Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336390 | XP_024632406.1 | 88.750 | 480 | 54 | 0 | 1 | 480 | 1 | 480 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336390 | sp|Q9C585|UBP8_ARATH | 65.826 | 436 | 139 | 4 | 1 | 427 | 1 | 435 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039250 | Msa0336390 | 0.801651 | 8.143997e-49 | -8.615850e-47 |
| Msa0133720 | Msa0336390 | 0.803984 | 2.684720e-49 | -8.615850e-47 |
| Msa0133820 | Msa0336390 | 0.801423 | 9.066464e-49 | -8.615850e-47 |
| Msa0336390 | Msa0861510 | 0.816180 | 6.316505e-52 | -8.615850e-47 |
| Msa0336390 | Msa0861530 | 0.816170 | 6.348500e-52 | -8.615850e-47 |
| Msa0336390 | Msa0861600 | 0.817823 | 2.700474e-52 | -8.615850e-47 |
| Msa0336390 | Msa1035060 | 0.805474 | 1.312042e-49 | -8.615850e-47 |
| Msa0336390 | Msa1050910 | 0.801727 | 7.853751e-49 | -8.615850e-47 |
| Msa0336390 | Msa1331120 | 0.803290 | 3.741252e-49 | -8.615850e-47 |
| Msa0336390 | Msa1377290 | 0.805686 | 1.183994e-49 | -8.615850e-47 |
| Msa0336390 | Msa1439610 | 0.801607 | 8.315600e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336390 | MtrunA17_Chr2g0322211 | 88.750 | 480 | 54 | 0 | 1 | 480 | 1 | 480 | 0.0 | 860 |
| Msa0336390 | MtrunA17_Chr7g0267641 | 49.083 | 436 | 185 | 8 | 11 | 427 | 76 | 493 | 1.16e-124 | 390 |
| Msa0336390 | MtrunA17_Chr2g0322251 | 95.028 | 181 | 8 | 1 | 419 | 598 | 246 | 426 | 3.00e-116 | 353 |
| Msa0336390 | MtrunA17_Chr4g0025311 | 80.000 | 180 | 35 | 1 | 419 | 598 | 269 | 447 | 4.72e-93 | 294 |
| Msa0336390 | MtrunA17_Chr7g0255591 | 40.950 | 442 | 211 | 10 | 27 | 427 | 41 | 473 | 1.21e-91 | 302 |
| Msa0336390 | MtrunA17_Chr7g0267811 | 77.143 | 175 | 34 | 2 | 419 | 587 | 255 | 429 | 3.58e-88 | 281 |
| Msa0336390 | MtrunA17_Chr1g0189101 | 46.006 | 363 | 162 | 6 | 96 | 427 | 117 | 476 | 3.19e-87 | 290 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0336390 | AT5G22030.1 | 65.826 | 436 | 139 | 4 | 1 | 427 | 1 | 435 | 0.0 | 567 |
| Msa0336390 | AT5G22030.2 | 59.414 | 478 | 142 | 7 | 1 | 427 | 1 | 477 | 3.38e-178 | 528 |
| Msa0336390 | AT2G40930.1 | 40.476 | 504 | 261 | 10 | 19 | 487 | 34 | 533 | 1.02e-108 | 348 |
| Msa0336390 | AT2G40930.2 | 40.476 | 504 | 261 | 10 | 19 | 487 | 34 | 533 | 1.02e-108 | 348 |
| Msa0336390 | AT2G35860.1 | 77.778 | 180 | 34 | 2 | 419 | 598 | 257 | 430 | 3.80e-90 | 286 |
| Msa0336390 | AT5G06390.1 | 77.778 | 180 | 31 | 3 | 419 | 598 | 268 | 438 | 2.93e-88 | 281 |
| Msa0336390 | AT4G10590.4 | 41.950 | 441 | 212 | 10 | 16 | 427 | 34 | 459 | 3.98e-88 | 293 |
| Msa0336390 | AT4G10590.3 | 41.950 | 441 | 212 | 10 | 16 | 427 | 34 | 459 | 3.98e-88 | 293 |
| Msa0336390 | AT4G10590.1 | 41.950 | 441 | 212 | 10 | 16 | 427 | 34 | 459 | 3.98e-88 | 293 |
| Msa0336390 | AT4G10590.2 | 41.950 | 441 | 212 | 10 | 16 | 427 | 34 | 459 | 3.98e-88 | 293 |
| Msa0336390 | AT3G52370.1 | 75.556 | 180 | 37 | 2 | 419 | 598 | 249 | 421 | 1.85e-87 | 279 |
| Msa0336390 | AT3G52370.2 | 75.556 | 180 | 37 | 2 | 419 | 598 | 302 | 474 | 2.85e-87 | 280 |
| Msa0336390 | AT4G10570.1 | 41.535 | 443 | 212 | 11 | 16 | 427 | 34 | 460 | 7.63e-87 | 290 |
| Msa0336390 | AT3G11700.1 | 76.111 | 180 | 36 | 1 | 419 | 598 | 271 | 443 | 1.48e-85 | 275 |
| Msa0336390 | AT1G32850.1 | 45.531 | 358 | 164 | 7 | 98 | 427 | 103 | 457 | 1.01e-84 | 283 |
| Msa0336390 | AT5G05650.1 | 56.180 | 89 | 38 | 1 | 482 | 570 | 5 | 92 | 1.11e-28 | 111 |
| Msa0336390 | AT1G04860.1 | 40.157 | 127 | 58 | 4 | 270 | 390 | 230 | 344 | 1.35e-13 | 74.7 |
| Msa0336390 | AT2G32780.1 | 36.111 | 108 | 57 | 2 | 269 | 373 | 200 | 298 | 8.14e-11 | 65.9 |
Find 167 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCTGGAATTGCAAGTTTA+TGG | 0.107017 | 2_4:+55790382 | Msa0336390:CDS |
| ATCAATTAGGTCATTCATTT+TGG | 0.107836 | 2_4:-55792012 | None:intergenic |
| TATTGTACAGTTACGCATTT+TGG | 0.159872 | 2_4:+55789233 | Msa0336390:intron |
| AACGGTGAAGTGGGTGTTTC+TGG | 0.177673 | 2_4:+55787529 | Msa0336390:CDS |
| TATAATGCTGTTAGGAGATT+TGG | 0.205388 | 2_4:+55791710 | Msa0336390:CDS |
| GCTGATGGGTCGGTTAAATT+TGG | 0.208882 | 2_4:+55791785 | Msa0336390:CDS |
| AGATGCAATGCCAGTGGATT+TGG | 0.263536 | 2_4:+55787372 | Msa0336390:CDS |
| GACTTTGAGGTTGAAGTATA+AGG | 0.267978 | 2_4:+55791748 | Msa0336390:CDS |
| GTTTGATCCGGATATTTATA+CGG | 0.296213 | 2_4:+55791832 | Msa0336390:CDS |
| GCTGGTTCCTTGGGACTAAC+TGG | 0.296531 | 2_4:+55790529 | Msa0336390:CDS |
| TTCAGCAACCGACACTGATA+TGG | 0.302256 | 2_4:+55788503 | Msa0336390:CDS |
| TTCGCCATTGCTTCGTCATT+CGG | 0.307481 | 2_4:-55791596 | None:intergenic |
| AAGAAGTTGCCGATGAATAT+TGG | 0.315259 | 2_4:+55791164 | Msa0336390:CDS |
| TTTGATACTCAGGGATAATA+TGG | 0.322083 | 2_4:-55791673 | None:intergenic |
| TTCTGGAATTGCAAGTTTAT+GGG | 0.333472 | 2_4:+55790383 | Msa0336390:CDS |
| GAGATTTACTTAGGAAGTTA+TGG | 0.335089 | 2_4:+55790828 | Msa0336390:CDS |
| AGGGAAATAGATTTAAAATT+CGG | 0.341869 | 2_4:-55787018 | None:intergenic |
| CCTGGTGAAGCTGGTTCCTT+GGG | 0.342259 | 2_4:+55790520 | Msa0336390:CDS |
| TGAATATTGGAATTATCATT+TGG | 0.354078 | 2_4:+55791177 | Msa0336390:CDS |
| CCCTGGTGAAGCTGGTTCCT+TGG | 0.354417 | 2_4:+55790519 | Msa0336390:CDS |
| ATGTTATTAATTATCTTCAT+AGG | 0.356151 | 2_4:-55787445 | None:intergenic |
| TTCTGGTGACATGTGGTTGC+AGG | 0.358697 | 2_4:+55787570 | Msa0336390:CDS |
| TTGTTGTTGTTGTTTGAGTC+TGG | 0.361858 | 2_4:-55787086 | None:intergenic |
| TGAAGTAAGAATAAGCAAAA+AGG | 0.366884 | 2_4:+55788581 | Msa0336390:CDS |
| ATAATGCTGTTAGGAGATTT+GGG | 0.367717 | 2_4:+55791711 | Msa0336390:CDS |
| TCGATACATACAGAATCTTC+TGG | 0.368499 | 2_4:+55790366 | Msa0336390:intron |
| ATCCACACTGAACAGTTTGC+AGG | 0.375869 | 2_4:-55789107 | None:intergenic |
| TCTCCGTCGCTAACGACGTT+AGG | 0.380724 | 2_4:-55791529 | None:intergenic |
| GGAAGAATCGCGGAACGCTT+TGG | 0.385158 | 2_4:+55787504 | Msa0336390:CDS |
| ACTAAACTGAGGTGCAAATC+TGG | 0.386620 | 2_4:-55790900 | None:intergenic |
| AGATTTACTTAGGAAGTTAT+GGG | 0.389219 | 2_4:+55790829 | Msa0336390:CDS |
| CTCTCTTCCGTTTGATACTC+AGG | 0.391445 | 2_4:-55791683 | None:intergenic |
| CTCTCAAAGGCAGTCTGATC+AGG | 0.393958 | 2_4:+55789314 | Msa0336390:CDS |
| ATCAAGACATTACTGCATTA+CGG | 0.398489 | 2_4:+55791473 | Msa0336390:CDS |
| TCTGAGGAACACTCCATTGT+AGG | 0.407409 | 2_4:-55787038 | None:intergenic |
| ATTTCTGTTCAAGGGATTGA+TGG | 0.407728 | 2_4:+55791863 | Msa0336390:CDS |
| TGTTCCTCAGAAGATTCTTC+AGG | 0.413260 | 2_4:+55787050 | Msa0336390:CDS |
| GGAGATGAGTCGTTTAGTTT+CGG | 0.417291 | 2_4:+55791547 | Msa0336390:CDS |
| GTCGGGTTATTTGTTTGATC+CGG | 0.419309 | 2_4:+55791820 | Msa0336390:CDS |
| TCATCGGCAACTTCTTCATC+TGG | 0.420100 | 2_4:-55791157 | None:intergenic |
| TGTTTAGGCCCTGGTGAAGC+TGG | 0.420140 | 2_4:+55790511 | Msa0336390:CDS |
| GGGTTGACCCATCATCGAAA+TGG | 0.420545 | 2_4:-55791939 | None:intergenic |
| TTTGGAGATGGTGATGGGTC+GGG | 0.422793 | 2_4:+55791803 | Msa0336390:CDS |
| GAAGTATAAGGTTGTGGCTC+AGG | 0.427357 | 2_4:+55791760 | Msa0336390:CDS |
| AGCTTTGATTTGAACATCCT+TGG | 0.427768 | 2_4:-55790875 | None:intergenic |
| CCATCCTTTGCTTCTACGTA+AGG | 0.433957 | 2_4:-55791124 | None:intergenic |
| TTGACATTCTGTTTAGGCCC+TGG | 0.434315 | 2_4:+55790502 | Msa0336390:CDS |
| GGTGAGATAGCGTCGGCGTT+TGG | 0.437119 | 2_4:+55790806 | Msa0336390:CDS |
| AGAGTATGTATAATGCTGTT+AGG | 0.440029 | 2_4:+55791702 | Msa0336390:CDS |
| AGCTCAGGCTTTCTGTTCAA+AGG | 0.443396 | 2_4:+55788544 | Msa0336390:CDS |
| GGTTAAACCCATTTCGATGA+TGG | 0.444022 | 2_4:+55791931 | Msa0336390:CDS |
| AGATTTGCACCTCAGTTTAG+TGG | 0.447023 | 2_4:+55790902 | Msa0336390:CDS |
| AGTTCTTTGACATTCTGTTT+AGG | 0.447676 | 2_4:+55790496 | Msa0336390:CDS |
| CTTAGGAAGTTATGGGCTCC+TGG | 0.448104 | 2_4:+55790836 | Msa0336390:CDS |
| CTCCCATCCGTATAAATATC+CGG | 0.451181 | 2_4:-55791839 | None:intergenic |
| AGAGGTTGTGCCGGTGGAGC+GGG | 0.452605 | 2_4:+55791910 | Msa0336390:CDS |
| ATGTATATCCTTTACAGCTC+AGG | 0.454255 | 2_4:+55788529 | Msa0336390:CDS |
| AGAAAATAGTCAACAAGCTT+CGG | 0.456270 | 2_4:-55790613 | None:intergenic |
| TCGCGGAACGCTTTGGAAAA+CGG | 0.457995 | 2_4:+55787511 | Msa0336390:CDS |
| AGGTTAGTTATGAGACTTTG+AGG | 0.459291 | 2_4:+55791735 | Msa0336390:CDS |
| TCAGCAACCGACACTGATAT+GGG | 0.459582 | 2_4:+55788504 | Msa0336390:CDS |
| GGTTGACCCATCATCGAAAT+GGG | 0.460260 | 2_4:-55791938 | None:intergenic |
| GACGGAGGAGTTAAGTGAAC+CGG | 0.462493 | 2_4:+55791625 | Msa0336390:CDS |
| ACAACCTCTTTCTCCTTCAC+AGG | 0.465712 | 2_4:-55791896 | None:intergenic |
| TCATAAAGCAAGTATTTCCT+AGG | 0.468184 | 2_4:-55790561 | None:intergenic |
| GATTGTATATGCATCTTCGC+CGG | 0.471779 | 2_4:+55787408 | Msa0336390:CDS |
| CGGCGTTTGGAGATTTACTT+AGG | 0.472991 | 2_4:+55790819 | Msa0336390:CDS |
| CCCAAGGAACCAGCTTCACC+AGG | 0.474693 | 2_4:-55790520 | None:intergenic |
| CACATACGTTCATGCCCAAT+GGG | 0.475725 | 2_4:-55790669 | None:intergenic |
| TTTGCTTATTCTTACTTCAA+AGG | 0.476276 | 2_4:-55788577 | None:intergenic |
| GATTTGCACCTCAGTTTAGT+GGG | 0.476472 | 2_4:+55790903 | Msa0336390:CDS |
| ATTTGGAGATGGTGATGGGT+CGG | 0.483121 | 2_4:+55791802 | Msa0336390:CDS |
| ATCAATTCTGACAACCCATT+GGG | 0.484985 | 2_4:+55790655 | Msa0336390:CDS |
| TGTCAGACTCAATGAGATGT+AGG | 0.485462 | 2_4:+55790407 | Msa0336390:CDS |
| GTTAAATTTGGAGATGGTGA+TGG | 0.487142 | 2_4:+55791797 | Msa0336390:CDS |
| TTGAACATCCTTGGTGCCAC+AGG | 0.487227 | 2_4:-55790866 | None:intergenic |
| TTACGGTGGTTACAACGAAA+TGG | 0.489351 | 2_4:+55791490 | Msa0336390:CDS |
| ACAGAAAGCCTGAGCTGTAA+AGG | 0.489646 | 2_4:-55788537 | None:intergenic |
| GTTTCCTGTGAAGGAGAAAG+AGG | 0.494382 | 2_4:+55791892 | Msa0336390:CDS |
| ATTGTATATGCATCTTCGCC+GGG | 0.497565 | 2_4:+55787409 | Msa0336390:CDS |
| TTTCTGTTCAAGGGATTGAT+GGG | 0.497867 | 2_4:+55791864 | Msa0336390:CDS |
| GCTCAGGCTTTCTGTTCAAA+GGG | 0.508712 | 2_4:+55788545 | Msa0336390:CDS |
| CGCTTTGGAAAACGGTGAAG+TGG | 0.511034 | 2_4:+55787519 | Msa0336390:CDS |
| ATCCGGATATTTATACGGAT+GGG | 0.511243 | 2_4:+55791837 | Msa0336390:CDS |
| GTTAAACCCATTTCGATGAT+GGG | 0.513111 | 2_4:+55791932 | Msa0336390:CDS |
| TTAAATCTATTTCCCTACAA+TGG | 0.513568 | 2_4:+55787025 | Msa0336390:exon |
| TTAAATTTGGAGATGGTGAT+GGG | 0.514625 | 2_4:+55791798 | Msa0336390:CDS |
| GGTGCCACAGGACTTGCGCC+AGG | 0.518582 | 2_4:-55790854 | None:intergenic |
| ATTATCTCCTCCGGTGAACC+CGG | 0.518780 | 2_4:-55791644 | None:intergenic |
| TGGTAATACATTATCTCCTC+CGG | 0.519375 | 2_4:-55791653 | None:intergenic |
| GATCCGGATATTTATACGGA+TGG | 0.520456 | 2_4:+55791836 | Msa0336390:CDS |
| GATGAGTCGTTTAGTTTCGG+AGG | 0.520707 | 2_4:+55791550 | Msa0336390:CDS |
| GTTAAGTGAACCGGGTTCAC+CGG | 0.522544 | 2_4:+55791634 | Msa0336390:CDS |
| GAGGTTGAAGTATAAGGTTG+TGG | 0.525041 | 2_4:+55791754 | Msa0336390:CDS |
| GATGGGAGGATTTCTGTTCA+AGG | 0.525174 | 2_4:+55791854 | Msa0336390:CDS |
| TTCTTCTTATCCAAATCCAC+TGG | 0.528485 | 2_4:-55787382 | None:intergenic |
| AGTGGATTTGGATAAGAAGA+AGG | 0.531027 | 2_4:+55787384 | Msa0336390:CDS |
| TCACATACGTTCATGCCCAA+TGG | 0.533005 | 2_4:-55790670 | None:intergenic |
| GAGTCTATTTCGTTCCTCAC+AGG | 0.533845 | 2_4:+55787117 | Msa0336390:CDS |
| GGCTCCTGGCGCAAGTCCTG+TGG | 0.533845 | 2_4:+55790850 | Msa0336390:CDS |
| AATCAATTCTGACAACCCAT+TGG | 0.534616 | 2_4:+55790654 | Msa0336390:CDS |
| ATGGGAGGATTTCTGTTCAA+GGG | 0.537140 | 2_4:+55791855 | Msa0336390:CDS |
| CTGAGGAACACTCCATTGTA+GGG | 0.538513 | 2_4:-55787037 | None:intergenic |
| TGCTGTTAGGAGATTTGGGA+AGG | 0.538978 | 2_4:+55791715 | Msa0336390:CDS |
| ATGGGTTTAACCCGCTCCAC+CGG | 0.539798 | 2_4:-55791920 | None:intergenic |
| GCGTATGTGTTAAGCACTGA+AGG | 0.542219 | 2_4:-55790591 | None:intergenic |
| TGTGTGTTTCAGGTGGTGGA+AGG | 0.548237 | 2_4:+55787342 | Msa0336390:intron |
| TCTTCGCCGGGTTCATCATA+CGG | 0.549866 | 2_4:+55787421 | Msa0336390:CDS |
| ATGATAATTCCAATATTCAT+CGG | 0.554242 | 2_4:-55791173 | None:intergenic |
| GTGAAGTGGGTGTTTCTGGA+AGG | 0.559794 | 2_4:+55787533 | Msa0336390:CDS |
| AGACTGCCTTTGAGAGTCTG+TGG | 0.561067 | 2_4:-55789307 | None:intergenic |
| GGAGAAAGAGGTTGTGCCGG+TGG | 0.563868 | 2_4:+55791904 | Msa0336390:CDS |
| CTTTGGTTTCTGGTGACATG+TGG | 0.564371 | 2_4:+55787563 | Msa0336390:CDS |
| TTGTAATCCAGTTAGTCCCA+AGG | 0.565304 | 2_4:-55790536 | None:intergenic |
| TGAAGTGGGTGTTTCTGGAA+GGG | 0.565506 | 2_4:+55787534 | Msa0336390:CDS |
| TTCTGTTCAAGGGATTGATG+GGG | 0.568281 | 2_4:+55791865 | Msa0336390:CDS |
| AAGAGGTTGTGCCGGTGGAG+CGG | 0.568322 | 2_4:+55791909 | Msa0336390:CDS |
| CGTGTTTAATCTTCAGAGAG+AGG | 0.569157 | 2_4:+55787483 | Msa0336390:CDS |
| GACTGCCTTTGAGAGTCTGT+GGG | 0.570664 | 2_4:-55789306 | None:intergenic |
| TATTATCCCTGAGTATCAAA+CGG | 0.570877 | 2_4:+55791676 | Msa0336390:CDS |
| GAGGTGCGTTACTACTTCCT+CGG | 0.577447 | 2_4:+55791987 | Msa0336390:CDS |
| TCTCTTCCGTTTGATACTCA+GGG | 0.578898 | 2_4:-55791682 | None:intergenic |
| GTGGATTTGGATAAGAAGAA+GGG | 0.583630 | 2_4:+55787385 | Msa0336390:CDS |
| GACTCAATGAGATGTAGGGA+AGG | 0.587033 | 2_4:+55790412 | Msa0336390:CDS |
| GTCAGACTCAATGAGATGTA+GGG | 0.589104 | 2_4:+55790408 | Msa0336390:CDS |
| ATGTGCCCACAGACTCTCAA+AGG | 0.590655 | 2_4:+55789301 | Msa0336390:CDS |
| GGCTCAGGAAGCTGATGGGT+CGG | 0.592530 | 2_4:+55791775 | Msa0336390:CDS |
| GGCTCCGAATGACGAAGCAA+TGG | 0.595356 | 2_4:+55791592 | Msa0336390:CDS |
| GTTGTGGCTCAGGAAGCTGA+TGG | 0.599967 | 2_4:+55791770 | Msa0336390:CDS |
| AAACCTAACGTCGTTAGCGA+CGG | 0.600354 | 2_4:+55791526 | Msa0336390:CDS |
| TACATCTCCCATATCAGTGT+CGG | 0.602054 | 2_4:-55788511 | None:intergenic |
| CGGATATTTATACGGATGGG+AGG | 0.612456 | 2_4:+55791840 | Msa0336390:CDS |
| GGGTCGGTTAAATTTGGAGA+TGG | 0.613917 | 2_4:+55791791 | Msa0336390:CDS |
| TTGTGGCTCAGGAAGCTGAT+GGG | 0.614094 | 2_4:+55791771 | Msa0336390:CDS |
| TAAGCCTTACGTAGAAGCAA+AGG | 0.615015 | 2_4:+55791120 | Msa0336390:CDS |
| CTAACTGGATTACAAAACCT+AGG | 0.616661 | 2_4:+55790544 | Msa0336390:CDS |
| GTTCAGTGTGGATTCAGAGA+TGG | 0.618829 | 2_4:+55789117 | Msa0336390:CDS |
| GCTTTGGAAAACGGTGAAGT+GGG | 0.625332 | 2_4:+55787520 | Msa0336390:CDS |
| AGCGTCGTTGAACATAGAAG+AGG | 0.627928 | 2_4:+55791968 | Msa0336390:CDS |
| ATGAGTCGTTTAGTTTCGGA+GGG | 0.628933 | 2_4:+55791551 | Msa0336390:CDS |
| TTTCGATGATGGGTCAACCC+AGG | 0.629415 | 2_4:+55791942 | Msa0336390:CDS |
| TTGCCAGGGTGAGATAGCGT+CGG | 0.629473 | 2_4:+55790799 | Msa0336390:intron |
| GTAGAAGCAAAGGATGGAGA+TGG | 0.630897 | 2_4:+55791130 | Msa0336390:CDS |
| TGGATTTGGATAAGAAGAAG+GGG | 0.632219 | 2_4:+55787386 | Msa0336390:CDS |
| AGTGCTTCAATGAAGATGAA+TGG | 0.633715 | 2_4:+55790451 | Msa0336390:CDS |
| TCAAAGGCAGTCTGATCAGG+AGG | 0.634041 | 2_4:+55789317 | Msa0336390:CDS |
| CCTTACGTAGAAGCAAAGGA+TGG | 0.637038 | 2_4:+55791124 | Msa0336390:CDS |
| TGCACAAGATGCAATGCCAG+TGG | 0.639892 | 2_4:+55787366 | Msa0336390:CDS |
| ACTCAATGAGATGTAGGGAA+GGG | 0.641133 | 2_4:+55790413 | Msa0336390:CDS |
| GAAGGAGAAAGAGGTTGTGC+CGG | 0.644032 | 2_4:+55791901 | Msa0336390:CDS |
| GTTACCTGAAGAATCTTCTG+AGG | 0.648796 | 2_4:-55787054 | None:intergenic |
| CGTATGTGTTAAGCACTGAA+GGG | 0.649480 | 2_4:-55790590 | None:intergenic |
| ACGGAGGAGTTAAGTGAACC+GGG | 0.650333 | 2_4:+55791626 | Msa0336390:CDS |
| GCGCAAGTCCTGTGGCACCA+AGG | 0.655432 | 2_4:+55790858 | Msa0336390:CDS |
| TTCAGAGAGAGGAAGAATCG+CGG | 0.659754 | 2_4:+55787494 | Msa0336390:CDS |
| ATAGGACCGTATGATGAACC+CGG | 0.664092 | 2_4:-55787427 | None:intergenic |
| CCAAGGAACCAGCTTCACCA+GGG | 0.669980 | 2_4:-55790519 | None:intergenic |
| AAGTGAACCGGGTTCACCGG+AGG | 0.679744 | 2_4:+55791637 | Msa0336390:CDS |
| AATGCAACGAAAGATGACAA+AGG | 0.681752 | 2_4:+55788477 | Msa0336390:CDS |
| CGGTGGTTACAACGAAATGG+CGG | 0.694396 | 2_4:+55791493 | Msa0336390:CDS |
| AGCCTGCAAACTGTTCAGTG+TGG | 0.702912 | 2_4:+55789105 | Msa0336390:CDS |
| AAGACATTACTGCATTACGG+TGG | 0.719316 | 2_4:+55791476 | Msa0336390:CDS |
| TGTATGAACCCTAACCTGTG+AGG | 0.726687 | 2_4:-55787131 | None:intergenic |
| TGATTAAACCCACTAAACTG+AGG | 0.729379 | 2_4:-55790911 | None:intergenic |
| AATGGCGAAGTTAACGACGG+AGG | 0.730607 | 2_4:+55791610 | Msa0336390:CDS |
| TGTGGTTGCAGGCACTCAAG+TGG | 0.730862 | 2_4:+55787581 | Msa0336390:CDS |
| AGCAATGGCGAAGTTAACGA+CGG | 0.732441 | 2_4:+55791607 | Msa0336390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTTATTAATTATCTTCAT+AGG | - | chr2_4:55787448-55787467 | None:intergenic | 15.0% |
| !! | ATGCTAAAAATAAATTGAAA+GGG | - | chr2_4:55788646-55788665 | None:intergenic | 15.0% |
| !! | TCTTATTATTCAAATTCTAT+CGG | + | chr2_4:55789028-55789047 | Msa0336390:intron | 15.0% |
| !!! | TCTTTGTAATTTAACTTTTT+AGG | + | chr2_4:55789384-55789403 | Msa0336390:intron | 15.0% |
| !! | TACGTAATAATTACAAATAA+AGG | - | chr2_4:55789655-55789674 | None:intergenic | 15.0% |
| !! | TTTATTTGTAATTATTACGT+AGG | + | chr2_4:55789654-55789673 | Msa0336390:intron | 15.0% |
| !! | ACATAAAACTAATAGATTAT+GGG | - | chr2_4:55790710-55790729 | None:intergenic | 15.0% |
| !!! | AGGGAAATAGATTTAAAATT+CGG | - | chr2_4:55787021-55787040 | None:intergenic | 20.0% |
| !!! | ATTTAAAGTTGAACTGAATT+AGG | + | chr2_4:55787663-55787682 | Msa0336390:intron | 20.0% |
| !! | TCATAAATCTAAACCATATA+TGG | - | chr2_4:55787727-55787746 | None:intergenic | 20.0% |
| !! | AATTAATAACGTCAAAAAAC+AGG | - | chr2_4:55787831-55787850 | None:intergenic | 20.0% |
| !! | TGGAAAATGAATTATACTTT+AGG | + | chr2_4:55787863-55787882 | Msa0336390:intron | 20.0% |
| !! | GGAAAATGAATTATACTTTA+GGG | + | chr2_4:55787864-55787883 | Msa0336390:intron | 20.0% |
| !! | ATTAATGAAATCAGTTCATA+AGG | + | chr2_4:55788145-55788164 | Msa0336390:intron | 20.0% |
| !! | TGCTAAAAATAAATTGAAAG+GGG | - | chr2_4:55788645-55788664 | None:intergenic | 20.0% |
| !! | CATGCTAAAAATAAATTGAA+AGG | - | chr2_4:55788647-55788666 | None:intergenic | 20.0% |
| !!! | TGTTGTTTTATACTCATTAA+AGG | + | chr2_4:55788803-55788822 | Msa0336390:intron | 20.0% |
| !! | TACAAGTGTATATTCAATAT+CGG | + | chr2_4:55788931-55788950 | Msa0336390:intron | 20.0% |
| !! | AAAAGTTAAATTACAAAGAC+AGG | - | chr2_4:55789383-55789402 | None:intergenic | 20.0% |
| !!! | TCAAATATTAGTTTGGATTT+TGG | + | chr2_4:55789840-55789859 | Msa0336390:intron | 20.0% |
| !! | TTTGATAAAATCCATAAAGA+GGG | - | chr2_4:55790260-55790279 | None:intergenic | 20.0% |
| !!! | TTTTGATAAAATCCATAAAG+AGG | - | chr2_4:55790261-55790280 | None:intergenic | 20.0% |
| !! | CACATAAAACTAATAGATTA+TGG | - | chr2_4:55790711-55790730 | None:intergenic | 20.0% |
| !! | ATGATAATTCCAATATTCAT+CGG | - | chr2_4:55791176-55791195 | None:intergenic | 20.0% |
| !! | TGAATATTGGAATTATCATT+TGG | + | chr2_4:55791177-55791196 | Msa0336390:CDS | 20.0% |
| !! | ATACATAAATGATACATGAT+GGG | + | chr2_4:55791279-55791298 | Msa0336390:intron | 20.0% |
| !! | TTAAAATTCGGTTCGAAAAA+TGG | - | chr2_4:55787009-55787028 | None:intergenic | 25.0% |
| ! | TTAAATCTATTTCCCTACAA+TGG | + | chr2_4:55787025-55787044 | Msa0336390:exon | 25.0% |
| ! | TAAAACAACAGAAACGAATA+AGG | - | chr2_4:55787613-55787632 | None:intergenic | 25.0% |
| !!! | GGCATTTTTATTTCCATATA+TGG | + | chr2_4:55787711-55787730 | Msa0336390:intron | 25.0% |
| ! | CTTATAACTTTGTGTGATTT+AGG | + | chr2_4:55787748-55787767 | Msa0336390:intron | 25.0% |
| ! | TATTAATTACTCTGTTTCGT+TGG | + | chr2_4:55787843-55787862 | Msa0336390:intron | 25.0% |
| !! | GTTAATTGCTGAACTATTTT+CGG | + | chr2_4:55787932-55787951 | Msa0336390:intron | 25.0% |
| ! | CATTTCTATACAAAATTGGT+TGG | - | chr2_4:55787986-55788005 | None:intergenic | 25.0% |
| !! | CAACCAATTTTGTATAGAAA+TGG | + | chr2_4:55787984-55788003 | Msa0336390:intron | 25.0% |
| !!! | TAAGGACATATTACTGATTT+TGG | + | chr2_4:55788163-55788182 | Msa0336390:intron | 25.0% |
| ! | ATAGTATGTTCCTTAATAAG+TGG | + | chr2_4:55788254-55788273 | Msa0336390:intron | 25.0% |
| ! | CATGCTTTGATATTTCATTT+AGG | + | chr2_4:55788439-55788458 | Msa0336390:intron | 25.0% |
| ! | TTTGCTTATTCTTACTTCAA+AGG | - | chr2_4:55788580-55788599 | None:intergenic | 25.0% |
| ! | TGAAGTAAGAATAAGCAAAA+AGG | + | chr2_4:55788581-55788600 | Msa0336390:CDS | 25.0% |
| ! | CTAAAAATAAATTGAAAGGG+GGG | - | chr2_4:55788643-55788662 | None:intergenic | 25.0% |
| ! | GCTAAAAATAAATTGAAAGG+GGG | - | chr2_4:55788644-55788663 | None:intergenic | 25.0% |
| ! | GTATAAAACAACAATGATAG+AGG | - | chr2_4:55788796-55788815 | None:intergenic | 25.0% |
| !! | TTTTATACTCATTAAAGGAC+TGG | + | chr2_4:55788808-55788827 | Msa0336390:intron | 25.0% |
| ! | ACATTGTCTTCAAAAACTAT+AGG | - | chr2_4:55788902-55788921 | None:intergenic | 25.0% |
| !! | ACACTCATTTCATTCTTTTT+AGG | + | chr2_4:55789057-55789076 | Msa0336390:intron | 25.0% |
| !!! | TCATATAACCTTGCTTTTTA+GGG | + | chr2_4:55789266-55789285 | Msa0336390:CDS | 25.0% |
| ! | CATGTGATCAAATATTAGTT+TGG | + | chr2_4:55789833-55789852 | Msa0336390:intron | 25.0% |
| !! | TTTTACATTAGATTTGTCGA+GGG | + | chr2_4:55790108-55790127 | Msa0336390:intron | 25.0% |
| !!! | ATCTATTAGTTTTATGTGTC+AGG | + | chr2_4:55790713-55790732 | Msa0336390:intron | 25.0% |
| ! | AGATTTACTTAGGAAGTTAT+GGG | + | chr2_4:55790829-55790848 | Msa0336390:CDS | 25.0% |
| ! | CAAATATTGTAGACAATGTA+AGG | - | chr2_4:55791019-55791038 | None:intergenic | 25.0% |
| ! | GATACATAAATGATACATGA+TGG | + | chr2_4:55791278-55791297 | Msa0336390:intron | 25.0% |
| GAGCCATTTCTATACAAAAT+TGG | - | chr2_4:55787990-55788009 | None:intergenic | 30.0% | |
| GGCGATAATCACATATTAAT+GGG | - | chr2_4:55788018-55788037 | None:intergenic | 30.0% | |
| AGGCGATAATCACATATTAA+TGG | - | chr2_4:55788019-55788038 | None:intergenic | 30.0% | |
| TTTACGTATAACTAACATGC+CGG | - | chr2_4:55788111-55788130 | None:intergenic | 30.0% | |
| AATCTCTGATCCACTTATTA+AGG | - | chr2_4:55788267-55788286 | None:intergenic | 30.0% | |
| AGTACAGAACAAACTACATA+TGG | - | chr2_4:55788395-55788414 | None:intergenic | 30.0% | |
| ! | TAGTGGTAAGGCATTTAATT+TGG | + | chr2_4:55788687-55788706 | Msa0336390:intron | 30.0% |
| !! | TGTGTAGTTATGTTGTTTCA+TGG | + | chr2_4:55788716-55788735 | Msa0336390:intron | 30.0% |
| GTATTATTCATTCCTCATTC+AGG | + | chr2_4:55788847-55788866 | Msa0336390:intron | 30.0% | |
| TACTTATGTGTGTTTGTGAT+TGG | + | chr2_4:55789165-55789184 | Msa0336390:intron | 30.0% | |
| CTGAACTAAATTGACAACTT+TGG | + | chr2_4:55789203-55789222 | Msa0336390:intron | 30.0% | |
| ! | TATTGTACAGTTACGCATTT+TGG | + | chr2_4:55789233-55789252 | Msa0336390:intron | 30.0% |
| !!! | GTCATATAACCTTGCTTTTT+AGG | + | chr2_4:55789265-55789284 | Msa0336390:CDS | 30.0% |
| CAGAATGCTTAATCATCAAA+GGG | - | chr2_4:55789476-55789495 | None:intergenic | 30.0% | |
| ACAGAATGCTTAATCATCAA+AGG | - | chr2_4:55789477-55789496 | None:intergenic | 30.0% | |
| ! | TTTTTGCAGATTGAGAGTTT+TGG | + | chr2_4:55789509-55789528 | Msa0336390:intron | 30.0% |
| ! | TTTTGCAGATTGAGAGTTTT+GGG | + | chr2_4:55789510-55789529 | Msa0336390:intron | 30.0% |
| AGCATATGATCTGTGTTAAT+TGG | + | chr2_4:55789706-55789725 | Msa0336390:intron | 30.0% | |
| GTTGTATAAGGAAAATCTGA+AGG | - | chr2_4:55789910-55789929 | None:intergenic | 30.0% | |
| GTTGATACTTGAAATAAAGC+AGG | - | chr2_4:55790063-55790082 | None:intergenic | 30.0% | |
| CTCGACAAATCTAATGTAAA+AGG | - | chr2_4:55790109-55790128 | None:intergenic | 30.0% | |
| ! | CTTTTACATTAGATTTGTCG+AGG | + | chr2_4:55790107-55790126 | Msa0336390:intron | 30.0% |
| TTATGCATACAGGTACAATA+AGG | - | chr2_4:55790160-55790179 | None:intergenic | 30.0% | |
| CTTAATGCATTTATGCATAC+AGG | - | chr2_4:55790170-55790189 | None:intergenic | 30.0% | |
| CAGTATCTTATGAGAACTAT+TGG | + | chr2_4:55790294-55790313 | Msa0336390:intron | 30.0% | |
| AAAGTTAGTATGGCTCATAA+GGG | - | chr2_4:55790339-55790358 | None:intergenic | 30.0% | |
| AAAAGTTAGTATGGCTCATA+AGG | - | chr2_4:55790340-55790359 | None:intergenic | 30.0% | |
| CGACATAGTAAAAGTTAGTA+TGG | - | chr2_4:55790349-55790368 | None:intergenic | 30.0% | |
| !! | TTCTGGAATTGCAAGTTTAT+GGG | + | chr2_4:55790383-55790402 | Msa0336390:CDS | 30.0% |
| AGTTCTTTGACATTCTGTTT+AGG | + | chr2_4:55790496-55790515 | Msa0336390:CDS | 30.0% | |
| TCATAAAGCAAGTATTTCCT+AGG | - | chr2_4:55790564-55790583 | None:intergenic | 30.0% | |
| AGAAAATAGTCAACAAGCTT+CGG | - | chr2_4:55790616-55790635 | None:intergenic | 30.0% | |
| ! | TTTTATGTGTCAGGATTTTC+TGG | + | chr2_4:55790722-55790741 | Msa0336390:intron | 30.0% |
| GTCACTAAATATTCCTTTCT+CGG | + | chr2_4:55790769-55790788 | Msa0336390:intron | 30.0% | |
| GAGATTTACTTAGGAAGTTA+TGG | + | chr2_4:55790828-55790847 | Msa0336390:CDS | 30.0% | |
| GCTTAAGACATAGAAAGAAA+GGG | - | chr2_4:55790964-55790983 | None:intergenic | 30.0% | |
| AGCTTAAGACATAGAAAGAA+AGG | - | chr2_4:55790965-55790984 | None:intergenic | 30.0% | |
| ! | CTTTCTATGTCTTAAGCTTT+TGG | + | chr2_4:55790967-55790986 | Msa0336390:intron | 30.0% |
| ATGTATCTTTCTTTCTCAAC+AGG | + | chr2_4:55791042-55791061 | Msa0336390:intron | 30.0% | |
| ! | CTTCTTGCATTTTTATTGGA+CGG | + | chr2_4:55791067-55791086 | Msa0336390:CDS | 30.0% |
| AAATGAGATGAGTACATACT+TGG | - | chr2_4:55791234-55791253 | None:intergenic | 30.0% | |
| ATCAAGACATTACTGCATTA+CGG | + | chr2_4:55791473-55791492 | Msa0336390:CDS | 30.0% | |
| TTTGATACTCAGGGATAATA+TGG | - | chr2_4:55791676-55791695 | None:intergenic | 30.0% | |
| TATTATCCCTGAGTATCAAA+CGG | + | chr2_4:55791676-55791695 | Msa0336390:CDS | 30.0% | |
| AGAGTATGTATAATGCTGTT+AGG | + | chr2_4:55791702-55791721 | Msa0336390:CDS | 30.0% | |
| TATAATGCTGTTAGGAGATT+TGG | + | chr2_4:55791710-55791729 | Msa0336390:CDS | 30.0% | |
| ATAATGCTGTTAGGAGATTT+GGG | + | chr2_4:55791711-55791730 | Msa0336390:CDS | 30.0% | |
| TTAAATTTGGAGATGGTGAT+GGG | + | chr2_4:55791798-55791817 | Msa0336390:CDS | 30.0% | |
| GTTTGATCCGGATATTTATA+CGG | + | chr2_4:55791832-55791851 | Msa0336390:CDS | 30.0% | |
| !! | TTGTTGTTGTTGTTTGAGTC+TGG | - | chr2_4:55787089-55787108 | None:intergenic | 35.0% |
| !! | TGAAGAGCATTGATGAATGA+TGG | + | chr2_4:55787300-55787319 | Msa0336390:intron | 35.0% |
| TTCTTCTTATCCAAATCCAC+TGG | - | chr2_4:55787385-55787404 | None:intergenic | 35.0% | |
| ! | AGTGGATTTGGATAAGAAGA+AGG | + | chr2_4:55787384-55787403 | Msa0336390:CDS | 35.0% |
| GTGGATTTGGATAAGAAGAA+GGG | + | chr2_4:55787385-55787404 | Msa0336390:CDS | 35.0% | |
| TGGATTTGGATAAGAAGAAG+GGG | + | chr2_4:55787386-55787405 | Msa0336390:CDS | 35.0% | |
| ! | GATTTTTGTGTGAGCAATGA+TGG | + | chr2_4:55787638-55787657 | Msa0336390:intron | 35.0% |
| AGTTAGATTGTTCCATGATG+CGG | + | chr2_4:55787690-55787709 | Msa0336390:intron | 35.0% | |
| GAAATAAAAATGCCGCATCA+TGG | - | chr2_4:55787705-55787724 | None:intergenic | 35.0% | |
| CTTTGTGTGATTTAGGTAGT+TGG | + | chr2_4:55787755-55787774 | Msa0336390:intron | 35.0% | |
| ! | CAGTCAAGTGTTACTCATTT+AGG | - | chr2_4:55788039-55788058 | None:intergenic | 35.0% |
| !! | CTCTCGAACTTTAAAACAAC+CGG | + | chr2_4:55788089-55788108 | Msa0336390:intron | 35.0% |
| ! | AGGAACATACTATTTGCTAC+TGG | - | chr2_4:55788247-55788266 | None:intergenic | 35.0% |
| ACAGAACAAACTACATATGG+TGG | - | chr2_4:55788392-55788411 | None:intergenic | 35.0% | |
| AATGCAACGAAAGATGACAA+AGG | + | chr2_4:55788477-55788496 | Msa0336390:CDS | 35.0% | |
| ATGTATATCCTTTACAGCTC+AGG | + | chr2_4:55788529-55788548 | Msa0336390:CDS | 35.0% | |
| !! | TTGTGTCTCTCTTTTAGTTG+TGG | + | chr2_4:55788611-55788630 | Msa0336390:intron | 35.0% |
| AAAATAAATTGAAAGGGGGG+AGG | - | chr2_4:55788640-55788659 | None:intergenic | 35.0% | |
| TTCAGGTGAAACATTGTGTT+TGG | + | chr2_4:55788864-55788883 | Msa0336390:intron | 35.0% | |
| GTGAAACATTGTGTTTGGAT+GGG | + | chr2_4:55788869-55788888 | Msa0336390:intron | 35.0% | |
| TGAAACATTGTGTTTGGATG+GGG | + | chr2_4:55788870-55788889 | Msa0336390:intron | 35.0% | |
| ! | TTACGCATTTTGGACTATTC+AGG | + | chr2_4:55789243-55789262 | Msa0336390:CDS | 35.0% |
| !!! | ATAACCTTGCTTTTTAGGGA+TGG | + | chr2_4:55789270-55789289 | Msa0336390:CDS | 35.0% |
| CATCACTGACATTGGAAAAA+GGG | - | chr2_4:55789432-55789451 | None:intergenic | 35.0% | |
| TCATCACTGACATTGGAAAA+AGG | - | chr2_4:55789433-55789452 | None:intergenic | 35.0% | |
| ACACTATTCAGTAAATGTGC+AGG | + | chr2_4:55789771-55789790 | Msa0336390:intron | 35.0% | |
| TGTGCAGGATAGAATAGTTA+AGG | + | chr2_4:55789786-55789805 | Msa0336390:intron | 35.0% | |
| AAAAGGTCAATTCTCACTAC+AGG | - | chr2_4:55790092-55790111 | None:intergenic | 35.0% | |
| TCGATACATACAGAATCTTC+TGG | + | chr2_4:55790366-55790385 | Msa0336390:intron | 35.0% | |
| !! | CTTCTGGAATTGCAAGTTTA+TGG | + | chr2_4:55790382-55790401 | Msa0336390:CDS | 35.0% |
| AGTGCTTCAATGAAGATGAA+TGG | + | chr2_4:55790451-55790470 | Msa0336390:CDS | 35.0% | |
| CTAACTGGATTACAAAACCT+AGG | + | chr2_4:55790544-55790563 | Msa0336390:CDS | 35.0% | |
| !!! | GAAGCTTGTTGACTATTTTC+TGG | + | chr2_4:55790615-55790634 | Msa0336390:CDS | 35.0% |
| AATCAATTCTGACAACCCAT+TGG | + | chr2_4:55790654-55790673 | Msa0336390:CDS | 35.0% | |
| ATCAATTCTGACAACCCATT+GGG | + | chr2_4:55790655-55790674 | Msa0336390:CDS | 35.0% | |
| !! | AGCTTTGATTTGAACATCCT+TGG | - | chr2_4:55790878-55790897 | None:intergenic | 35.0% |
| TGATTAAACCCACTAAACTG+AGG | - | chr2_4:55790914-55790933 | None:intergenic | 35.0% | |
| !!! | CTTAAGCTTTTGGCTTTACA+AGG | + | chr2_4:55790977-55790996 | Msa0336390:intron | 35.0% |
| ! | GGAGCTTCTTGCATTTTTAT+TGG | + | chr2_4:55791063-55791082 | Msa0336390:intron | 35.0% |
| AAGAAGTTGCCGATGAATAT+TGG | + | chr2_4:55791164-55791183 | Msa0336390:CDS | 35.0% | |
| !! | TTCGGAGGGTTATGTTTTAA+CGG | + | chr2_4:55791565-55791584 | Msa0336390:CDS | 35.0% |
| !!! | GGGTTATGTTTTAACGGTTT+TGG | + | chr2_4:55791571-55791590 | Msa0336390:CDS | 35.0% |
| TGGTAATACATTATCTCCTC+CGG | - | chr2_4:55791656-55791675 | None:intergenic | 35.0% | |
| ! | AGGTTAGTTATGAGACTTTG+AGG | + | chr2_4:55791735-55791754 | Msa0336390:CDS | 35.0% |
| !! | GACTTTGAGGTTGAAGTATA+AGG | + | chr2_4:55791748-55791767 | Msa0336390:CDS | 35.0% |
| GTTAAATTTGGAGATGGTGA+TGG | + | chr2_4:55791797-55791816 | Msa0336390:CDS | 35.0% | |
| ATCCGGATATTTATACGGAT+GGG | + | chr2_4:55791837-55791856 | Msa0336390:CDS | 35.0% | |
| ATTTCTGTTCAAGGGATTGA+TGG | + | chr2_4:55791863-55791882 | Msa0336390:CDS | 35.0% | |
| TTTCTGTTCAAGGGATTGAT+GGG | + | chr2_4:55791864-55791883 | Msa0336390:CDS | 35.0% | |
| GTTAAACCCATTTCGATGAT+GGG | + | chr2_4:55791932-55791951 | Msa0336390:CDS | 35.0% | |
| AGAGAGAGAGAGAAAGGAAT+GGG | - | chr2_4:55786961-55786980 | None:intergenic | 40.0% | |
| TAAGAGAGAGAGAGAGAGAA+AGG | - | chr2_4:55786967-55786986 | None:intergenic | 40.0% | |
| TGTTCCTCAGAAGATTCTTC+AGG | + | chr2_4:55787050-55787069 | Msa0336390:CDS | 40.0% | |
| GTTACCTGAAGAATCTTCTG+AGG | - | chr2_4:55787057-55787076 | None:intergenic | 40.0% | |
| TATTTCGTTCCTCACAGGTT+AGG | + | chr2_4:55787122-55787141 | Msa0336390:intron | 40.0% | |
| ATTTCGTTCCTCACAGGTTA+GGG | + | chr2_4:55787123-55787142 | Msa0336390:intron | 40.0% | |
| GATTGTATATGCATCTTCGC+CGG | + | chr2_4:55787408-55787427 | Msa0336390:CDS | 40.0% | |
| ATTGTATATGCATCTTCGCC+GGG | + | chr2_4:55787409-55787428 | Msa0336390:CDS | 40.0% | |
| CGTGTTTAATCTTCAGAGAG+AGG | + | chr2_4:55787483-55787502 | Msa0336390:CDS | 40.0% | |
| !! | TTCTGGAAGGGATTTTGCTT+TGG | + | chr2_4:55787546-55787565 | Msa0336390:CDS | 40.0% |
| !! | AGGGATTTTGCTTTGGTTTC+TGG | + | chr2_4:55787553-55787572 | Msa0336390:CDS | 40.0% |
| ATTCTAGCCGTTCGTATCTA+TGG | + | chr2_4:55787804-55787823 | Msa0336390:intron | 40.0% | |
| AACAGGACCATAGATACGAA+CGG | - | chr2_4:55787814-55787833 | None:intergenic | 40.0% | |
| ! | TACTTTAGGGACTGATGTTG+TGG | + | chr2_4:55787877-55787896 | Msa0336390:intron | 40.0% |
| TAACACTTGACTGTTCTGCA+TGG | + | chr2_4:55788046-55788065 | Msa0336390:intron | 40.0% | |
| TACATCTCCCATATCAGTGT+CGG | - | chr2_4:55788514-55788533 | None:intergenic | 40.0% | |
| CCTTACCACTAGTTACATCA+TGG | - | chr2_4:55788678-55788697 | None:intergenic | 40.0% | |
| CCATGATGTAACTAGTGGTA+AGG | + | chr2_4:55788675-55788694 | Msa0336390:intron | 40.0% | |
| GAAGTGAGAACTGAGATGTT+AGG | + | chr2_4:55788747-55788766 | Msa0336390:intron | 40.0% | |
| CACAATGTTTCACCTGAATG+AGG | - | chr2_4:55788862-55788881 | None:intergenic | 40.0% | |
| GGTGAAACATTGTGTTTGGA+TGG | + | chr2_4:55788868-55788887 | Msa0336390:intron | 40.0% | |
| CACACATCACGAAGAAATCA+TGG | + | chr2_4:55788985-55789004 | Msa0336390:intron | 40.0% | |
| CTGACATTGGAAAAAGGGAA+AGG | - | chr2_4:55789427-55789446 | None:intergenic | 40.0% | |
| CAGATACTCATCACTGACAT+TGG | - | chr2_4:55789440-55789459 | None:intergenic | 40.0% | |
| GCTTAATCATCAAAGGGTTG+TGG | - | chr2_4:55789470-55789489 | None:intergenic | 40.0% | |
| ! | CTGCATCAAGTTTAGAATGC+AGG | + | chr2_4:55789573-55789592 | Msa0336390:intron | 40.0% |
| GAGAGAGAGATCGTTGTATA+AGG | - | chr2_4:55789922-55789941 | None:intergenic | 40.0% | |
| TGTCAGACTCAATGAGATGT+AGG | + | chr2_4:55790407-55790426 | Msa0336390:CDS | 40.0% | |
| GTCAGACTCAATGAGATGTA+GGG | + | chr2_4:55790408-55790427 | Msa0336390:CDS | 40.0% | |
| ACTCAATGAGATGTAGGGAA+GGG | + | chr2_4:55790413-55790432 | Msa0336390:CDS | 40.0% | |
| AGGGAAGGGAAAAAAGATTC+TGG | + | chr2_4:55790427-55790446 | Msa0336390:CDS | 40.0% | |
| TTGTAATCCAGTTAGTCCCA+AGG | - | chr2_4:55790539-55790558 | None:intergenic | 40.0% | |
| !! | CGTATGTGTTAAGCACTGAA+GGG | - | chr2_4:55790593-55790612 | None:intergenic | 40.0% |
| ACTAAACTGAGGTGCAAATC+TGG | - | chr2_4:55790903-55790922 | None:intergenic | 40.0% | |
| AGATTTGCACCTCAGTTTAG+TGG | + | chr2_4:55790902-55790921 | Msa0336390:CDS | 40.0% | |
| GATTTGCACCTCAGTTTAGT+GGG | + | chr2_4:55790903-55790922 | Msa0336390:CDS | 40.0% | |
| GATTCCCAAGTTAGTGAATC+TGG | + | chr2_4:55790938-55790957 | Msa0336390:intron | 40.0% | |
| GTAGACAATGTAAGGATGCA+TGG | - | chr2_4:55791011-55791030 | None:intergenic | 40.0% | |
| TAAGCCTTACGTAGAAGCAA+AGG | + | chr2_4:55791120-55791139 | Msa0336390:CDS | 40.0% | |
| TCAACAACCATGACACTAAG+AGG | - | chr2_4:55791310-55791329 | None:intergenic | 40.0% | |
| AAGACATTACTGCATTACGG+TGG | + | chr2_4:55791476-55791495 | Msa0336390:CDS | 40.0% | |
| TTACGGTGGTTACAACGAAA+TGG | + | chr2_4:55791490-55791509 | Msa0336390:CDS | 40.0% | |
| ! | GGAGATGAGTCGTTTAGTTT+CGG | + | chr2_4:55791547-55791566 | Msa0336390:CDS | 40.0% |
| ! | ATGAGTCGTTTAGTTTCGGA+GGG | + | chr2_4:55791551-55791570 | Msa0336390:CDS | 40.0% |
| TCTCTTCCGTTTGATACTCA+GGG | - | chr2_4:55791685-55791704 | None:intergenic | 40.0% | |
| GAGGTTGAAGTATAAGGTTG+TGG | + | chr2_4:55791754-55791773 | Msa0336390:CDS | 40.0% | |
| GTCGGGTTATTTGTTTGATC+CGG | + | chr2_4:55791820-55791839 | Msa0336390:CDS | 40.0% | |
| GATCCGGATATTTATACGGA+TGG | + | chr2_4:55791836-55791855 | Msa0336390:CDS | 40.0% | |
| CTCCCATCCGTATAAATATC+CGG | - | chr2_4:55791842-55791861 | None:intergenic | 40.0% | |
| ATGGGAGGATTTCTGTTCAA+GGG | + | chr2_4:55791855-55791874 | Msa0336390:CDS | 40.0% | |
| TTCTGTTCAAGGGATTGATG+GGG | + | chr2_4:55791865-55791884 | Msa0336390:CDS | 40.0% | |
| GGTTAAACCCATTTCGATGA+TGG | + | chr2_4:55791931-55791950 | Msa0336390:CDS | 40.0% | |
| GAGAGAGAGAGAGAAAGGAA+TGG | - | chr2_4:55786962-55786981 | None:intergenic | 45.0% | |
| CTGAGGAACACTCCATTGTA+GGG | - | chr2_4:55787040-55787059 | None:intergenic | 45.0% | |
| TCTGAGGAACACTCCATTGT+AGG | - | chr2_4:55787041-55787060 | None:intergenic | 45.0% | |
| GAGTCTATTTCGTTCCTCAC+AGG | + | chr2_4:55787117-55787136 | Msa0336390:CDS | 45.0% | |
| TGTATGAACCCTAACCTGTG+AGG | - | chr2_4:55787134-55787153 | None:intergenic | 45.0% | |
| TGTGTGTGTGTGTGTGTTTC+AGG | + | chr2_4:55787332-55787351 | Msa0336390:intron | 45.0% | |
| ! | AGATGCAATGCCAGTGGATT+TGG | + | chr2_4:55787372-55787391 | Msa0336390:CDS | 45.0% |
| ATAGGACCGTATGATGAACC+CGG | - | chr2_4:55787430-55787449 | None:intergenic | 45.0% | |
| TTCAGAGAGAGGAAGAATCG+CGG | + | chr2_4:55787494-55787513 | Msa0336390:CDS | 45.0% | |
| !! | GCTTTGGAAAACGGTGAAGT+GGG | + | chr2_4:55787520-55787539 | Msa0336390:CDS | 45.0% |
| !! | TGAAGTGGGTGTTTCTGGAA+GGG | + | chr2_4:55787534-55787553 | Msa0336390:CDS | 45.0% |
| !! | CTTTGGTTTCTGGTGACATG+TGG | + | chr2_4:55787563-55787582 | Msa0336390:CDS | 45.0% |
| GACTGATGTTGTGGATGAGA+AGG | + | chr2_4:55787886-55787905 | Msa0336390:intron | 45.0% | |
| TTCAGCAACCGACACTGATA+TGG | + | chr2_4:55788503-55788522 | Msa0336390:CDS | 45.0% | |
| TCAGCAACCGACACTGATAT+GGG | + | chr2_4:55788504-55788523 | Msa0336390:CDS | 45.0% | |
| ACAGAAAGCCTGAGCTGTAA+AGG | - | chr2_4:55788540-55788559 | None:intergenic | 45.0% | |
| AGCTCAGGCTTTCTGTTCAA+AGG | + | chr2_4:55788544-55788563 | Msa0336390:CDS | 45.0% | |
| GCTCAGGCTTTCTGTTCAAA+GGG | + | chr2_4:55788545-55788564 | Msa0336390:CDS | 45.0% | |
| CCACTAGTTACATCATGGAC+AGG | - | chr2_4:55788673-55788692 | None:intergenic | 45.0% | |
| CCTGTCCATGATGTAACTAG+TGG | + | chr2_4:55788670-55788689 | Msa0336390:intron | 45.0% | |
| ATCCACACTGAACAGTTTGC+AGG | - | chr2_4:55789110-55789129 | None:intergenic | 45.0% | |
| GTTCAGTGTGGATTCAGAGA+TGG | + | chr2_4:55789117-55789136 | Msa0336390:CDS | 45.0% | |
| TTCGCCATCCCTAAAAAGCA+AGG | - | chr2_4:55789277-55789296 | None:intergenic | 45.0% | |
| CAGTGCTTGTCGTGTACAAT+AGG | - | chr2_4:55789600-55789619 | None:intergenic | 45.0% | |
| TTCTCCCTATGACTCTTGCT+TGG | + | chr2_4:55789626-55789645 | Msa0336390:intron | 45.0% | |
| TCTCCCTATGACTCTTGCTT+GGG | + | chr2_4:55789627-55789646 | Msa0336390:intron | 45.0% | |
| GAACCCAAGCAAGAGTCATA+GGG | - | chr2_4:55789633-55789652 | None:intergenic | 45.0% | |
| CAATTCTCACTACAGGACAC+AGG | - | chr2_4:55790085-55790104 | None:intergenic | 45.0% | |
| AAAGAGGGACACACAAGACA+AGG | - | chr2_4:55790245-55790264 | None:intergenic | 45.0% | |
| GTCTTGTGTGTCCCTCTTTA+TGG | + | chr2_4:55790246-55790265 | Msa0336390:intron | 45.0% | |
| GACTCAATGAGATGTAGGGA+AGG | + | chr2_4:55790412-55790431 | Msa0336390:CDS | 45.0% | |
| TTGACATTCTGTTTAGGCCC+TGG | + | chr2_4:55790502-55790521 | Msa0336390:CDS | 45.0% | |
| !! | GCGTATGTGTTAAGCACTGA+AGG | - | chr2_4:55790594-55790613 | None:intergenic | 45.0% |
| CACATACGTTCATGCCCAAT+GGG | - | chr2_4:55790672-55790691 | None:intergenic | 45.0% | |
| TCACATACGTTCATGCCCAA+TGG | - | chr2_4:55790673-55790692 | None:intergenic | 45.0% | |
| !! | ATGTGTCAGGATTTTCTGGC+TGG | + | chr2_4:55790726-55790745 | Msa0336390:intron | 45.0% |
| !!! | TGTGTCAGGATTTTCTGGCT+GGG | + | chr2_4:55790727-55790746 | Msa0336390:intron | 45.0% |
| TGGCAAAGAAAAGCCGAGAA+AGG | - | chr2_4:55790785-55790804 | None:intergenic | 45.0% | |
| ! | TTTCTCGGCTTTTCTTTGCC+AGG | + | chr2_4:55790784-55790803 | Msa0336390:intron | 45.0% |
| ! | TTCTCGGCTTTTCTTTGCCA+GGG | + | chr2_4:55790785-55790804 | Msa0336390:intron | 45.0% |
| CGGCGTTTGGAGATTTACTT+AGG | + | chr2_4:55790819-55790838 | Msa0336390:CDS | 45.0% | |
| AGGGCCAGATTCACTAACTT+GGG | - | chr2_4:55790945-55790964 | None:intergenic | 45.0% | |
| AAGGGCCAGATTCACTAACT+TGG | - | chr2_4:55790946-55790965 | None:intergenic | 45.0% | |
| CCATCCTTTGCTTCTACGTA+AGG | - | chr2_4:55791127-55791146 | None:intergenic | 45.0% | |
| CCTTACGTAGAAGCAAAGGA+TGG | + | chr2_4:55791124-55791143 | Msa0336390:CDS | 45.0% | |
| GTAGAAGCAAAGGATGGAGA+TGG | + | chr2_4:55791130-55791149 | Msa0336390:CDS | 45.0% | |
| TCATCGGCAACTTCTTCATC+TGG | - | chr2_4:55791160-55791179 | None:intergenic | 45.0% | |
| GGAAGAACCTCTTAGTGTCA+TGG | + | chr2_4:55791300-55791319 | Msa0336390:intron | 45.0% | |
| AAACCTAACGTCGTTAGCGA+CGG | + | chr2_4:55791526-55791545 | Msa0336390:CDS | 45.0% | |
| ! | GATGAGTCGTTTAGTTTCGG+AGG | + | chr2_4:55791550-55791569 | Msa0336390:CDS | 45.0% |
| TTCGCCATTGCTTCGTCATT+CGG | - | chr2_4:55791599-55791618 | None:intergenic | 45.0% | |
| AGCAATGGCGAAGTTAACGA+CGG | + | chr2_4:55791607-55791626 | Msa0336390:CDS | 45.0% | |
| CTCTCTTCCGTTTGATACTC+AGG | - | chr2_4:55791686-55791705 | None:intergenic | 45.0% | |
| TGCTGTTAGGAGATTTGGGA+AGG | + | chr2_4:55791715-55791734 | Msa0336390:CDS | 45.0% | |
| GAAGTATAAGGTTGTGGCTC+AGG | + | chr2_4:55791760-55791779 | Msa0336390:CDS | 45.0% | |
| ! | GCTGATGGGTCGGTTAAATT+TGG | + | chr2_4:55791785-55791804 | Msa0336390:CDS | 45.0% |
| GGGTCGGTTAAATTTGGAGA+TGG | + | chr2_4:55791791-55791810 | Msa0336390:CDS | 45.0% | |
| !! | ATTTGGAGATGGTGATGGGT+CGG | + | chr2_4:55791802-55791821 | Msa0336390:CDS | 45.0% |
| CGGATATTTATACGGATGGG+AGG | + | chr2_4:55791840-55791859 | Msa0336390:CDS | 45.0% | |
| GATGGGAGGATTTCTGTTCA+AGG | + | chr2_4:55791854-55791873 | Msa0336390:CDS | 45.0% | |
| !!! | TGGGGTTTTGTTTCCTGTGA+AGG | + | chr2_4:55791883-55791902 | Msa0336390:CDS | 45.0% |
| GTTTCCTGTGAAGGAGAAAG+AGG | + | chr2_4:55791892-55791911 | Msa0336390:CDS | 45.0% | |
| ACAACCTCTTTCTCCTTCAC+AGG | - | chr2_4:55791899-55791918 | None:intergenic | 45.0% | |
| GGTTGACCCATCATCGAAAT+GGG | - | chr2_4:55791941-55791960 | None:intergenic | 45.0% | |
| ! | TGTTCAACGACGCTTTTCCT+GGG | - | chr2_4:55791962-55791981 | None:intergenic | 45.0% |
| ! | ATGTTCAACGACGCTTTTCC+TGG | - | chr2_4:55791963-55791982 | None:intergenic | 45.0% |
| AGCGTCGTTGAACATAGAAG+AGG | + | chr2_4:55791968-55791987 | Msa0336390:CDS | 45.0% | |
| GTGTGTGTGTGTGTTTCAGG+TGG | + | chr2_4:55787335-55787354 | Msa0336390:intron | 50.0% | |
| ! | TGTGTGTGTGTTTCAGGTGG+TGG | + | chr2_4:55787338-55787357 | Msa0336390:intron | 50.0% |
| !! | TGTGTGTTTCAGGTGGTGGA+AGG | + | chr2_4:55787342-55787361 | Msa0336390:intron | 50.0% |
| TGCACAAGATGCAATGCCAG+TGG | + | chr2_4:55787366-55787385 | Msa0336390:CDS | 50.0% | |
| TCTTCGCCGGGTTCATCATA+CGG | + | chr2_4:55787421-55787440 | Msa0336390:CDS | 50.0% | |
| !! | TCGCGGAACGCTTTGGAAAA+CGG | + | chr2_4:55787511-55787530 | Msa0336390:CDS | 50.0% |
| !! | CGCTTTGGAAAACGGTGAAG+TGG | + | chr2_4:55787519-55787538 | Msa0336390:CDS | 50.0% |
| AACGGTGAAGTGGGTGTTTC+TGG | + | chr2_4:55787529-55787548 | Msa0336390:CDS | 50.0% | |
| !! | GTGAAGTGGGTGTTTCTGGA+AGG | + | chr2_4:55787533-55787552 | Msa0336390:CDS | 50.0% |
| TTCTGGTGACATGTGGTTGC+AGG | + | chr2_4:55787570-55787589 | Msa0336390:CDS | 50.0% | |
| AGCCTGCAAACTGTTCAGTG+TGG | + | chr2_4:55789105-55789124 | Msa0336390:CDS | 50.0% | |
| ATGTGCCCACAGACTCTCAA+AGG | + | chr2_4:55789301-55789320 | Msa0336390:CDS | 50.0% | |
| ! | GACTGCCTTTGAGAGTCTGT+GGG | - | chr2_4:55789309-55789328 | None:intergenic | 50.0% |
| ! | AGACTGCCTTTGAGAGTCTG+TGG | - | chr2_4:55789310-55789329 | None:intergenic | 50.0% |
| CTCTCAAAGGCAGTCTGATC+AGG | + | chr2_4:55789314-55789333 | Msa0336390:CDS | 50.0% | |
| TCAAAGGCAGTCTGATCAGG+AGG | + | chr2_4:55789317-55789336 | Msa0336390:CDS | 50.0% | |
| ! | CAGTCTGATCAGGAGGTATG+CGG | + | chr2_4:55789324-55789343 | Msa0336390:intron | 50.0% |
| GGAACCCAAGCAAGAGTCAT+AGG | - | chr2_4:55789634-55789653 | None:intergenic | 50.0% | |
| CTTAGGAAGTTATGGGCTCC+TGG | + | chr2_4:55790836-55790855 | Msa0336390:CDS | 50.0% | |
| !! | TTGAACATCCTTGGTGCCAC+AGG | - | chr2_4:55790869-55790888 | None:intergenic | 50.0% |
| CGGTGGTTACAACGAAATGG+CGG | + | chr2_4:55791493-55791512 | Msa0336390:CDS | 50.0% | |
| AATGGCGAAGTTAACGACGG+AGG | + | chr2_4:55791610-55791629 | Msa0336390:CDS | 50.0% | |
| GACGGAGGAGTTAAGTGAAC+CGG | + | chr2_4:55791625-55791644 | Msa0336390:CDS | 50.0% | |
| ACGGAGGAGTTAAGTGAACC+GGG | + | chr2_4:55791626-55791645 | Msa0336390:CDS | 50.0% | |
| GTTAAGTGAACCGGGTTCAC+CGG | + | chr2_4:55791634-55791653 | Msa0336390:CDS | 50.0% | |
| ATTATCTCCTCCGGTGAACC+CGG | - | chr2_4:55791647-55791666 | None:intergenic | 50.0% | |
| TTGTGGCTCAGGAAGCTGAT+GGG | + | chr2_4:55791771-55791790 | Msa0336390:CDS | 50.0% | |
| !! | TTTGGAGATGGTGATGGGTC+GGG | + | chr2_4:55791803-55791822 | Msa0336390:CDS | 50.0% |
| GAAGGAGAAAGAGGTTGTGC+CGG | + | chr2_4:55791901-55791920 | Msa0336390:CDS | 50.0% | |
| GGGTTGACCCATCATCGAAA+TGG | - | chr2_4:55791942-55791961 | None:intergenic | 50.0% | |
| !! | TTTCGATGATGGGTCAACCC+AGG | + | chr2_4:55791942-55791961 | Msa0336390:CDS | 50.0% |
| GAGGTGCGTTACTACTTCCT+CGG | + | chr2_4:55791987-55792006 | Msa0336390:CDS | 50.0% | |
| GGAAGAATCGCGGAACGCTT+TGG | + | chr2_4:55787504-55787523 | Msa0336390:CDS | 55.0% | |
| TGTGGTTGCAGGCACTCAAG+TGG | + | chr2_4:55787581-55787600 | Msa0336390:CDS | 55.0% | |
| TGTTTAGGCCCTGGTGAAGC+TGG | + | chr2_4:55790511-55790530 | Msa0336390:CDS | 55.0% | |
| CCAAGGAACCAGCTTCACCA+GGG | - | chr2_4:55790522-55790541 | None:intergenic | 55.0% | |
| ! | CCTGGTGAAGCTGGTTCCTT+GGG | + | chr2_4:55790520-55790539 | Msa0336390:CDS | 55.0% |
| ! | GCTGGTTCCTTGGGACTAAC+TGG | + | chr2_4:55790529-55790548 | Msa0336390:CDS | 55.0% |
| TTGCCAGGGTGAGATAGCGT+CGG | + | chr2_4:55790799-55790818 | Msa0336390:intron | 55.0% | |
| TCTCCGTCGCTAACGACGTT+AGG | - | chr2_4:55791532-55791551 | None:intergenic | 55.0% | |
| GGCTCCGAATGACGAAGCAA+TGG | + | chr2_4:55791592-55791611 | Msa0336390:CDS | 55.0% | |
| GTTGTGGCTCAGGAAGCTGA+TGG | + | chr2_4:55791770-55791789 | Msa0336390:CDS | 55.0% | |
| ATGGGTTTAACCCGCTCCAC+CGG | - | chr2_4:55791923-55791942 | None:intergenic | 55.0% | |
| ! | CCCTGGTGAAGCTGGTTCCT+TGG | + | chr2_4:55790519-55790538 | Msa0336390:CDS | 60.0% |
| CCCAAGGAACCAGCTTCACC+AGG | - | chr2_4:55790523-55790542 | None:intergenic | 60.0% | |
| !! | GGTGAGATAGCGTCGGCGTT+TGG | + | chr2_4:55790806-55790825 | Msa0336390:CDS | 60.0% |
| AAGTGAACCGGGTTCACCGG+AGG | + | chr2_4:55791637-55791656 | Msa0336390:CDS | 60.0% | |
| ! | GGCTCAGGAAGCTGATGGGT+CGG | + | chr2_4:55791775-55791794 | Msa0336390:CDS | 60.0% |
| GGAGAAAGAGGTTGTGCCGG+TGG | + | chr2_4:55791904-55791923 | Msa0336390:CDS | 60.0% | |
| ! | AAGAGGTTGTGCCGGTGGAG+CGG | + | chr2_4:55791909-55791928 | Msa0336390:CDS | 60.0% |
| ACGCCGACGCTATCTCACCC+TGG | - | chr2_4:55790805-55790824 | None:intergenic | 65.0% | |
| GCGCAAGTCCTGTGGCACCA+AGG | + | chr2_4:55790858-55790877 | Msa0336390:CDS | 65.0% | |
| ! | AGAGGTTGTGCCGGTGGAGC+GGG | + | chr2_4:55791910-55791929 | Msa0336390:CDS | 65.0% |
| GGCTCCTGGCGCAAGTCCTG+TGG | + | chr2_4:55790850-55790869 | Msa0336390:CDS | 70.0% | |
| ! | GGTGCCACAGGACTTGCGCC+AGG | - | chr2_4:55790857-55790876 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 55786920 | 55792024 | 55786920 | ID=Msa0336390;Name=Msa0336390 |
| chr2_4 | mRNA | 55786920 | 55792024 | 55786920 | ID=Msa0336390-mRNA-1;Parent=Msa0336390;Name=Msa0336390-mRNA-1;_AED=0.17;_eAED=0.17;_QI=124|0.87|0.77|1|1|1|9|0|605 |
| chr2_4 | exon | 55786920 | 55787138 | 55786920 | ID=Msa0336390-mRNA-1:exon:16969;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55787354 | 55787602 | 55787354 | ID=Msa0336390-mRNA-1:exon:16970;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55788461 | 55788602 | 55788461 | ID=Msa0336390-mRNA-1:exon:16971;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55789079 | 55789138 | 55789079 | ID=Msa0336390-mRNA-1:exon:16972;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55789243 | 55789338 | 55789243 | ID=Msa0336390-mRNA-1:exon:16973;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55790379 | 55790684 | 55790379 | ID=Msa0336390-mRNA-1:exon:16974;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55790806 | 55790946 | 55790806 | ID=Msa0336390-mRNA-1:exon:16975;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55791064 | 55791234 | 55791064 | ID=Msa0336390-mRNA-1:exon:16976;Parent=Msa0336390-mRNA-1 |
| chr2_4 | exon | 55791467 | 55792024 | 55791467 | ID=Msa0336390-mRNA-1:exon:16977;Parent=Msa0336390-mRNA-1 |
| chr2_4 | five_prime_UTR | 55786920 | 55787043 | 55786920 | ID=Msa0336390-mRNA-1:five_prime_utr;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55787044 | 55787138 | 55787044 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55787354 | 55787602 | 55787354 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55788461 | 55788602 | 55788461 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55789079 | 55789138 | 55789079 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55789243 | 55789338 | 55789243 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55790379 | 55790684 | 55790379 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55790806 | 55790946 | 55790806 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55791064 | 55791234 | 55791064 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| chr2_4 | CDS | 55791467 | 55792024 | 55791467 | ID=Msa0336390-mRNA-1:cds;Parent=Msa0336390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
