | Msa1331120:CDS |
TTCTCCACCATATATTTCAC+CGG | 0.478724 | 8_4:+50527064 | None:intergenic |
GAGATTCACTTCTCAGATAG+AGG | 0.481620 | 8_4:-50527501 | Msa1331120:CDS |
AGAGAAAATGGAAGGTGCTC+CGG | 0.489352 | 8_4:+50529372 | None:intergenic |
TGGCAAGATTTGGGTTGGAT+GGG | 0.493030 | 8_4:-50529033 | Msa1331120:CDS |
GCCATATTTCCATCATATGT+GGG | 0.493891 | 8_4:+50526794 | None:intergenic |
TCCTAGACTCAAGCTGAAAG+TGG | 0.496928 | 8_4:-50527830 | Msa1331120:CDS |
TGGTGGCCGGAGAGCGAAGA+AGG | 0.499510 | 8_4:+50529403 | None:intergenic |
GATGCTCGGCTGGCCAATAA+CGG | 0.501292 | 8_4:-50527575 | Msa1331120:CDS |
AATATGGCCAAAGTAGTTGC+GGG | 0.503736 | 8_4:-50526779 | Msa1331120:CDS |
GCAGATATGCCTATCCTTGG+TGG | 0.504562 | 8_4:-50527211 | Msa1331120:intron |
TCACCTAGGATCAGCCCAAA+AGG | 0.506855 | 8_4:+50528048 | None:intergenic |
ATTACTGGATCTGCAGTTTG+TGG | 0.507334 | 8_4:-50525816 | Msa1331120:three_prime_UTR |
TCAAATGAGAGCAGCGGTGG+TGG | 0.507654 | 8_4:-50528491 | Msa1331120:intron |
ATGGTTCTAAACATTCCTCT+GGG | 0.512898 | 8_4:+50526248 | None:intergenic |
TCAAAATCATTCATCTCAGA+TGG | 0.513509 | 8_4:-50526861 | Msa1331120:CDS |
CAATAACGGTGCACTGAACT+GGG | 0.514418 | 8_4:-50526380 | Msa1331120:CDS |
AGGAGACTGCCCTTACACTA+AGG | 0.518063 | 8_4:-50527127 | Msa1331120:CDS |
GTCCTCGAGTTCTTAAGGGT+TGG | 0.518145 | 8_4:-50528858 | Msa1331120:CDS |
GATATGTCGGACCAACTAAC+GGG | 0.522657 | 8_4:+50527781 | None:intergenic |
TAGCACGTGACAAATGTGTT+TGG | 0.523017 | 8_4:-50526209 | Msa1331120:exon |
ACAAGTGGCAAGATTTGGGT+TGG | 0.524017 | 8_4:-50529038 | Msa1331120:CDS |
CAACTACAACGGTGATATTG+TGG | 0.525187 | 8_4:-50528921 | Msa1331120:CDS |
TCTAATCAAGCAAAAGCAGC+CGG | 0.526158 | 8_4:-50526021 | Msa1331120:three_prime_UTR |
TGTTGAATTTGAGGAAATGA+AGG | 0.526671 | 8_4:+50529340 | None:intergenic |
CTAATCAAGCAAAAGCAGCC+GGG | 0.527698 | 8_4:-50526020 | Msa1331120:three_prime_UTR |
TTGGCAGATATGCCTATCCT+TGG | 0.528212 | 8_4:-50527214 | Msa1331120:intron |
CCATCTCATACCTAAGATGA+AGG | 0.530904 | 8_4:+50527426 | None:intergenic |
TTTCTCTTTCCACCAAGGAT+AGG | 0.532477 | 8_4:+50527202 | None:intergenic |
AAGTAGTTGCGGGCCACCGC+AGG | 0.534311 | 8_4:-50526769 | Msa1331120:intron |
GGTAGAAAACCAAGTGTACC+AGG | 0.535579 | 8_4:+50526156 | None:intergenic |
TCTTTCCTCACCACCTCCAT+CGG | 0.538194 | 8_4:-50529454 | Msa1331120:five_prime_UTR |
GCTTCTGAATCTCTGGAGGT+TGG | 0.538969 | 8_4:+50527552 | None:intergenic |
ACTTCTCAGATAGAGGAGTT+GGG | 0.542802 | 8_4:-50527494 | Msa1331120:CDS |
TCCACTTTCAGCTTGAGTCT+AGG | 0.545468 | 8_4:+50527829 | None:intergenic |
GTACCATCTCCTGGTACACT+TGG | 0.549848 | 8_4:-50526165 | Msa1331120:three_prime_UTR |
TCCGACTTGAAAAGAAGAGA+TGG | 0.552608 | 8_4:-50527170 | Msa1331120:CDS |
CCTTCATCTTAGGTATGAGA+TGG | 0.553344 | 8_4:-50527426 | Msa1331120:CDS |
ACATAGAGAAAAGGTGGAGT+GGG | 0.554622 | 8_4:-50526061 | Msa1331120:three_prime_UTR |
TAACCATGGTTAGGTTAGCA+AGG | 0.555353 | 8_4:-50529541 | Msa1331120:five_prime_UTR |
TTTGTGGAAGCTTAAACCAC+TGG | 0.555485 | 8_4:-50525800 | Msa1331120:three_prime_UTR |
AAGAGGCAGACATAGAGAAA+AGG | 0.556274 | 8_4:-50526070 | Msa1331120:three_prime_UTR |
TTAATAGATCAGTACAATAA+CGG | 0.557119 | 8_4:-50526394 | Msa1331120:CDS |
ATCTAAATAGAACGGATGCT+CGG | 0.559630 | 8_4:-50527589 | Msa1331120:CDS |
TCCTGACAAGCCCAAAGAAG+AGG | 0.560213 | 8_4:-50526287 | Msa1331120:CDS |
TAACGGGTGGCATAGTGTAA+AGG | 0.560749 | 8_4:+50527797 | None:intergenic |
ATTCCAAGACATATTTGATG+TGG | 0.563275 | 8_4:-50527905 | Msa1331120:CDS |
TGAAAGAAACGAAGATCGGA+TGG | 0.564064 | 8_4:+50526881 | None:intergenic |
AATATTATAGCCGATGGAGG+TGG | 0.565451 | 8_4:+50529444 | None:intergenic |
GGTCAGGAAGGAAACACTGT+TGG | 0.565664 | 8_4:-50526906 | Msa1331120:CDS |
GACATTTAAATATCTGGCAA+TGG | 0.566411 | 8_4:+50528102 | None:intergenic |
TCCGGCCACCACATTCTCGC+CGG | 0.567955 | 8_4:-50529391 | Msa1331120:five_prime_UTR |
TGGAAGAGTTGACAAGAATG+AGG | 0.569684 | 8_4:-50527355 | Msa1331120:intron |
TGAATGAATATTATAGCCGA+TGG | 0.570106 | 8_4:+50529438 | None:intergenic |
GTTGTTGAAACAGGTCAGGA+AGG | 0.574070 | 8_4:-50526918 | Msa1331120:intron |
TCCGGCGAGAATGTGGTGGC+CGG | 0.576218 | 8_4:+50529390 | None:intergenic |
TATCACATCCTTGAGAGATG+AGG | 0.579093 | 8_4:-50527875 | Msa1331120:CDS |
GTAAAAGCAATAACTACAAG+TGG | 0.579123 | 8_4:-50529053 | Msa1331120:CDS |
TTGATGGTTTCGTGCAATGG+AGG | 0.581174 | 8_4:-50528520 | Msa1331120:CDS |
AAGACGGACAAGTCTTTCAA+AGG | 0.582155 | 8_4:-50527039 | Msa1331120:CDS |
GTCAAGAGCCCTTAGTGTAA+GGG | 0.585333 | 8_4:+50527118 | None:intergenic |
CGCAGCTTCTGAATCTCTGG+AGG | 0.585943 | 8_4:+50527548 | None:intergenic |
AGGCAGACATAGAGAAAAGG+TGG | 0.587640 | 8_4:-50526067 | Msa1331120:three_prime_UTR |
AAATATGGCCAAAGTAGTTG+CGG | 0.588468 | 8_4:-50526780 | Msa1331120:CDS |
GGAGACTGCCCTTACACTAA+GGG | 0.590801 | 8_4:-50527126 | Msa1331120:CDS |
ATTCAAATCTACATTGCAGC+CGG | 0.591935 | 8_4:-50527083 | Msa1331120:CDS |
AGATATGTCGGACCAACTAA+CGG | 0.593775 | 8_4:+50527780 | None:intergenic |
ACTTTCAGCTTGAGTCTAGG+AGG | 0.594125 | 8_4:+50527832 | None:intergenic |
TAATCAAGCAAAAGCAGCCG+GGG | 0.595445 | 8_4:-50526019 | Msa1331120:three_prime_UTR |
GTTCTTATAGTAAGATATGT+CGG | 0.596661 | 8_4:+50527768 | None:intergenic |
GGAATCGCATGCTCATCGCA+TGG | 0.597419 | 8_4:-50526335 | Msa1331120:CDS |
GAATCGCATGCTCATCGCAT+GGG | 0.597465 | 8_4:-50526334 | Msa1331120:CDS |
TATCCGCACCTCATCTCTCA+AGG | 0.599568 | 8_4:+50527867 | None:intergenic |
GGGTAACCCTAGTAAAAGGT+TGG | 0.602245 | 8_4:-50526314 | Msa1331120:CDS |
AAGGTTGTAGGTATAGGTGT+AGG | 0.604783 | 8_4:-50529522 | Msa1331120:five_prime_UTR |
GACATAGAGAAAAGGTGGAG+TGG | 0.608814 | 8_4:-50526062 | Msa1331120:three_prime_UTR |
GCACTCACCCTGCAATGTCA+GGG | 0.610228 | 8_4:+50525890 | None:intergenic |
CTCTTGGGAGGAAGAACTGG+TGG | 0.610292 | 8_4:+50528760 | None:intergenic |
GCTACTATACAAGAATGTGA+TGG | 0.611987 | 8_4:+50525915 | None:intergenic |
CCAAAGAGTGAAGTTAACCA+TGG | 0.612692 | 8_4:-50529555 | Msa1331120:five_prime_UTR |
GAATCAAATGAGAGCAGCGG+TGG | 0.613539 | 8_4:-50528494 | Msa1331120:CDS |
AGTTGTCCATCTAAATAGAA+CGG | 0.613720 | 8_4:-50527597 | Msa1331120:CDS |
AGGTTGTAACAGTGATGAGG+TGG | 0.616448 | 8_4:-50527375 | Msa1331120:CDS |
TATATGGTGGAGAAAGAAGA+CGG | 0.616742 | 8_4:-50527055 | Msa1331120:CDS |
GTTGTTCAACGAAACGACAC+CGG | 0.622229 | 8_4:+50529148 | None:intergenic |
GTGCTCCGGCGAGAATGTGG+TGG | 0.627301 | 8_4:+50529386 | None:intergenic |
AAACCAAGTGTACCAGGAGA+TGG | 0.627844 | 8_4:+50526162 | None:intergenic |
GTAGCCACCCTGACATTGCA+GGG | 0.630817 | 8_4:-50525897 | Msa1331120:three_prime_UTR |
AAACTATAGAACGAGTTAAG+GGG | 0.632455 | 8_4:-50529592 | Msa1331120:five_prime_UTR |
AAAAGGTACTAACTCTTGGG+AGG | 0.632505 | 8_4:+50528748 | None:intergenic |
GAGCTAATTCAATAAATCTG+TGG | 0.633440 | 8_4:+50526135 | None:intergenic |
CATATCTTACTATAAGAACC+AGG | 0.641279 | 8_4:-50527764 | Msa1331120:intron |
GGCCAACCCTTAAGAACTCG+AGG | 0.641899 | 8_4:+50528856 | None:intergenic |
TATAGCCGATGGAGGTGGTG+AGG | 0.645162 | 8_4:+50529449 | None:intergenic |
CAACCTTGCTAACCTAACCA+TGG | 0.651567 | 8_4:+50529538 | None:intergenic |
CTCACCCTGCAATGTCAGGG+TGG | 0.653884 | 8_4:+50525893 | None:intergenic |
AAGGTGCTCCGGCGAGAATG+TGG | 0.657081 | 8_4:+50529383 | None:intergenic |
ATGAATATTATAGCCGATGG+AGG | 0.657327 | 8_4:+50529441 | None:intergenic |
TCAAGGTTGTAACAGTGATG+AGG | 0.671497 | 8_4:-50527378 | Msa1331120:CDS |
CTCAAGCTGAAAGTGGAACG+TGG | 0.673837 | 8_4:-50527823 | Msa1331120:CDS |
AGTTTAAACATCATTGTACA+CGG | 0.681628 | 8_4:-50525867 | Msa1331120:three_prime_UTR |
CATCCTTGAGAGATGAGGTG+CGG | 0.682250 | 8_4:-50527870 | Msa1331120:CDS |
GAAGTGTGAGAGAAAATGGA+AGG | 0.684028 | 8_4:+50529364 | None:intergenic |
ATTGAATCAAATGAGAGCAG+CGG | 0.686905 | 8_4:-50528497 | Msa1331120:CDS |
GCAGCCGGTGAAATATATGG+TGG | 0.693718 | 8_4:-50527068 | Msa1331120:CDS |
GAAGAGGTAGAATGAAACTG+TGG | 0.693779 | 8_4:-50528954 | Msa1331120:CDS |
ATGTCGGACCAACTAACGGG+TGG | 0.696538 | 8_4:+50527784 | None:intergenic |
TAGCTGAACTGTACCTGCGG+TGG | 0.699212 | 8_4:+50526756 | None:intergenic |
TTATTTCTATTCCAACCCAG+AGG | 0.699845 | 8_4:-50526263 | Msa1331120:CDS |
GGTGTCGTTTCGTTGAACAA+CGG | 0.700816 | 8_4:-50529146 | Msa1331120:five_prime_UTR |
AATCAAGCAAAAGCAGCCGG+GGG | 0.715141 | 8_4:-50526018 | Msa1331120:three_prime_UTR |
AACTGTGCAGATATGTGACA+TGG | 0.717484 | 8_4:-50528128 | Msa1331120:intron |
TCCACATGTGTAAAACACGA+AGG | 0.718734 | 8_4:+50528835 | None:intergenic |
TTTATGTCCTCTAACACCCG+AGG | 0.720237 | 8_4:-50527147 | Msa1331120:CDS |
GATGATACGTGCAACTACAA+CGG | 0.721489 | 8_4:-50528932 | Msa1331120:CDS |
ACAGCTATAGGTGATTTGTG+GGG | 0.725015 | 8_4:-50528880 | Msa1331120:CDS |
TTAAACATCATTGTACACGG+AGG | 0.789433 | 8_4:-50525864 | Msa1331120:three_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAATTAAATCTACATTTA+GGG | - | chr8_4:50526259-50526278 | Msa1331120:CDS | 10.0% |
!! | ATAATAATCATAATTAAACA+AGG | + | chr8_4:50526756-50526775 | None:intergenic | 10.0% |
!! | TGATTGAAAAAATAAATAAT+TGG | + | chr8_4:50528076-50528095 | None:intergenic | 10.0% |
!! | CTTTAATTAAATCTACATTT+AGG | - | chr8_4:50526258-50526277 | Msa1331120:CDS | 15.0% |
!! | ACTTAATTAGAAAGTAAAAA+AGG | + | chr8_4:50526640-50526659 | None:intergenic | 15.0% |
!! | AAATAGCAATAAAACAAATT+AGG | + | chr8_4:50526675-50526694 | None:intergenic | 15.0% |
!!! | ATTTGCTTTTATTAAGATAT+TGG | + | chr8_4:50528727-50528746 | None:intergenic | 15.0% |
!! | TTCATATTCATATACAAATT+TGG | - | chr8_4:50529529-50529548 | Msa1331120:five_prime_UTR | 15.0% |
!!! | GTTATTTTTTATATTGAGGA+GGG | + | chr8_4:50526060-50526079 | None:intergenic | 20.0% |
!!! | CATTTGTTTTTAATTAGCAA+AGG | + | chr8_4:50527707-50527726 | None:intergenic | 20.0% |
!! | CTTTGCTAATTAAAAACAAA+TGG | - | chr8_4:50527705-50527724 | Msa1331120:intron | 20.0% |
!!! | AATAATTGGACTTTTGAAAT+AGG | + | chr8_4:50528062-50528081 | None:intergenic | 20.0% |
!!! | ATTTATTTTTTCAATCACTG+TGG | - | chr8_4:50528079-50528098 | Msa1331120:CDS | 20.0% |
!!! | AAATTTCAATTTTTTGTGCT+TGG | - | chr8_4:50528135-50528154 | Msa1331120:intron | 20.0% |
!!! | CTATAAAGTTTACCAATTTT+GGG | + | chr8_4:50528359-50528378 | None:intergenic | 20.0% |
!! | AAACTTTATAGCTAAACTAA+AGG | - | chr8_4:50528368-50528387 | Msa1331120:intron | 20.0% |
!!! | AATTTGGAATTTTGTTTATC+TGG | + | chr8_4:50528687-50528706 | None:intergenic | 20.0% |
!!! | GTTATAGTGTTATTATTAGT+TGG | - | chr8_4:50528852-50528871 | Msa1331120:CDS | 20.0% |
!! | TTAATAGATCAGTACAATAA+CGG | - | chr8_4:50528974-50528993 | Msa1331120:CDS | 20.0% |
!! | AAATGTGTTTGGAAAAATAA+TGG | - | chr8_4:50529170-50529189 | Msa1331120:five_prime_UTR | 20.0% |
!! | AGAAAAAAAAATAATACCAG+TGG | + | chr8_4:50529587-50529606 | None:intergenic | 20.0% |
! | TTAAACTATAGAACGAGTTA+AGG | - | chr8_4:50525774-50525793 | Msa1331120:three_prime_UTR | 25.0% |
! | TAAACTATAGAACGAGTTAA+GGG | - | chr8_4:50525775-50525794 | Msa1331120:three_prime_UTR | 25.0% |
!!! | GGTTATTTTTTATATTGAGG+AGG | + | chr8_4:50526061-50526080 | None:intergenic | 25.0% |
!!! | CGGTTAATTTTTATTTGTTG+CGG | - | chr8_4:50526084-50526103 | Msa1331120:three_prime_UTR | 25.0% |
! | ATAGTTCAATTAACAGCTAT+AGG | - | chr8_4:50526476-50526495 | Msa1331120:intron | 25.0% |
!!! | TAAAAAAGGTACTAACTCTT+GGG | + | chr8_4:50526626-50526645 | None:intergenic | 25.0% |
! | TCAGGAGTTTATAAAAACAA+TGG | - | chr8_4:50526821-50526840 | Msa1331120:CDS | 25.0% |
! | CAGGAGTTTATAAAAACAAT+GGG | - | chr8_4:50526822-50526841 | Msa1331120:CDS | 25.0% |
! | TAAATAATCAGAAACGCAAA+CGG | + | chr8_4:50527216-50527235 | None:intergenic | 25.0% |
!! | AACTTGATAAAACATCCTTT+TGG | - | chr8_4:50527305-50527324 | Msa1331120:intron | 25.0% |
!! | ACTTGATAAAACATCCTTTT+GGG | - | chr8_4:50527306-50527325 | Msa1331120:intron | 25.0% |
! | AAATAGTCAATGAGATAAGA+GGG | + | chr8_4:50527422-50527441 | None:intergenic | 25.0% |
! | TAAATAGTCAATGAGATAAG+AGG | + | chr8_4:50527423-50527442 | None:intergenic | 25.0% |
! | GTTCTTATAGTAAGATATGT+CGG | + | chr8_4:50527603-50527622 | None:intergenic | 25.0% |
! | CAAAAAATTGAAATTTGAGG+AGG | + | chr8_4:50528131-50528150 | None:intergenic | 25.0% |
! | GCACAAAAAATTGAAATTTG+AGG | + | chr8_4:50528134-50528153 | None:intergenic | 25.0% |
!! | GCTATAAAGTTTACCAATTT+TGG | + | chr8_4:50528360-50528379 | None:intergenic | 25.0% |
!!! | ATTTTGAAAGAAACGAAGAT+CGG | + | chr8_4:50528494-50528513 | None:intergenic | 25.0% |
! | ACTTCGATAAAACTCAAATT+TGG | + | chr8_4:50528703-50528722 | None:intergenic | 25.0% |
! | ATGTGAATACAAAATAGTTC+CGG | + | chr8_4:50528789-50528808 | None:intergenic | 25.0% |
! | ATTGCTTATACAGATATCTT+GGG | - | chr8_4:50528909-50528928 | Msa1331120:CDS | 25.0% |
! | TAGAAATAATCCTCTTCTTT+GGG | + | chr8_4:50529094-50529113 | None:intergenic | 25.0% |
! | ATAGAAATAATCCTCTTCTT+TGG | + | chr8_4:50529095-50529114 | None:intergenic | 25.0% |
!!! | CTTTTTTGTATCAAGAAAAG+AGG | - | chr8_4:50529281-50529300 | Msa1331120:five_prime_UTR | 25.0% |
!! | TAAAAATATAAAGTATCCCC+CGG | + | chr8_4:50529369-50529388 | None:intergenic | 25.0% |
! | AGTTTAAACATCATTGTACA+CGG | - | chr8_4:50529501-50529520 | Msa1331120:five_prime_UTR | 25.0% |
! | CATATACAAATTTGGATTAC+TGG | - | chr8_4:50529537-50529556 | Msa1331120:five_prime_UTR | 25.0% |
AAACTATAGAACGAGTTAAG+GGG | - | chr8_4:50525776-50525795 | Msa1331120:three_prime_UTR | 30.0% | |
!! | TAACTTCACTCTTTGGAATT+TGG | + | chr8_4:50525809-50525828 | None:intergenic | 30.0% |
TGAATGAATATTATAGCCGA+TGG | + | chr8_4:50525933-50525952 | None:intergenic | 30.0% | |
TGTTGAATTTGAGGAAATGA+AGG | + | chr8_4:50526031-50526050 | None:intergenic | 30.0% | |
!!! | CGCGGTTATTTTTTATATTG+AGG | + | chr8_4:50526064-50526083 | None:intergenic | 30.0% |
CAATATAAAAAATAACCGCG+CGG | - | chr8_4:50526064-50526083 | Msa1331120:three_prime_UTR | 30.0% | |
ACAAATAAAAATTAACCGCG+CGG | + | chr8_4:50526082-50526101 | None:intergenic | 30.0% | |
!! | TGATTTTGATAACTTCGATC+CGG | - | chr8_4:50526201-50526220 | Msa1331120:three_prime_UTR | 30.0% |
!! | TAGTTATTGCTTTTACTCTC+TGG | + | chr8_4:50526311-50526330 | None:intergenic | 30.0% |
GTAAAAGCAATAACTACAAG+TGG | - | chr8_4:50526315-50526334 | Msa1331120:CDS | 30.0% | |
!! | GTAAAAAAGGTACTAACTCT+TGG | + | chr8_4:50526627-50526646 | None:intergenic | 30.0% |
TAAAAACAATGGGTACTTGA+TGG | - | chr8_4:50526832-50526851 | Msa1331120:CDS | 30.0% | |
!! | TGATTTTAGTCCTGAAATGT+AGG | - | chr8_4:50526934-50526953 | Msa1331120:intron | 30.0% |
!! | GATTTTAGTCCTGAAATGTA+GGG | - | chr8_4:50526935-50526954 | Msa1331120:intron | 30.0% |
!! | ATTTTAGTCCTGAAATGTAG+GGG | - | chr8_4:50526936-50526955 | Msa1331120:intron | 30.0% |
TTATATAACCCCTACATTTC+AGG | + | chr8_4:50526947-50526966 | None:intergenic | 30.0% | |
ATTTAGTCCTCAAGATTGTA+GGG | + | chr8_4:50527115-50527134 | None:intergenic | 30.0% | |
TATTTAGTCCTCAAGATTGT+AGG | + | chr8_4:50527116-50527135 | None:intergenic | 30.0% | |
GACATTTAAATATCTGGCAA+TGG | + | chr8_4:50527269-50527288 | None:intergenic | 30.0% | |
AAGCGTGACATTTAAATATC+TGG | + | chr8_4:50527275-50527294 | None:intergenic | 30.0% | |
! | AAGGATGTTTTATCAAGTTC+AGG | + | chr8_4:50527304-50527323 | None:intergenic | 30.0% |
CATTTGTCGATAAAACAAAC+AGG | + | chr8_4:50527361-50527380 | None:intergenic | 30.0% | |
AAATATGTCTTGGAATTCAC+TGG | + | chr8_4:50527459-50527478 | None:intergenic | 30.0% | |
ATTCCAAGACATATTTGATG+TGG | - | chr8_4:50527463-50527482 | Msa1331120:CDS | 30.0% | |
CATATCTTACTATAAGAACC+AGG | - | chr8_4:50527604-50527623 | Msa1331120:CDS | 30.0% | |
! | ACTTTGTGCTTTTGTATCAA+GGG | + | chr8_4:50527754-50527773 | None:intergenic | 30.0% |
! | AACTTTGTGCTTTTGTATCA+AGG | + | chr8_4:50527755-50527774 | None:intergenic | 30.0% |
AGTTGTCCATCTAAATAGAA+CGG | - | chr8_4:50527771-50527790 | Msa1331120:CDS | 30.0% | |
! | ATCAAGCTTCTAAGGAAAAA+CGG | - | chr8_4:50527907-50527926 | Msa1331120:CDS | 30.0% |
! | ATTATTTTCTCTTTCCACCA+AGG | + | chr8_4:50528174-50528193 | None:intergenic | 30.0% |
TCAAAATCATTCATCTCAGA+TGG | - | chr8_4:50528507-50528526 | Msa1331120:CDS | 30.0% | |
! | ATTTTTGTTCCCACATATGA+TGG | - | chr8_4:50528565-50528584 | Msa1331120:intron | 30.0% |
AGTTCAGCTAGTAAAATTTG+TGG | - | chr8_4:50528625-50528644 | Msa1331120:intron | 30.0% | |
TTGTTTATCTGGAGGTTTAA+TGG | + | chr8_4:50528676-50528695 | None:intergenic | 30.0% | |
!! | TTGGAATTTTGTTTATCTGG+AGG | + | chr8_4:50528684-50528703 | None:intergenic | 30.0% |
!!! | GAAAAGTGTTTTCCTTATAC+CGG | - | chr8_4:50528767-50528786 | Msa1331120:CDS | 30.0% |
TACAAAATAGTTCCGGTATA+AGG | + | chr8_4:50528782-50528801 | None:intergenic | 30.0% | |
ATATCTGTATAAGCAATGGA+AGG | + | chr8_4:50528906-50528925 | None:intergenic | 30.0% | |
CAAGATATCTGTATAAGCAA+TGG | + | chr8_4:50528910-50528929 | None:intergenic | 30.0% | |
CATTGCTTATACAGATATCT+TGG | - | chr8_4:50528908-50528927 | Msa1331120:CDS | 30.0% | |
! | GAATTACCAACCTTTTACTA+GGG | + | chr8_4:50529063-50529082 | None:intergenic | 30.0% |
GAGCTAATTCAATAAATCTG+TGG | + | chr8_4:50529236-50529255 | None:intergenic | 30.0% | |
!! | TTCAGTTTTAACAAACACGA+CGG | - | chr8_4:50529258-50529277 | Msa1331120:five_prime_UTR | 30.0% |
! | CTTGATTAGAATTTTTGCGA+AGG | + | chr8_4:50529337-50529356 | None:intergenic | 30.0% |
TGAAAGAAAAACGAATGTGA+TGG | + | chr8_4:50529418-50529437 | None:intergenic | 30.0% | |
ATGAATATTATAGCCGATGG+AGG | + | chr8_4:50525930-50525949 | None:intergenic | 35.0% | |
GGGAAATGTTGTTGAATTTG+AGG | + | chr8_4:50526040-50526059 | None:intergenic | 35.0% | |
ACTGTATTTCTTGTCTGCAT+TGG | - | chr8_4:50526154-50526173 | Msa1331120:three_prime_UTR | 35.0% | |
TAACTACAAGTGGCAAGATT+TGG | - | chr8_4:50526325-50526344 | Msa1331120:CDS | 35.0% | |
AACTACAAGTGGCAAGATTT+GGG | - | chr8_4:50526326-50526345 | Msa1331120:CDS | 35.0% | |
!! | ACAAAAAGAGAGACTAGCTT+CGG | - | chr8_4:50526367-50526386 | Msa1331120:CDS | 35.0% |
TAACAGCTATAGGTGATTTG+TGG | - | chr8_4:50526486-50526505 | Msa1331120:intron | 35.0% | |
! | AACAGCTATAGGTGATTTGT+GGG | - | chr8_4:50526487-50526506 | Msa1331120:intron | 35.0% |
TACGTTGTTGTGATGATATC+AGG | - | chr8_4:50526803-50526822 | Msa1331120:CDS | 35.0% | |
ATTGAATCAAATGAGAGCAG+CGG | - | chr8_4:50526871-50526890 | Msa1331120:CDS | 35.0% | |
TAGTTGCACAATGACACAAA+CGG | + | chr8_4:50527175-50527194 | None:intergenic | 35.0% | |
GATCCACATCAAATATGTCT+TGG | + | chr8_4:50527469-50527488 | None:intergenic | 35.0% | |
GTGGATACTAAAAACTAACC+TGG | + | chr8_4:50527625-50527644 | None:intergenic | 35.0% | |
TGTGAAAGATACGATCACAT+TGG | + | chr8_4:50527651-50527670 | None:intergenic | 35.0% | |
ATCTAAATAGAACGGATGCT+CGG | - | chr8_4:50527779-50527798 | Msa1331120:CDS | 35.0% | |
! | ATGGACATGTTAGCATTTTC+TGG | - | chr8_4:50527961-50527980 | Msa1331120:intron | 35.0% |
!!! | ACCATCTCTTCTTTTCAAGT+CGG | + | chr8_4:50528202-50528221 | None:intergenic | 35.0% |
ATTCAAATCTACATTGCAGC+CGG | - | chr8_4:50528285-50528304 | Msa1331120:intron | 35.0% | |
TTCTCCACCATATATTTCAC+CGG | + | chr8_4:50528307-50528326 | None:intergenic | 35.0% | |
! | TATATGGTGGAGAAAGAAGA+CGG | - | chr8_4:50528313-50528332 | Msa1331120:intron | 35.0% |
!! | TTCAAAGGAGTACCCAAAAT+TGG | - | chr8_4:50528344-50528363 | Msa1331120:intron | 35.0% |
AAGTGGAAAGGAAAACAGTA+AGG | + | chr8_4:50528429-50528448 | None:intergenic | 35.0% | |
GTTTCAACAACAAAGTGGAA+AGG | + | chr8_4:50528441-50528460 | None:intergenic | 35.0% | |
!! | TTCCACTTTGTTGTTGAAAC+AGG | - | chr8_4:50528441-50528460 | Msa1331120:intron | 35.0% |
! | TCCCACATATGATGGAAATA+TGG | - | chr8_4:50528573-50528592 | Msa1331120:intron | 35.0% |
GCCATATTTCCATCATATGT+GGG | + | chr8_4:50528577-50528596 | None:intergenic | 35.0% | |
AAATATGGCCAAAGTAGTTG+CGG | - | chr8_4:50528588-50528607 | Msa1331120:intron | 35.0% | |
! | GTTCAAGAAGACGATTTTAC+TGG | - | chr8_4:50528931-50528950 | Msa1331120:CDS | 35.0% |
! | GGAATTACCAACCTTTTACT+AGG | + | chr8_4:50529064-50529083 | None:intergenic | 35.0% |
!! | TTATTTCTATTCCAACCCAG+AGG | - | chr8_4:50529105-50529124 | Msa1331120:five_prime_UTR | 35.0% |
!! | ATGGTTCTAAACATTCCTCT+GGG | + | chr8_4:50529123-50529142 | None:intergenic | 35.0% |
CTACTCAGCATATCATTTGA+TGG | + | chr8_4:50529142-50529161 | None:intergenic | 35.0% | |
! | ATTTTACATGTACCATCTCC+TGG | - | chr8_4:50529194-50529213 | Msa1331120:five_prime_UTR | 35.0% |
GCTACTATACAAGAATGTGA+TGG | + | chr8_4:50529456-50529475 | None:intergenic | 35.0% | |
TTAAACATCATTGTACACGG+AGG | - | chr8_4:50529504-50529523 | Msa1331120:five_prime_UTR | 35.0% | |
CCATGGTTAACTTCACTCTT+TGG | + | chr8_4:50525816-50525835 | None:intergenic | 40.0% | |
CCAAAGAGTGAAGTTAACCA+TGG | - | chr8_4:50525813-50525832 | Msa1331120:three_prime_UTR | 40.0% | |
GAGTGAAGTTAACCATGGTT+AGG | - | chr8_4:50525818-50525837 | Msa1331120:three_prime_UTR | 40.0% | |
TAACCATGGTTAGGTTAGCA+AGG | - | chr8_4:50525827-50525846 | Msa1331120:three_prime_UTR | 40.0% | |
GTTAGCAAGGTTGTAGGTAT+AGG | - | chr8_4:50525840-50525859 | Msa1331120:three_prime_UTR | 40.0% | |
AAGGTTGTAGGTATAGGTGT+AGG | - | chr8_4:50525846-50525865 | Msa1331120:three_prime_UTR | 40.0% | |
AATATTATAGCCGATGGAGG+TGG | + | chr8_4:50525927-50525946 | None:intergenic | 40.0% | |
GAAGTGTGAGAGAAAATGGA+AGG | + | chr8_4:50526007-50526026 | None:intergenic | 40.0% | |
AGGTGAAGTGTGAGAGAAAA+TGG | + | chr8_4:50526011-50526030 | None:intergenic | 40.0% | |
!! | CAAAAAGAGAGACTAGCTTC+GGG | - | chr8_4:50526368-50526387 | Msa1331120:CDS | 40.0% |
GAAGAGGTAGAATGAAACTG+TGG | - | chr8_4:50526414-50526433 | Msa1331120:CDS | 40.0% | |
GATGATACGTGCAACTACAA+CGG | - | chr8_4:50526436-50526455 | Msa1331120:CDS | 40.0% | |
CAACTACAACGGTGATATTG+TGG | - | chr8_4:50526447-50526466 | Msa1331120:CDS | 40.0% | |
! | ACAGCTATAGGTGATTTGTG+GGG | - | chr8_4:50526488-50526507 | Msa1331120:intron | 40.0% |
TCCACATGTGTAAAACACGA+AGG | + | chr8_4:50526536-50526555 | None:intergenic | 40.0% | |
!! | TGCTTCAAATTCTAGAGCGT+TGG | - | chr8_4:50526562-50526581 | Msa1331120:intron | 40.0% |
!! | AAAAGGTACTAACTCTTGGG+AGG | + | chr8_4:50526623-50526642 | None:intergenic | 40.0% |
! | TACTTGATGGTTTCGTGCAA+TGG | - | chr8_4:50526845-50526864 | Msa1331120:CDS | 40.0% |
AAAATCCTCCTTGATCCTGT+TGG | - | chr8_4:50526982-50527001 | Msa1331120:intron | 40.0% | |
!! | TCTCAATGGACTAACTTGAC+CGG | + | chr8_4:50527012-50527031 | None:intergenic | 40.0% |
!! | CCACTTTGAGATGATCTCAA+TGG | + | chr8_4:50527026-50527045 | None:intergenic | 40.0% |
CCATTGAGATCATCTCAAAG+TGG | - | chr8_4:50527023-50527042 | Msa1331120:intron | 40.0% | |
AGTTGCACAATGACACAAAC+GGG | + | chr8_4:50527174-50527193 | None:intergenic | 40.0% | |
AACTGTGCAGATATGTGACA+TGG | - | chr8_4:50527240-50527259 | Msa1331120:intron | 40.0% | |
!! | CAACTCAAACGGCATTGATA+AGG | + | chr8_4:50527388-50527407 | None:intergenic | 40.0% |
!! | ATCAATGCCGTTTGAGTTGA+AGG | - | chr8_4:50527389-50527408 | Msa1331120:CDS | 40.0% |
CAGAACACCTTCAACTCAAA+CGG | + | chr8_4:50527399-50527418 | None:intergenic | 40.0% | |
TATCACATCCTTGAGAGATG+AGG | - | chr8_4:50527493-50527512 | Msa1331120:CDS | 40.0% | |
AGATATGTCGGACCAACTAA+CGG | + | chr8_4:50527591-50527610 | None:intergenic | 40.0% | |
GAGCATCCGTTCTATTTAGA+TGG | + | chr8_4:50527780-50527799 | None:intergenic | 40.0% | |
! | CTGCGATGCAGAGTTAATTT+TGG | - | chr8_4:50527838-50527857 | Msa1331120:CDS | 40.0% |
GAGATTCACTTCTCAGATAG+AGG | - | chr8_4:50527867-50527886 | Msa1331120:CDS | 40.0% | |
ACTTCTCAGATAGAGGAGTT+GGG | - | chr8_4:50527874-50527893 | Msa1331120:CDS | 40.0% | |
GAAAGGTGATCAAGCTTCTA+AGG | - | chr8_4:50527899-50527918 | Msa1331120:CDS | 40.0% | |
AAGGAAAAACGGTCCATTTC+TGG | - | chr8_4:50527918-50527937 | Msa1331120:intron | 40.0% | |
CTAAGATGAAGGACCAGAAA+TGG | + | chr8_4:50527934-50527953 | None:intergenic | 40.0% | |
!! | CATTTCTGGTCCTTCATCTT+AGG | - | chr8_4:50527932-50527951 | Msa1331120:intron | 40.0% |
CCATCTCATACCTAAGATGA+AGG | + | chr8_4:50527945-50527964 | None:intergenic | 40.0% | |
CCTTCATCTTAGGTATGAGA+TGG | - | chr8_4:50527942-50527961 | Msa1331120:intron | 40.0% | |
TCAAGGTTGTAACAGTGATG+AGG | - | chr8_4:50527990-50528009 | Msa1331120:intron | 40.0% | |
TGGAAGAGTTGACAAGAATG+AGG | - | chr8_4:50528013-50528032 | Msa1331120:intron | 40.0% | |
TTTCTCTTTCCACCAAGGAT+AGG | + | chr8_4:50528169-50528188 | None:intergenic | 40.0% | |
! | TCCGACTTGAAAAGAAGAGA+TGG | - | chr8_4:50528198-50528217 | Msa1331120:intron | 40.0% |
ATTGCAGCCGGTGAAATATA+TGG | - | chr8_4:50528297-50528316 | Msa1331120:intron | 40.0% | |
AAGACGGACAAGTCTTTCAA+AGG | - | chr8_4:50528329-50528348 | Msa1331120:intron | 40.0% | |
TAGCTAAACTAAAGGCAGCA+TGG | - | chr8_4:50528376-50528395 | Msa1331120:intron | 40.0% | |
GACCTGTTTCAACAACAAAG+TGG | + | chr8_4:50528446-50528465 | None:intergenic | 40.0% | |
!! | CTTTGTTGTTGAAACAGGTC+AGG | - | chr8_4:50528446-50528465 | Msa1331120:intron | 40.0% |
TGAAAGAAACGAAGATCGGA+TGG | + | chr8_4:50528490-50528509 | None:intergenic | 40.0% | |
GGCCATATTTCCATCATATG+TGG | + | chr8_4:50528578-50528597 | None:intergenic | 40.0% | |
AATATGGCCAAAGTAGTTGC+GGG | - | chr8_4:50528589-50528608 | Msa1331120:intron | 40.0% | |
TGGAAGGTTGTCAATTCACT+TGG | + | chr8_4:50528890-50528909 | None:intergenic | 40.0% | |
CCTTCACAGCTGAAGAAAAT+TGG | + | chr8_4:50529015-50529034 | None:intergenic | 40.0% | |
! | CCAATTTTCTTCAGCTGTGA+AGG | - | chr8_4:50529012-50529031 | Msa1331120:CDS | 40.0% |
TTCTAAACATTCCTCTGGGT+TGG | + | chr8_4:50529119-50529138 | None:intergenic | 40.0% | |
!! | GATGGTTCTAAACATTCCTC+TGG | + | chr8_4:50529124-50529143 | None:intergenic | 40.0% |
TAGCACGTGACAAATGTGTT+TGG | - | chr8_4:50529159-50529178 | Msa1331120:five_prime_UTR | 40.0% | |
AAGAGGCAGACATAGAGAAA+AGG | - | chr8_4:50529298-50529317 | Msa1331120:five_prime_UTR | 40.0% | |
ACATAGAGAAAAGGTGGAGT+GGG | - | chr8_4:50529307-50529326 | Msa1331120:five_prime_UTR | 40.0% | |
TCTAATCAAGCAAAAGCAGC+CGG | - | chr8_4:50529347-50529366 | Msa1331120:five_prime_UTR | 40.0% | |
ATTACTGGATCTGCAGTTTG+TGG | - | chr8_4:50529552-50529571 | Msa1331120:five_prime_UTR | 40.0% | |
TTTGTGGAAGCTTAAACCAC+TGG | - | chr8_4:50529568-50529587 | Msa1331120:five_prime_UTR | 40.0% | |
CAACCTTGCTAACCTAACCA+TGG | + | chr8_4:50525833-50525852 | None:intergenic | 45.0% | |
GGTTAGGTTAGCAAGGTTGT+AGG | - | chr8_4:50525834-50525853 | Msa1331120:three_prime_UTR | 45.0% | |
!! | AGAGAAAATGGAAGGTGCTC+CGG | + | chr8_4:50525999-50526018 | None:intergenic | 45.0% |
GTTGTTCAACGAAACGACAC+CGG | + | chr8_4:50526223-50526242 | None:intergenic | 45.0% | |
!! | GGTGTCGTTTCGTTGAACAA+CGG | - | chr8_4:50526222-50526241 | Msa1331120:CDS | 45.0% |
ACAAGTGGCAAGATTTGGGT+TGG | - | chr8_4:50526330-50526349 | Msa1331120:CDS | 45.0% | |
!! | TGGCAAGATTTGGGTTGGAT+GGG | - | chr8_4:50526335-50526354 | Msa1331120:CDS | 45.0% |
!! | TTTGGGTTGGATGGGTTTGA+AGG | - | chr8_4:50526343-50526362 | Msa1331120:CDS | 45.0% |
! | GCCTTCGTGTTTTACACATG+TGG | - | chr8_4:50526532-50526551 | Msa1331120:intron | 45.0% |
TAACTCTTGGGAGGAAGAAC+TGG | + | chr8_4:50526614-50526633 | None:intergenic | 45.0% | |
! | TTGATGGTTTCGTGCAATGG+AGG | - | chr8_4:50526848-50526867 | Msa1331120:CDS | 45.0% |
GGGTCAGACAATTCAGTATC+TGG | + | chr8_4:50527095-50527114 | None:intergenic | 45.0% | |
TGTCTGACCCTACAATCTTG+AGG | - | chr8_4:50527105-50527124 | Msa1331120:CDS | 45.0% | |
GTTGCACAATGACACAAACG+GGG | + | chr8_4:50527173-50527192 | None:intergenic | 45.0% | |
AACGCAAACGGAAACAGTAC+AGG | + | chr8_4:50527204-50527223 | None:intergenic | 45.0% | |
ATTGAGTGAGAGACTCACCT+AGG | + | chr8_4:50527337-50527356 | None:intergenic | 45.0% | |
ACTTTCAGCTTGAGTCTAGG+AGG | + | chr8_4:50527539-50527558 | None:intergenic | 45.0% | |
TCCTAGACTCAAGCTGAAAG+TGG | - | chr8_4:50527538-50527557 | Msa1331120:CDS | 45.0% | |
TCCACTTTCAGCTTGAGTCT+AGG | + | chr8_4:50527542-50527561 | None:intergenic | 45.0% | |
! | TAACGGGTGGCATAGTGTAA+AGG | + | chr8_4:50527574-50527593 | None:intergenic | 45.0% |
GATATGTCGGACCAACTAAC+GGG | + | chr8_4:50527590-50527609 | None:intergenic | 45.0% | |
!! | GATACGATCACATTGGCTTG+TGG | + | chr8_4:50527644-50527663 | None:intergenic | 45.0% |
CACTTCTCAGATAGAGGAGT+TGG | - | chr8_4:50527873-50527892 | Msa1331120:CDS | 45.0% | |
!!! | GCATTTTCTGGCTGTACTCA+AGG | - | chr8_4:50527973-50527992 | Msa1331120:intron | 45.0% |
AGGTTGTAACAGTGATGAGG+TGG | - | chr8_4:50527993-50528012 | Msa1331120:intron | 45.0% | |
TTGGCAGATATGCCTATCCT+TGG | - | chr8_4:50528154-50528173 | Msa1331120:intron | 45.0% | |
TTTATGTCCTCTAACACCCG+AGG | - | chr8_4:50528221-50528240 | Msa1331120:intron | 45.0% | |
GTCAAGAGCCCTTAGTGTAA+GGG | + | chr8_4:50528253-50528272 | None:intergenic | 45.0% | |
TGTCAAGAGCCCTTAGTGTA+AGG | + | chr8_4:50528254-50528273 | None:intergenic | 45.0% | |
GTTGTTGAAACAGGTCAGGA+AGG | - | chr8_4:50528450-50528469 | Msa1331120:intron | 45.0% | |
TTCATCTCAGATGGCAGCAT+TGG | - | chr8_4:50528516-50528535 | Msa1331120:CDS | 45.0% | |
TACTAGCTGAACTGTACCTG+CGG | + | chr8_4:50528618-50528637 | None:intergenic | 45.0% | |
ACAATAACGGTGCACTGAAC+TGG | - | chr8_4:50528987-50529006 | Msa1331120:CDS | 45.0% | |
CAATAACGGTGCACTGAACT+GGG | - | chr8_4:50528988-50529007 | Msa1331120:CDS | 45.0% | |
GCATGGGTAACCCTAGTAAA+AGG | - | chr8_4:50529050-50529069 | Msa1331120:CDS | 45.0% | |
GGGTAACCCTAGTAAAAGGT+TGG | - | chr8_4:50529054-50529073 | Msa1331120:CDS | 45.0% | |
AAACCAAGTGTACCAGGAGA+TGG | + | chr8_4:50529209-50529228 | None:intergenic | 45.0% | |
GGTAGAAAACCAAGTGTACC+AGG | + | chr8_4:50529215-50529234 | None:intergenic | 45.0% | |
AGGCAGACATAGAGAAAAGG+TGG | - | chr8_4:50529301-50529320 | Msa1331120:five_prime_UTR | 45.0% | |
GACATAGAGAAAAGGTGGAG+TGG | - | chr8_4:50529306-50529325 | Msa1331120:five_prime_UTR | 45.0% | |
CTAATCAAGCAAAAGCAGCC+GGG | - | chr8_4:50529348-50529367 | Msa1331120:five_prime_UTR | 45.0% | |
TAATCAAGCAAAAGCAGCCG+GGG | - | chr8_4:50529349-50529368 | Msa1331120:five_prime_UTR | 45.0% | |
TCTTTCCTCACCACCTCCAT+CGG | - | chr8_4:50525914-50525933 | Msa1331120:three_prime_UTR | 50.0% | |
CTTCTTCCTTCTTCGCTCTC+CGG | - | chr8_4:50525959-50525978 | Msa1331120:three_prime_UTR | 50.0% | |
!! | GTGGCAAGATTTGGGTTGGA+TGG | - | chr8_4:50526334-50526353 | Msa1331120:CDS | 50.0% |
!! | AGAGAGACTAGCTTCGGGTT+CGG | - | chr8_4:50526373-50526392 | Msa1331120:CDS | 50.0% |
! | TTCGGGTTCGGGTTTAGGTT+CGG | - | chr8_4:50526385-50526404 | Msa1331120:CDS | 50.0% |
! | TTAGGTTCGGGTTCAGGAAG+AGG | - | chr8_4:50526398-50526417 | Msa1331120:CDS | 50.0% |
TGGGGTCCTCGAGTTCTTAA+GGG | - | chr8_4:50526506-50526525 | Msa1331120:intron | 50.0% | |
GTCCTCGAGTTCTTAAGGGT+TGG | - | chr8_4:50526510-50526529 | Msa1331120:intron | 50.0% | |
GAATCAAATGAGAGCAGCGG+TGG | - | chr8_4:50526874-50526893 | Msa1331120:CDS | 50.0% | |
TCCTCCTTGATCCTGTTGGT+AGG | - | chr8_4:50526986-50527005 | Msa1331120:intron | 50.0% | |
! | CATCCTTTTGGGCTGATCCT+AGG | - | chr8_4:50527317-50527336 | Msa1331120:intron | 50.0% |
TCACCTAGGATCAGCCCAAA+AGG | + | chr8_4:50527323-50527342 | None:intergenic | 50.0% | |
CATCCTTGAGAGATGAGGTG+CGG | - | chr8_4:50527498-50527517 | Msa1331120:CDS | 50.0% | |
TATCCGCACCTCATCTCTCA+AGG | + | chr8_4:50527504-50527523 | None:intergenic | 50.0% | |
CTCAAGCTGAAAGTGGAACG+TGG | - | chr8_4:50527545-50527564 | Msa1331120:CDS | 50.0% | |
ACACTATGCCACCCGTTAGT+TGG | - | chr8_4:50527576-50527595 | Msa1331120:CDS | 50.0% | |
AAATAGAACGGATGCTCGGC+TGG | - | chr8_4:50527783-50527802 | Msa1331120:CDS | 50.0% | |
! | GCTTCTGAATCTCTGGAGGT+TGG | + | chr8_4:50527819-50527838 | None:intergenic | 50.0% |
CATCGCAGCTTCTGAATCTC+TGG | + | chr8_4:50527826-50527845 | None:intergenic | 50.0% | |
GATAGAGGAGTTGGGCAGAA+AGG | - | chr8_4:50527882-50527901 | Msa1331120:CDS | 50.0% | |
GCAGATATGCCTATCCTTGG+TGG | - | chr8_4:50528157-50528176 | Msa1331120:intron | 50.0% | |
TAGTGTAAGGGCAGTCTCCT+CGG | + | chr8_4:50528241-50528260 | None:intergenic | 50.0% | |
AGGAGACTGCCCTTACACTA+AGG | - | chr8_4:50528241-50528260 | Msa1331120:intron | 50.0% | |
GGAGACTGCCCTTACACTAA+GGG | - | chr8_4:50528242-50528261 | Msa1331120:intron | 50.0% | |
GCAGCCGGTGAAATATATGG+TGG | - | chr8_4:50528300-50528319 | Msa1331120:intron | 50.0% | |
GGTCAGGAAGGAAACACTGT+TGG | - | chr8_4:50528462-50528481 | Msa1331120:intron | 50.0% | |
GAATCGCATGCTCATCGCAT+GGG | - | chr8_4:50529034-50529053 | Msa1331120:CDS | 50.0% | |
TCCTGACAAGCCCAAAGAAG+AGG | - | chr8_4:50529081-50529100 | Msa1331120:exon | 50.0% | |
TCCTCTTCTTTGGGCTTGTC+AGG | + | chr8_4:50529085-50529104 | None:intergenic | 50.0% | |
GTACCATCTCCTGGTACACT+TGG | - | chr8_4:50529203-50529222 | Msa1331120:five_prime_UTR | 50.0% | |
AATCAAGCAAAAGCAGCCGG+GGG | - | chr8_4:50529350-50529369 | Msa1331120:five_prime_UTR | 50.0% | |
TATAGCCGATGGAGGTGGTG+AGG | + | chr8_4:50525922-50525941 | None:intergenic | 55.0% | |
!! | GAGAGACTAGCTTCGGGTTC+GGG | - | chr8_4:50526374-50526393 | Msa1331120:CDS | 55.0% |
! | CTAGCTTCGGGTTCGGGTTT+AGG | - | chr8_4:50526380-50526399 | Msa1331120:CDS | 55.0% |
! | TCGGGTTCGGGTTTAGGTTC+GGG | - | chr8_4:50526386-50526405 | Msa1331120:CDS | 55.0% |
! | TCGGGTTTAGGTTCGGGTTC+AGG | - | chr8_4:50526392-50526411 | Msa1331120:CDS | 55.0% |
GTGGGGTCCTCGAGTTCTTA+AGG | - | chr8_4:50526505-50526524 | Msa1331120:intron | 55.0% | |
GGCCAACCCTTAAGAACTCG+AGG | + | chr8_4:50526515-50526534 | None:intergenic | 55.0% | |
CTCTTGGGAGGAAGAACTGG+TGG | + | chr8_4:50526611-50526630 | None:intergenic | 55.0% | |
TCAAATGAGAGCAGCGGTGG+TGG | - | chr8_4:50526877-50526896 | Msa1331120:CDS | 55.0% | |
GCCTACCAACAGGATCAAGG+AGG | + | chr8_4:50526990-50527009 | None:intergenic | 55.0% | |
! | CCTTGATCCTGTTGGTAGGC+CGG | - | chr8_4:50526990-50527009 | Msa1331120:intron | 55.0% |
AACTTGACCGGCCTACCAAC+AGG | + | chr8_4:50527000-50527019 | None:intergenic | 55.0% | |
ATGTCGGACCAACTAACGGG+TGG | + | chr8_4:50527587-50527606 | None:intergenic | 55.0% | |
! | GATGCTCGGCTGGCCAATAA+CGG | - | chr8_4:50527793-50527812 | Msa1331120:CDS | 55.0% |
! | CTCTGGAGGTTGGCCGTTAT+TGG | + | chr8_4:50527809-50527828 | None:intergenic | 55.0% |
CGCAGCTTCTGAATCTCTGG+AGG | + | chr8_4:50527823-50527842 | None:intergenic | 55.0% | |
AGTGTAAGGGCAGTCTCCTC+GGG | + | chr8_4:50528240-50528259 | None:intergenic | 55.0% | |
TAGCTGAACTGTACCTGCGG+TGG | + | chr8_4:50528615-50528634 | None:intergenic | 55.0% | |
GGAATCGCATGCTCATCGCA+TGG | - | chr8_4:50529033-50529052 | Msa1331120:CDS | 55.0% | |
AGTAGCCACCCTGACATTGC+AGG | - | chr8_4:50529470-50529489 | Msa1331120:five_prime_UTR | 55.0% | |
GTAGCCACCCTGACATTGCA+GGG | - | chr8_4:50529471-50529490 | Msa1331120:five_prime_UTR | 55.0% | |
GCACTCACCCTGCAATGTCA+GGG | + | chr8_4:50529481-50529500 | None:intergenic | 55.0% | |
TGCACTCACCCTGCAATGTC+AGG | + | chr8_4:50529482-50529501 | None:intergenic | 55.0% | |
! | AAGGTGCTCCGGCGAGAATG+TGG | + | chr8_4:50525988-50526007 | None:intergenic | 60.0% |
! | CGGTGGTGGTTTGCGCAATG+TGG | - | chr8_4:50526891-50526910 | Msa1331120:CDS | 60.0% |
CCGGCCTACCAACAGGATCA+AGG | + | chr8_4:50526993-50527012 | None:intergenic | 60.0% | |
GCAGTCTCCTCGGGTGTTAG+AGG | + | chr8_4:50528231-50528250 | None:intergenic | 60.0% | |
CTCACCCTGCAATGTCAGGG+TGG | + | chr8_4:50529478-50529497 | None:intergenic | 60.0% | |
TGGTGGCCGGAGAGCGAAGA+AGG | + | chr8_4:50525968-50525987 | None:intergenic | 65.0% | |
TCCGGCCACCACATTCTCGC+CGG | - | chr8_4:50525977-50525996 | Msa1331120:three_prime_UTR | 65.0% | |
TCCGGCGAGAATGTGGTGGC+CGG | + | chr8_4:50525981-50526000 | None:intergenic | 65.0% | |
GTGCTCCGGCGAGAATGTGG+TGG | + | chr8_4:50525985-50526004 | None:intergenic | 65.0% | |
GCGGTGGCCCGCAACTACTT+TGG | + | chr8_4:50528599-50528618 | None:intergenic | 65.0% | |
AAGTAGTTGCGGGCCACCGC+AGG | - | chr8_4:50528599-50528618 | Msa1331120:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 50525761 | 50529629 | 50525761 | ID=Msa1331120;Name=Msa1331120 |
chr8_4 | mRNA | 50525761 | 50529629 | 50525761 | ID=Msa1331120-mRNA-1;Parent=Msa1331120;Name=Msa1331120-mRNA-1;_AED=0.06;_eAED=0.06;_QI=538|0.85|0.87|1|1|1|8|461|519 |
chr8_4 | exon | 50525761 | 50526468 | 50525761 | ID=Msa1331120-mRNA-1:exon:14794;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50526770 | 50526927 | 50526770 | ID=Msa1331120-mRNA-1:exon:14793;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50527025 | 50527229 | 50527025 | ID=Msa1331120-mRNA-1:exon:14792;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50527356 | 50527645 | 50527356 | ID=Msa1331120-mRNA-1:exon:14791;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50527765 | 50527930 | 50527765 | ID=Msa1331120-mRNA-1:exon:14790;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50528052 | 50528140 | 50528052 | ID=Msa1331120-mRNA-1:exon:14789;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50528492 | 50528565 | 50528492 | ID=Msa1331120-mRNA-1:exon:14788;Parent=Msa1331120-mRNA-1 |
chr8_4 | exon | 50528761 | 50529629 | 50528761 | ID=Msa1331120-mRNA-1:exon:14787;Parent=Msa1331120-mRNA-1 |
chr8_4 | five_prime_UTR | 50529092 | 50529629 | 50529092 | ID=Msa1331120-mRNA-1:five_prime_utr;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50528761 | 50529091 | 50528761 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50528492 | 50528565 | 50528492 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50528052 | 50528140 | 50528052 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50527765 | 50527930 | 50527765 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50527356 | 50527645 | 50527356 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50527025 | 50527229 | 50527025 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50526770 | 50526927 | 50526770 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | CDS | 50526222 | 50526468 | 50526222 | ID=Msa1331120-mRNA-1:cds;Parent=Msa1331120-mRNA-1 |
chr8_4 | three_prime_UTR | 50525761 | 50526221 | 50525761 | ID=Msa1331120-mRNA-1:three_prime_utr;Parent=Msa1331120-mRNA-1 |
Gene Sequence |
Protein sequence |