Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307570 | XP_013465941.1 | 99.603 | 252 | 1 | 0 | 1 | 252 | 1 | 252 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307570 | sp|Q9M2Y6|CGR2_ARATH | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.82e-123 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0307570 | 0.825156 | 5.466062e-54 | -8.615850e-47 |
| Msa0001680 | Msa0307570 | 0.806310 | 8.751997e-50 | -8.615850e-47 |
| Msa0002680 | Msa0307570 | 0.875736 | 2.436234e-68 | -8.615850e-47 |
| Msa0002710 | Msa0307570 | 0.848461 | 6.040397e-60 | -8.615850e-47 |
| Msa0011930 | Msa0307570 | 0.831154 | 1.960486e-55 | -8.615850e-47 |
| Msa0012940 | Msa0307570 | 0.855571 | 5.771782e-62 | -8.615850e-47 |
| Msa0014570 | Msa0307570 | 0.811668 | 6.238610e-51 | -8.615850e-47 |
| Msa0027320 | Msa0307570 | 0.807692 | 4.463908e-50 | -8.615850e-47 |
| Msa0031820 | Msa0307570 | 0.802297 | 5.998792e-49 | -8.615850e-47 |
| Msa0032020 | Msa0307570 | 0.831625 | 1.501130e-55 | -8.615850e-47 |
| Msa0032320 | Msa0307570 | 0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0035120 | Msa0307570 | 0.859488 | 3.994545e-63 | -8.615850e-47 |
| Msa0036890 | Msa0307570 | 0.821989 | 3.010475e-53 | -8.615850e-47 |
| Msa0039250 | Msa0307570 | 0.834058 | 3.732713e-56 | -8.615850e-47 |
| Msa0047640 | Msa0307570 | 0.804454 | 2.143436e-49 | -8.615850e-47 |
| Msa0049780 | Msa0307570 | 0.808898 | 2.470392e-50 | -8.615850e-47 |
| Msa0052870 | Msa0307570 | 0.998324 | 7.250166e-262 | -8.615850e-47 |
| Msa0056450 | Msa0307570 | 0.804520 | 2.077091e-49 | -8.615850e-47 |
| Msa0069600 | Msa0307570 | 0.821447 | 4.018725e-53 | -8.615850e-47 |
| Msa0084970 | Msa0307570 | 0.833986 | 3.891400e-56 | -8.615850e-47 |
| Msa0089980 | Msa0307570 | 0.827014 | 1.976991e-54 | -8.615850e-47 |
| Msa0090010 | Msa0307570 | 0.823379 | 1.429943e-53 | -8.615850e-47 |
| Msa0093850 | Msa0307570 | 0.851303 | 9.687016e-61 | -8.615850e-47 |
| Msa0098470 | Msa0307570 | 0.855019 | 8.352498e-62 | -8.615850e-47 |
| Msa0105120 | Msa0307570 | 0.801026 | 1.093333e-48 | -8.615850e-47 |
| Msa0106320 | Msa0307570 | 0.833461 | 5.263759e-56 | -8.615850e-47 |
| Msa0106620 | Msa0307570 | 0.826802 | 2.221139e-54 | -8.615850e-47 |
| Msa0108390 | Msa0307570 | 0.834088 | 3.668658e-56 | -8.615850e-47 |
| Msa0116790 | Msa0307570 | 0.880033 | 7.657766e-70 | -8.615850e-47 |
| Msa0130110 | Msa0307570 | 0.846941 | 1.583008e-59 | -8.615850e-47 |
| Msa0133720 | Msa0307570 | 0.835004 | 2.159656e-56 | -8.615850e-47 |
| Msa0133820 | Msa0307570 | 0.850352 | 1.795232e-60 | -8.615850e-47 |
| Msa0134000 | Msa0307570 | 0.821545 | 3.814174e-53 | -8.615850e-47 |
| Msa0137540 | Msa0307570 | 0.818050 | 2.399368e-52 | -8.615850e-47 |
| Msa0138360 | Msa0307570 | 0.887906 | 9.452724e-73 | -8.615850e-47 |
| Msa0140240 | Msa0307570 | 0.818855 | 1.576558e-52 | -8.615850e-47 |
| Msa0141400 | Msa0307570 | 0.839975 | 1.148840e-57 | -8.615850e-47 |
| Msa0144360 | Msa0307570 | 0.845348 | 4.296839e-59 | -8.615850e-47 |
| Msa0146740 | Msa0307570 | 0.839349 | 1.671423e-57 | -8.615850e-47 |
| Msa0147980 | Msa0307570 | 0.862872 | 3.726112e-64 | -8.615850e-47 |
| Msa0152400 | Msa0307570 | 0.806910 | 6.538534e-50 | -8.615850e-47 |
| Msa0152870 | Msa0307570 | 0.807759 | 4.320486e-50 | -8.615850e-47 |
| Msa0171850 | Msa0307570 | 0.802899 | 4.507154e-49 | -8.615850e-47 |
| Msa0173890 | Msa0307570 | 0.801435 | 9.016566e-49 | -8.615850e-47 |
| Msa0175930 | Msa0307570 | 0.804023 | 2.635052e-49 | -8.615850e-47 |
| Msa0176050 | Msa0307570 | 0.822776 | 1.977130e-53 | -8.615850e-47 |
| Msa0176900 | Msa0307570 | 0.831843 | 1.326183e-55 | -8.615850e-47 |
| Msa0181000 | Msa0307570 | 0.820847 | 5.523834e-53 | -8.615850e-47 |
| Msa0181230 | Msa0307570 | 0.853025 | 3.138740e-61 | -8.615850e-47 |
| Msa0187030 | Msa0307570 | 0.848617 | 5.467889e-60 | -8.615850e-47 |
| Msa0191890 | Msa0307570 | 0.820904 | 5.360460e-53 | -8.615850e-47 |
| Msa0194860 | Msa0307570 | 0.807160 | 5.790421e-50 | -8.615850e-47 |
| Msa0194890 | Msa0307570 | 0.809156 | 2.175138e-50 | -8.615850e-47 |
| Msa0206840 | Msa0307570 | 0.819220 | 1.302336e-52 | -8.615850e-47 |
| Msa0221480 | Msa0307570 | 0.815721 | 7.994706e-52 | -8.615850e-47 |
| Msa0225480 | Msa0307570 | 0.831908 | 1.278484e-55 | -8.615850e-47 |
| Msa0230150 | Msa0307570 | 0.806126 | 9.568164e-50 | -8.615850e-47 |
| Msa0230370 | Msa0307570 | 0.849008 | 4.260072e-60 | -8.615850e-47 |
| Msa0241830 | Msa0307570 | 0.821810 | 3.313208e-53 | -8.615850e-47 |
| Msa0244380 | Msa0307570 | 0.806381 | 8.455961e-50 | -8.615850e-47 |
| Msa0249540 | Msa0307570 | 0.818515 | 1.882475e-52 | -8.615850e-47 |
| Msa0279850 | Msa0307570 | 0.833771 | 4.404817e-56 | -8.615850e-47 |
| Msa0289950 | Msa0307570 | 0.804197 | 2.424543e-49 | -8.615850e-47 |
| Msa0299880 | Msa0307570 | 0.811638 | 6.334942e-51 | -8.615850e-47 |
| Msa0300270 | Msa0307570 | 0.801024 | 1.094569e-48 | -8.615850e-47 |
| Msa0300320 | Msa0307570 | 0.816635 | 4.995910e-52 | -8.615850e-47 |
| Msa0307570 | Msa0312530 | 0.836436 | 9.369439e-57 | -8.615850e-47 |
| Msa0307570 | Msa0322900 | 0.858826 | 6.308591e-63 | -8.615850e-47 |
| Msa0307570 | Msa0341690 | 0.837569 | 4.810839e-57 | -8.615850e-47 |
| Msa0307570 | Msa0342010 | 0.817278 | 3.582747e-52 | -8.615850e-47 |
| Msa0307570 | Msa0346990 | 0.817685 | 2.900779e-52 | -8.615850e-47 |
| Msa0307570 | Msa0358400 | 0.804652 | 1.949249e-49 | -8.615850e-47 |
| Msa0307570 | Msa0363400 | 0.817157 | 3.814255e-52 | -8.615850e-47 |
| Msa0307570 | Msa0363810 | 0.840222 | 9.904972e-58 | -8.615850e-47 |
| Msa0307570 | Msa0378720 | 0.802193 | 6.301200e-49 | -8.615850e-47 |
| Msa0307570 | Msa0385090 | 0.814029 | 1.897231e-51 | -8.615850e-47 |
| Msa0307570 | Msa0392200 | 0.820463 | 6.768485e-53 | -8.615850e-47 |
| Msa0307570 | Msa0403660 | 0.826631 | 2.440416e-54 | -8.615850e-47 |
| Msa0307570 | Msa0411410 | 0.843883 | 1.065482e-58 | -8.615850e-47 |
| Msa0307570 | Msa0434570 | 0.811788 | 5.875658e-51 | -8.615850e-47 |
| Msa0307570 | Msa0434770 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0307570 | Msa0435370 | 0.835096 | 2.047672e-56 | -8.615850e-47 |
| Msa0307570 | Msa0435420 | 0.830014 | 3.728175e-55 | -8.615850e-47 |
| Msa0307570 | Msa0435570 | 0.822577 | 2.199550e-53 | -8.615850e-47 |
| Msa0307570 | Msa0451070 | 0.816919 | 4.313570e-52 | -8.615850e-47 |
| Msa0307570 | Msa0468800 | 0.825871 | 3.700114e-54 | -8.615850e-47 |
| Msa0307570 | Msa0479200 | 0.839587 | 1.449602e-57 | -8.615850e-47 |
| Msa0307570 | Msa0485240 | 0.811309 | 7.465699e-51 | -8.615850e-47 |
| Msa0307570 | Msa0510290 | 0.805971 | 1.031841e-49 | -8.615850e-47 |
| Msa0307570 | Msa0518030 | 0.858499 | 7.901559e-63 | -8.615850e-47 |
| Msa0307570 | Msa0519760 | 0.811830 | 5.754527e-51 | -8.615850e-47 |
| Msa0307570 | Msa0519840 | 0.813680 | 2.264629e-51 | -8.615850e-47 |
| Msa0307570 | Msa0523900 | 0.801959 | 7.038661e-49 | -8.615850e-47 |
| Msa0307570 | Msa0527190 | 0.877794 | 4.722707e-69 | -8.615850e-47 |
| Msa0307570 | Msa0541850 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
| Msa0307570 | Msa0544660 | 0.803080 | 4.133878e-49 | -8.615850e-47 |
| Msa0307570 | Msa0549360 | 0.808958 | 2.397911e-50 | -8.615850e-47 |
| Msa0307570 | Msa0553200 | 0.812671 | 3.770468e-51 | -8.615850e-47 |
| Msa0307570 | Msa0556010 | 0.874107 | 8.742313e-68 | -8.615850e-47 |
| Msa0307570 | Msa0561410 | 0.860992 | 1.402196e-63 | -8.615850e-47 |
| Msa0307570 | Msa0572750 | 0.814639 | 1.390355e-51 | -8.615850e-47 |
| Msa0307570 | Msa0573380 | 0.840976 | 6.284716e-58 | -8.615850e-47 |
| Msa0307570 | Msa0576680 | 0.808342 | 3.246373e-50 | -8.615850e-47 |
| Msa0307570 | Msa0579660 | 0.820057 | 8.388064e-53 | -8.615850e-47 |
| Msa0307570 | Msa0581690 | 0.963019 | 1.418650e-121 | -8.615850e-47 |
| Msa0307570 | Msa0583500 | 0.826177 | 3.129542e-54 | -8.615850e-47 |
| Msa0307570 | Msa0584550 | 0.803131 | 4.035361e-49 | -8.615850e-47 |
| Msa0307570 | Msa0590640 | 0.838164 | 3.384313e-57 | -8.615850e-47 |
| Msa0307570 | Msa0597770 | 0.833828 | 4.261321e-56 | -8.615850e-47 |
| Msa0307570 | Msa0601950 | 0.815604 | 8.491826e-52 | -8.615850e-47 |
| Msa0307570 | Msa0615420 | 0.855157 | 7.613895e-62 | -8.615850e-47 |
| Msa0307570 | Msa0619420 | 0.811419 | 7.068618e-51 | -8.615850e-47 |
| Msa0307570 | Msa0624940 | 0.800769 | 1.233755e-48 | -8.615850e-47 |
| Msa0307570 | Msa0626270 | 0.862277 | 5.678767e-64 | -8.615850e-47 |
| Msa0307570 | Msa0626450 | 0.845413 | 4.124955e-59 | -8.615850e-47 |
| Msa0307570 | Msa0626460 | 0.837987 | 3.757009e-57 | -8.615850e-47 |
| Msa0307570 | Msa0626490 | 0.846529 | 2.051434e-59 | -8.615850e-47 |
| Msa0307570 | Msa0630940 | 0.845282 | 4.475800e-59 | -8.615850e-47 |
| Msa0307570 | Msa0640500 | 0.810122 | 1.348434e-50 | -8.615850e-47 |
| Msa0307570 | Msa0650830 | 0.802206 | 6.262228e-49 | -8.615850e-47 |
| Msa0307570 | Msa0659550 | 0.801744 | 7.792311e-49 | -8.615850e-47 |
| Msa0307570 | Msa0663270 | 0.804363 | 2.239170e-49 | -8.615850e-47 |
| Msa0307570 | Msa0664540 | 0.844058 | 9.563627e-59 | -8.615850e-47 |
| Msa0307570 | Msa0664600 | 0.852657 | 3.997028e-61 | -8.615850e-47 |
| Msa0307570 | Msa0669180 | 0.862286 | 5.643472e-64 | -8.615850e-47 |
| Msa0307570 | Msa0679100 | 0.807960 | 3.914976e-50 | -8.615850e-47 |
| Msa0307570 | Msa0689760 | 0.839832 | 1.251244e-57 | -8.615850e-47 |
| Msa0307570 | Msa0692880 | 0.884272 | 2.208864e-71 | -8.615850e-47 |
| Msa0307570 | Msa0698100 | 0.849547 | 3.015946e-60 | -8.615850e-47 |
| Msa0307570 | Msa0698290 | 0.800076 | 1.707373e-48 | -8.615850e-47 |
| Msa0307570 | Msa0698640 | 0.861188 | 1.222954e-63 | -8.615850e-47 |
| Msa0307570 | Msa0702590 | 0.808079 | 3.693905e-50 | -8.615850e-47 |
| Msa0307570 | Msa0703220 | 0.826182 | 3.120918e-54 | -8.615850e-47 |
| Msa0307570 | Msa0706760 | 0.858813 | 6.367420e-63 | -8.615850e-47 |
| Msa0307570 | Msa0716410 | 0.829011 | 6.533955e-55 | -8.615850e-47 |
| Msa0307570 | Msa0716860 | 0.847261 | 1.293632e-59 | -8.615850e-47 |
| Msa0307570 | Msa0721020 | 0.820396 | 7.011409e-53 | -8.615850e-47 |
| Msa0307570 | Msa0740720 | 0.806493 | 8.008030e-50 | -8.615850e-47 |
| Msa0307570 | Msa0744100 | 0.805822 | 1.108800e-49 | -8.615850e-47 |
| Msa0307570 | Msa0749400 | 0.812071 | 5.098682e-51 | -8.615850e-47 |
| Msa0307570 | Msa0751260 | 0.847364 | 1.211689e-59 | -8.615850e-47 |
| Msa0307570 | Msa0756620 | 0.806662 | 7.377476e-50 | -8.615850e-47 |
| Msa0307570 | Msa0757800 | 0.835763 | 1.388485e-56 | -8.615850e-47 |
| Msa0307570 | Msa0795070 | 0.837709 | 4.429494e-57 | -8.615850e-47 |
| Msa0307570 | Msa0797920 | 0.803158 | 3.983465e-49 | -8.615850e-47 |
| Msa0307570 | Msa0799000 | 0.869577 | 2.790038e-66 | -8.615850e-47 |
| Msa0307570 | Msa0800700 | 0.805278 | 1.442101e-49 | -8.615850e-47 |
| Msa0307570 | Msa0804250 | 0.812246 | 4.668127e-51 | -8.615850e-47 |
| Msa0307570 | Msa0815630 | 0.803805 | 2.926107e-49 | -8.615850e-47 |
| Msa0307570 | Msa0826510 | 0.817394 | 3.373934e-52 | -8.615850e-47 |
| Msa0307570 | Msa0835970 | 0.806285 | 8.857994e-50 | -8.615850e-47 |
| Msa0307570 | Msa0837410 | 0.894518 | 2.287307e-75 | -8.615850e-47 |
| Msa0307570 | Msa0856050 | 0.802130 | 6.491825e-49 | -8.615850e-47 |
| Msa0307570 | Msa0860620 | 0.806224 | 9.127152e-50 | -8.615850e-47 |
| Msa0307570 | Msa0861450 | 0.812729 | 3.661989e-51 | -8.615850e-47 |
| Msa0307570 | Msa0861510 | 0.815903 | 7.283845e-52 | -8.615850e-47 |
| Msa0307570 | Msa0861530 | 0.817603 | 3.027730e-52 | -8.615850e-47 |
| Msa0307570 | Msa0861600 | 0.820969 | 5.177613e-53 | -8.615850e-47 |
| Msa0307570 | Msa0865620 | 0.823026 | 1.728382e-53 | -8.615850e-47 |
| Msa0307570 | Msa0870520 | 0.813311 | 2.729582e-51 | -8.615850e-47 |
| Msa0307570 | Msa0870540 | 0.805406 | 1.355333e-49 | -8.615850e-47 |
| Msa0307570 | Msa0871720 | 0.815921 | 7.214405e-52 | -8.615850e-47 |
| Msa0307570 | Msa0903710 | 0.802683 | 4.993781e-49 | -8.615850e-47 |
| Msa0307570 | Msa0910440 | 0.805882 | 1.077267e-49 | -8.615850e-47 |
| Msa0307570 | Msa0929950 | 0.831486 | 1.624521e-55 | -8.615850e-47 |
| Msa0307570 | Msa0936380 | 0.804959 | 1.681897e-49 | -8.615850e-47 |
| Msa0307570 | Msa0937020 | 0.825149 | 5.485966e-54 | -8.615850e-47 |
| Msa0307570 | Msa0960420 | 0.802466 | 5.536875e-49 | -8.615850e-47 |
| Msa0307570 | Msa0962070 | 0.807380 | 5.199682e-50 | -8.615850e-47 |
| Msa0307570 | Msa0973140 | 0.810388 | 1.181609e-50 | -8.615850e-47 |
| Msa0307570 | Msa0974290 | 0.806499 | 7.984883e-50 | -8.615850e-47 |
| Msa0307570 | Msa0984690 | 0.811544 | 6.640515e-51 | -8.615850e-47 |
| Msa0307570 | Msa0984710 | 0.814750 | 1.314418e-51 | -8.615850e-47 |
| Msa0307570 | Msa0993740 | 0.816063 | 6.708975e-52 | -8.615850e-47 |
| Msa0307570 | Msa1010070 | 0.811696 | 6.154179e-51 | -8.615850e-47 |
| Msa0307570 | Msa1022820 | 0.807709 | 4.427668e-50 | -8.615850e-47 |
| Msa0307570 | Msa1027990 | 0.831361 | 1.743466e-55 | -8.615850e-47 |
| Msa0307570 | Msa1028280 | 0.833417 | 5.398719e-56 | -8.615850e-47 |
| Msa0307570 | Msa1028350 | 0.804944 | 1.693696e-49 | -8.615850e-47 |
| Msa0307570 | Msa1031390 | 0.846528 | 2.053058e-59 | -8.615850e-47 |
| Msa0307570 | Msa1034500 | 0.805892 | 1.071595e-49 | -8.615850e-47 |
| Msa0307570 | Msa1036280 | 0.815905 | 7.275818e-52 | -8.615850e-47 |
| Msa0307570 | Msa1038080 | 0.806552 | 7.781026e-50 | -8.615850e-47 |
| Msa0307570 | Msa1050910 | 0.811874 | 5.628751e-51 | -8.615850e-47 |
| Msa0307570 | Msa1050960 | 0.815433 | 9.268819e-52 | -8.615850e-47 |
| Msa0307570 | Msa1059960 | 0.817818 | 2.706748e-52 | -8.615850e-47 |
| Msa0307570 | Msa1061980 | 0.804104 | 2.535569e-49 | -8.615850e-47 |
| Msa0307570 | Msa1067140 | 0.805828 | 1.105427e-49 | -8.615850e-47 |
| Msa0307570 | Msa1072600 | 0.803328 | 3.673366e-49 | -8.615850e-47 |
| Msa0307570 | Msa1076560 | 0.836856 | 7.321177e-57 | -8.615850e-47 |
| Msa0307570 | Msa1085330 | 0.827360 | 1.633535e-54 | -8.615850e-47 |
| Msa0307570 | Msa1088410 | 0.801318 | 9.529208e-49 | -8.615850e-47 |
| Msa0307570 | Msa1095790 | 0.806796 | 6.913653e-50 | -8.615850e-47 |
| Msa0307570 | Msa1105160 | 0.806869 | 6.672183e-50 | -8.615850e-47 |
| Msa0307570 | Msa1127590 | 0.801547 | 8.551041e-49 | -8.615850e-47 |
| Msa0307570 | Msa1129690 | 0.805314 | 1.417175e-49 | -8.615850e-47 |
| Msa0307570 | Msa1145740 | 0.806647 | 7.431884e-50 | -8.615850e-47 |
| Msa0307570 | Msa1155900 | 0.806274 | 8.906836e-50 | -8.615850e-47 |
| Msa0307570 | Msa1160310 | 0.805598 | 1.235451e-49 | -8.615850e-47 |
| Msa0307570 | Msa1165090 | 0.807346 | 5.287074e-50 | -8.615850e-47 |
| Msa0307570 | Msa1169720 | 0.802415 | 5.671279e-49 | -8.615850e-47 |
| Msa0307570 | Msa1174530 | 0.817459 | 3.261278e-52 | -8.615850e-47 |
| Msa0307570 | Msa1198880 | 0.809296 | 2.029225e-50 | -8.615850e-47 |
| Msa0307570 | Msa1205790 | 0.864723 | 9.903121e-65 | -8.615850e-47 |
| Msa0307570 | Msa1205830 | 0.851612 | 7.923329e-61 | -8.615850e-47 |
| Msa0307570 | Msa1206230 | 0.819268 | 1.269636e-52 | -8.615850e-47 |
| Msa0307570 | Msa1211340 | 0.811156 | 8.061234e-51 | -8.615850e-47 |
| Msa0307570 | Msa1219900 | 0.800416 | 1.455898e-48 | -8.615850e-47 |
| Msa0307570 | Msa1223330 | 0.810573 | 1.077999e-50 | -8.615850e-47 |
| Msa0307570 | Msa1224840 | 0.805969 | 1.032470e-49 | -8.615850e-47 |
| Msa0307570 | Msa1234550 | 0.824516 | 7.737147e-54 | -8.615850e-47 |
| Msa0307570 | Msa1235250 | 0.812749 | 3.624985e-51 | -8.615850e-47 |
| Msa0307570 | Msa1252850 | -0.800370 | 1.488064e-48 | -8.615850e-47 |
| Msa0307570 | Msa1259640 | 0.812592 | 3.924206e-51 | -8.615850e-47 |
| Msa0307570 | Msa1267040 | 0.800171 | 1.633505e-48 | -8.615850e-47 |
| Msa0307570 | Msa1276660 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0307570 | Msa1277080 | 0.822195 | 2.697491e-53 | -8.615850e-47 |
| Msa0307570 | Msa1277490 | 0.802845 | 4.624205e-49 | -8.615850e-47 |
| Msa0307570 | Msa1282500 | 0.819113 | 1.377228e-52 | -8.615850e-47 |
| Msa0307570 | Msa1297970 | 0.805332 | 1.404745e-49 | -8.615850e-47 |
| Msa0307570 | Msa1302060 | 0.830419 | 2.967875e-55 | -8.615850e-47 |
| Msa0307570 | Msa1305280 | 0.818864 | 1.568769e-52 | -8.615850e-47 |
| Msa0307570 | Msa1326230 | 0.800246 | 1.577103e-48 | -8.615850e-47 |
| Msa0307570 | Msa1326240 | 0.805943 | 1.045768e-49 | -8.615850e-47 |
| Msa0307570 | Msa1329790 | 0.816241 | 6.119181e-52 | -8.615850e-47 |
| Msa0307570 | Msa1330450 | 0.810903 | 9.143823e-51 | -8.615850e-47 |
| Msa0307570 | Msa1331120 | 0.808681 | 2.748409e-50 | -8.615850e-47 |
| Msa0307570 | Msa1333560 | 0.808461 | 3.062611e-50 | -8.615850e-47 |
| Msa0307570 | Msa1333890 | 0.817647 | 2.959006e-52 | -8.615850e-47 |
| Msa0307570 | Msa1335160 | 0.825056 | 5.770091e-54 | -8.615850e-47 |
| Msa0307570 | Msa1338830 | 0.839662 | 1.385469e-57 | -8.615850e-47 |
| Msa0307570 | Msa1348090 | 0.823993 | 1.026613e-53 | -8.615850e-47 |
| Msa0307570 | Msa1354200 | 0.822548 | 2.233926e-53 | -8.615850e-47 |
| Msa0307570 | Msa1364430 | 0.811100 | 8.287338e-51 | -8.615850e-47 |
| Msa0307570 | Msa1365760 | 0.850363 | 1.782772e-60 | -8.615850e-47 |
| Msa0307570 | Msa1369150 | 0.808887 | 2.482683e-50 | -8.615850e-47 |
| Msa0307570 | Msa1371520 | 0.897324 | 1.570192e-76 | -8.615850e-47 |
| Msa0307570 | Msa1371910 | 0.801457 | 8.924848e-49 | -8.615850e-47 |
| Msa0307570 | Msa1373170 | 0.810827 | 9.497422e-51 | -8.615850e-47 |
| Msa0307570 | Msa1373820 | 0.844966 | 5.448741e-59 | -8.615850e-47 |
| Msa0307570 | Msa1393820 | 0.841174 | 5.576978e-58 | -8.615850e-47 |
| Msa0307570 | Msa1401270 | 0.816849 | 4.474237e-52 | -8.615850e-47 |
| Msa0307570 | Msa1409950 | 0.810328 | 1.217461e-50 | -8.615850e-47 |
| Msa0307570 | Msa1411500 | 0.806245 | 9.032868e-50 | -8.615850e-47 |
| Msa0307570 | Msa1411950 | 0.800489 | 1.406853e-48 | -8.615850e-47 |
| Msa0307570 | Msa1418240 | 0.821767 | 3.389661e-53 | -8.615850e-47 |
| Msa0307570 | Msa1420250 | 0.836204 | 1.073265e-56 | -8.615850e-47 |
| Msa0307570 | Msa1422910 | 0.823065 | 1.692523e-53 | -8.615850e-47 |
| Msa0307570 | Msa1427110 | 0.830167 | 3.419853e-55 | -8.615850e-47 |
| Msa0307570 | Msa1432920 | 0.843183 | 1.638423e-58 | -8.615850e-47 |
| Msa0307570 | Msa1439610 | 0.804311 | 2.296019e-49 | -8.615850e-47 |
| Msa0307570 | Msa1440960 | 0.850298 | 1.858298e-60 | -8.615850e-47 |
| Msa0307570 | Msa1443930 | 0.814806 | 1.277316e-51 | -8.615850e-47 |
| Msa0307570 | Msa1446780 | 0.815047 | 1.128925e-51 | -8.615850e-47 |
| Msa0307570 | Msa1449860 | 0.822913 | 1.836843e-53 | -8.615850e-47 |
| Msa0307570 | Msa1453360 | 0.823224 | 1.554189e-53 | -8.615850e-47 |
| Msa0307570 | Msa1459460 | 0.885075 | 1.111643e-71 | -8.615850e-47 |
| Msa0307570 | Msa1459910 | 0.825944 | 3.555229e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307570 | MtrunA17_Chr1g0152041 | 99.603 | 252 | 1 | 0 | 1 | 252 | 1 | 252 | 0.0 | 519 |
| Msa0307570 | MtrunA17_Chr2g0280271 | 61.154 | 260 | 90 | 1 | 2 | 250 | 1 | 260 | 1.61e-120 | 344 |
| Msa0307570 | MtrunA17_Chr4g0054361 | 60.000 | 260 | 94 | 2 | 2 | 252 | 1 | 259 | 2.95e-112 | 323 |
| Msa0307570 | MtrunA17_Chr3g0140311 | 91.667 | 48 | 1 | 1 | 205 | 252 | 1 | 45 | 8.73e-26 | 95.5 |
| Msa0307570 | MtrunA17_Chr3g0140301 | 67.089 | 79 | 17 | 3 | 125 | 203 | 10 | 79 | 1.38e-23 | 91.7 |
| Msa0307570 | MtrunA17_Chr3g0140291 | 81.633 | 49 | 6 | 1 | 59 | 104 | 2 | 50 | 5.75e-22 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0307570 | AT3G49720.2 | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.85e-124 | 354 |
| Msa0307570 | AT3G49720.1 | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.85e-124 | 354 |
| Msa0307570 | AT3G49720.3 | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.85e-124 | 354 |
| Msa0307570 | AT5G65810.1 | 62.977 | 262 | 82 | 3 | 2 | 252 | 1 | 258 | 4.08e-120 | 343 |
Find 79 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAAGAGAGAAAGATTT+TGG | 0.176751 | 2_4:-542995 | None:intergenic |
| GTAGCAGACGTTTCTAAATT+TGG | 0.181431 | 2_4:+543745 | Msa0307570:CDS |
| AAGTGGAATATCTGGCATTT+TGG | 0.205441 | 2_4:-544047 | None:intergenic |
| GAAAGTTAGATCTGAATTAA+AGG | 0.233717 | 2_4:-540046 | None:intergenic |
| ACTACATTATAAGTTGAATT+AGG | 0.247076 | 2_4:+544302 | Msa0307570:three_prime_UTR |
| CAATAAAACTCTTCCTGATT+TGG | 0.285100 | 2_4:+543057 | Msa0307570:CDS |
| GATGGTTTAGTGATATTTAC+TGG | 0.296086 | 2_4:+543094 | Msa0307570:CDS |
| TTTCCTTCAAAGTAACTTAG+AGG | 0.301335 | 2_4:+543968 | Msa0307570:CDS |
| TTGAAGTCACTCCATTGATT+TGG | 0.306737 | 2_4:+544068 | Msa0307570:exon |
| TGACAAAACTGGAGACGATT+TGG | 0.315458 | 2_4:-540321 | None:intergenic |
| TTCTCATTGGTTACTTGTAC+AGG | 0.330384 | 2_4:+540480 | Msa0307570:CDS |
| GGTCTCCTCGACATCATTAC+TGG | 0.330750 | 2_4:-540263 | None:intergenic |
| TCCATTGCTGTTGTTATATG+AGG | 0.352499 | 2_4:+544423 | Msa0307570:three_prime_UTR |
| AACTGGAGACGATTTGGATT+TGG | 0.354965 | 2_4:-540315 | None:intergenic |
| CAAAAGTGATACACCATCTA+TGG | 0.357242 | 2_4:-544204 | None:intergenic |
| AAATTCTGACCACAATTATA+AGG | 0.359359 | 2_4:-540349 | None:intergenic |
| CCATATGCTTTCTGTAAAAC+AGG | 0.362663 | 2_4:-542779 | None:intergenic |
| ACCTTGGCCTTCTGATTAGT+TGG | 0.376653 | 2_4:-543724 | None:intergenic |
| TCAAGTTTCCTCTTCCATAT+AGG | 0.389012 | 2_4:+542972 | Msa0307570:CDS |
| TGTCCTTTGCCGCTAAGAAT+TGG | 0.392976 | 2_4:-544262 | None:intergenic |
| GTGACTTCAAGTGGAATATC+TGG | 0.393548 | 2_4:-544055 | None:intergenic |
| GCTGATACCCTCACCAAATC+AGG | 0.395423 | 2_4:-543070 | None:intergenic |
| AATCATCAGTTGGGCATTGT+TGG | 0.396221 | 2_4:+539869 | None:intergenic |
| TCTCCTCTAAGTTACTTTGA+AGG | 0.396518 | 2_4:-543971 | None:intergenic |
| ATAAGGCCAATTGACAAAAC+TGG | 0.397117 | 2_4:-540332 | None:intergenic |
| TTTAGAAACGTCTGCTACCT+TGG | 0.402863 | 2_4:-543740 | None:intergenic |
| TGATAAATATTCGCCATAGA+TGG | 0.407752 | 2_4:+544191 | Msa0307570:three_prime_UTR |
| TGGTTCTATACCCCAGGCTT+CGG | 0.413733 | 2_4:-542879 | None:intergenic |
| GCCGTTTAGATTCTGTTAGC+AGG | 0.417799 | 2_4:+540735 | Msa0307570:CDS |
| AATAACACTCTTCTCTTCAC+TGG | 0.420317 | 2_4:+540096 | Msa0307570:five_prime_UTR |
| GGTTACTTGTACAGGGGCTC+AGG | 0.420689 | 2_4:+540488 | Msa0307570:CDS |
| TGTAATTGTTTCAGATACTC+TGG | 0.424438 | 2_4:+543012 | Msa0307570:CDS |
| TAGGGAGGCTTGTTTCTCAT+TGG | 0.425163 | 2_4:+540467 | Msa0307570:intron |
| CGGCAAAGGACATAACGATT+TGG | 0.430678 | 2_4:+544273 | Msa0307570:three_prime_UTR |
| CTCATTGGTTACTTGTACAG+GGG | 0.431130 | 2_4:+540482 | Msa0307570:CDS |
| AATCTTCTAGAAGAAGTTCC+AGG | 0.440271 | 2_4:-540284 | None:intergenic |
| AGGAAGATGAAACCGAAGCC+TGG | 0.442655 | 2_4:+542867 | Msa0307570:CDS |
| TCTGAATTAAAGGAGAGAAT+AGG | 0.443149 | 2_4:-540036 | None:intergenic |
| CCCTGCTAACAGAATCTAAA+CGG | 0.453868 | 2_4:-540736 | None:intergenic |
| GGAACTTCTTCTAGAAGATT+CGG | 0.454951 | 2_4:+540287 | Msa0307570:CDS |
| GTCAATTGGCCTTATAATTG+TGG | 0.457375 | 2_4:+540340 | Msa0307570:CDS |
| TCAGCATCCTCTATATCATA+TGG | 0.464095 | 2_4:-542899 | None:intergenic |
| GATTCTGTTAGCAGGGTTGA+AGG | 0.466384 | 2_4:+540743 | Msa0307570:CDS |
| TCTCATTGGTTACTTGTACA+GGG | 0.473655 | 2_4:+540481 | Msa0307570:CDS |
| ATTTATCAACTCCAAATCAA+TGG | 0.474158 | 2_4:-544079 | None:intergenic |
| CTACACGCACATTGCCTCTA+CGG | 0.486209 | 2_4:-542943 | None:intergenic |
| GAGACCACATAACAAGTGTC+TGG | 0.486625 | 2_4:-542833 | None:intergenic |
| TTTGAAATACCAATTCTTAG+CGG | 0.492677 | 2_4:+544253 | Msa0307570:three_prime_UTR |
| GGAAGATGAAACCGAAGCCT+GGG | 0.497641 | 2_4:+542868 | Msa0307570:CDS |
| CTAAGATGAGGAGTGGATCC+TGG | 0.502597 | 2_4:+543934 | Msa0307570:CDS |
| TGTGGTCTCTAAATTGCAAA+AGG | 0.503512 | 2_4:+542847 | Msa0307570:CDS |
| TAGGTGATCTATAATTTAAG+TGG | 0.506752 | 2_4:+544321 | Msa0307570:three_prime_UTR |
| TATAGAACCATATGATATAG+AGG | 0.516192 | 2_4:+542892 | Msa0307570:CDS |
| ATCTATAATTTAAGTGGCAG+TGG | 0.516568 | 2_4:+544327 | Msa0307570:three_prime_UTR |
| ATCAATGGAGTGACTTCAAG+TGG | 0.523164 | 2_4:-544064 | None:intergenic |
| GTAATGATGTCGAGGAGACC+TGG | 0.528090 | 2_4:+540266 | Msa0307570:exon |
| ATCATATGGTTCTATACCCC+AGG | 0.528710 | 2_4:-542885 | None:intergenic |
| TTGTATATAGGTGGACTTGG+AGG | 0.538889 | 2_4:+540713 | Msa0307570:intron |
| TTCATTCAGCGACTGTCGGT+TGG | 0.539699 | 2_4:-539899 | None:intergenic |
| AACTCTTCCTGATTTGGTGA+GGG | 0.539875 | 2_4:+543063 | Msa0307570:CDS |
| CCGTTTAGATTCTGTTAGCA+GGG | 0.545887 | 2_4:+540736 | Msa0307570:CDS |
| TTGCTTCATTCAGCGACTGT+CGG | 0.550762 | 2_4:-539903 | None:intergenic |
| TTGGTGAGGGTATCAGCTGA+TGG | 0.552785 | 2_4:+543076 | Msa0307570:CDS |
| AAACTCTTCCTGATTTGGTG+AGG | 0.567840 | 2_4:+543062 | Msa0307570:CDS |
| CGTTTCTAAATTTGGAAGAG+CGG | 0.568253 | 2_4:+543753 | Msa0307570:CDS |
| TGATTATTTGTGCAGTGGTG+AGG | 0.575702 | 2_4:+542742 | Msa0307570:CDS |
| TCCAACTAATCAGAAGGCCA+AGG | 0.581897 | 2_4:+543723 | Msa0307570:CDS |
| TCCTCATATAACAACAGCAA+TGG | 0.582523 | 2_4:-544424 | None:intergenic |
| CTTCAGGCTAAGATGAGGAG+TGG | 0.587352 | 2_4:+543927 | Msa0307570:intron |
| TGGTCCAGACACTTGTTATG+TGG | 0.588659 | 2_4:+542829 | Msa0307570:CDS |
| ATACCAATTCTTAGCGGCAA+AGG | 0.591720 | 2_4:+544259 | Msa0307570:three_prime_UTR |
| GTAAAACAGGAATTGCTCGT+TGG | 0.599584 | 2_4:-542766 | None:intergenic |
| TGAATCCAGTAATGATGTCG+AGG | 0.637330 | 2_4:+540258 | Msa0307570:exon |
| GATGAGGAGTGGATCCTGGT+GGG | 0.642314 | 2_4:+543938 | Msa0307570:CDS |
| GCAGGTGATTATTTGTGCAG+TGG | 0.650350 | 2_4:+542737 | Msa0307570:intron |
| TGATAAATTGAGTAGCATTG+CGG | 0.665382 | 2_4:+544094 | Msa0307570:three_prime_UTR |
| AGATGAGGAGTGGATCCTGG+TGG | 0.665807 | 2_4:+543937 | Msa0307570:CDS |
| TGCAAAGCACAAATCCGTAG+AGG | 0.674784 | 2_4:+542929 | Msa0307570:CDS |
| GAAGATGAAACCGAAGCCTG+GGG | 0.688039 | 2_4:+542869 | Msa0307570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTCAAATAACTAT+CGG | + | chr2_4:540613-540632 | Msa0307570:intron | 10.0% |
| !!! | ATTTTCAATTATTTCTATTT+TGG | + | chr2_4:540816-540835 | Msa0307570:intron | 10.0% |
| !!! | TATAATATATTGTTTTTGAT+TGG | + | chr2_4:540925-540944 | Msa0307570:intron | 10.0% |
| !! | TAGAAATAATTGAAAATTGA+AGG | - | chr2_4:540813-540832 | None:intergenic | 15.0% |
| !!! | TATTTTGGTTGTTTTTTATT+TGG | + | chr2_4:540831-540850 | Msa0307570:intron | 15.0% |
| !!! | ATAATTATGCCATTTTTTAT+TGG | + | chr2_4:540860-540879 | Msa0307570:intron | 15.0% |
| !!! | TTAAATAAAAGTACCTATTA+AGG | + | chr2_4:541410-541429 | Msa0307570:intron | 15.0% |
| !!! | TTTATTACTTTTTTTAAACG+TGG | + | chr2_4:541612-541631 | Msa0307570:intron | 15.0% |
| !!! | TTATTACTTTTTTTAAACGT+GGG | + | chr2_4:541613-541632 | Msa0307570:intron | 15.0% |
| !!! | TTTATTTTGGATCAATAATT+GGG | - | chr2_4:542205-542224 | None:intergenic | 15.0% |
| !! | ATGTTAATAAAAATGGATAA+GGG | + | chr2_4:542452-542471 | Msa0307570:intron | 15.0% |
| !! | CTGTATTATTACAAAATATA+TGG | - | chr2_4:542704-542723 | None:intergenic | 15.0% |
| !!! | AAACATAGTTTTAACATAAA+TGG | - | chr2_4:543266-543285 | None:intergenic | 15.0% |
| !!! | AAGTATGATTAGATATTTTT+TGG | + | chr2_4:543423-543442 | Msa0307570:intron | 15.0% |
| !!! | AGTATGATTAGATATTTTTT+GGG | + | chr2_4:543424-543443 | Msa0307570:intron | 15.0% |
| !!! | TAATTTTGTTTTTGCAATGT+AGG | + | chr2_4:540448-540467 | Msa0307570:intron | 20.0% |
| !!! | AATTTTGTTTTTGCAATGTA+GGG | + | chr2_4:540449-540468 | Msa0307570:intron | 20.0% |
| !! | TCAAATTGGAAATTCATAAT+GGG | - | chr2_4:540980-540999 | None:intergenic | 20.0% |
| !! | TTCAAATTGGAAATTCATAA+TGG | - | chr2_4:540981-541000 | None:intergenic | 20.0% |
| !!! | ATTGTACTTGGTAAATTTTA+TGG | + | chr2_4:542167-542186 | Msa0307570:intron | 20.0% |
| !!! | CTTTATTTTGGATCAATAAT+TGG | - | chr2_4:542206-542225 | None:intergenic | 20.0% |
| !!! | CTTTGAGATGTTAATAAAAA+TGG | + | chr2_4:542445-542464 | Msa0307570:intron | 20.0% |
| !! | GATGTTAATAAAAATGGATA+AGG | + | chr2_4:542451-542470 | Msa0307570:intron | 20.0% |
| !! | AAAATAAAGTTTACTCAGAT+GGG | - | chr2_4:543146-543165 | None:intergenic | 20.0% |
| !! | AAAAATAAAGTTTACTCAGA+TGG | - | chr2_4:543147-543166 | None:intergenic | 20.0% |
| !! | AACTTGCATTAAGTTTATTA+CGG | + | chr2_4:543194-543213 | Msa0307570:intron | 20.0% |
| !!! | ACTACATTATAAGTTGAATT+AGG | + | chr2_4:544302-544321 | Msa0307570:three_prime_UTR | 20.0% |
| ! | GAAAGTTAGATCTGAATTAA+AGG | - | chr2_4:540049-540068 | None:intergenic | 25.0% |
| ! | AAATTCTGACCACAATTATA+AGG | - | chr2_4:540352-540371 | None:intergenic | 25.0% |
| !! | TTAAGCTGTGTTTTGTATAT+AGG | + | chr2_4:540701-540720 | Msa0307570:intron | 25.0% |
| ! | AAGTTACAGCCAATAAAAAA+TGG | - | chr2_4:540872-540891 | None:intergenic | 25.0% |
| ! | CAAATTGGAAATTCATAATG+GGG | - | chr2_4:540979-540998 | None:intergenic | 25.0% |
| ! | AATTGGAACAGATTTCAAAT+TGG | - | chr2_4:540994-541013 | None:intergenic | 25.0% |
| !! | TATTACTCCTTTTTACAAGT+GGG | + | chr2_4:541532-541551 | Msa0307570:intron | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr2_4:541559-541578 | None:intergenic | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr2_4:541559-541578 | None:intergenic | 25.0% |
| ! | TTAATTATGCTATGGATTCT+AGG | - | chr2_4:541865-541884 | None:intergenic | 25.0% |
| !! | TTAGTGAAGAATTCTTTTAC+TGG | - | chr2_4:542023-542042 | None:intergenic | 25.0% |
| ! | ATTCTTCACTAAAGAAAACT+TGG | + | chr2_4:542031-542050 | Msa0307570:intron | 25.0% |
| !! | CAAACCATGTTTTCAAATAA+CGG | + | chr2_4:542067-542086 | Msa0307570:intron | 25.0% |
| ! | TCTGTGATGTCTATATATTT+AGG | + | chr2_4:542138-542157 | Msa0307570:intron | 25.0% |
| !! | TTTAGGTTCATTATTGTACT+TGG | + | chr2_4:542155-542174 | Msa0307570:intron | 25.0% |
| !!! | CTAGATCTTAGTCTTTATTT+TGG | - | chr2_4:542218-542237 | None:intergenic | 25.0% |
| ! | AAAGACTAAGATCTAGAAAA+TGG | + | chr2_4:542222-542241 | Msa0307570:intron | 25.0% |
| ! | AAGACTAAGATCTAGAAAAT+GGG | + | chr2_4:542223-542242 | Msa0307570:intron | 25.0% |
| ! | AAATCGTTAAATATTGCGTA+TGG | + | chr2_4:542288-542307 | Msa0307570:intron | 25.0% |
| ! | TGGTTATCATAAATCAGAAA+CGG | + | chr2_4:542308-542327 | Msa0307570:intron | 25.0% |
| ! | TAATAAAAATGGATAAGGGT+AGG | + | chr2_4:542456-542475 | Msa0307570:intron | 25.0% |
| ! | AATAAAAATGGATAAGGGTA+GGG | + | chr2_4:542457-542476 | Msa0307570:intron | 25.0% |
| !! | TTTGGTAGTATTATCAAATG+AGG | - | chr2_4:542509-542528 | None:intergenic | 25.0% |
| ! | TATAGAACCATATGATATAG+AGG | + | chr2_4:542892-542911 | Msa0307570:CDS | 25.0% |
| !! | ATTACAAGAGAGAAAGATTT+TGG | - | chr2_4:542998-543017 | None:intergenic | 25.0% |
| ! | TTAATGCAAGTTTCATGTTA+AGG | - | chr2_4:543186-543205 | None:intergenic | 25.0% |
| !!! | TAATTTTTTTCAGCTGAGTT+CGG | + | chr2_4:543326-543345 | Msa0307570:intron | 25.0% |
| !! | TTTTTATATACTGCTGATGT+TGG | + | chr2_4:543611-543630 | Msa0307570:intron | 25.0% |
| ! | ATAATCATCTCTTCAAATGA+AGG | + | chr2_4:543697-543716 | Msa0307570:intron | 25.0% |
| ! | ATTTATCAACTCCAAATCAA+TGG | - | chr2_4:544082-544101 | None:intergenic | 25.0% |
| !! | TTTGAAATACCAATTCTTAG+CGG | + | chr2_4:544253-544272 | Msa0307570:three_prime_UTR | 25.0% |
| ! | TAGGTGATCTATAATTTAAG+TGG | + | chr2_4:544321-544340 | Msa0307570:three_prime_UTR | 25.0% |
| TCTGAATTAAAGGAGAGAAT+AGG | - | chr2_4:540039-540058 | None:intergenic | 30.0% | |
| ! | TGAATTATGCATCGATAATG+AGG | - | chr2_4:540379-540398 | None:intergenic | 30.0% |
| TTGAAGCAAGAAAGAATAAG+AGG | - | chr2_4:540527-540546 | None:intergenic | 30.0% | |
| ! | AGTGATTCATAGTTCTTTTG+TGG | + | chr2_4:540651-540670 | Msa0307570:intron | 30.0% |
| AAGTATTATACAACAACCCT+AGG | + | chr2_4:541191-541210 | Msa0307570:intron | 30.0% | |
| TCACAAATTGTAAGTGACAA+AGG | - | chr2_4:541245-541264 | None:intergenic | 30.0% | |
| CCTTATTAGTGTATTACCAT+TGG | - | chr2_4:541447-541466 | None:intergenic | 30.0% | |
| CCAATGGTAATACACTAATA+AGG | + | chr2_4:541444-541463 | Msa0307570:intron | 30.0% | |
| ! | CTATTACTCCTTTTTACAAG+TGG | + | chr2_4:541531-541550 | Msa0307570:intron | 30.0% |
| TTATTACTCCTTTATGCAAG+TGG | + | chr2_4:541572-541591 | Msa0307570:intron | 30.0% | |
| TATTACTCCTTTATGCAAGT+GGG | + | chr2_4:541573-541592 | Msa0307570:intron | 30.0% | |
| ! | AGTGATGCTTATTTCTTTCT+GGG | + | chr2_4:541818-541837 | Msa0307570:intron | 30.0% |
| GAGAAGTCTTAATTATGCTA+TGG | - | chr2_4:541873-541892 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTCTTGAAGCAAAC+AGG | - | chr2_4:541961-541980 | None:intergenic | 30.0% |
| GTTTGCTTCAAGAGAAAAAA+TGG | + | chr2_4:541961-541980 | Msa0307570:intron | 30.0% | |
| AAGAGAAAAAATGGAGTGAT+AGG | + | chr2_4:541970-541989 | Msa0307570:intron | 30.0% | |
| TAAAGAAAACTTGGCTAAGA+AGG | + | chr2_4:542040-542059 | Msa0307570:intron | 30.0% | |
| AACACCGTTATTTGAAAACA+TGG | - | chr2_4:542074-542093 | None:intergenic | 30.0% | |
| CGATTTCAAAGAATGTATGT+TGG | - | chr2_4:542274-542293 | None:intergenic | 30.0% | |
| TGAGAAATGAACATAATGAG+AGG | + | chr2_4:542357-542376 | Msa0307570:intron | 30.0% | |
| AATGAACATAATGAGAGGTT+TGG | + | chr2_4:542362-542381 | Msa0307570:intron | 30.0% | |
| TTGGTTTCTTTCTCTTTGTT+TGG | + | chr2_4:542381-542400 | Msa0307570:intron | 30.0% | |
| ! | TTTGGATGTTTAAAATCCAC+TGG | + | chr2_4:542399-542418 | Msa0307570:intron | 30.0% |
| TTACCAATAAGTCATTGTGT+TGG | - | chr2_4:542580-542599 | None:intergenic | 30.0% | |
| TGTTAATGACAGAGAACAAA+GGG | - | chr2_4:542610-542629 | None:intergenic | 30.0% | |
| ATGTTAATGACAGAGAACAA+AGG | - | chr2_4:542611-542630 | None:intergenic | 30.0% | |
| ! | ATGCATAAAGTTTTGCATGT+TGG | + | chr2_4:542809-542828 | Msa0307570:CDS | 30.0% |
| TGTAATTGTTTCAGATACTC+TGG | + | chr2_4:543012-543031 | Msa0307570:CDS | 30.0% | |
| !!! | AGAGTTTTATTGAGGTATCT+GGG | - | chr2_4:543049-543068 | None:intergenic | 30.0% |
| !!! | AAGAGTTTTATTGAGGTATC+TGG | - | chr2_4:543050-543069 | None:intergenic | 30.0% |
| !!! | AATCAGGAAGAGTTTTATTG+AGG | - | chr2_4:543057-543076 | None:intergenic | 30.0% |
| CAATAAAACTCTTCCTGATT+TGG | + | chr2_4:543057-543076 | Msa0307570:CDS | 30.0% | |
| GATGGTTTAGTGATATTTAC+TGG | + | chr2_4:543094-543113 | Msa0307570:CDS | 30.0% | |
| ! | CTGATTAGTTCAAACTTCAA+AGG | + | chr2_4:543373-543392 | Msa0307570:intron | 30.0% |
| ! | TATTTGAAGTAGTGTGTTTG+AGG | + | chr2_4:543581-543600 | Msa0307570:intron | 30.0% |
| TAATATCCTCTGCTTCAAAA+AGG | - | chr2_4:543846-543865 | None:intergenic | 30.0% | |
| TTTCCTTCAAAGTAACTTAG+AGG | + | chr2_4:543968-543987 | Msa0307570:CDS | 30.0% | |
| TGATAAATTGAGTAGCATTG+CGG | + | chr2_4:544094-544113 | Msa0307570:three_prime_UTR | 30.0% | |
| TGATAAATATTCGCCATAGA+TGG | + | chr2_4:544191-544210 | Msa0307570:three_prime_UTR | 30.0% | |
| ATCTATAATTTAAGTGGCAG+TGG | + | chr2_4:544327-544346 | Msa0307570:three_prime_UTR | 30.0% | |
| AATAACACTCTTCTCTTCAC+TGG | + | chr2_4:540096-540115 | Msa0307570:five_prime_UTR | 35.0% | |
| AGAGAGAAATAGATCTGGAA+TGG | - | chr2_4:540133-540152 | None:intergenic | 35.0% | |
| GTAAGAGAGAGAAATAGATC+TGG | - | chr2_4:540138-540157 | None:intergenic | 35.0% | |
| ATATGATACGAAAACGCGTA+TGG | - | chr2_4:540166-540185 | None:intergenic | 35.0% | |
| ! | AATCTTCTAGAAGAAGTTCC+AGG | - | chr2_4:540287-540306 | None:intergenic | 35.0% |
| ! | GGAACTTCTTCTAGAAGATT+CGG | + | chr2_4:540287-540306 | Msa0307570:CDS | 35.0% |
| ATAAGGCCAATTGACAAAAC+TGG | - | chr2_4:540335-540354 | None:intergenic | 35.0% | |
| !! | GTCAATTGGCCTTATAATTG+TGG | + | chr2_4:540340-540359 | Msa0307570:CDS | 35.0% |
| !!! | TTTGTTTTTGCAATGTAGGG+AGG | + | chr2_4:540452-540471 | Msa0307570:intron | 35.0% |
| ! | TTCTCATTGGTTACTTGTAC+AGG | + | chr2_4:540480-540499 | Msa0307570:CDS | 35.0% |
| ! | TCTCATTGGTTACTTGTACA+GGG | + | chr2_4:540481-540500 | Msa0307570:CDS | 35.0% |
| ! | AGCTGTGTTTTGTATATAGG+TGG | + | chr2_4:540704-540723 | Msa0307570:intron | 35.0% |
| !! | GTTTTGTATATAGGTGGACT+TGG | + | chr2_4:540710-540729 | Msa0307570:intron | 35.0% |
| ! | GCTGTAACTTGTGTCTTATT+TGG | + | chr2_4:540882-540901 | Msa0307570:intron | 35.0% |
| ! | CCAAACAATGCAAGACTTTT+TGG | - | chr2_4:541019-541038 | None:intergenic | 35.0% |
| CCAAAAAGTCTTGCATTGTT+TGG | + | chr2_4:541016-541035 | Msa0307570:intron | 35.0% | |
| GAAGTAAATGACATCTCAGT+GGG | - | chr2_4:541088-541107 | None:intergenic | 35.0% | |
| TGAAGTAAATGACATCTCAG+TGG | - | chr2_4:541089-541108 | None:intergenic | 35.0% | |
| CATTTAAGGAGTCCTTGTTA+GGG | - | chr2_4:541357-541376 | None:intergenic | 35.0% | |
| AAATAAGTGATGTGTCACGT+GGG | - | chr2_4:541383-541402 | None:intergenic | 35.0% | |
| TAAATAAGTGATGTGTCACG+TGG | - | chr2_4:541384-541403 | None:intergenic | 35.0% | |
| GAAAAAATGAGTCCCTGATA+AGG | - | chr2_4:541687-541706 | None:intergenic | 35.0% | |
| !!! | CTCATTTTTTCTTCCTCCAA+TGG | + | chr2_4:541696-541715 | Msa0307570:intron | 35.0% |
| !!! | ATTTTTTCTTCCTCCAATGG+AGG | + | chr2_4:541699-541718 | Msa0307570:intron | 35.0% |
| !!! | TTTTTTCTTCCTCCAATGGA+GGG | + | chr2_4:541700-541719 | Msa0307570:intron | 35.0% |
| !! | ATTCTAAGAGCATCTCCAAT+GGG | - | chr2_4:541762-541781 | None:intergenic | 35.0% |
| ! | CAGTGATGCTTATTTCTTTC+TGG | + | chr2_4:541817-541836 | Msa0307570:intron | 35.0% |
| TTGTTTGATACGAGAGAAAC+TGG | + | chr2_4:541916-541935 | Msa0307570:intron | 35.0% | |
| TGTTTGATACGAGAGAAACT+GGG | + | chr2_4:541917-541936 | Msa0307570:intron | 35.0% | |
| ! | TCACAGACACAAATTGGTTT+AGG | - | chr2_4:542125-542144 | None:intergenic | 35.0% |
| TAGACATCACAGACACAAAT+TGG | - | chr2_4:542131-542150 | None:intergenic | 35.0% | |
| ! | TGTTTAAAATCCACTGGAGT+TGG | + | chr2_4:542405-542424 | Msa0307570:intron | 35.0% |
| ! | GTTTAAAATCCACTGGAGTT+GGG | + | chr2_4:542406-542425 | Msa0307570:intron | 35.0% |
| ! | TTTAAAATCCACTGGAGTTG+GGG | + | chr2_4:542407-542426 | Msa0307570:intron | 35.0% |
| ACATAAAGACGCAACTAGTT+TGG | - | chr2_4:542527-542546 | None:intergenic | 35.0% | |
| TTGGATGAATGGAGAACAAA+GGG | - | chr2_4:542561-542580 | None:intergenic | 35.0% | |
| AAGTCATTGTGTTGGATGAA+TGG | - | chr2_4:542572-542591 | None:intergenic | 35.0% | |
| CATCCAACACAATGACTTAT+TGG | + | chr2_4:542574-542593 | Msa0307570:intron | 35.0% | |
| !! | TACAGATAACTTGTTGATGC+AGG | + | chr2_4:542719-542738 | Msa0307570:intron | 35.0% |
| CCATATGCTTTCTGTAAAAC+AGG | - | chr2_4:542782-542801 | None:intergenic | 35.0% | |
| !! | CCTGTTTTACAGAAAGCATA+TGG | + | chr2_4:542779-542798 | Msa0307570:CDS | 35.0% |
| TGTGGTCTCTAAATTGCAAA+AGG | + | chr2_4:542847-542866 | Msa0307570:CDS | 35.0% | |
| TCAGCATCCTCTATATCATA+TGG | - | chr2_4:542902-542921 | None:intergenic | 35.0% | |
| TCAAGTTTCCTCTTCCATAT+AGG | + | chr2_4:542972-542991 | Msa0307570:CDS | 35.0% | |
| !! | GAGAAAGATTTTGGCCTATA+TGG | - | chr2_4:542989-543008 | None:intergenic | 35.0% |
| !!! | AGTTTTATTGAGGTATCTGG+GGG | - | chr2_4:543047-543066 | None:intergenic | 35.0% |
| !!! | GAGTTTTATTGAGGTATCTG+GGG | - | chr2_4:543048-543067 | None:intergenic | 35.0% |
| TTACTGGTAAGTGCATTTCA+TGG | + | chr2_4:543110-543129 | Msa0307570:intron | 35.0% | |
| CTTCTGAATCAAAGTGATTC+TGG | - | chr2_4:543291-543310 | None:intergenic | 35.0% | |
| TAGTTCAAACTTCAAAGGCA+TGG | + | chr2_4:543378-543397 | Msa0307570:intron | 35.0% | |
| ! | AGGTTTTCCAACTAATCAGA+AGG | + | chr2_4:543717-543736 | Msa0307570:intron | 35.0% |
| GTAGCAGACGTTTCTAAATT+TGG | + | chr2_4:543745-543764 | Msa0307570:CDS | 35.0% | |
| CGTTTCTAAATTTGGAAGAG+CGG | + | chr2_4:543753-543772 | Msa0307570:CDS | 35.0% | |
| ! | AACTCATTCCTTTTTGCTTC+AGG | + | chr2_4:543911-543930 | Msa0307570:intron | 35.0% |
| ! | TCTCCTCTAAGTTACTTTGA+AGG | - | chr2_4:543974-543993 | None:intergenic | 35.0% |
| ! | AAGTGGAATATCTGGCATTT+TGG | - | chr2_4:544050-544069 | None:intergenic | 35.0% |
| ! | TTGAAGTCACTCCATTGATT+TGG | + | chr2_4:544068-544087 | Msa0307570:exon | 35.0% |
| CAAAAGTGATACACCATCTA+TGG | - | chr2_4:544207-544226 | None:intergenic | 35.0% | |
| TGAATCCAGTAATGATGTCG+AGG | + | chr2_4:540258-540277 | Msa0307570:exon | 40.0% | |
| ! | AACTGGAGACGATTTGGATT+TGG | - | chr2_4:540318-540337 | None:intergenic | 40.0% |
| TGACAAAACTGGAGACGATT+TGG | - | chr2_4:540324-540343 | None:intergenic | 40.0% | |
| !! | TCGTCTCCAGTTTTGTCAAT+TGG | + | chr2_4:540326-540345 | Msa0307570:CDS | 40.0% |
| ! | CTCATTGGTTACTTGTACAG+GGG | + | chr2_4:540482-540501 | Msa0307570:CDS | 40.0% |
| ! | TTGTATATAGGTGGACTTGG+AGG | + | chr2_4:540713-540732 | Msa0307570:intron | 40.0% |
| CCCTGCTAACAGAATCTAAA+CGG | - | chr2_4:540739-540758 | None:intergenic | 40.0% | |
| CCGTTTAGATTCTGTTAGCA+GGG | + | chr2_4:540736-540755 | Msa0307570:CDS | 40.0% | |
| !! | TGCAAGACTTTTTGGCGAAT+TGG | - | chr2_4:541011-541030 | None:intergenic | 40.0% |
| TTACTTCAGACAAAAACGCG+AGG | + | chr2_4:541101-541120 | Msa0307570:intron | 40.0% | |
| TACTTCAGACAAAAACGCGA+GGG | + | chr2_4:541102-541121 | Msa0307570:intron | 40.0% | |
| ACATACAGATACACGACCTA+GGG | - | chr2_4:541210-541229 | None:intergenic | 40.0% | |
| TGAGATTGCTGCATCAAATG+CGG | + | chr2_4:541295-541314 | Msa0307570:intron | 40.0% | |
| TTGTTAGGGAACTACCATTG+TGG | - | chr2_4:541343-541362 | None:intergenic | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr2_4:541342-541361 | Msa0307570:intron | 40.0% | |
| CCATTTAAGGAGTCCTTGTT+AGG | - | chr2_4:541358-541377 | None:intergenic | 40.0% | |
| CCTAACAAGGACTCCTTAAA+TGG | + | chr2_4:541355-541374 | Msa0307570:intron | 40.0% | |
| AATAAGTGATGTGTCACGTG+GGG | - | chr2_4:541382-541401 | None:intergenic | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | - | chr2_4:541426-541445 | None:intergenic | 40.0% | |
| TAAGGACTCAATGACTCCAA+TGG | + | chr2_4:541428-541447 | Msa0307570:intron | 40.0% | |
| ACTTGGTCCCACTTGTAAAA+AGG | - | chr2_4:541542-541561 | None:intergenic | 40.0% | |
| TATCTCTCCTGGGTAACTAA+CGG | - | chr2_4:541641-541660 | None:intergenic | 40.0% | |
| TTAGTTACCCAGGAGAGATA+GGG | + | chr2_4:541641-541660 | Msa0307570:intron | 40.0% | |
| AAGGAACGGGCAACTATATA+AGG | - | chr2_4:541668-541687 | None:intergenic | 40.0% | |
| AATGAGTCCCTGATAAGGAA+CGG | - | chr2_4:541682-541701 | None:intergenic | 40.0% | |
| !! | TTCTAAGAGCATCTCCAATG+GGG | - | chr2_4:541761-541780 | None:intergenic | 40.0% |
| !! | CATTCTAAGAGCATCTCCAA+TGG | - | chr2_4:541763-541782 | None:intergenic | 40.0% |
| AGTGATAGGAAACTTAGCAG+CGG | + | chr2_4:541984-542003 | Msa0307570:intron | 40.0% | |
| ! | AATTCTTTTACTGGCGAGTG+AGG | - | chr2_4:542014-542033 | None:intergenic | 40.0% |
| TTAAAATCCACTGGAGTTGG+GGG | + | chr2_4:542408-542427 | Msa0307570:intron | 40.0% | |
| AAATGGATAAGGGTAGGGAT+AGG | + | chr2_4:542462-542481 | Msa0307570:intron | 40.0% | |
| GTTGGATGAATGGAGAACAA+AGG | - | chr2_4:542562-542581 | None:intergenic | 40.0% | |
| ! | ATCTAGTAGCAGTTAGCTTG+CGG | + | chr2_4:542666-542685 | Msa0307570:intron | 40.0% |
| TGATTATTTGTGCAGTGGTG+AGG | + | chr2_4:542742-542761 | Msa0307570:CDS | 40.0% | |
| GTAAAACAGGAATTGCTCGT+TGG | - | chr2_4:542769-542788 | None:intergenic | 40.0% | |
| ! | ATCATATGGTTCTATACCCC+AGG | - | chr2_4:542888-542907 | None:intergenic | 40.0% |
| !! | GATTTTGGCCTATATGGAAG+AGG | - | chr2_4:542983-543002 | None:intergenic | 40.0% |
| !! | AAACTCTTCCTGATTTGGTG+AGG | + | chr2_4:543062-543081 | Msa0307570:CDS | 40.0% |
| !! | AACTCTTCCTGATTTGGTGA+GGG | + | chr2_4:543063-543082 | Msa0307570:CDS | 40.0% |
| TTACAACTTACAACCCCAAG+TGG | + | chr2_4:543217-543236 | Msa0307570:intron | 40.0% | |
| TACAACTTACAACCCCAAGT+GGG | + | chr2_4:543218-543237 | Msa0307570:intron | 40.0% | |
| ! | CTATAACCTTTTCCCACTTG+GGG | - | chr2_4:543233-543252 | None:intergenic | 40.0% |
| ! | CCTATAACCTTTTCCCACTT+GGG | - | chr2_4:543234-543253 | None:intergenic | 40.0% |
| ! | TCCTATAACCTTTTCCCACT+TGG | - | chr2_4:543235-543254 | None:intergenic | 40.0% |
| !! | CTTTGATTCAGAAGCACTAG+AGG | + | chr2_4:543297-543316 | Msa0307570:intron | 40.0% |
| TGGGAAAATTGCACCTGTTA+AGG | + | chr2_4:543443-543462 | Msa0307570:intron | 40.0% | |
| TTGCACCTGTTAAGGATCAA+AGG | + | chr2_4:543451-543470 | Msa0307570:intron | 40.0% | |
| AACCACCTTTGATCCTTAAC+AGG | - | chr2_4:543459-543478 | None:intergenic | 40.0% | |
| GATTATCAGATGTCAGTGAC+AGG | - | chr2_4:543683-543702 | None:intergenic | 40.0% | |
| TTTAGAAACGTCTGCTACCT+TGG | - | chr2_4:543743-543762 | None:intergenic | 40.0% | |
| AGGTTGAAGGTCTAAATCGA+GGG | - | chr2_4:543826-543845 | None:intergenic | 40.0% | |
| AAGGTTGAAGGTCTAAATCG+AGG | - | chr2_4:543827-543846 | None:intergenic | 40.0% | |
| CTCTGCTTCAAAAAGGTTGA+AGG | - | chr2_4:543839-543858 | None:intergenic | 40.0% | |
| !!! | CTTCAACCTTTTTGAAGCAG+AGG | + | chr2_4:543837-543856 | Msa0307570:intron | 40.0% |
| CATCTTAGCCTGAAGCAAAA+AGG | - | chr2_4:543922-543941 | None:intergenic | 40.0% | |
| ! | TTTTGCTTCAGGCTAAGATG+AGG | + | chr2_4:543922-543941 | Msa0307570:intron | 40.0% |
| GTGACTTCAAGTGGAATATC+TGG | - | chr2_4:544058-544077 | None:intergenic | 40.0% | |
| ATCAATGGAGTGACTTCAAG+TGG | - | chr2_4:544067-544086 | None:intergenic | 40.0% | |
| ATACCAATTCTTAGCGGCAA+AGG | + | chr2_4:544259-544278 | Msa0307570:three_prime_UTR | 40.0% | |
| TTGCTTCATTCAGCGACTGT+CGG | - | chr2_4:539906-539925 | None:intergenic | 45.0% | |
| ! | TAGGGAGGCTTGTTTCTCAT+TGG | + | chr2_4:540467-540486 | Msa0307570:intron | 45.0% |
| GCCGTTTAGATTCTGTTAGC+AGG | + | chr2_4:540735-540754 | Msa0307570:CDS | 45.0% | |
| GATTCTGTTAGCAGGGTTGA+AGG | + | chr2_4:540743-540762 | Msa0307570:CDS | 45.0% | |
| CTTGCATTGTTTGGCAATCG+AGG | + | chr2_4:541025-541044 | Msa0307570:intron | 45.0% | |
| ! | CTCAGTGGGTTTAAGAGTGT+AGG | - | chr2_4:541074-541093 | None:intergenic | 45.0% |
| GTCGAGATATTGTCCGCTTT+GGG | - | chr2_4:541140-541159 | None:intergenic | 45.0% | |
| TGTCGAGATATTGTCCGCTT+TGG | - | chr2_4:541141-541160 | None:intergenic | 45.0% | |
| CGGACAATATCTCGACAATG+CGG | + | chr2_4:541144-541163 | Msa0307570:intron | 45.0% | |
| ATCTCGACAATGCGGTGTAA+TGG | + | chr2_4:541152-541171 | Msa0307570:intron | 45.0% | |
| !! | CGGTGTAATGGACTTGAGAT+CGG | + | chr2_4:541164-541183 | Msa0307570:intron | 45.0% |
| CACATACAGATACACGACCT+AGG | - | chr2_4:541211-541230 | None:intergenic | 45.0% | |
| ! | GGTACTTAGAGCATCCACAA+TGG | + | chr2_4:541326-541345 | Msa0307570:intron | 45.0% |
| ACTTGGTCCCACTTGCATAA+AGG | - | chr2_4:541583-541602 | None:intergenic | 45.0% | |
| ATCTCTCCTGGGTAACTAAC+GGG | - | chr2_4:541640-541659 | None:intergenic | 45.0% | |
| GTTAGTTACCCAGGAGAGAT+AGG | + | chr2_4:541640-541659 | Msa0307570:intron | 45.0% | |
| ATAAGGACCCTATCTCTCCT+GGG | - | chr2_4:541651-541670 | None:intergenic | 45.0% | |
| TATAAGGACCCTATCTCTCC+TGG | - | chr2_4:541652-541671 | None:intergenic | 45.0% | |
| ATAGTTGCCCGTTCCTTATC+AGG | + | chr2_4:541671-541690 | Msa0307570:intron | 45.0% | |
| TAGTTGCCCGTTCCTTATCA+GGG | + | chr2_4:541672-541691 | Msa0307570:intron | 45.0% | |
| ATGAGTCCCTGATAAGGAAC+GGG | - | chr2_4:541681-541700 | None:intergenic | 45.0% | |
| GGAGTGGTCCTTGTTAAGTA+AGG | + | chr2_4:541733-541752 | Msa0307570:intron | 45.0% | |
| ATGGGGGTCCTTACTTAACA+AGG | - | chr2_4:541744-541763 | None:intergenic | 45.0% | |
| TGTTAAGTAAGGACCCCCAT+TGG | + | chr2_4:541744-541763 | Msa0307570:intron | 45.0% | |
| !! | TCTAAGAGCATCTCCAATGG+GGG | - | chr2_4:541760-541779 | None:intergenic | 45.0% |
| AGGCAGCACTAAGCATCAAA+TGG | - | chr2_4:541845-541864 | None:intergenic | 45.0% | |
| TTGATACGAGAGAAACTGGG+AGG | + | chr2_4:541920-541939 | Msa0307570:intron | 45.0% | |
| GAGAGAAACTGGGAGGAATT+TGG | + | chr2_4:541927-541946 | Msa0307570:intron | 45.0% | |
| TAAGGGTAGGGATAGGATGT+AGG | + | chr2_4:542469-542488 | Msa0307570:intron | 45.0% | |
| !! | AGTTAGCTTGCGGTTCAAGT+AGG | + | chr2_4:542676-542695 | Msa0307570:intron | 45.0% |
| GCAGGTGATTATTTGTGCAG+TGG | + | chr2_4:542737-542756 | Msa0307570:intron | 45.0% | |
| !! | TGGTCCAGACACTTGTTATG+TGG | + | chr2_4:542829-542848 | Msa0307570:CDS | 45.0% |
| GAGACCACATAACAAGTGTC+TGG | - | chr2_4:542836-542855 | None:intergenic | 45.0% | |
| TGCAAAGCACAAATCCGTAG+AGG | + | chr2_4:542929-542948 | Msa0307570:CDS | 45.0% | |
| ! | TATTGAGGTATCTGGGGGAA+AGG | - | chr2_4:543042-543061 | None:intergenic | 45.0% |
| TTACAACCCCAAGTGGGAAA+AGG | + | chr2_4:543224-543243 | Msa0307570:intron | 45.0% | |
| CCCAAGTGGGAAAAGGTTAT+AGG | + | chr2_4:543231-543250 | Msa0307570:intron | 45.0% | |
| CACCTGTTAAGGATCAAAGG+TGG | + | chr2_4:543454-543473 | Msa0307570:intron | 45.0% | |
| TCCAACTAATCAGAAGGCCA+AGG | + | chr2_4:543723-543742 | Msa0307570:CDS | 45.0% | |
| ! | ACCTTGGCCTTCTGATTAGT+TGG | - | chr2_4:543727-543746 | None:intergenic | 45.0% |
| AAATTTGGAAGAGCGGTGAG+TGG | + | chr2_4:543760-543779 | Msa0307570:intron | 45.0% | |
| AAGGAAAAACTTGACCCACC+AGG | - | chr2_4:543955-543974 | None:intergenic | 45.0% | |
| TGTCCTTTGCCGCTAAGAAT+TGG | - | chr2_4:544265-544284 | None:intergenic | 45.0% | |
| CGGCAAAGGACATAACGATT+TGG | + | chr2_4:544273-544292 | Msa0307570:three_prime_UTR | 45.0% | |
| TTCATTCAGCGACTGTCGGT+TGG | - | chr2_4:539902-539921 | None:intergenic | 50.0% | |
| GGTCTCCTCGACATCATTAC+TGG | - | chr2_4:540266-540285 | None:intergenic | 50.0% | |
| GTAATGATGTCGAGGAGACC+TGG | + | chr2_4:540266-540285 | Msa0307570:exon | 50.0% | |
| GCATCAAATGCGGTGCTTTG+TGG | + | chr2_4:541305-541324 | Msa0307570:intron | 50.0% | |
| TGTCACGTGGGGTCCATTTA+AGG | - | chr2_4:541371-541390 | None:intergenic | 50.0% | |
| CTCCAATGGAGGGTCCTTAA+CGG | + | chr2_4:541710-541729 | Msa0307570:intron | 50.0% | |
| TCCAATGGAGGGTCCTTAAC+GGG | + | chr2_4:541711-541730 | Msa0307570:intron | 50.0% | |
| AGGAAGATGAAACCGAAGCC+TGG | + | chr2_4:542867-542886 | Msa0307570:CDS | 50.0% | |
| GGAAGATGAAACCGAAGCCT+GGG | + | chr2_4:542868-542887 | Msa0307570:CDS | 50.0% | |
| GAAGATGAAACCGAAGCCTG+GGG | + | chr2_4:542869-542888 | Msa0307570:CDS | 50.0% | |
| ! | TGGTTCTATACCCCAGGCTT+CGG | - | chr2_4:542882-542901 | None:intergenic | 50.0% |
| CTACACGCACATTGCCTCTA+CGG | - | chr2_4:542946-542965 | None:intergenic | 50.0% | |
| GCTGATACCCTCACCAAATC+AGG | - | chr2_4:543073-543092 | None:intergenic | 50.0% | |
| !! | TTGGTGAGGGTATCAGCTGA+TGG | + | chr2_4:543076-543095 | Msa0307570:CDS | 50.0% |
| CTTCAGGCTAAGATGAGGAG+TGG | + | chr2_4:543927-543946 | Msa0307570:intron | 50.0% | |
| CTAAGATGAGGAGTGGATCC+TGG | + | chr2_4:543934-543953 | Msa0307570:CDS | 50.0% | |
| GGTTACTTGTACAGGGGCTC+AGG | + | chr2_4:540488-540507 | Msa0307570:CDS | 55.0% | |
| AAACGCGAGGGCTCACACAA+AGG | + | chr2_4:541114-541133 | Msa0307570:intron | 55.0% | |
| GCTCACACAAAGGCCCAAAG+CGG | + | chr2_4:541124-541143 | Msa0307570:intron | 55.0% | |
| CGTTAAGGACCCTCCATTGG+AGG | - | chr2_4:541712-541731 | None:intergenic | 55.0% | |
| CCAATGGAGGGTCCTTAACG+GGG | + | chr2_4:541712-541731 | Msa0307570:intron | 55.0% | |
| ACAAGGACCACTCCCCGTTA+AGG | - | chr2_4:541727-541746 | None:intergenic | 55.0% | |
| AAATCCACTGGAGTTGGGGG+TGG | + | chr2_4:542411-542430 | Msa0307570:intron | 55.0% | |
| AGATGAGGAGTGGATCCTGG+TGG | + | chr2_4:543937-543956 | Msa0307570:CDS | 55.0% | |
| GATGAGGAGTGGATCCTGGT+GGG | + | chr2_4:543938-543957 | Msa0307570:CDS | 55.0% | |
| GTGGGACCCGTTAGTTACCC+AGG | + | chr2_4:541631-541650 | Msa0307570:intron | 60.0% | |
| CCCCGTTAAGGACCCTCCAT+TGG | - | chr2_4:541715-541734 | None:intergenic | 60.0% | |
| CACTGGAGTTGGGGGTGGAA+GGG | + | chr2_4:542416-542435 | Msa0307570:intron | 60.0% | |
| GGAGGGTCCTTAACGGGGAG+TGG | + | chr2_4:541717-541736 | Msa0307570:intron | 65.0% | |
| CCTTCCACCCCCAACTCCAG+TGG | - | chr2_4:542418-542437 | None:intergenic | 65.0% | |
| CCACTGGAGTTGGGGGTGGA+AGG | + | chr2_4:542415-542434 | Msa0307570:intron | 65.0% | |
| TGGAGTTGGGGGTGGAAGGG+AGG | + | chr2_4:542419-542438 | Msa0307570:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 539883 | 544445 | 539883 | ID=Msa0307570;Name=Msa0307570 |
| chr2_4 | mRNA | 539883 | 544445 | 539883 | ID=Msa0307570-mRNA-1;Parent=Msa0307570;Name=Msa0307570-mRNA-1;_AED=0.05;_eAED=0.05;_QI=275|1|1|1|0.83|0.71|7|360|252 |
| chr2_4 | exon | 539883 | 540117 | 539883 | ID=Msa0307570-mRNA-1:exon:216;Parent=Msa0307570-mRNA-1 |
| chr2_4 | exon | 540229 | 540361 | 540229 | ID=Msa0307570-mRNA-1:exon:217;Parent=Msa0307570-mRNA-1 |
| chr2_4 | exon | 540470 | 540509 | 540470 | ID=Msa0307570-mRNA-1:exon:218;Parent=Msa0307570-mRNA-1 |
| chr2_4 | exon | 540723 | 540764 | 540723 | ID=Msa0307570-mRNA-1:exon:219;Parent=Msa0307570-mRNA-1 |
| chr2_4 | exon | 542741 | 543115 | 542741 | ID=Msa0307570-mRNA-1:exon:220;Parent=Msa0307570-mRNA-1 |
| chr2_4 | exon | 543719 | 543774 | 543719 | ID=Msa0307570-mRNA-1:exon:221;Parent=Msa0307570-mRNA-1 |
| chr2_4 | exon | 543933 | 544445 | 543933 | ID=Msa0307570-mRNA-1:exon:222;Parent=Msa0307570-mRNA-1 |
| chr2_4 | five_prime_UTR | 539883 | 540117 | 539883 | ID=Msa0307570-mRNA-1:five_prime_utr;Parent=Msa0307570-mRNA-1 |
| chr2_4 | five_prime_UTR | 540229 | 540268 | 540229 | ID=Msa0307570-mRNA-1:five_prime_utr;Parent=Msa0307570-mRNA-1 |
| chr2_4 | CDS | 540269 | 540361 | 540269 | ID=Msa0307570-mRNA-1:cds;Parent=Msa0307570-mRNA-1 |
| chr2_4 | CDS | 540470 | 540509 | 540470 | ID=Msa0307570-mRNA-1:cds;Parent=Msa0307570-mRNA-1 |
| chr2_4 | CDS | 540723 | 540764 | 540723 | ID=Msa0307570-mRNA-1:cds;Parent=Msa0307570-mRNA-1 |
| chr2_4 | CDS | 542741 | 543115 | 542741 | ID=Msa0307570-mRNA-1:cds;Parent=Msa0307570-mRNA-1 |
| chr2_4 | CDS | 543719 | 543774 | 543719 | ID=Msa0307570-mRNA-1:cds;Parent=Msa0307570-mRNA-1 |
| chr2_4 | CDS | 543933 | 544085 | 543933 | ID=Msa0307570-mRNA-1:cds;Parent=Msa0307570-mRNA-1 |
| chr2_4 | three_prime_UTR | 544086 | 544445 | 544086 | ID=Msa0307570-mRNA-1:three_prime_utr;Parent=Msa0307570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
