Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298500 | XP_003596932.1 | 91.626 | 406 | 14 | 5 | 1 | 389 | 1 | 403 | 0.0 | 646 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298500 | sp|Q8RWC5|FLA16_ARATH | 69.786 | 374 | 92 | 6 | 28 | 381 | 33 | 405 | 1.09e-162 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298500 | G7IRI1 | 91.626 | 406 | 14 | 5 | 1 | 389 | 1 | 403 | 0.0 | 646 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0298500 | 0.802571 | 5.266768e-49 | -8.615850e-47 |
| Msa0039790 | Msa0298500 | 0.849041 | 4.170047e-60 | -8.615850e-47 |
| Msa0050740 | Msa0298500 | 0.801458 | 8.919331e-49 | -8.615850e-47 |
| Msa0050750 | Msa0298500 | 0.837735 | 4.361722e-57 | -8.615850e-47 |
| Msa0054690 | Msa0298500 | 0.806347 | 8.596647e-50 | -8.615850e-47 |
| Msa0054880 | Msa0298500 | 0.862720 | 4.149325e-64 | -8.615850e-47 |
| Msa0081520 | Msa0298500 | 0.838589 | 2.629658e-57 | -8.615850e-47 |
| Msa0087450 | Msa0298500 | 0.823678 | 1.216970e-53 | -8.615850e-47 |
| Msa0090400 | Msa0298500 | 0.816797 | 4.594985e-52 | -8.615850e-47 |
| Msa0094780 | Msa0298500 | 0.812898 | 3.361906e-51 | -8.615850e-47 |
| Msa0095900 | Msa0298500 | 0.826640 | 2.428507e-54 | -8.615850e-47 |
| Msa0128310 | Msa0298500 | 0.816690 | 4.856459e-52 | -8.615850e-47 |
| Msa0134180 | Msa0298500 | 0.812380 | 4.364898e-51 | -8.615850e-47 |
| Msa0136650 | Msa0298500 | 0.878058 | 3.818351e-69 | -8.615850e-47 |
| Msa0137880 | Msa0298500 | 0.822257 | 2.609897e-53 | -8.615850e-47 |
| Msa0140280 | Msa0298500 | 0.802336 | 5.888160e-49 | -8.615850e-47 |
| Msa0173730 | Msa0298500 | 0.806219 | 9.148513e-50 | -8.615850e-47 |
| Msa0173890 | Msa0298500 | 0.811843 | 5.717308e-51 | -8.615850e-47 |
| Msa0174450 | Msa0298500 | 0.859124 | 5.138845e-63 | -8.615850e-47 |
| Msa0180930 | Msa0298500 | 0.854885 | 9.138261e-62 | -8.615850e-47 |
| Msa0182190 | Msa0298500 | 0.805048 | 1.611191e-49 | -8.615850e-47 |
| Msa0195010 | Msa0298500 | 0.801453 | 8.941641e-49 | -8.615850e-47 |
| Msa0222560 | Msa0298500 | 0.872447 | 3.157927e-67 | -8.615850e-47 |
| Msa0225460 | Msa0298500 | 0.847967 | 8.271979e-60 | -8.615850e-47 |
| Msa0225680 | Msa0298500 | 0.844659 | 6.591327e-59 | -8.615850e-47 |
| Msa0225860 | Msa0298500 | 0.823768 | 1.159205e-53 | -8.615850e-47 |
| Msa0237080 | Msa0298500 | 0.806584 | 7.663606e-50 | -8.615850e-47 |
| Msa0242590 | Msa0298500 | 0.819920 | 9.011737e-53 | -8.615850e-47 |
| Msa0253700 | Msa0298500 | 0.802082 | 6.641723e-49 | -8.615850e-47 |
| Msa0264870 | Msa0298500 | 0.803213 | 3.881734e-49 | -8.615850e-47 |
| Msa0267110 | Msa0298500 | 0.841821 | 3.765936e-58 | -8.615850e-47 |
| Msa0274680 | Msa0298500 | 0.834370 | 3.116549e-56 | -8.615850e-47 |
| Msa0280790 | Msa0298500 | 0.804512 | 2.084816e-49 | -8.615850e-47 |
| Msa0292400 | Msa0298500 | 0.825743 | 3.967722e-54 | -8.615850e-47 |
| Msa0298470 | Msa0298500 | 0.807685 | 4.478945e-50 | -8.615850e-47 |
| Msa0298500 | Msa0301820 | 0.868625 | 5.682913e-66 | -8.615850e-47 |
| Msa0298500 | Msa0349710 | 0.808071 | 3.708536e-50 | -8.615850e-47 |
| Msa0298500 | Msa0369790 | 0.808796 | 2.596928e-50 | -8.615850e-47 |
| Msa0298500 | Msa0378720 | 0.821232 | 4.505633e-53 | -8.615850e-47 |
| Msa0298500 | Msa0380620 | 0.873957 | 9.826195e-68 | -8.615850e-47 |
| Msa0298500 | Msa0383320 | 0.812772 | 3.584037e-51 | -8.615850e-47 |
| Msa0298500 | Msa0390970 | 0.873151 | 1.836348e-67 | -8.615850e-47 |
| Msa0298500 | Msa0428370 | 0.815635 | 8.357691e-52 | -8.615850e-47 |
| Msa0298500 | Msa0430260 | 0.875797 | 2.321413e-68 | -8.615850e-47 |
| Msa0298500 | Msa0430300 | 0.816759 | 4.686646e-52 | -8.615850e-47 |
| Msa0298500 | Msa0464000 | 0.804578 | 2.019354e-49 | -8.615850e-47 |
| Msa0298500 | Msa0472950 | 0.810795 | 9.650083e-51 | -8.615850e-47 |
| Msa0298500 | Msa0474730 | 0.823866 | 1.099507e-53 | -8.615850e-47 |
| Msa0298500 | Msa0483910 | 0.804676 | 1.926967e-49 | -8.615850e-47 |
| Msa0298500 | Msa0484380 | 0.813402 | 2.606860e-51 | -8.615850e-47 |
| Msa0298500 | Msa0495300 | 0.802623 | 5.137305e-49 | -8.615850e-47 |
| Msa0298500 | Msa0500380 | 0.864953 | 8.388731e-65 | -8.615850e-47 |
| Msa0298500 | Msa0509550 | 0.810230 | 1.278174e-50 | -8.615850e-47 |
| Msa0298500 | Msa0513160 | 0.809318 | 2.007614e-50 | -8.615850e-47 |
| Msa0298500 | Msa0527860 | 0.861112 | 1.289202e-63 | -8.615850e-47 |
| Msa0298500 | Msa0545340 | 0.801180 | 1.016694e-48 | -8.615850e-47 |
| Msa0298500 | Msa0548470 | 0.821356 | 4.216712e-53 | -8.615850e-47 |
| Msa0298500 | Msa0567170 | 0.826433 | 2.720793e-54 | -8.615850e-47 |
| Msa0298500 | Msa0573850 | 0.809740 | 1.629681e-50 | -8.615850e-47 |
| Msa0298500 | Msa0574890 | 0.810945 | 8.956402e-51 | -8.615850e-47 |
| Msa0298500 | Msa0580370 | 0.829387 | 5.297019e-55 | -8.615850e-47 |
| Msa0298500 | Msa0582450 | 0.864131 | 1.516438e-64 | -8.615850e-47 |
| Msa0298500 | Msa0586190 | 0.861836 | 7.755464e-64 | -8.615850e-47 |
| Msa0298500 | Msa0597790 | 0.818948 | 1.501562e-52 | -8.615850e-47 |
| Msa0298500 | Msa0600930 | 0.815395 | 9.450622e-52 | -8.615850e-47 |
| Msa0298500 | Msa0611110 | 0.806779 | 6.968097e-50 | -8.615850e-47 |
| Msa0298500 | Msa0621730 | 0.870392 | 1.510390e-66 | -8.615850e-47 |
| Msa0298500 | Msa0623900 | 0.804198 | 2.423726e-49 | -8.615850e-47 |
| Msa0298500 | Msa0623910 | 0.820882 | 5.424116e-53 | -8.615850e-47 |
| Msa0298500 | Msa0625630 | 0.860270 | 2.321370e-63 | -8.615850e-47 |
| Msa0298500 | Msa0626450 | 0.871174 | 8.352714e-67 | -8.615850e-47 |
| Msa0298500 | Msa0626490 | 0.871095 | 8.868147e-67 | -8.615850e-47 |
| Msa0298500 | Msa0637560 | 0.805726 | 1.161732e-49 | -8.615850e-47 |
| Msa0298500 | Msa0637580 | 0.801445 | 8.974346e-49 | -8.615850e-47 |
| Msa0298500 | Msa0643300 | 0.807644 | 4.570922e-50 | -8.615850e-47 |
| Msa0298500 | Msa0644410 | 0.827734 | 1.328201e-54 | -8.615850e-47 |
| Msa0298500 | Msa0658640 | 0.829623 | 4.640226e-55 | -8.615850e-47 |
| Msa0298500 | Msa0660370 | 0.808358 | 3.220655e-50 | -8.615850e-47 |
| Msa0298500 | Msa0663300 | 0.866727 | 2.308306e-65 | -8.615850e-47 |
| Msa0298500 | Msa0664060 | 0.868428 | 6.577431e-66 | -8.615850e-47 |
| Msa0298500 | Msa0664600 | 0.871035 | 9.285242e-67 | -8.615850e-47 |
| Msa0298500 | Msa0679870 | 0.814485 | 1.503998e-51 | -8.615850e-47 |
| Msa0298500 | Msa0681280 | 0.800941 | 1.137899e-48 | -8.615850e-47 |
| Msa0298500 | Msa0683570 | 0.821657 | 3.592836e-53 | -8.615850e-47 |
| Msa0298500 | Msa0703600 | 0.817613 | 3.011602e-52 | -8.615850e-47 |
| Msa0298500 | Msa0709200 | 0.818434 | 1.964504e-52 | -8.615850e-47 |
| Msa0298500 | Msa0711400 | 0.823461 | 1.368129e-53 | -8.615850e-47 |
| Msa0298500 | Msa0718550 | 0.812677 | 3.758983e-51 | -8.615850e-47 |
| Msa0298500 | Msa0735780 | 0.811804 | 5.828367e-51 | -8.615850e-47 |
| Msa0298500 | Msa0754520 | 0.838602 | 2.607965e-57 | -8.615850e-47 |
| Msa0298500 | Msa0759650 | 0.829655 | 4.558545e-55 | -8.615850e-47 |
| Msa0298500 | Msa0768990 | 0.809018 | 2.327936e-50 | -8.615850e-47 |
| Msa0298500 | Msa0795870 | 0.842127 | 3.126035e-58 | -8.615850e-47 |
| Msa0298500 | Msa0801210 | 0.827311 | 1.678003e-54 | -8.615850e-47 |
| Msa0298500 | Msa0823820 | 0.801167 | 1.023258e-48 | -8.615850e-47 |
| Msa0298500 | Msa0824450 | 0.824957 | 6.090684e-54 | -8.615850e-47 |
| Msa0298500 | Msa0830130 | 0.801979 | 6.973962e-49 | -8.615850e-47 |
| Msa0298500 | Msa0833220 | 0.844958 | 5.475357e-59 | -8.615850e-47 |
| Msa0298500 | Msa0833650 | 0.829752 | 4.318457e-55 | -8.615850e-47 |
| Msa0298500 | Msa0839560 | 0.822800 | 1.951189e-53 | -8.615850e-47 |
| Msa0298500 | Msa0861510 | 0.810967 | 8.859520e-51 | -8.615850e-47 |
| Msa0298500 | Msa0861600 | 0.811900 | 5.556006e-51 | -8.615850e-47 |
| Msa0298500 | Msa0869780 | 0.811115 | 8.228732e-51 | -8.615850e-47 |
| Msa0298500 | Msa0880270 | 0.825905 | 3.633461e-54 | -8.615850e-47 |
| Msa0298500 | Msa0945110 | 0.809525 | 1.812242e-50 | -8.615850e-47 |
| Msa0298500 | Msa0968670 | 0.806247 | 9.022703e-50 | -8.615850e-47 |
| Msa0298500 | Msa0981320 | 0.874142 | 8.505432e-68 | -8.615850e-47 |
| Msa0298500 | Msa1003800 | 0.806245 | 9.033259e-50 | -8.615850e-47 |
| Msa0298500 | Msa1018690 | 0.836763 | 7.731562e-57 | -8.615850e-47 |
| Msa0298500 | Msa1020480 | 0.834939 | 2.242250e-56 | -8.615850e-47 |
| Msa0298500 | Msa1030980 | 0.808014 | 3.812991e-50 | -8.615850e-47 |
| Msa0298500 | Msa1030990 | 0.819965 | 8.804916e-53 | -8.615850e-47 |
| Msa0298500 | Msa1031040 | 0.829489 | 5.003633e-55 | -8.615850e-47 |
| Msa0298500 | Msa1035060 | 0.803600 | 3.226076e-49 | -8.615850e-47 |
| Msa0298500 | Msa1042160 | 0.832207 | 1.078285e-55 | -8.615850e-47 |
| Msa0298500 | Msa1042190 | 0.835665 | 1.470071e-56 | -8.615850e-47 |
| Msa0298500 | Msa1045140 | 0.833540 | 5.029707e-56 | -8.615850e-47 |
| Msa0298500 | Msa1070130 | 0.803397 | 3.554962e-49 | -8.615850e-47 |
| Msa0298500 | Msa1080000 | 0.810349 | 1.204821e-50 | -8.615850e-47 |
| Msa0298500 | Msa1085330 | 0.808177 | 3.520166e-50 | -8.615850e-47 |
| Msa0298500 | Msa1113340 | 0.848631 | 5.419027e-60 | -8.615850e-47 |
| Msa0298500 | Msa1123210 | 0.832263 | 1.044320e-55 | -8.615850e-47 |
| Msa0298500 | Msa1132840 | 0.829331 | 5.464387e-55 | -8.615850e-47 |
| Msa0298500 | Msa1147910 | 0.803385 | 3.576080e-49 | -8.615850e-47 |
| Msa0298500 | Msa1157870 | 0.816676 | 4.890310e-52 | -8.615850e-47 |
| Msa0298500 | Msa1160910 | 0.802291 | 6.013799e-49 | -8.615850e-47 |
| Msa0298500 | Msa1167470 | 0.831630 | 1.496781e-55 | -8.615850e-47 |
| Msa0298500 | Msa1173330 | 0.841438 | 4.750967e-58 | -8.615850e-47 |
| Msa0298500 | Msa1174840 | 0.814234 | 1.709000e-51 | -8.615850e-47 |
| Msa0298500 | Msa1175180 | 0.802948 | 4.401948e-49 | -8.615850e-47 |
| Msa0298500 | Msa1186520 | 0.818662 | 1.743343e-52 | -8.615850e-47 |
| Msa0298500 | Msa1192570 | 0.807026 | 6.179628e-50 | -8.615850e-47 |
| Msa0298500 | Msa1200370 | 0.811349 | 7.317762e-51 | -8.615850e-47 |
| Msa0298500 | Msa1200890 | 0.807664 | 4.526749e-50 | -8.615850e-47 |
| Msa0298500 | Msa1208950 | 0.813504 | 2.474943e-51 | -8.615850e-47 |
| Msa0298500 | Msa1212890 | 0.852244 | 5.241516e-61 | -8.615850e-47 |
| Msa0298500 | Msa1215870 | 0.836900 | 7.135638e-57 | -8.615850e-47 |
| Msa0298500 | Msa1223470 | 0.819265 | 1.272050e-52 | -8.615850e-47 |
| Msa0298500 | Msa1226520 | 0.827310 | 1.679344e-54 | -8.615850e-47 |
| Msa0298500 | Msa1232710 | 0.865359 | 6.253426e-65 | -8.615850e-47 |
| Msa0298500 | Msa1234400 | 0.800144 | 1.654282e-48 | -8.615850e-47 |
| Msa0298500 | Msa1234710 | 0.809068 | 2.271091e-50 | -8.615850e-47 |
| Msa0298500 | Msa1240770 | 0.800403 | 1.465311e-48 | -8.615850e-47 |
| Msa0298500 | Msa1253310 | 0.828096 | 1.087256e-54 | -8.615850e-47 |
| Msa0298500 | Msa1269480 | 0.828752 | 7.547935e-55 | -8.615850e-47 |
| Msa0298500 | Msa1277150 | 0.803680 | 3.105938e-49 | -8.615850e-47 |
| Msa0298500 | Msa1279150 | 0.808722 | 2.693117e-50 | -8.615850e-47 |
| Msa0298500 | Msa1300250 | 0.850711 | 1.423078e-60 | -8.615850e-47 |
| Msa0298500 | Msa1306640 | 0.823569 | 1.290976e-53 | -8.615850e-47 |
| Msa0298500 | Msa1307570 | 0.871679 | 5.688364e-67 | -8.615850e-47 |
| Msa0298500 | Msa1307630 | 0.816594 | 5.101716e-52 | -8.615850e-47 |
| Msa0298500 | Msa1313300 | 0.863931 | 1.749477e-64 | -8.615850e-47 |
| Msa0298500 | Msa1314980 | 0.815392 | 9.463429e-52 | -8.615850e-47 |
| Msa0298500 | Msa1315130 | 0.801353 | 9.370650e-49 | -8.615850e-47 |
| Msa0298500 | Msa1331120 | 0.810668 | 1.028192e-50 | -8.615850e-47 |
| Msa0298500 | Msa1331160 | 0.841715 | 4.016321e-58 | -8.615850e-47 |
| Msa0298500 | Msa1331230 | 0.805246 | 1.464490e-49 | -8.615850e-47 |
| Msa0298500 | Msa1337880 | 0.819169 | 1.337594e-52 | -8.615850e-47 |
| Msa0298500 | Msa1348090 | 0.814128 | 1.804127e-51 | -8.615850e-47 |
| Msa0298500 | Msa1356830 | 0.821785 | 3.357046e-53 | -8.615850e-47 |
| Msa0298500 | Msa1359490 | 0.853287 | 2.640987e-61 | -8.615850e-47 |
| Msa0298500 | Msa1359690 | 0.811125 | 8.185187e-51 | -8.615850e-47 |
| Msa0298500 | Msa1369150 | 0.807932 | 3.970580e-50 | -8.615850e-47 |
| Msa0298500 | Msa1369550 | 0.819284 | 1.259078e-52 | -8.615850e-47 |
| Msa0298500 | Msa1371910 | 0.838874 | 2.218321e-57 | -8.615850e-47 |
| Msa0298500 | Msa1375280 | 0.808083 | 3.686821e-50 | -8.615850e-47 |
| Msa0298500 | Msa1396030 | 0.811723 | 6.069890e-51 | -8.615850e-47 |
| Msa0298500 | Msa1412350 | 0.831070 | 2.055342e-55 | -8.615850e-47 |
| Msa0298500 | Msa1422420 | 0.845230 | 4.623670e-59 | -8.615850e-47 |
| Msa0298500 | Msa1437940 | 0.837404 | 5.302729e-57 | -8.615850e-47 |
| Msa0298500 | Msa1440590 | 0.842009 | 3.357900e-58 | -8.615850e-47 |
| Msa0298500 | Msa1440960 | 0.871587 | 6.099293e-67 | -8.615850e-47 |
| Msa0298500 | Msa1445190 | 0.807111 | 5.928526e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298500 | MtrunA17_Chr2g0322251 | 91.626 | 406 | 14 | 5 | 1 | 389 | 1 | 403 | 0.0 | 646 |
| Msa0298500 | MtrunA17_Chr4g0025311 | 72.063 | 383 | 84 | 5 | 26 | 385 | 39 | 421 | 1.38e-169 | 484 |
| Msa0298500 | MtrunA17_Chr7g0267811 | 69.761 | 377 | 93 | 5 | 26 | 382 | 29 | 404 | 7.22e-160 | 458 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298500 | AT2G35860.1 | 69.786 | 374 | 92 | 6 | 28 | 381 | 33 | 405 | 1.11e-163 | 468 |
| Msa0298500 | AT3G52370.1 | 64.593 | 418 | 125 | 6 | 14 | 409 | 14 | 430 | 9.82e-163 | 465 |
| Msa0298500 | AT3G52370.2 | 64.593 | 418 | 125 | 6 | 14 | 409 | 67 | 483 | 1.65e-162 | 467 |
| Msa0298500 | AT5G06390.1 | 63.196 | 413 | 118 | 6 | 9 | 389 | 14 | 424 | 8.24e-162 | 464 |
| Msa0298500 | AT3G11700.1 | 65.111 | 407 | 106 | 8 | 8 | 378 | 10 | 416 | 1.12e-159 | 459 |
| Msa0298500 | AT5G05650.1 | 52.809 | 89 | 35 | 2 | 302 | 384 | 5 | 92 | 1.73e-24 | 98.2 |
Find 165 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGGATTGTGTTAGGATTTC+AGG | 0.092853 | 2_3:-52532535 | Msa0298500:three_prime_UTR |
| GAGATAATGGCCAGCTATTA+TGG | 0.169252 | 2_3:-52532737 | Msa0298500:three_prime_UTR |
| GCTGATGGGTCGGTTAAATT+TGG | 0.208882 | 2_3:-52534446 | Msa0298500:CDS |
| TAGCTTAATTTCCTTCATTA+TGG | 0.231538 | 2_3:-52532856 | Msa0298500:three_prime_UTR |
| GACTTTGAGGTTGAAGTATA+AGG | 0.267978 | 2_3:-52534483 | Msa0298500:CDS |
| TCAGCTTCTGGTGCACCTTC+TGG | 0.274226 | 2_3:+52534953 | None:intergenic |
| GTTTGATCCGGATATTTATA+CGG | 0.296213 | 2_3:-52534399 | Msa0298500:CDS |
| CGTTCGAGGGCTACGTTGTT+TGG | 0.297594 | 2_3:+52535298 | None:intergenic |
| GGGTTGACCCGGAATGAATT+CGG | 0.310037 | 2_3:+52535185 | None:intergenic |
| TGGTTGGGTAGGATTGTGTT+AGG | 0.315940 | 2_3:-52532543 | Msa0298500:three_prime_UTR |
| TTTGATACTCAGGGATAATA+TGG | 0.322083 | 2_3:+52534558 | None:intergenic |
| CGTGGGAAAGAAGGAGGGTT+TGG | 0.342553 | 2_3:+52535218 | None:intergenic |
| GAGTATAGTTAATTACAATT+AGG | 0.343289 | 2_3:+52532885 | None:intergenic |
| CGGTGGTGACATTTGTTTCA+AGG | 0.344950 | 2_3:+52535131 | None:intergenic |
| CCGGCACCGGCGCCGGGACC+AGG | 0.351903 | 2_3:-52534827 | Msa0298500:CDS |
| TTCCAACCCGAATTCATTCC+GGG | 0.355360 | 2_3:-52535192 | Msa0298500:CDS |
| GAAGATCTCGCTGGAGATAA+TGG | 0.357369 | 2_3:-52532750 | Msa0298500:three_prime_UTR |
| TTCGCCATCGCTTCGTCATT+CGG | 0.363257 | 2_3:+52534635 | None:intergenic |
| GGAGCTAAAGCTTCGTAAAT+CGG | 0.370512 | 2_3:+52534866 | None:intergenic |
| GTGAGTCGAGTAGTGCTATT+AGG | 0.374489 | 2_3:+52535413 | None:intergenic |
| TCTCCGTCGCTAACGACGTT+AGG | 0.380724 | 2_3:+52534702 | None:intergenic |
| AGGATTGTGTTAGGATTTCA+GGG | 0.382082 | 2_3:-52532534 | Msa0298500:three_prime_UTR |
| TTGGAGGGAAAGAATGTTAC+CGG | 0.383221 | 2_3:+52535237 | None:intergenic |
| CAGAAAATCACTTATTGAAT+CGG | 0.386856 | 2_3:+52532464 | None:intergenic |
| CTCTCTTCCGTTTGATACTC+AGG | 0.391445 | 2_3:+52534548 | None:intergenic |
| TGTGCTAGCAGGCATGTAAA+TGG | 0.392327 | 2_3:+52532833 | None:intergenic |
| CCTGGTCCCGGCGCCGGTGC+CGG | 0.396680 | 2_3:+52534827 | None:intergenic |
| ATCAAGACATTACTGCATTA+CGG | 0.398489 | 2_3:-52534758 | Msa0298500:CDS |
| GGTTGACCCGGAATGAATTC+GGG | 0.399152 | 2_3:+52535186 | None:intergenic |
| GCAAGCTATCACTTTCTTTG+TGG | 0.399718 | 2_3:-52532949 | Msa0298500:three_prime_UTR |
| TCGGGTCGGGTTATATCATT+CGG | 0.404455 | 2_3:+52535073 | None:intergenic |
| ATTTCTGTTCAAGGGATTGA+TGG | 0.407728 | 2_3:-52534368 | Msa0298500:CDS |
| GTCGGGTTATTTGTTTGATC+CGG | 0.419309 | 2_3:-52534411 | Msa0298500:CDS |
| TTTGGAGATGGTGATGGGTC+GGG | 0.422793 | 2_3:-52534428 | Msa0298500:CDS |
| GAAGTATAAGGTTGTGGCTC+AGG | 0.427357 | 2_3:-52534471 | Msa0298500:CDS |
| GTTTCTTGCAGGGAAACTAC+TGG | 0.441861 | 2_3:-52533097 | Msa0298500:intron |
| ATTCCAACCCGAATTCATTC+CGG | 0.442125 | 2_3:-52535193 | Msa0298500:CDS |
| ACTAGCTCCGGCACCGGCGC+CGG | 0.447734 | 2_3:-52534834 | Msa0298500:CDS |
| AGATAATGGCCAGCTATTAT+GGG | 0.450219 | 2_3:-52532736 | Msa0298500:three_prime_UTR |
| CTCCCATCCGTATAAATATC+CGG | 0.451181 | 2_3:+52534392 | None:intergenic |
| CTAGCTCCGGCACCGGCGCC+GGG | 0.452261 | 2_3:-52534833 | Msa0298500:CDS |
| AGAGGTTGTGCCGGTGGAGC+GGG | 0.452605 | 2_3:-52534321 | Msa0298500:intron |
| AAGTGATGGTGTGGTCCTCC+TGG | 0.454718 | 2_3:+52534809 | None:intergenic |
| GATGCAGATTCACGGATTGA+TGG | 0.458907 | 2_3:-52532804 | Msa0298500:three_prime_UTR |
| AGGTTAGTTATGAGACTTTG+AGG | 0.459291 | 2_3:-52534496 | Msa0298500:CDS |
| GAAACAGCATGCTGGATGCT+TGG | 0.462414 | 2_3:-52533075 | Msa0298500:CDS |
| GACGGAGGAGTTAAGTGAAC+CGG | 0.462493 | 2_3:-52534606 | Msa0298500:CDS |
| CTTTCATTATTTCCTTCATG+TGG | 0.463243 | 2_3:-52532674 | Msa0298500:three_prime_UTR |
| GGTCGGAGATGGATTTAAAA+CGG | 0.463637 | 2_3:+52535164 | None:intergenic |
| ACAACCTCTTTCTCCTTCAC+AGG | 0.465712 | 2_3:+52534335 | None:intergenic |
| TGAAGATGAAGAAGAAAGAA+TGG | 0.466374 | 2_3:+52535468 | None:intergenic |
| GTCGGAGATGGATTTAAAAC+GGG | 0.466422 | 2_3:+52535165 | None:intergenic |
| CATGCTTTGATGCAGATTCA+CGG | 0.471288 | 2_3:-52532812 | Msa0298500:three_prime_UTR |
| GGAATCTCCGGTGGTGAGCC+TGG | 0.473704 | 2_3:+52534887 | None:intergenic |
| GTTTCTCCAATGTCATGGTT+GGG | 0.475428 | 2_3:-52532558 | Msa0298500:three_prime_UTR |
| TTGGAATGACGTGGGAAAGA+AGG | 0.479877 | 2_3:+52535209 | None:intergenic |
| ATTTGGAGATGGTGATGGGT+CGG | 0.483121 | 2_3:-52534429 | Msa0298500:CDS |
| GGTCCTCCTGGTCCCGGCGC+CGG | 0.483483 | 2_3:+52534821 | None:intergenic |
| CGGGTCGGGTTATATCATTC+GGG | 0.484603 | 2_3:+52535074 | None:intergenic |
| TTGTTTCAAGGTGGAGGTGA+TGG | 0.485636 | 2_3:+52535143 | None:intergenic |
| GTTAAATTTGGAGATGGTGA+TGG | 0.487142 | 2_3:-52534434 | Msa0298500:CDS |
| ATGGATGACACCGTCGGGTC+GGG | 0.489214 | 2_3:+52535060 | None:intergenic |
| TTACGGTGGTTACAACGAAA+TGG | 0.489351 | 2_3:-52534741 | Msa0298500:CDS |
| TTGGTTAACCGTGAATTCTC+CGG | 0.490152 | 2_3:+52535111 | None:intergenic |
| GGATTTAAAACGGGTTGACC+CGG | 0.492810 | 2_3:+52535174 | None:intergenic |
| GTTTCCTGTGAAGGAGAAAG+AGG | 0.494382 | 2_3:-52534339 | Msa0298500:CDS |
| TGTTTCTCCAATGTCATGGT+TGG | 0.496530 | 2_3:-52532559 | Msa0298500:three_prime_UTR |
| TTTCTGTTCAAGGGATTGAT+GGG | 0.497867 | 2_3:-52534367 | Msa0298500:CDS |
| TTGTTGTAATACAACATGCC+TGG | 0.498795 | 2_3:-52532408 | Msa0298500:three_prime_UTR |
| GCATCAAAGCATGTGCTAGC+AGG | 0.498922 | 2_3:+52532822 | None:intergenic |
| TCTTATCCCACGCGCCGTTG+TGG | 0.500691 | 2_3:-52535023 | Msa0298500:CDS |
| CTCCAATGTCATGGTTGGGT+AGG | 0.503101 | 2_3:-52532554 | Msa0298500:three_prime_UTR |
| TGGTGTGGTCCTCCTGGTCC+CGG | 0.504688 | 2_3:+52534815 | None:intergenic |
| TTTGAGTTTATTTGACTCGT+TGG | 0.508685 | 2_3:+52535442 | None:intergenic |
| CATGTAAATGGCCATAATGA+AGG | 0.508714 | 2_3:+52532845 | None:intergenic |
| CTGGGTCAAGGTTACGTTCG+AGG | 0.510106 | 2_3:+52535284 | None:intergenic |
| ATCCGGATATTTATACGGAT+GGG | 0.511243 | 2_3:-52534394 | Msa0298500:CDS |
| TTTGCTCACTCGTCTATGAC+TGG | 0.514203 | 2_3:+52532647 | None:intergenic |
| TTAAATTTGGAGATGGTGAT+GGG | 0.514625 | 2_3:-52534433 | Msa0298500:CDS |
| ATTATCTCCTCCGGTGAACC+CGG | 0.518780 | 2_3:+52534587 | None:intergenic |
| TGGTAATACATTATCTCCTC+CGG | 0.519375 | 2_3:+52534578 | None:intergenic |
| GATCCGGATATTTATACGGA+TGG | 0.520456 | 2_3:-52534395 | Msa0298500:CDS |
| GGGAAAGAAGGAGGGTTTGG+AGG | 0.521931 | 2_3:+52535221 | None:intergenic |
| GTTAAGTGAACCGGGTTCAC+CGG | 0.522544 | 2_3:-52534597 | Msa0298500:CDS |
| TGTCACCACCGGAGAATTCA+CGG | 0.524522 | 2_3:-52535119 | Msa0298500:intron |
| GAGGTTGAAGTATAAGGTTG+TGG | 0.525041 | 2_3:-52534477 | Msa0298500:CDS |
| GATGGGAGGATTTCTGTTCA+AGG | 0.525174 | 2_3:-52534377 | Msa0298500:CDS |
| GATGAGTCGTTTAGTTTCAG+AGG | 0.525245 | 2_3:-52534681 | Msa0298500:CDS |
| GAATGACGTGGGAAAGAAGG+AGG | 0.525282 | 2_3:+52535212 | None:intergenic |
| GTGGAGGTGATGGTCGGAGA+TGG | 0.529825 | 2_3:+52535153 | None:intergenic |
| GCTTCGTAAATCGGAATCTC+CGG | 0.530135 | 2_3:+52534875 | None:intergenic |
| TGACATTTGTTTCAAGGTGG+AGG | 0.534765 | 2_3:+52535137 | None:intergenic |
| GATTTACGAAGCTTTAGCTC+CGG | 0.534959 | 2_3:-52534864 | Msa0298500:CDS |
| ATGGGAGGATTTCTGTTCAA+GGG | 0.537140 | 2_3:-52534376 | Msa0298500:CDS |
| AAATAAATAATTGCCTAGCC+AGG | 0.537622 | 2_3:+52532390 | None:intergenic |
| AAAATCACACCCATAATAGC+TGG | 0.538570 | 2_3:+52532727 | None:intergenic |
| ATGGGTTTAACCCGCTCCAC+CGG | 0.539798 | 2_3:+52534311 | None:intergenic |
| TCCGGGACCATCACTAGCTC+CGG | 0.541984 | 2_3:-52534846 | Msa0298500:CDS |
| ATCCTACCCAACCATGACAT+TGG | 0.543910 | 2_3:+52532552 | None:intergenic |
| ATTTACGAAGCTTTAGCTCC+GGG | 0.544102 | 2_3:-52534863 | Msa0298500:CDS |
| AACTACTGGAAACAGCATGC+TGG | 0.545401 | 2_3:-52533083 | Msa0298500:CDS |
| TTCGTCATTCGGAGCCAAAA+CGG | 0.545758 | 2_3:+52534646 | None:intergenic |
| ACCATCACTAGCTCCGGCAC+CGG | 0.548054 | 2_3:-52534840 | Msa0298500:CDS |
| GTCGGGTTATATCATTCGGG+TGG | 0.548723 | 2_3:+52535077 | None:intergenic |
| GCCGGTGCCGGAGCTAGTGA+TGG | 0.548941 | 2_3:+52534839 | None:intergenic |
| GTAATACAACATGCCTGGCT+AGG | 0.550965 | 2_3:-52532403 | Msa0298500:three_prime_UTR |
| AAATCATCCACAACGGCGCG+TGG | 0.552381 | 2_3:+52535016 | None:intergenic |
| GAATCTAGAATGGTTACTAA+AGG | 0.552638 | 2_3:+52533050 | None:intergenic |
| GACAAGAGGTGAATCTAGAA+TGG | 0.557132 | 2_3:+52533040 | None:intergenic |
| AGAATGTTTCTCCAATGTCA+TGG | 0.557995 | 2_3:-52532563 | Msa0298500:three_prime_UTR |
| GGAAAGAAGGAGGGTTTGGA+GGG | 0.560562 | 2_3:+52535222 | None:intergenic |
| CAACGGAGAGTTACAAGTGA+AGG | 0.561843 | 2_3:-52534786 | Msa0298500:CDS |
| GGAGAAAGAGGTTGTGCCGG+TGG | 0.563868 | 2_3:-52534327 | Msa0298500:CDS |
| GGGAAAGAATGTTACCGGGT+TGG | 0.564238 | 2_3:+52535242 | None:intergenic |
| CGACCCGACGGTGTCATCCA+TGG | 0.564330 | 2_3:-52535058 | Msa0298500:CDS |
| GTAACTCTCCGTTGAAGTGA+TGG | 0.564664 | 2_3:+52534795 | None:intergenic |
| GAAGAAGAATGCAAGAGATG+TGG | 0.565434 | 2_3:+52535506 | None:intergenic |
| TTCTGTTCAAGGGATTGATG+GGG | 0.568281 | 2_3:-52534366 | Msa0298500:CDS |
| AAGAGGTTGTGCCGGTGGAG+CGG | 0.568322 | 2_3:-52534322 | Msa0298500:CDS |
| TATTATCCCTGAGTATCAAA+CGG | 0.570877 | 2_3:-52534555 | Msa0298500:CDS |
| GACCCGGAATGAATTCGGGT+TGG | 0.576584 | 2_3:+52535190 | None:intergenic |
| GCAAGAGATGTGGTGAGCCA+TGG | 0.577847 | 2_3:+52535516 | None:intergenic |
| TCTCTTCCGTTTGATACTCA+GGG | 0.578898 | 2_3:+52534549 | None:intergenic |
| ATGACTGGAAATCCACATGA+AGG | 0.581767 | 2_3:+52532662 | None:intergenic |
| ATGAGTCGTTTAGTTTCAGA+GGG | 0.585089 | 2_3:-52534680 | Msa0298500:CDS |
| GCCGGAGCTAGTGATGGTCC+CGG | 0.586394 | 2_3:+52534845 | None:intergenic |
| TGGGTCAAGGTTACGTTCGA+GGG | 0.587090 | 2_3:+52535285 | None:intergenic |
| TTCAAGGTGGAGGTGATGGT+CGG | 0.587520 | 2_3:+52535147 | None:intergenic |
| AATGACGTGGGAAAGAAGGA+GGG | 0.592437 | 2_3:+52535213 | None:intergenic |
| GGCTCAGGAAGCTGATGGGT+CGG | 0.592530 | 2_3:-52534456 | Msa0298500:CDS |
| ATCGAATATGAAGATCTCGC+TGG | 0.595531 | 2_3:-52532759 | Msa0298500:three_prime_UTR |
| GTTGTGGCTCAGGAAGCTGA+TGG | 0.599967 | 2_3:-52534461 | Msa0298500:CDS |
| AAACCTAACGTCGTTAGCGA+CGG | 0.600354 | 2_3:-52534705 | Msa0298500:CDS |
| ATACCATGGATGACACCGTC+GGG | 0.600581 | 2_3:+52535055 | None:intergenic |
| GGCTCCGAATGACGAAGCGA+TGG | 0.605326 | 2_3:-52534639 | Msa0298500:CDS |
| CATGGATGACACCGTCGGGT+CGG | 0.608376 | 2_3:+52535059 | None:intergenic |
| TGGTGACATTTGTTTCAAGG+TGG | 0.611092 | 2_3:+52535134 | None:intergenic |
| CGGATATTTATACGGATGGG+AGG | 0.612456 | 2_3:-52534391 | Msa0298500:CDS |
| GGGTCGGTTAAATTTGGAGA+TGG | 0.613917 | 2_3:-52534440 | Msa0298500:CDS |
| TTGTGGCTCAGGAAGCTGAT+GGG | 0.614094 | 2_3:-52534460 | Msa0298500:CDS |
| TGGAGGGAAAGAATGTTACC+GGG | 0.615457 | 2_3:+52535238 | None:intergenic |
| AATCATCCACAACGGCGCGT+GGG | 0.616636 | 2_3:+52535017 | None:intergenic |
| GCACCGGCGCCGGGACCAGG+AGG | 0.618074 | 2_3:-52534824 | Msa0298500:CDS |
| TCGGGTTATATCATTCGGGT+GGG | 0.618173 | 2_3:+52535078 | None:intergenic |
| CTTGAAACAAATGTCACCAC+CGG | 0.625752 | 2_3:-52535130 | Msa0298500:CDS |
| AATACCATGGATGACACCGT+CGG | 0.625914 | 2_3:+52535054 | None:intergenic |
| GTTAACCGTGAATTCTCCGG+TGG | 0.626086 | 2_3:+52535114 | None:intergenic |
| GGACCACACCATCACTTCAA+CGG | 0.630152 | 2_3:-52534803 | Msa0298500:CDS |
| AAACACTTTCTTCTCCAACC+CGG | 0.635314 | 2_3:-52535256 | Msa0298500:CDS |
| TCGTAAATCGGAATCTCCGG+TGG | 0.643713 | 2_3:+52534878 | None:intergenic |
| GAAGGAGAAAGAGGTTGTGC+CGG | 0.644032 | 2_3:-52534330 | Msa0298500:CDS |
| ACGGAGGAGTTAAGTGAACC+GGG | 0.650333 | 2_3:-52534605 | Msa0298500:CDS |
| TAGCAAAGTTCCTTAAAACA+AGG | 0.656653 | 2_3:-52532989 | Msa0298500:CDS |
| ATCACCGCCGTAAAACCAGA+AGG | 0.658490 | 2_3:-52534968 | Msa0298500:CDS |
| AATGATATAACCCGACCCGA+CGG | 0.660973 | 2_3:-52535070 | Msa0298500:CDS |
| GAATTCGGGTTGGAATGACG+TGG | 0.662643 | 2_3:+52535200 | None:intergenic |
| AAGTGAACCGGGTTCACCGG+AGG | 0.679744 | 2_3:-52534594 | Msa0298500:CDS |
| AATTCGGGTTGGAATGACGT+GGG | 0.684805 | 2_3:+52535201 | None:intergenic |
| CGGTGGTTACAACGAAATGG+CGG | 0.694396 | 2_3:-52534738 | Msa0298500:CDS |
| TCTCCGTTGAAGTGATGGTG+TGG | 0.694919 | 2_3:+52534800 | None:intergenic |
| AAGACATTACTGCATTACGG+TGG | 0.719316 | 2_3:-52534755 | Msa0298500:CDS |
| GTTGTTGAAATCATCCACAA+CGG | 0.726941 | 2_3:+52535009 | None:intergenic |
| AGCGATGGCGAAGTTAACGA+CGG | 0.738702 | 2_3:-52534624 | Msa0298500:CDS |
| TGATTGAACGGAGACTACGA+CGG | 0.741413 | 2_3:+52534987 | None:intergenic |
| GATGGCGAAGTTAACGACGG+AGG | 0.771561 | 2_3:-52534621 | Msa0298500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAAAAATCTTCAC+CGG | - | chr2_3:52532995-52533014 | Msa0298500:CDS | 15.0% |
| !! | ATCTTTAATATCTTTAACTA+TGG | - | chr2_3:52533742-52533761 | Msa0298500:intron | 15.0% |
| !! | AAAATGAATTATATGAAATC+AGG | - | chr2_3:52534179-52534198 | Msa0298500:intron | 15.0% |
| !! | AAATGAATTATATGAAATCA+GGG | - | chr2_3:52534180-52534199 | Msa0298500:intron | 15.0% |
| !!! | ATAAAATTTTACATCATAGA+AGG | - | chr2_3:52534520-52534539 | Msa0298500:intron | 15.0% |
| !! | TAAAGATCAAAATTATGCAT+TGG | + | chr2_3:52533729-52533748 | None:intergenic | 20.0% |
| !! | AAATTACATAATACTTGGAT+CGG | + | chr2_3:52534296-52534315 | None:intergenic | 20.0% |
| !! | ATCCAAGTATTATGTAATTT+AGG | - | chr2_3:52534296-52534315 | Msa0298500:intron | 20.0% |
| !! | ATTTCTAATACAAATAGGAA+AGG | + | chr2_3:52534381-52534400 | None:intergenic | 20.0% |
| !! | TGTACATTTCTAATACAAAT+AGG | + | chr2_3:52534386-52534405 | None:intergenic | 20.0% |
| !! | GAGTATAGTTAATTACAATT+AGG | + | chr2_3:52535028-52535047 | None:intergenic | 20.0% |
| !! | TAAGAATTTTCTGAATACCA+TGG | + | chr2_3:52532872-52532891 | None:intergenic | 25.0% |
| !! | ATCAATTAGGTCATTCATTT+TGG | + | chr2_3:52533694-52533713 | None:intergenic | 25.0% |
| ! | ACTGCAAGTAATTATAAACT+AGG | - | chr2_3:52533788-52533807 | Msa0298500:intron | 25.0% |
| !!! | AGAATAGTTTTGTGGTTTTA+TGG | - | chr2_3:52534044-52534063 | Msa0298500:intron | 25.0% |
| ! | TATAAAGTAGTGTCTTCAAT+TGG | - | chr2_3:52534107-52534126 | Msa0298500:intron | 25.0% |
| ! | ATAAAGTAGTGTCTTCAATT+GGG | - | chr2_3:52534108-52534127 | Msa0298500:intron | 25.0% |
| ! | AGCCTAAATTACATAATACT+TGG | + | chr2_3:52534301-52534320 | None:intergenic | 25.0% |
| ! | TAGTTAATAGTTACTACTGA+TGG | - | chr2_3:52534326-52534345 | Msa0298500:CDS | 25.0% |
| !! | TACATGTTGAACTTTAAGAA+CGG | - | chr2_3:52534402-52534421 | Msa0298500:CDS | 25.0% |
| ! | TTAAACTGGAATATACATGA+AGG | + | chr2_3:52534587-52534606 | None:intergenic | 25.0% |
| ! | TTAAAAATAGACCAACCATA+TGG | - | chr2_3:52534603-52534622 | Msa0298500:CDS | 25.0% |
| ! | GTTGAAGAGATTTAATAGTT+AGG | + | chr2_3:52534670-52534689 | None:intergenic | 25.0% |
| ! | TAAATCTCTTCAACTAGAAT+TGG | - | chr2_3:52534676-52534695 | Msa0298500:CDS | 25.0% |
| !!! | TTTAATGTTTCTCTAAGGTT+TGG | - | chr2_3:52534742-52534761 | Msa0298500:CDS | 25.0% |
| !! | CTCTTGTAATTTAAAACTGA+TGG | - | chr2_3:52534783-52534802 | Msa0298500:CDS | 25.0% |
| !!! | TTGTTCAATACCTTGTTTTA+AGG | + | chr2_3:52534934-52534953 | None:intergenic | 25.0% |
| ! | TAGCTTAATTTCCTTCATTA+TGG | - | chr2_3:52535054-52535073 | Msa0298500:CDS | 25.0% |
| ! | AAAGAGCAAAACAAAAATGT+GGG | + | chr2_3:52535209-52535228 | None:intergenic | 25.0% |
| ! | AAAAGAGCAAAACAAAAATG+TGG | + | chr2_3:52535210-52535229 | None:intergenic | 25.0% |
| ! | CAGAAAATCACTTATTGAAT+CGG | + | chr2_3:52535449-52535468 | None:intergenic | 25.0% |
| TGAAGATGAAGAAGAAAGAA+TGG | + | chr2_3:52532445-52532464 | None:intergenic | 30.0% | |
| ! | TTTGAGTTTATTTGACTCGT+TGG | + | chr2_3:52532471-52532490 | None:intergenic | 30.0% |
| !! | TGTTTTCTAGTGTTTGTAAG+AGG | + | chr2_3:52532560-52532579 | None:intergenic | 30.0% |
| !! | GAAGAAAGTGTTTGAAATCT+GGG | + | chr2_3:52532647-52532666 | None:intergenic | 30.0% |
| !! | AGAAGAAAGTGTTTGAAATC+TGG | + | chr2_3:52532648-52532667 | None:intergenic | 30.0% |
| ATCAAGACATTACTGCATTA+CGG | - | chr2_3:52533152-52533171 | Msa0298500:intron | 30.0% | |
| TTTGATACTCAGGGATAATA+TGG | + | chr2_3:52533355-52533374 | None:intergenic | 30.0% | |
| TATTATCCCTGAGTATCAAA+CGG | - | chr2_3:52533355-52533374 | Msa0298500:intron | 30.0% | |
| AGAGTATGTATAATGCTGTT+AGG | - | chr2_3:52533381-52533400 | Msa0298500:intron | 30.0% | |
| TATAATGCTGTTAGGAGATT+TGG | - | chr2_3:52533389-52533408 | Msa0298500:intron | 30.0% | |
| ATAATGCTGTTAGGAGATTT+GGG | - | chr2_3:52533390-52533409 | Msa0298500:intron | 30.0% | |
| TTAAATTTGGAGATGGTGAT+GGG | - | chr2_3:52533477-52533496 | Msa0298500:intron | 30.0% | |
| GTTTGATCCGGATATTTATA+CGG | - | chr2_3:52533511-52533530 | Msa0298500:intron | 30.0% | |
| ! | TTCTTTTGTTCCTTTAGACT+AGG | - | chr2_3:52533883-52533902 | Msa0298500:intron | 30.0% |
| !!! | CAGTTTTGTTTTATGAGTGA+TGG | - | chr2_3:52533953-52533972 | Msa0298500:intron | 30.0% |
| AAAACAAACAAACCAGAACA+AGG | + | chr2_3:52533993-52534012 | None:intergenic | 30.0% | |
| !!! | TCTGGTTTGTTTGTTTTAGT+AGG | - | chr2_3:52533996-52534015 | Msa0298500:intron | 30.0% |
| !! | GAAACTTGAGAATAGTTTTG+TGG | - | chr2_3:52534036-52534055 | Msa0298500:intron | 30.0% |
| ! | CATTCACAATTTGAAGTTGT+AGG | + | chr2_3:52534070-52534089 | None:intergenic | 30.0% |
| CTACAACTTCAAATTGTGAA+TGG | - | chr2_3:52534068-52534087 | Msa0298500:intron | 30.0% | |
| !!! | TTTTGAAGTTGTTGACTTGA+TGG | - | chr2_3:52534259-52534278 | Msa0298500:intron | 30.0% |
| ! | GCAAAAAAAGATCGACATTT+TGG | - | chr2_3:52534495-52534514 | Msa0298500:CDS | 30.0% |
| !!! | TGGTTGGTCTATTTTTAAAC+TGG | + | chr2_3:52534601-52534620 | None:intergenic | 30.0% |
| GTCATAAGTGTGAAATGTAA+TGG | - | chr2_3:52534629-52534648 | Msa0298500:CDS | 30.0% | |
| GGTTGTTTAATGTTTCTCTA+AGG | - | chr2_3:52534737-52534756 | Msa0298500:CDS | 30.0% | |
| ! | GAATCTAGAATGGTTACTAA+AGG | + | chr2_3:52534863-52534882 | None:intergenic | 30.0% |
| !!! | AAAAACCCCACGTTTTTTTA+TGG | - | chr2_3:52534897-52534916 | Msa0298500:CDS | 30.0% |
| TAGCAAAGTTCCTTAAAACA+AGG | - | chr2_3:52534921-52534940 | Msa0298500:CDS | 30.0% | |
| CTTTCATTATTTCCTTCATG+TGG | - | chr2_3:52535236-52535255 | Msa0298500:CDS | 30.0% | |
| ! | CGATTCAATAAGTGATTTTC+TGG | - | chr2_3:52535447-52535466 | Msa0298500:CDS | 30.0% |
| !! | AAGTGATTTTCTGGAAAAAG+TGG | - | chr2_3:52535456-52535475 | Msa0298500:CDS | 30.0% |
| !!! | GTTTGCTTTTTCGATTAGGT+AGG | + | chr2_3:52532538-52532557 | None:intergenic | 35.0% |
| !!! | AGAGGTTTGCTTTTTCGATT+AGG | + | chr2_3:52532542-52532561 | None:intergenic | 35.0% |
| GTTGTTGAAATCATCCACAA+CGG | + | chr2_3:52532904-52532923 | None:intergenic | 35.0% | |
| ! | AATTTTCTTGTGTCAGCTTC+TGG | + | chr2_3:52532972-52532991 | None:intergenic | 35.0% |
| ! | ATGAGTCGTTTAGTTTCAGA+GGG | - | chr2_3:52533230-52533249 | Msa0298500:intron | 35.0% |
| !!! | GGGTTATGTTTTAACCGTTT+TGG | - | chr2_3:52533250-52533269 | Msa0298500:intron | 35.0% |
| TGGTAATACATTATCTCCTC+CGG | + | chr2_3:52533335-52533354 | None:intergenic | 35.0% | |
| ! | AGGTTAGTTATGAGACTTTG+AGG | - | chr2_3:52533414-52533433 | Msa0298500:intron | 35.0% |
| !! | GACTTTGAGGTTGAAGTATA+AGG | - | chr2_3:52533427-52533446 | Msa0298500:intron | 35.0% |
| GTTAAATTTGGAGATGGTGA+TGG | - | chr2_3:52533476-52533495 | Msa0298500:intron | 35.0% | |
| ATCCGGATATTTATACGGAT+GGG | - | chr2_3:52533516-52533535 | Msa0298500:intron | 35.0% | |
| ATTTCTGTTCAAGGGATTGA+TGG | - | chr2_3:52533542-52533561 | Msa0298500:intron | 35.0% | |
| TTTCTGTTCAAGGGATTGAT+GGG | - | chr2_3:52533543-52533562 | Msa0298500:intron | 35.0% | |
| GTTAAACCCATTTCGATGAT+GGG | - | chr2_3:52533611-52533630 | Msa0298500:intron | 35.0% | |
| TTATGAGTGATGGTATTGTG+TGG | - | chr2_3:52533963-52533982 | Msa0298500:intron | 35.0% | |
| ! | GAACTTTAAGAACGGTGAAA+TGG | - | chr2_3:52534410-52534429 | Msa0298500:CDS | 35.0% |
| TTAAGAACGGTGAAATGGAA+TGG | - | chr2_3:52534415-52534434 | Msa0298500:CDS | 35.0% | |
| ! | CTACACTAAGAGTACATCAA+AGG | + | chr2_3:52534474-52534493 | None:intergenic | 35.0% |
| CTTATGACTTACCATATGGT+TGG | + | chr2_3:52534617-52534636 | None:intergenic | 35.0% | |
| CACACTTATGACTTACCATA+TGG | + | chr2_3:52534621-52534640 | None:intergenic | 35.0% | |
| TGTATTGTGACTGACAGTAT+TGG | - | chr2_3:52534716-52534735 | Msa0298500:CDS | 35.0% | |
| ATGGAATGAATGTTTCTTGC+AGG | - | chr2_3:52534802-52534821 | Msa0298500:CDS | 35.0% | |
| TGGAATGAATGTTTCTTGCA+GGG | - | chr2_3:52534803-52534822 | Msa0298500:CDS | 35.0% | |
| TGCTAGCCATAAAAAAACGT+GGG | + | chr2_3:52534906-52534925 | None:intergenic | 35.0% | |
| TTGCTAGCCATAAAAAAACG+TGG | + | chr2_3:52534907-52534926 | None:intergenic | 35.0% | |
| CATGTAAATGGCCATAATGA+AGG | + | chr2_3:52535068-52535087 | None:intergenic | 35.0% | |
| ! | AGATAATGGCCAGCTATTAT+GGG | - | chr2_3:52535174-52535193 | Msa0298500:CDS | 35.0% |
| AAAATCACACCCATAATAGC+TGG | + | chr2_3:52535186-52535205 | None:intergenic | 35.0% | |
| AGAATGTTTCTCCAATGTCA+TGG | - | chr2_3:52535347-52535366 | Msa0298500:CDS | 35.0% | |
| TAGGATTGTGTTAGGATTTC+AGG | - | chr2_3:52535375-52535394 | Msa0298500:CDS | 35.0% | |
| AGGATTGTGTTAGGATTTCA+GGG | - | chr2_3:52535376-52535395 | Msa0298500:CDS | 35.0% | |
| ATCAAAAATGGTTCAATGCC+TGG | + | chr2_3:52535417-52535436 | None:intergenic | 35.0% | |
| !! | GGCATTGAACCATTTTTGAT+AGG | - | chr2_3:52535417-52535436 | Msa0298500:CDS | 35.0% |
| TTGTTGTAATACAACATGCC+TGG | - | chr2_3:52535502-52535521 | Msa0298500:CDS | 35.0% | |
| GAAGAAGAATGCAAGAGATG+TGG | + | chr2_3:52532407-52532426 | None:intergenic | 40.0% | |
| ! | AGTGTTTGAAATCTGGGTCA+AGG | + | chr2_3:52532641-52532660 | None:intergenic | 40.0% |
| AAACACTTTCTTCTCCAACC+CGG | - | chr2_3:52532654-52532673 | Msa0298500:three_prime_UTR | 40.0% | |
| TTGGAGGGAAAGAATGTTAC+CGG | + | chr2_3:52532676-52532695 | None:intergenic | 40.0% | |
| ATTCCAACCCGAATTCATTC+CGG | - | chr2_3:52532717-52532736 | Msa0298500:three_prime_UTR | 40.0% | |
| ! | GTCGGAGATGGATTTAAAAC+GGG | + | chr2_3:52532748-52532767 | None:intergenic | 40.0% |
| ! | GGTCGGAGATGGATTTAAAA+CGG | + | chr2_3:52532749-52532768 | None:intergenic | 40.0% |
| TGACATTTGTTTCAAGGTGG+AGG | + | chr2_3:52532776-52532795 | None:intergenic | 40.0% | |
| TGGTGACATTTGTTTCAAGG+TGG | + | chr2_3:52532779-52532798 | None:intergenic | 40.0% | |
| CTTGAAACAAATGTCACCAC+CGG | - | chr2_3:52532780-52532799 | Msa0298500:three_prime_UTR | 40.0% | |
| TTGGTTAACCGTGAATTCTC+CGG | + | chr2_3:52532802-52532821 | None:intergenic | 40.0% | |
| ATTCACGGTTAACCAAGAGA+AGG | - | chr2_3:52532806-52532825 | Msa0298500:three_prime_UTR | 40.0% | |
| AAATCTTCACCGGAAAAACC+AGG | - | chr2_3:52533005-52533024 | Msa0298500:CDS | 40.0% | |
| GGAGCTAAAGCTTCGTAAAT+CGG | + | chr2_3:52533047-52533066 | None:intergenic | 40.0% | |
| ! | GATTTACGAAGCTTTAGCTC+CGG | - | chr2_3:52533046-52533065 | Msa0298500:CDS | 40.0% |
| ! | ATTTACGAAGCTTTAGCTCC+GGG | - | chr2_3:52533047-52533066 | Msa0298500:CDS | 40.0% |
| AAGACATTACTGCATTACGG+TGG | - | chr2_3:52533155-52533174 | Msa0298500:intron | 40.0% | |
| TTACGGTGGTTACAACGAAA+TGG | - | chr2_3:52533169-52533188 | Msa0298500:intron | 40.0% | |
| ! | GATGAGTCGTTTAGTTTCAG+AGG | - | chr2_3:52533229-52533248 | Msa0298500:intron | 40.0% |
| TCTCTTCCGTTTGATACTCA+GGG | + | chr2_3:52533364-52533383 | None:intergenic | 40.0% | |
| GAGGTTGAAGTATAAGGTTG+TGG | - | chr2_3:52533433-52533452 | Msa0298500:intron | 40.0% | |
| GTCGGGTTATTTGTTTGATC+CGG | - | chr2_3:52533499-52533518 | Msa0298500:intron | 40.0% | |
| GATCCGGATATTTATACGGA+TGG | - | chr2_3:52533515-52533534 | Msa0298500:intron | 40.0% | |
| CTCCCATCCGTATAAATATC+CGG | + | chr2_3:52533521-52533540 | None:intergenic | 40.0% | |
| ATGGGAGGATTTCTGTTCAA+GGG | - | chr2_3:52533534-52533553 | Msa0298500:intron | 40.0% | |
| TTCTGTTCAAGGGATTGATG+GGG | - | chr2_3:52533544-52533563 | Msa0298500:intron | 40.0% | |
| GGTTAAACCCATTTCGATGA+TGG | - | chr2_3:52533610-52533629 | Msa0298500:intron | 40.0% | |
| ATGACCTAATTGATTGTCGC+AGG | - | chr2_3:52533700-52533719 | Msa0298500:intron | 40.0% | |
| GAAACCTGCGACAATCAATT+AGG | + | chr2_3:52533707-52533726 | None:intergenic | 40.0% | |
| TTGTTCCTTTAGACTAGGAG+AGG | - | chr2_3:52533888-52533907 | Msa0298500:intron | 40.0% | |
| ! | GGAGATGATAGTGATGTGTT+TGG | - | chr2_3:52533909-52533928 | Msa0298500:intron | 40.0% |
| ! | ATGATAGTGATGTGTTTGGC+TGG | - | chr2_3:52533913-52533932 | Msa0298500:intron | 40.0% |
| GACAAGAGGTGAATCTAGAA+TGG | + | chr2_3:52534873-52534892 | None:intergenic | 40.0% | |
| ! | TGGGGTTTTTCATTGACAAG+AGG | + | chr2_3:52534887-52534906 | None:intergenic | 40.0% |
| GCTAGCCATAAAAAAACGTG+GGG | + | chr2_3:52534905-52534924 | None:intergenic | 40.0% | |
| GCAAGCTATCACTTTCTTTG+TGG | - | chr2_3:52534961-52534980 | Msa0298500:CDS | 40.0% | |
| CATGCTTTGATGCAGATTCA+CGG | - | chr2_3:52535098-52535117 | Msa0298500:intron | 40.0% | |
| ATCGAATATGAAGATCTCGC+TGG | - | chr2_3:52535151-52535170 | Msa0298500:CDS | 40.0% | |
| ! | GAGATAATGGCCAGCTATTA+TGG | - | chr2_3:52535173-52535192 | Msa0298500:CDS | 40.0% |
| ATGACTGGAAATCCACATGA+AGG | + | chr2_3:52535251-52535270 | None:intergenic | 40.0% | |
| TGTTTCTCCAATGTCATGGT+TGG | - | chr2_3:52535351-52535370 | Msa0298500:CDS | 40.0% | |
| GTTTCTCCAATGTCATGGTT+GGG | - | chr2_3:52535352-52535371 | Msa0298500:CDS | 40.0% | |
| !!! | GGGTTTTTTGAACTGTAACC+AGG | - | chr2_3:52535396-52535415 | Msa0298500:CDS | 40.0% |
| ! | GTGAGTCGAGTAGTGCTATT+AGG | + | chr2_3:52532500-52532519 | None:intergenic | 45.0% |
| TGGAGGGAAAGAATGTTACC+GGG | + | chr2_3:52532675-52532694 | None:intergenic | 45.0% | |
| AATGACGTGGGAAAGAAGGA+GGG | + | chr2_3:52532700-52532719 | None:intergenic | 45.0% | |
| TTGGAATGACGTGGGAAAGA+AGG | + | chr2_3:52532704-52532723 | None:intergenic | 45.0% | |
| !! | AATTCGGGTTGGAATGACGT+GGG | + | chr2_3:52532712-52532731 | None:intergenic | 45.0% |
| TTCCAACCCGAATTCATTCC+GGG | - | chr2_3:52532718-52532737 | Msa0298500:three_prime_UTR | 45.0% | |
| !! | GGATTTAAAACGGGTTGACC+CGG | + | chr2_3:52532739-52532758 | None:intergenic | 45.0% |
| TTGTTTCAAGGTGGAGGTGA+TGG | + | chr2_3:52532770-52532789 | None:intergenic | 45.0% | |
| CGGTGGTGACATTTGTTTCA+AGG | + | chr2_3:52532782-52532801 | None:intergenic | 45.0% | |
| TCGGGTTATATCATTCGGGT+GGG | + | chr2_3:52532835-52532854 | None:intergenic | 45.0% | |
| TCGGGTCGGGTTATATCATT+CGG | + | chr2_3:52532840-52532859 | None:intergenic | 45.0% | |
| AATGATATAACCCGACCCGA+CGG | - | chr2_3:52532840-52532859 | Msa0298500:three_prime_UTR | 45.0% | |
| AATACCATGGATGACACCGT+CGG | + | chr2_3:52532859-52532878 | None:intergenic | 45.0% | |
| TGATTGAACGGAGACTACGA+CGG | + | chr2_3:52532926-52532945 | None:intergenic | 45.0% | |
| ! | GTTTTACGGCGGTGATTGAA+CGG | + | chr2_3:52532938-52532957 | None:intergenic | 45.0% |
| !!! | TGGTGCACCTTCTGGTTTTA+CGG | + | chr2_3:52532952-52532971 | None:intergenic | 45.0% |
| GCTTCGTAAATCGGAATCTC+CGG | + | chr2_3:52533038-52533057 | None:intergenic | 45.0% | |
| GTAACTCTCCGTTGAAGTGA+TGG | + | chr2_3:52533118-52533137 | None:intergenic | 45.0% | |
| CAACGGAGAGTTACAAGTGA+AGG | - | chr2_3:52533124-52533143 | Msa0298500:intron | 45.0% | |
| AAACCTAACGTCGTTAGCGA+CGG | - | chr2_3:52533205-52533224 | Msa0298500:intron | 45.0% | |
| TTCGTCATTCGGAGCCAAAA+CGG | + | chr2_3:52533267-52533286 | None:intergenic | 45.0% | |
| CTCTCTTCCGTTTGATACTC+AGG | + | chr2_3:52533365-52533384 | None:intergenic | 45.0% | |
| TGCTGTTAGGAGATTTGGGA+AGG | - | chr2_3:52533394-52533413 | Msa0298500:intron | 45.0% | |
| GAAGTATAAGGTTGTGGCTC+AGG | - | chr2_3:52533439-52533458 | Msa0298500:intron | 45.0% | |
| ! | GCTGATGGGTCGGTTAAATT+TGG | - | chr2_3:52533464-52533483 | Msa0298500:intron | 45.0% |
| GGGTCGGTTAAATTTGGAGA+TGG | - | chr2_3:52533470-52533489 | Msa0298500:intron | 45.0% | |
| !! | ATTTGGAGATGGTGATGGGT+CGG | - | chr2_3:52533481-52533500 | Msa0298500:intron | 45.0% |
| CGGATATTTATACGGATGGG+AGG | - | chr2_3:52533519-52533538 | Msa0298500:intron | 45.0% | |
| GATGGGAGGATTTCTGTTCA+AGG | - | chr2_3:52533533-52533552 | Msa0298500:intron | 45.0% | |
| !!! | TGGGGTTTTGTTTCCTGTGA+AGG | - | chr2_3:52533562-52533581 | Msa0298500:intron | 45.0% |
| GTTTCCTGTGAAGGAGAAAG+AGG | - | chr2_3:52533571-52533590 | Msa0298500:intron | 45.0% | |
| ACAACCTCTTTCTCCTTCAC+AGG | + | chr2_3:52533578-52533597 | None:intergenic | 45.0% | |
| GGTTGACCCATCATCGAAAT+GGG | + | chr2_3:52533620-52533639 | None:intergenic | 45.0% | |
| !!! | GGTCATTCATTTTGGAACCG+AGG | + | chr2_3:52533686-52533705 | None:intergenic | 45.0% |
| CATCTCCTCTCCTAGTCTAA+AGG | + | chr2_3:52533896-52533915 | None:intergenic | 45.0% | |
| AGTGTCTTCAATTGGGCGTT+TGG | - | chr2_3:52534115-52534134 | Msa0298500:intron | 45.0% | |
| GAGTACATCAAAGGCAGTTC+AGG | + | chr2_3:52534465-52534484 | None:intergenic | 45.0% | |
| GTTTCTTGCAGGGAAACTAC+TGG | - | chr2_3:52534813-52534832 | Msa0298500:CDS | 45.0% | |
| AACTACTGGAAACAGCATGC+TGG | - | chr2_3:52534827-52534846 | Msa0298500:CDS | 45.0% | |
| TGTGCTAGCAGGCATGTAAA+TGG | + | chr2_3:52535080-52535099 | None:intergenic | 45.0% | |
| ! | GATGCAGATTCACGGATTGA+TGG | - | chr2_3:52535106-52535125 | Msa0298500:intron | 45.0% |
| GAAGATCTCGCTGGAGATAA+TGG | - | chr2_3:52535160-52535179 | Msa0298500:CDS | 45.0% | |
| TTTGCTCACTCGTCTATGAC+TGG | + | chr2_3:52535266-52535285 | None:intergenic | 45.0% | |
| ATCCTACCCAACCATGACAT+TGG | + | chr2_3:52535361-52535380 | None:intergenic | 45.0% | |
| TGGTTGGGTAGGATTGTGTT+AGG | - | chr2_3:52535367-52535386 | Msa0298500:CDS | 45.0% | |
| GTAATACAACATGCCTGGCT+AGG | - | chr2_3:52535507-52535526 | Msa0298500:CDS | 45.0% | |
| TGGGTCAAGGTTACGTTCGA+GGG | + | chr2_3:52532628-52532647 | None:intergenic | 50.0% | |
| GGGAAAGAATGTTACCGGGT+TGG | + | chr2_3:52532671-52532690 | None:intergenic | 50.0% | |
| GGAAAGAAGGAGGGTTTGGA+GGG | + | chr2_3:52532691-52532710 | None:intergenic | 50.0% | |
| GAATGACGTGGGAAAGAAGG+AGG | + | chr2_3:52532701-52532720 | None:intergenic | 50.0% | |
| !! | GAATTCGGGTTGGAATGACG+TGG | + | chr2_3:52532713-52532732 | None:intergenic | 50.0% |
| GGTTGACCCGGAATGAATTC+GGG | + | chr2_3:52532727-52532746 | None:intergenic | 50.0% | |
| GGGTTGACCCGGAATGAATT+CGG | + | chr2_3:52532728-52532747 | None:intergenic | 50.0% | |
| ! | TTCAAGGTGGAGGTGATGGT+CGG | + | chr2_3:52532766-52532785 | None:intergenic | 50.0% |
| TGTCACCACCGGAGAATTCA+CGG | - | chr2_3:52532791-52532810 | Msa0298500:three_prime_UTR | 50.0% | |
| GTTAACCGTGAATTCTCCGG+TGG | + | chr2_3:52532799-52532818 | None:intergenic | 50.0% | |
| GTCGGGTTATATCATTCGGG+TGG | + | chr2_3:52532836-52532855 | None:intergenic | 50.0% | |
| CGGGTCGGGTTATATCATTC+GGG | + | chr2_3:52532839-52532858 | None:intergenic | 50.0% | |
| ATACCATGGATGACACCGTC+GGG | + | chr2_3:52532858-52532877 | None:intergenic | 50.0% | |
| ATCACCGCCGTAAAACCAGA+AGG | - | chr2_3:52532942-52532961 | Msa0298500:three_prime_UTR | 50.0% | |
| !!! | TGCACCTTCTGGTTTTACGG+CGG | + | chr2_3:52532949-52532968 | None:intergenic | 50.0% |
| TCGTAAATCGGAATCTCCGG+TGG | + | chr2_3:52533035-52533054 | None:intergenic | 50.0% | |
| GGACCACACCATCACTTCAA+CGG | - | chr2_3:52533107-52533126 | Msa0298500:intron | 50.0% | |
| ! | TCTCCGTTGAAGTGATGGTG+TGG | + | chr2_3:52533113-52533132 | None:intergenic | 50.0% |
| CGGTGGTTACAACGAAATGG+CGG | - | chr2_3:52533172-52533191 | Msa0298500:intron | 50.0% | |
| TTCGCCATCGCTTCGTCATT+CGG | + | chr2_3:52533278-52533297 | None:intergenic | 50.0% | |
| AGCGATGGCGAAGTTAACGA+CGG | - | chr2_3:52533286-52533305 | Msa0298500:intron | 50.0% | |
| GACGGAGGAGTTAAGTGAAC+CGG | - | chr2_3:52533304-52533323 | Msa0298500:intron | 50.0% | |
| ACGGAGGAGTTAAGTGAACC+GGG | - | chr2_3:52533305-52533324 | Msa0298500:intron | 50.0% | |
| GTTAAGTGAACCGGGTTCAC+CGG | - | chr2_3:52533313-52533332 | Msa0298500:intron | 50.0% | |
| ATTATCTCCTCCGGTGAACC+CGG | + | chr2_3:52533326-52533345 | None:intergenic | 50.0% | |
| TTGTGGCTCAGGAAGCTGAT+GGG | - | chr2_3:52533450-52533469 | Msa0298500:intron | 50.0% | |
| !! | TTTGGAGATGGTGATGGGTC+GGG | - | chr2_3:52533482-52533501 | Msa0298500:intron | 50.0% |
| GAAGGAGAAAGAGGTTGTGC+CGG | - | chr2_3:52533580-52533599 | Msa0298500:intron | 50.0% | |
| GGGTTGACCCATCATCGAAA+TGG | + | chr2_3:52533621-52533640 | None:intergenic | 50.0% | |
| !! | TTTCGATGATGGGTCAACCC+AGG | - | chr2_3:52533621-52533640 | Msa0298500:intron | 50.0% |
| !! | ATGATGGGTCAACCCAGGAA+AGG | - | chr2_3:52533626-52533645 | Msa0298500:intron | 50.0% |
| TGTTCAACGACGCCTTTCCT+GGG | + | chr2_3:52533641-52533660 | None:intergenic | 50.0% | |
| ATGTTCAACGACGCCTTTCC+TGG | + | chr2_3:52533642-52533661 | None:intergenic | 50.0% | |
| GGCGTCGTTGAACATAGAAG+AGG | - | chr2_3:52533647-52533666 | Msa0298500:intron | 50.0% | |
| GAGGTGCGTTACTACTTCCT+CGG | - | chr2_3:52533666-52533685 | Msa0298500:intron | 50.0% | |
| TTGTGTGGCAGACCTTGTTC+TGG | - | chr2_3:52533978-52533997 | Msa0298500:intron | 50.0% | |
| GAAACAGCATGCTGGATGCT+TGG | - | chr2_3:52534835-52534854 | Msa0298500:CDS | 50.0% | |
| GCATCAAAGCATGTGCTAGC+AGG | + | chr2_3:52535091-52535110 | None:intergenic | 50.0% | |
| CTCCAATGTCATGGTTGGGT+AGG | - | chr2_3:52535356-52535375 | Msa0298500:CDS | 50.0% | |
| CGGCGCAAGCCTATCAAAAA+TGG | + | chr2_3:52535429-52535448 | None:intergenic | 50.0% | |
| CGTTCGAGGGCTACGTTGTT+TGG | + | chr2_3:52532615-52532634 | None:intergenic | 55.0% | |
| CTGGGTCAAGGTTACGTTCG+AGG | + | chr2_3:52532629-52532648 | None:intergenic | 55.0% | |
| GGGAAAGAAGGAGGGTTTGG+AGG | + | chr2_3:52532692-52532711 | None:intergenic | 55.0% | |
| CGTGGGAAAGAAGGAGGGTT+TGG | + | chr2_3:52532695-52532714 | None:intergenic | 55.0% | |
| GACCCGGAATGAATTCGGGT+TGG | + | chr2_3:52532723-52532742 | None:intergenic | 55.0% | |
| !! | TCGGGTGGGTTACCTTCTCT+TGG | + | chr2_3:52532821-52532840 | None:intergenic | 55.0% |
| AATCATCCACAACGGCGCGT+GGG | + | chr2_3:52532896-52532915 | None:intergenic | 55.0% | |
| AAATCATCCACAACGGCGCG+TGG | + | chr2_3:52532897-52532916 | None:intergenic | 55.0% | |
| TCAGCTTCTGGTGCACCTTC+TGG | + | chr2_3:52532960-52532979 | None:intergenic | 55.0% | |
| !! | GGTGGTGAGCCTGGTTTTTC+CGG | + | chr2_3:52533017-52533036 | None:intergenic | 55.0% |
| GGAAAAACCAGGCTCACCAC+CGG | - | chr2_3:52533016-52533035 | Msa0298500:CDS | 55.0% | |
| ! | AAGTGATGGTGTGGTCCTCC+TGG | + | chr2_3:52533104-52533123 | None:intergenic | 55.0% |
| TCTCCGTCGCTAACGACGTT+AGG | + | chr2_3:52533211-52533230 | None:intergenic | 55.0% | |
| GATGGCGAAGTTAACGACGG+AGG | - | chr2_3:52533289-52533308 | Msa0298500:intron | 55.0% | |
| GTTGTGGCTCAGGAAGCTGA+TGG | - | chr2_3:52533449-52533468 | Msa0298500:intron | 55.0% | |
| ATGGGTTTAACCCGCTCCAC+CGG | + | chr2_3:52533602-52533621 | None:intergenic | 55.0% | |
| ! | GTGGAGGTGATGGTCGGAGA+TGG | + | chr2_3:52532760-52532779 | None:intergenic | 60.0% |
| ATGGATGACACCGTCGGGTC+GGG | + | chr2_3:52532853-52532872 | None:intergenic | 60.0% | |
| CATGGATGACACCGTCGGGT+CGG | + | chr2_3:52532854-52532873 | None:intergenic | 60.0% | |
| TCTTATCCCACGCGCCGTTG+TGG | - | chr2_3:52532887-52532906 | Msa0298500:three_prime_UTR | 60.0% | |
| TCCGGGACCATCACTAGCTC+CGG | - | chr2_3:52533064-52533083 | Msa0298500:CDS | 60.0% | |
| ACCATCACTAGCTCCGGCAC+CGG | - | chr2_3:52533070-52533089 | Msa0298500:CDS | 60.0% | |
| GGCTCCGAATGACGAAGCGA+TGG | - | chr2_3:52533271-52533290 | Msa0298500:intron | 60.0% | |
| AAGTGAACCGGGTTCACCGG+AGG | - | chr2_3:52533316-52533335 | Msa0298500:intron | 60.0% | |
| ! | GGCTCAGGAAGCTGATGGGT+CGG | - | chr2_3:52533454-52533473 | Msa0298500:intron | 60.0% |
| GGAGAAAGAGGTTGTGCCGG+TGG | - | chr2_3:52533583-52533602 | Msa0298500:intron | 60.0% | |
| ! | AAGAGGTTGTGCCGGTGGAG+CGG | - | chr2_3:52533588-52533607 | Msa0298500:intron | 60.0% |
| !! | CGACCCGACGGTGTCATCCA+TGG | - | chr2_3:52532852-52532871 | Msa0298500:three_prime_UTR | 65.0% |
| GGAATCTCCGGTGGTGAGCC+TGG | + | chr2_3:52533026-52533045 | None:intergenic | 65.0% | |
| GCCGGAGCTAGTGATGGTCC+CGG | + | chr2_3:52533068-52533087 | None:intergenic | 65.0% | |
| TGGTGTGGTCCTCCTGGTCC+CGG | + | chr2_3:52533098-52533117 | None:intergenic | 65.0% | |
| ! | AGAGGTTGTGCCGGTGGAGC+GGG | - | chr2_3:52533589-52533608 | Msa0298500:intron | 65.0% |
| ! | GCCGGTGCCGGAGCTAGTGA+TGG | + | chr2_3:52533074-52533093 | None:intergenic | 70.0% |
| !! | ACTAGCTCCGGCACCGGCGC+CGG | - | chr2_3:52533076-52533095 | Msa0298500:CDS | 75.0% |
| !!! | CTAGCTCCGGCACCGGCGCC+GGG | - | chr2_3:52533077-52533096 | Msa0298500:CDS | 80.0% |
| ! | GGTCCTCCTGGTCCCGGCGC+CGG | + | chr2_3:52533092-52533111 | None:intergenic | 80.0% |
| !!! | CCTGGTCCCGGCGCCGGTGC+CGG | + | chr2_3:52533086-52533105 | None:intergenic | 85.0% |
| !! | GCACCGGCGCCGGGACCAGG+AGG | - | chr2_3:52533086-52533105 | Msa0298500:CDS | 85.0% |
| !!! | CCGGCACCGGCGCCGGGACC+AGG | - | chr2_3:52533083-52533102 | Msa0298500:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 52532396 | 52535536 | 52532396 | ID=Msa0298500;Name=Msa0298500 |
| chr2_3 | mRNA | 52532396 | 52535536 | 52532396 | ID=Msa0298500-mRNA-1;Parent=Msa0298500;Name=Msa0298500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0.2|1|0|0.2|5|587|430 |
| chr2_3 | exon | 52532396 | 52533108 | 52532396 | ID=Msa0298500-mRNA-1:exon:16771;Parent=Msa0298500-mRNA-1 |
| chr2_3 | exon | 52534322 | 52534516 | 52534322 | ID=Msa0298500-mRNA-1:exon:16770;Parent=Msa0298500-mRNA-1 |
| chr2_3 | exon | 52534535 | 52535104 | 52534535 | ID=Msa0298500-mRNA-1:exon:16769;Parent=Msa0298500-mRNA-1 |
| chr2_3 | exon | 52535120 | 52535283 | 52535120 | ID=Msa0298500-mRNA-1:exon:16768;Parent=Msa0298500-mRNA-1 |
| chr2_3 | exon | 52535299 | 52535536 | 52535299 | ID=Msa0298500-mRNA-1:exon:16767;Parent=Msa0298500-mRNA-1 |
| chr2_3 | CDS | 52535299 | 52535536 | 52535299 | ID=Msa0298500-mRNA-1:cds;Parent=Msa0298500-mRNA-1 |
| chr2_3 | CDS | 52535120 | 52535283 | 52535120 | ID=Msa0298500-mRNA-1:cds;Parent=Msa0298500-mRNA-1 |
| chr2_3 | CDS | 52534535 | 52535104 | 52534535 | ID=Msa0298500-mRNA-1:cds;Parent=Msa0298500-mRNA-1 |
| chr2_3 | CDS | 52534322 | 52534516 | 52534322 | ID=Msa0298500-mRNA-1:cds;Parent=Msa0298500-mRNA-1 |
| chr2_3 | CDS | 52532983 | 52533108 | 52532983 | ID=Msa0298500-mRNA-1:cds;Parent=Msa0298500-mRNA-1 |
| chr2_3 | three_prime_UTR | 52532396 | 52532982 | 52532396 | ID=Msa0298500-mRNA-1:three_prime_utr;Parent=Msa0298500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
