Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052870 | XP_013465941.1 | 99.603 | 252 | 1 | 0 | 1 | 252 | 1 | 252 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052870 | sp|Q9M2Y6|CGR2_ARATH | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.82e-123 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052870 | B7FIL1 | 99.603 | 252 | 1 | 0 | 1 | 252 | 1 | 252 | 0.0 | 519 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0052870 | 0.829524 | 4.905872e-55 | -8.615850e-47 |
| Msa0001680 | Msa0052870 | 0.805817 | 1.111233e-49 | -8.615850e-47 |
| Msa0002680 | Msa0052870 | 0.878890 | 1.947368e-69 | -8.615850e-47 |
| Msa0002710 | Msa0052870 | 0.853810 | 1.868008e-61 | -8.615850e-47 |
| Msa0011930 | Msa0052870 | 0.835756 | 1.393840e-56 | -8.615850e-47 |
| Msa0012940 | Msa0052870 | 0.856792 | 2.530874e-62 | -8.615850e-47 |
| Msa0014570 | Msa0052870 | 0.821402 | 4.116188e-53 | -8.615850e-47 |
| Msa0027320 | Msa0052870 | 0.808022 | 3.798661e-50 | -8.615850e-47 |
| Msa0031820 | Msa0052870 | 0.806874 | 6.655018e-50 | -8.615850e-47 |
| Msa0032020 | Msa0052870 | 0.829265 | 5.669637e-55 | -8.615850e-47 |
| Msa0032320 | Msa0052870 | 0.813181 | 2.915428e-51 | -8.615850e-47 |
| Msa0035120 | Msa0052870 | 0.864400 | 1.249194e-64 | -8.615850e-47 |
| Msa0036890 | Msa0052870 | 0.823295 | 1.495935e-53 | -8.615850e-47 |
| Msa0039250 | Msa0052870 | 0.838777 | 2.350090e-57 | -8.615850e-47 |
| Msa0047640 | Msa0052870 | 0.805985 | 1.024503e-49 | -8.615850e-47 |
| Msa0049780 | Msa0052870 | 0.810283 | 1.245192e-50 | -8.615850e-47 |
| Msa0052870 | Msa0056450 | 0.809384 | 1.943366e-50 | -8.615850e-47 |
| Msa0052870 | Msa0060760 | 0.803354 | 3.627973e-49 | -8.615850e-47 |
| Msa0052870 | Msa0061340 | 0.800439 | 1.440329e-48 | -8.615850e-47 |
| Msa0052870 | Msa0069600 | 0.820857 | 5.495515e-53 | -8.615850e-47 |
| Msa0052870 | Msa0084970 | 0.834116 | 3.610374e-56 | -8.615850e-47 |
| Msa0052870 | Msa0089980 | 0.831258 | 1.848198e-55 | -8.615850e-47 |
| Msa0052870 | Msa0090010 | 0.827634 | 1.404252e-54 | -8.615850e-47 |
| Msa0052870 | Msa0093850 | 0.854631 | 1.082620e-61 | -8.615850e-47 |
| Msa0052870 | Msa0098470 | 0.853220 | 2.759279e-61 | -8.615850e-47 |
| Msa0052870 | Msa0105120 | 0.805132 | 1.547144e-49 | -8.615850e-47 |
| Msa0052870 | Msa0106320 | 0.834205 | 3.428379e-56 | -8.615850e-47 |
| Msa0052870 | Msa0106620 | 0.835148 | 1.986142e-56 | -8.615850e-47 |
| Msa0052870 | Msa0108390 | 0.839324 | 1.696507e-57 | -8.615850e-47 |
| Msa0052870 | Msa0115090 | 0.804231 | 2.385336e-49 | -8.615850e-47 |
| Msa0052870 | Msa0116790 | 0.881327 | 2.632717e-70 | -8.615850e-47 |
| Msa0052870 | Msa0130110 | 0.848830 | 4.772292e-60 | -8.615850e-47 |
| Msa0052870 | Msa0130240 | 0.801296 | 9.627799e-49 | -8.615850e-47 |
| Msa0052870 | Msa0133720 | 0.839350 | 1.670283e-57 | -8.615850e-47 |
| Msa0052870 | Msa0133820 | 0.854609 | 1.098669e-61 | -8.615850e-47 |
| Msa0052870 | Msa0134000 | 0.827702 | 1.352416e-54 | -8.615850e-47 |
| Msa0052870 | Msa0137540 | 0.817547 | 3.117096e-52 | -8.615850e-47 |
| Msa0052870 | Msa0138360 | 0.892350 | 1.721266e-74 | -8.615850e-47 |
| Msa0052870 | Msa0140240 | 0.817145 | 3.838694e-52 | -8.615850e-47 |
| Msa0052870 | Msa0141400 | 0.841079 | 5.906303e-58 | -8.615850e-47 |
| Msa0052870 | Msa0144360 | 0.849085 | 4.055689e-60 | -8.615850e-47 |
| Msa0052870 | Msa0146740 | 0.838423 | 2.900961e-57 | -8.615850e-47 |
| Msa0052870 | Msa0147980 | 0.868031 | 8.833258e-66 | -8.615850e-47 |
| Msa0052870 | Msa0152400 | 0.812587 | 3.932419e-51 | -8.615850e-47 |
| Msa0052870 | Msa0152870 | 0.807546 | 4.793836e-50 | -8.615850e-47 |
| Msa0052870 | Msa0154440 | 0.803344 | 3.645450e-49 | -8.615850e-47 |
| Msa0052870 | Msa0171850 | 0.804659 | 1.942534e-49 | -8.615850e-47 |
| Msa0052870 | Msa0173890 | 0.804767 | 1.844489e-49 | -8.615850e-47 |
| Msa0052870 | Msa0174450 | 0.800663 | 1.296856e-48 | -8.615850e-47 |
| Msa0052870 | Msa0175930 | 0.807884 | 4.064167e-50 | -8.615850e-47 |
| Msa0052870 | Msa0176050 | 0.822987 | 1.765342e-53 | -8.615850e-47 |
| Msa0052870 | Msa0176900 | 0.829114 | 6.167877e-55 | -8.615850e-47 |
| Msa0052870 | Msa0181000 | 0.825684 | 4.097626e-54 | -8.615850e-47 |
| Msa0052870 | Msa0181230 | 0.854033 | 1.610932e-61 | -8.615850e-47 |
| Msa0052870 | Msa0187030 | 0.853595 | 2.153465e-61 | -8.615850e-47 |
| Msa0052870 | Msa0191890 | 0.826338 | 2.865489e-54 | -8.615850e-47 |
| Msa0052870 | Msa0194860 | 0.806773 | 6.989469e-50 | -8.615850e-47 |
| Msa0052870 | Msa0194890 | 0.810331 | 1.215558e-50 | -8.615850e-47 |
| Msa0052870 | Msa0206840 | 0.822855 | 1.894245e-53 | -8.615850e-47 |
| Msa0052870 | Msa0221000 | 0.806524 | 7.889218e-50 | -8.615850e-47 |
| Msa0052870 | Msa0221480 | 0.817897 | 2.597860e-52 | -8.615850e-47 |
| Msa0052870 | Msa0225480 | 0.834326 | 3.197168e-56 | -8.615850e-47 |
| Msa0052870 | Msa0230150 | 0.811321 | 7.422204e-51 | -8.615850e-47 |
| Msa0052870 | Msa0230370 | 0.851680 | 7.580010e-61 | -8.615850e-47 |
| Msa0052870 | Msa0241830 | 0.824650 | 7.193391e-54 | -8.615850e-47 |
| Msa0052870 | Msa0244380 | 0.804533 | 2.063692e-49 | -8.615850e-47 |
| Msa0052870 | Msa0249540 | 0.818267 | 2.142996e-52 | -8.615850e-47 |
| Msa0052870 | Msa0279850 | 0.838794 | 2.327631e-57 | -8.615850e-47 |
| Msa0052870 | Msa0289950 | 0.804417 | 2.181735e-49 | -8.615850e-47 |
| Msa0052870 | Msa0299880 | 0.812385 | 4.354324e-51 | -8.615850e-47 |
| Msa0052870 | Msa0300270 | 0.807469 | 4.979383e-50 | -8.615850e-47 |
| Msa0052870 | Msa0300320 | 0.824583 | 7.460943e-54 | -8.615850e-47 |
| Msa0052870 | Msa0307570 | 0.998324 | 7.250166e-262 | -8.615850e-47 |
| Msa0052870 | Msa0312530 | 0.843170 | 1.651506e-58 | -8.615850e-47 |
| Msa0052870 | Msa0322900 | 0.863447 | 2.473794e-64 | -8.615850e-47 |
| Msa0052870 | Msa0341690 | 0.842964 | 1.874116e-58 | -8.615850e-47 |
| Msa0052870 | Msa0342010 | 0.823677 | 1.217821e-53 | -8.615850e-47 |
| Msa0052870 | Msa0346990 | 0.821791 | 3.346925e-53 | -8.615850e-47 |
| Msa0052870 | Msa0358400 | 0.810661 | 1.031594e-50 | -8.615850e-47 |
| Msa0052870 | Msa0358890 | 0.800577 | 1.350235e-48 | -8.615850e-47 |
| Msa0052870 | Msa0363400 | 0.821629 | 3.647429e-53 | -8.615850e-47 |
| Msa0052870 | Msa0363810 | 0.840876 | 6.676409e-58 | -8.615850e-47 |
| Msa0052870 | Msa0378720 | 0.809860 | 1.535342e-50 | -8.615850e-47 |
| Msa0052870 | Msa0385090 | 0.814787 | 1.289520e-51 | -8.615850e-47 |
| Msa0052870 | Msa0392200 | 0.826278 | 2.962048e-54 | -8.615850e-47 |
| Msa0052870 | Msa0403660 | 0.831142 | 1.974147e-55 | -8.615850e-47 |
| Msa0052870 | Msa0411410 | 0.846671 | 1.876257e-59 | -8.615850e-47 |
| Msa0052870 | Msa0434570 | 0.815131 | 1.081468e-51 | -8.615850e-47 |
| Msa0052870 | Msa0434770 | 0.810888 | 9.211483e-51 | -8.615850e-47 |
| Msa0052870 | Msa0435370 | 0.834894 | 2.301337e-56 | -8.615850e-47 |
| Msa0052870 | Msa0435420 | 0.830597 | 2.685093e-55 | -8.615850e-47 |
| Msa0052870 | Msa0435570 | 0.822489 | 2.304735e-53 | -8.615850e-47 |
| Msa0052870 | Msa0447370 | 0.802513 | 5.413288e-49 | -8.615850e-47 |
| Msa0052870 | Msa0451070 | 0.819964 | 8.809100e-53 | -8.615850e-47 |
| Msa0052870 | Msa0468800 | 0.829818 | 4.160648e-55 | -8.615850e-47 |
| Msa0052870 | Msa0478580 | 0.801603 | 8.330715e-49 | -8.615850e-47 |
| Msa0052870 | Msa0479200 | 0.844829 | 5.932832e-59 | -8.615850e-47 |
| Msa0052870 | Msa0485240 | 0.815448 | 9.196122e-52 | -8.615850e-47 |
| Msa0052870 | Msa0487780 | 0.800923 | 1.147499e-48 | -8.615850e-47 |
| Msa0052870 | Msa0510290 | 0.809083 | 2.254658e-50 | -8.615850e-47 |
| Msa0052870 | Msa0513160 | 0.800121 | 1.672065e-48 | -8.615850e-47 |
| Msa0052870 | Msa0516120 | 0.802909 | 4.485867e-49 | -8.615850e-47 |
| Msa0052870 | Msa0518030 | 0.862012 | 6.847114e-64 | -8.615850e-47 |
| Msa0052870 | Msa0519760 | 0.812017 | 5.236946e-51 | -8.615850e-47 |
| Msa0052870 | Msa0519840 | 0.813630 | 2.322891e-51 | -8.615850e-47 |
| Msa0052870 | Msa0527190 | 0.883057 | 6.192562e-71 | -8.615850e-47 |
| Msa0052870 | Msa0531250 | 0.804397 | 2.203600e-49 | -8.615850e-47 |
| Msa0052870 | Msa0541850 | 0.809979 | 1.447601e-50 | -8.615850e-47 |
| Msa0052870 | Msa0544660 | 0.808675 | 2.755987e-50 | -8.615850e-47 |
| Msa0052870 | Msa0549360 | 0.811014 | 8.653316e-51 | -8.615850e-47 |
| Msa0052870 | Msa0553200 | 0.816565 | 5.178425e-52 | -8.615850e-47 |
| Msa0052870 | Msa0556010 | 0.880104 | 7.221676e-70 | -8.615850e-47 |
| Msa0052870 | Msa0561410 | 0.862077 | 6.540692e-64 | -8.615850e-47 |
| Msa0052870 | Msa0572750 | 0.818324 | 2.079984e-52 | -8.615850e-47 |
| Msa0052870 | Msa0573380 | 0.842016 | 3.344347e-58 | -8.615850e-47 |
| Msa0052870 | Msa0574890 | 0.800507 | 1.395344e-48 | -8.615850e-47 |
| Msa0052870 | Msa0576680 | 0.814828 | 1.262863e-51 | -8.615850e-47 |
| Msa0052870 | Msa0579660 | 0.825932 | 3.578785e-54 | -8.615850e-47 |
| Msa0052870 | Msa0581690 | 0.967266 | 4.837501e-127 | -8.615850e-47 |
| Msa0052870 | Msa0583500 | 0.828178 | 1.038521e-54 | -8.615850e-47 |
| Msa0052870 | Msa0584550 | 0.809743 | 1.627370e-50 | -8.615850e-47 |
| Msa0052870 | Msa0590640 | 0.839353 | 1.667389e-57 | -8.615850e-47 |
| Msa0052870 | Msa0597770 | 0.839093 | 1.947032e-57 | -8.615850e-47 |
| Msa0052870 | Msa0601950 | 0.822388 | 2.432410e-53 | -8.615850e-47 |
| Msa0052870 | Msa0615420 | 0.857626 | 1.436300e-62 | -8.615850e-47 |
| Msa0052870 | Msa0619420 | 0.816314 | 5.895125e-52 | -8.615850e-47 |
| Msa0052870 | Msa0624940 | 0.806087 | 9.754013e-50 | -8.615850e-47 |
| Msa0052870 | Msa0626270 | 0.863085 | 3.200704e-64 | -8.615850e-47 |
| Msa0052870 | Msa0626450 | 0.848573 | 5.622858e-60 | -8.615850e-47 |
| Msa0052870 | Msa0626460 | 0.841561 | 4.411228e-58 | -8.615850e-47 |
| Msa0052870 | Msa0626490 | 0.849741 | 2.662003e-60 | -8.615850e-47 |
| Msa0052870 | Msa0630940 | 0.847578 | 1.058595e-59 | -8.615850e-47 |
| Msa0052870 | Msa0640500 | 0.815312 | 9.862973e-52 | -8.615850e-47 |
| Msa0052870 | Msa0650830 | 0.802750 | 4.836608e-49 | -8.615850e-47 |
| Msa0052870 | Msa0659550 | 0.804344 | 2.259964e-49 | -8.615850e-47 |
| Msa0052870 | Msa0663270 | 0.809998 | 1.433784e-50 | -8.615850e-47 |
| Msa0052870 | Msa0664540 | 0.849677 | 2.773134e-60 | -8.615850e-47 |
| Msa0052870 | Msa0664600 | 0.855873 | 4.709463e-62 | -8.615850e-47 |
| Msa0052870 | Msa0669180 | 0.863384 | 2.587487e-64 | -8.615850e-47 |
| Msa0052870 | Msa0679100 | 0.811511 | 6.751485e-51 | -8.615850e-47 |
| Msa0052870 | Msa0689760 | 0.843221 | 1.600859e-58 | -8.615850e-47 |
| Msa0052870 | Msa0692880 | 0.885111 | 1.077625e-71 | -8.615850e-47 |
| Msa0052870 | Msa0698100 | 0.849025 | 4.213980e-60 | -8.615850e-47 |
| Msa0052870 | Msa0698290 | 0.807150 | 5.818218e-50 | -8.615850e-47 |
| Msa0052870 | Msa0698640 | 0.863688 | 2.082246e-64 | -8.615850e-47 |
| Msa0052870 | Msa0702590 | 0.810480 | 1.129004e-50 | -8.615850e-47 |
| Msa0052870 | Msa0702720 | 0.804448 | 2.149663e-49 | -8.615850e-47 |
| Msa0052870 | Msa0703220 | 0.826865 | 2.145210e-54 | -8.615850e-47 |
| Msa0052870 | Msa0706760 | 0.858224 | 9.543196e-63 | -8.615850e-47 |
| Msa0052870 | Msa0713680 | 0.805043 | 1.615250e-49 | -8.615850e-47 |
| Msa0052870 | Msa0716410 | 0.832122 | 1.131692e-55 | -8.615850e-47 |
| Msa0052870 | Msa0716860 | 0.849954 | 2.320228e-60 | -8.615850e-47 |
| Msa0052870 | Msa0721020 | 0.821941 | 3.088308e-53 | -8.615850e-47 |
| Msa0052870 | Msa0740720 | 0.813431 | 2.568355e-51 | -8.615850e-47 |
| Msa0052870 | Msa0744100 | 0.809949 | 1.468997e-50 | -8.615850e-47 |
| Msa0052870 | Msa0749400 | 0.813071 | 3.081783e-51 | -8.615850e-47 |
| Msa0052870 | Msa0751260 | 0.851099 | 1.106168e-60 | -8.615850e-47 |
| Msa0052870 | Msa0756620 | 0.808646 | 2.796154e-50 | -8.615850e-47 |
| Msa0052870 | Msa0757800 | 0.839608 | 1.431452e-57 | -8.615850e-47 |
| Msa0052870 | Msa0795070 | 0.842858 | 2.000372e-58 | -8.615850e-47 |
| Msa0052870 | Msa0797920 | 0.807698 | 4.452368e-50 | -8.615850e-47 |
| Msa0052870 | Msa0799000 | 0.870971 | 9.748483e-67 | -8.615850e-47 |
| Msa0052870 | Msa0800700 | 0.812262 | 4.630745e-51 | -8.615850e-47 |
| Msa0052870 | Msa0804250 | 0.813414 | 2.590551e-51 | -8.615850e-47 |
| Msa0052870 | Msa0815630 | 0.802956 | 4.386521e-49 | -8.615850e-47 |
| Msa0052870 | Msa0825270 | 0.802260 | 6.104646e-49 | -8.615850e-47 |
| Msa0052870 | Msa0826510 | 0.813398 | 2.612103e-51 | -8.615850e-47 |
| Msa0052870 | Msa0835970 | 0.809907 | 1.500039e-50 | -8.615850e-47 |
| Msa0052870 | Msa0837410 | 0.897912 | 8.865756e-77 | -8.615850e-47 |
| Msa0052870 | Msa0861450 | 0.819710 | 1.006920e-52 | -8.615850e-47 |
| Msa0052870 | Msa0861510 | 0.821717 | 3.481361e-53 | -8.615850e-47 |
| Msa0052870 | Msa0861530 | 0.822465 | 2.334897e-53 | -8.615850e-47 |
| Msa0052870 | Msa0861600 | 0.826632 | 2.439223e-54 | -8.615850e-47 |
| Msa0052870 | Msa0865620 | 0.819656 | 1.035663e-52 | -8.615850e-47 |
| Msa0052870 | Msa0870520 | 0.817807 | 2.722421e-52 | -8.615850e-47 |
| Msa0052870 | Msa0870540 | 0.809086 | 2.250754e-50 | -8.615850e-47 |
| Msa0052870 | Msa0871720 | 0.821152 | 4.698986e-53 | -8.615850e-47 |
| Msa0052870 | Msa0903710 | 0.807362 | 5.245227e-50 | -8.615850e-47 |
| Msa0052870 | Msa0910440 | 0.805081 | 1.585863e-49 | -8.615850e-47 |
| Msa0052870 | Msa0929950 | 0.834672 | 2.617726e-56 | -8.615850e-47 |
| Msa0052870 | Msa0930780 | 0.801111 | 1.050317e-48 | -8.615850e-47 |
| Msa0052870 | Msa0936380 | 0.811787 | 5.879782e-51 | -8.615850e-47 |
| Msa0052870 | Msa0937020 | 0.826968 | 2.027420e-54 | -8.615850e-47 |
| Msa0052870 | Msa0944660 | 0.804431 | 2.167277e-49 | -8.615850e-47 |
| Msa0052870 | Msa0945490 | 0.801231 | 9.927568e-49 | -8.615850e-47 |
| Msa0052870 | Msa0960420 | 0.805543 | 1.268881e-49 | -8.615850e-47 |
| Msa0052870 | Msa0962070 | 0.807732 | 4.377269e-50 | -8.615850e-47 |
| Msa0052870 | Msa0973140 | 0.814869 | 1.236677e-51 | -8.615850e-47 |
| Msa0052870 | Msa0974290 | 0.813259 | 2.801612e-51 | -8.615850e-47 |
| Msa0052870 | Msa0984690 | 0.813807 | 2.123138e-51 | -8.615850e-47 |
| Msa0052870 | Msa0984710 | 0.814483 | 1.505871e-51 | -8.615850e-47 |
| Msa0052870 | Msa0993740 | 0.816717 | 4.789887e-52 | -8.615850e-47 |
| Msa0052870 | Msa0993760 | 0.801072 | 1.069802e-48 | -8.615850e-47 |
| Msa0052870 | Msa1010070 | 0.815547 | 8.742434e-52 | -8.615850e-47 |
| Msa0052870 | Msa1022820 | 0.812240 | 4.682713e-51 | -8.615850e-47 |
| Msa0052870 | Msa1027990 | 0.833428 | 5.364824e-56 | -8.615850e-47 |
| Msa0052870 | Msa1028280 | 0.837176 | 6.064374e-57 | -8.615850e-47 |
| Msa0052870 | Msa1028350 | 0.801007 | 1.102966e-48 | -8.615850e-47 |
| Msa0052870 | Msa1031390 | 0.843294 | 1.530633e-58 | -8.615850e-47 |
| Msa0052870 | Msa1034500 | 0.812040 | 5.177701e-51 | -8.615850e-47 |
| Msa0052870 | Msa1036280 | 0.822991 | 1.760925e-53 | -8.615850e-47 |
| Msa0052870 | Msa1038080 | 0.812551 | 4.004134e-51 | -8.615850e-47 |
| Msa0052870 | Msa1050910 | 0.819316 | 1.238160e-52 | -8.615850e-47 |
| Msa0052870 | Msa1050960 | 0.821299 | 4.346898e-53 | -8.615850e-47 |
| Msa0052870 | Msa1059960 | 0.820982 | 5.144176e-53 | -8.615850e-47 |
| Msa0052870 | Msa1061980 | 0.808590 | 2.873749e-50 | -8.615850e-47 |
| Msa0052870 | Msa1067140 | 0.802703 | 4.946395e-49 | -8.615850e-47 |
| Msa0052870 | Msa1072600 | 0.808378 | 3.190240e-50 | -8.615850e-47 |
| Msa0052870 | Msa1076560 | 0.838159 | 3.393904e-57 | -8.615850e-47 |
| Msa0052870 | Msa1085330 | 0.830926 | 2.229990e-55 | -8.615850e-47 |
| Msa0052870 | Msa1088410 | 0.806288 | 8.844997e-50 | -8.615850e-47 |
| Msa0052870 | Msa1095790 | 0.807217 | 5.630137e-50 | -8.615850e-47 |
| Msa0052870 | Msa1105160 | 0.809057 | 2.283547e-50 | -8.615850e-47 |
| Msa0052870 | Msa1116400 | 0.801030 | 1.091261e-48 | -8.615850e-47 |
| Msa0052870 | Msa1127590 | 0.806914 | 6.527710e-50 | -8.615850e-47 |
| Msa0052870 | Msa1129690 | 0.808602 | 2.857079e-50 | -8.615850e-47 |
| Msa0052870 | Msa1145740 | 0.812761 | 3.602724e-51 | -8.615850e-47 |
| Msa0052870 | Msa1155900 | 0.807462 | 4.995615e-50 | -8.615850e-47 |
| Msa0052870 | Msa1160310 | 0.805041 | 1.616656e-49 | -8.615850e-47 |
| Msa0052870 | Msa1165090 | 0.806610 | 7.566392e-50 | -8.615850e-47 |
| Msa0052870 | Msa1169720 | 0.806696 | 7.255597e-50 | -8.615850e-47 |
| Msa0052870 | Msa1174530 | 0.819542 | 1.099596e-52 | -8.615850e-47 |
| Msa0052870 | Msa1198880 | 0.809210 | 2.117248e-50 | -8.615850e-47 |
| Msa0052870 | Msa1205790 | 0.864546 | 1.125265e-64 | -8.615850e-47 |
| Msa0052870 | Msa1205830 | 0.851071 | 1.126913e-60 | -8.615850e-47 |
| Msa0052870 | Msa1206230 | 0.818223 | 2.192568e-52 | -8.615850e-47 |
| Msa0052870 | Msa1211340 | 0.815797 | 7.689532e-52 | -8.615850e-47 |
| Msa0052870 | Msa1219900 | 0.801900 | 7.239844e-49 | -8.615850e-47 |
| Msa0052870 | Msa1223330 | 0.809665 | 1.690866e-50 | -8.615850e-47 |
| Msa0052870 | Msa1224840 | 0.808749 | 2.658441e-50 | -8.615850e-47 |
| Msa0052870 | Msa1234550 | 0.824174 | 9.309376e-54 | -8.615850e-47 |
| Msa0052870 | Msa1235250 | 0.814979 | 1.169069e-51 | -8.615850e-47 |
| Msa0052870 | Msa1252850 | -0.801252 | 9.827947e-49 | -8.615850e-47 |
| Msa0052870 | Msa1258340 | 0.801659 | 8.112051e-49 | -8.615850e-47 |
| Msa0052870 | Msa1259640 | 0.816943 | 4.261863e-52 | -8.615850e-47 |
| Msa0052870 | Msa1262960 | 0.800937 | 1.139839e-48 | -8.615850e-47 |
| Msa0052870 | Msa1269890 | 0.802072 | 6.672181e-49 | -8.615850e-47 |
| Msa0052870 | Msa1276660 | 0.815945 | 7.126702e-52 | -8.615850e-47 |
| Msa0052870 | Msa1277080 | 0.825941 | 3.560850e-54 | -8.615850e-47 |
| Msa0052870 | Msa1277490 | 0.804530 | 2.066563e-49 | -8.615850e-47 |
| Msa0052870 | Msa1282500 | 0.824220 | 9.083845e-54 | -8.615850e-47 |
| Msa0052870 | Msa1297970 | 0.804788 | 1.825973e-49 | -8.615850e-47 |
| Msa0052870 | Msa1302060 | 0.834044 | 3.763683e-56 | -8.615850e-47 |
| Msa0052870 | Msa1305280 | 0.817704 | 2.872736e-52 | -8.615850e-47 |
| Msa0052870 | Msa1320820 | 0.804980 | 1.664477e-49 | -8.615850e-47 |
| Msa0052870 | Msa1326230 | 0.802170 | 6.371214e-49 | -8.615850e-47 |
| Msa0052870 | Msa1326240 | 0.805802 | 1.119515e-49 | -8.615850e-47 |
| Msa0052870 | Msa1328640 | 0.803594 | 3.236398e-49 | -8.615850e-47 |
| Msa0052870 | Msa1329790 | 0.820844 | 5.534141e-53 | -8.615850e-47 |
| Msa0052870 | Msa1330450 | 0.814407 | 1.565222e-51 | -8.615850e-47 |
| Msa0052870 | Msa1331120 | 0.808172 | 3.528440e-50 | -8.615850e-47 |
| Msa0052870 | Msa1333560 | 0.806217 | 9.157406e-50 | -8.615850e-47 |
| Msa0052870 | Msa1333890 | 0.819355 | 1.213199e-52 | -8.615850e-47 |
| Msa0052870 | Msa1335160 | 0.828223 | 1.013071e-54 | -8.615850e-47 |
| Msa0052870 | Msa1338830 | 0.844405 | 7.715725e-59 | -8.615850e-47 |
| Msa0052870 | Msa1348090 | 0.828404 | 9.163271e-55 | -8.615850e-47 |
| Msa0052870 | Msa1354200 | 0.821438 | 4.038400e-53 | -8.615850e-47 |
| Msa0052870 | Msa1364430 | 0.818052 | 2.397474e-52 | -8.615850e-47 |
| Msa0052870 | Msa1365760 | 0.847508 | 1.106490e-59 | -8.615850e-47 |
| Msa0052870 | Msa1369150 | 0.814819 | 1.268558e-51 | -8.615850e-47 |
| Msa0052870 | Msa1371520 | 0.900649 | 5.928527e-78 | -8.615850e-47 |
| Msa0052870 | Msa1371910 | 0.801567 | 8.471522e-49 | -8.615850e-47 |
| Msa0052870 | Msa1373170 | 0.806506 | 7.958208e-50 | -8.615850e-47 |
| Msa0052870 | Msa1373820 | 0.846504 | 2.083815e-59 | -8.615850e-47 |
| Msa0052870 | Msa1393820 | 0.844061 | 9.547194e-59 | -8.615850e-47 |
| Msa0052870 | Msa1401270 | 0.822518 | 2.270047e-53 | -8.615850e-47 |
| Msa0052870 | Msa1409950 | 0.813892 | 2.033007e-51 | -8.615850e-47 |
| Msa0052870 | Msa1411500 | 0.807769 | 4.298702e-50 | -8.615850e-47 |
| Msa0052870 | Msa1411950 | 0.804573 | 2.024131e-49 | -8.615850e-47 |
| Msa0052870 | Msa1418240 | 0.825011 | 5.913286e-54 | -8.615850e-47 |
| Msa0052870 | Msa1420250 | 0.839657 | 1.389960e-57 | -8.615850e-47 |
| Msa0052870 | Msa1422910 | 0.823407 | 1.408583e-53 | -8.615850e-47 |
| Msa0052870 | Msa1427110 | 0.830224 | 3.313295e-55 | -8.615850e-47 |
| Msa0052870 | Msa1432920 | 0.843158 | 1.664320e-58 | -8.615850e-47 |
| Msa0052870 | Msa1437460 | 0.804857 | 1.766349e-49 | -8.615850e-47 |
| Msa0052870 | Msa1439610 | 0.812780 | 3.568116e-51 | -8.615850e-47 |
| Msa0052870 | Msa1440960 | 0.853023 | 3.142585e-61 | -8.615850e-47 |
| Msa0052870 | Msa1443930 | 0.817148 | 3.832442e-52 | -8.615850e-47 |
| Msa0052870 | Msa1446780 | 0.819509 | 1.119044e-52 | -8.615850e-47 |
| Msa0052870 | Msa1447180 | 0.801519 | 8.665151e-49 | -8.615850e-47 |
| Msa0052870 | Msa1449860 | 0.831010 | 2.126491e-55 | -8.615850e-47 |
| Msa0052870 | Msa1453360 | 0.823640 | 1.242458e-53 | -8.615850e-47 |
| Msa0052870 | Msa1459460 | 0.880392 | 5.703149e-70 | -8.615850e-47 |
| Msa0052870 | Msa1459910 | 0.822645 | 2.120589e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052870 | MtrunA17_Chr1g0152041 | 99.603 | 252 | 1 | 0 | 1 | 252 | 1 | 252 | 0.0 | 519 |
| Msa0052870 | MtrunA17_Chr2g0280271 | 61.154 | 260 | 90 | 1 | 2 | 250 | 1 | 260 | 1.61e-120 | 344 |
| Msa0052870 | MtrunA17_Chr4g0054361 | 60.000 | 260 | 94 | 2 | 2 | 252 | 1 | 259 | 2.95e-112 | 323 |
| Msa0052870 | MtrunA17_Chr3g0140311 | 91.667 | 48 | 1 | 1 | 205 | 252 | 1 | 45 | 8.73e-26 | 95.5 |
| Msa0052870 | MtrunA17_Chr3g0140301 | 67.089 | 79 | 17 | 3 | 125 | 203 | 10 | 79 | 1.38e-23 | 91.7 |
| Msa0052870 | MtrunA17_Chr3g0140291 | 81.633 | 49 | 6 | 1 | 59 | 104 | 2 | 50 | 5.75e-22 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0052870 | AT3G49720.2 | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.85e-124 | 354 |
| Msa0052870 | AT3G49720.1 | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.85e-124 | 354 |
| Msa0052870 | AT3G49720.3 | 65.267 | 262 | 79 | 2 | 2 | 252 | 1 | 261 | 1.85e-124 | 354 |
| Msa0052870 | AT5G65810.1 | 62.977 | 262 | 82 | 3 | 2 | 252 | 1 | 258 | 4.08e-120 | 343 |
Find 79 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACAAGAGAGAAAGATTT+TGG | 0.176751 | 1_2:-7243081 | None:intergenic |
| GTAGCAGACGTTTCTAAATT+TGG | 0.181431 | 1_2:+7243831 | Msa0052870:CDS |
| AAGTGGAATATCTGGCATTT+TGG | 0.205441 | 1_2:-7244133 | None:intergenic |
| GAAAGTTAGATCTGAATTAA+AGG | 0.233717 | 1_2:-7240132 | None:intergenic |
| ACTACATTATAAGTTGAATT+AGG | 0.247076 | 1_2:+7244388 | Msa0052870:three_prime_UTR |
| CAATAAAACTCTTCCTGATT+TGG | 0.285100 | 1_2:+7243143 | Msa0052870:CDS |
| GATGGTTTAGTGATATTTAC+TGG | 0.296086 | 1_2:+7243180 | Msa0052870:CDS |
| TTTCCTTCAAAGTAACTTAG+AGG | 0.301335 | 1_2:+7244054 | Msa0052870:CDS |
| TTGAAGTCACTCCATTGATT+TGG | 0.306737 | 1_2:+7244154 | Msa0052870:exon |
| TGACAAAACTGGAGACGATT+TGG | 0.315458 | 1_2:-7240407 | None:intergenic |
| TTCTCATTGGTTACTTGTAC+AGG | 0.330384 | 1_2:+7240566 | Msa0052870:CDS |
| GGTCTCCTCGACATCATTAC+TGG | 0.330750 | 1_2:-7240349 | None:intergenic |
| TCCATTGCTGTTGTTATATG+AGG | 0.352499 | 1_2:+7244509 | Msa0052870:three_prime_UTR |
| AACTGGAGACGATTTGGATT+TGG | 0.354965 | 1_2:-7240401 | None:intergenic |
| CAAAAGTGATACACCATCTA+TGG | 0.357242 | 1_2:-7244290 | None:intergenic |
| AAATTCTGACCACAATTATA+AGG | 0.359359 | 1_2:-7240435 | None:intergenic |
| CCATATGCTTTCTGTAAAAC+AGG | 0.362663 | 1_2:-7242865 | None:intergenic |
| ACCTTGGCCTTCTGATTAGT+TGG | 0.376653 | 1_2:-7243810 | None:intergenic |
| TCAAGTTTCCTCTTCCATAT+AGG | 0.389012 | 1_2:+7243058 | Msa0052870:CDS |
| TGTCCTTTGCCGCTAAGAAT+TGG | 0.392976 | 1_2:-7244348 | None:intergenic |
| GTGACTTCAAGTGGAATATC+TGG | 0.393548 | 1_2:-7244141 | None:intergenic |
| GCTGATACCCTCACCAAATC+AGG | 0.395423 | 1_2:-7243156 | None:intergenic |
| AATCATCAGTTGGGCATTGT+TGG | 0.396221 | 1_2:+7239955 | None:intergenic |
| TCTCCTCTAAGTTACTTTGA+AGG | 0.396518 | 1_2:-7244057 | None:intergenic |
| ATAAGGCCAATTGACAAAAC+TGG | 0.397117 | 1_2:-7240418 | None:intergenic |
| TTTAGAAACGTCTGCTACCT+TGG | 0.402863 | 1_2:-7243826 | None:intergenic |
| TGATAAATATTCGCCATAGA+TGG | 0.407752 | 1_2:+7244277 | Msa0052870:three_prime_UTR |
| TGGTTCTATACCCCAGGCTT+CGG | 0.413733 | 1_2:-7242965 | None:intergenic |
| GCCGTTTAGATTCTGTTAGC+AGG | 0.417799 | 1_2:+7240821 | Msa0052870:CDS |
| AATAACACTCTTCTCTTCAC+TGG | 0.420317 | 1_2:+7240182 | Msa0052870:five_prime_UTR |
| GGTTACTTGTACAGGGGCTC+AGG | 0.420689 | 1_2:+7240574 | Msa0052870:CDS |
| TGTAATTGTTTCAGATACTC+TGG | 0.424438 | 1_2:+7243098 | Msa0052870:CDS |
| TAGGGAGGCTTGTTTCTCAT+TGG | 0.425163 | 1_2:+7240553 | Msa0052870:intron |
| CGGCAAAGGACATAACGATT+TGG | 0.430678 | 1_2:+7244359 | Msa0052870:three_prime_UTR |
| CTCATTGGTTACTTGTACAG+GGG | 0.431130 | 1_2:+7240568 | Msa0052870:CDS |
| AATCTTCTAGAAGAAGTTCC+AGG | 0.440271 | 1_2:-7240370 | None:intergenic |
| AGGAAGATGAAACCGAAGCC+TGG | 0.442655 | 1_2:+7242953 | Msa0052870:CDS |
| TCTGAATTAAAGGAGAGAAT+AGG | 0.443149 | 1_2:-7240122 | None:intergenic |
| CCCTGCTAACAGAATCTAAA+CGG | 0.453868 | 1_2:-7240822 | None:intergenic |
| GGAACTTCTTCTAGAAGATT+CGG | 0.454951 | 1_2:+7240373 | Msa0052870:CDS |
| GTCAATTGGCCTTATAATTG+TGG | 0.457375 | 1_2:+7240426 | Msa0052870:CDS |
| TCAGCATCCTCTATATCATA+TGG | 0.464095 | 1_2:-7242985 | None:intergenic |
| GATTCTGTTAGCAGGGTTGA+AGG | 0.466384 | 1_2:+7240829 | Msa0052870:CDS |
| TCTCATTGGTTACTTGTACA+GGG | 0.473655 | 1_2:+7240567 | Msa0052870:CDS |
| ATTTATCAACTCCAAATCAA+TGG | 0.474158 | 1_2:-7244165 | None:intergenic |
| CTACACGCACATTGCCTCTA+CGG | 0.486209 | 1_2:-7243029 | None:intergenic |
| GAGACCACATAACAAGTGTC+TGG | 0.486625 | 1_2:-7242919 | None:intergenic |
| TTTGAAATACCAATTCTTAG+CGG | 0.492677 | 1_2:+7244339 | Msa0052870:three_prime_UTR |
| GGAAGATGAAACCGAAGCCT+GGG | 0.497641 | 1_2:+7242954 | Msa0052870:CDS |
| CTAAGATGAGGAGTGGATCC+TGG | 0.502597 | 1_2:+7244020 | Msa0052870:CDS |
| TGTGGTCTCTAAATTGCAAA+AGG | 0.503512 | 1_2:+7242933 | Msa0052870:CDS |
| TAGGTGATCTATAATTTAAG+TGG | 0.506752 | 1_2:+7244407 | Msa0052870:three_prime_UTR |
| TATAGAACCATATGATATAG+AGG | 0.516192 | 1_2:+7242978 | Msa0052870:CDS |
| ATCTATAATTTAAGTGGCAG+TGG | 0.516568 | 1_2:+7244413 | Msa0052870:three_prime_UTR |
| ATCAATGGAGTGACTTCAAG+TGG | 0.523164 | 1_2:-7244150 | None:intergenic |
| GTAATGATGTCGAGGAGACC+TGG | 0.528090 | 1_2:+7240352 | Msa0052870:exon |
| ATCATATGGTTCTATACCCC+AGG | 0.528710 | 1_2:-7242971 | None:intergenic |
| TTGTATATAGGTGGACTTGG+AGG | 0.538889 | 1_2:+7240799 | Msa0052870:intron |
| TTCATTCAGCGACTGTCGGT+TGG | 0.539699 | 1_2:-7239985 | None:intergenic |
| AACTCTTCCTGATTTGGTGA+GGG | 0.539875 | 1_2:+7243149 | Msa0052870:CDS |
| CCGTTTAGATTCTGTTAGCA+GGG | 0.545887 | 1_2:+7240822 | Msa0052870:CDS |
| TTGCTTCATTCAGCGACTGT+CGG | 0.550762 | 1_2:-7239989 | None:intergenic |
| TTGGTGAGGGTATCAGCTGA+TGG | 0.552785 | 1_2:+7243162 | Msa0052870:CDS |
| AAACTCTTCCTGATTTGGTG+AGG | 0.567840 | 1_2:+7243148 | Msa0052870:CDS |
| CGTTTCTAAATTTGGAAGAG+CGG | 0.568253 | 1_2:+7243839 | Msa0052870:CDS |
| TGATTATTTGTGCAGTGGTG+AGG | 0.575702 | 1_2:+7242828 | Msa0052870:CDS |
| TCCAACTAATCAGAAGGCCA+AGG | 0.581897 | 1_2:+7243809 | Msa0052870:CDS |
| TCCTCATATAACAACAGCAA+TGG | 0.582523 | 1_2:-7244510 | None:intergenic |
| CTTCAGGCTAAGATGAGGAG+TGG | 0.587352 | 1_2:+7244013 | Msa0052870:intron |
| TGGTCCAGACACTTGTTATG+TGG | 0.588659 | 1_2:+7242915 | Msa0052870:CDS |
| ATACCAATTCTTAGCGGCAA+AGG | 0.591720 | 1_2:+7244345 | Msa0052870:three_prime_UTR |
| GTAAAACAGGAATTGCTCGT+TGG | 0.599584 | 1_2:-7242852 | None:intergenic |
| TGAATCCAGTAATGATGTCG+AGG | 0.637330 | 1_2:+7240344 | Msa0052870:exon |
| GATGAGGAGTGGATCCTGGT+GGG | 0.642314 | 1_2:+7244024 | Msa0052870:CDS |
| GCAGGTGATTATTTGTGCAG+TGG | 0.650350 | 1_2:+7242823 | Msa0052870:intron |
| TGATAAATTGAGTAGCATTG+CGG | 0.665382 | 1_2:+7244180 | Msa0052870:three_prime_UTR |
| AGATGAGGAGTGGATCCTGG+TGG | 0.665807 | 1_2:+7244023 | Msa0052870:CDS |
| TGCAAAGCACAAATCCGTAG+AGG | 0.674784 | 1_2:+7243015 | Msa0052870:CDS |
| GAAGATGAAACCGAAGCCTG+GGG | 0.688039 | 1_2:+7242955 | Msa0052870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTCAAATAACTAT+CGG | + | chr1_2:7240699-7240718 | Msa0052870:intron | 10.0% |
| !!! | ATTTTCAATTATTTCTATTT+TGG | + | chr1_2:7240902-7240921 | Msa0052870:intron | 10.0% |
| !!! | TATAATATATTGTTTTTGAT+TGG | + | chr1_2:7241011-7241030 | Msa0052870:intron | 10.0% |
| !! | TAGAAATAATTGAAAATTGA+AGG | - | chr1_2:7240899-7240918 | None:intergenic | 15.0% |
| !!! | TATTTTGGTTGTTTTTTATT+TGG | + | chr1_2:7240917-7240936 | Msa0052870:intron | 15.0% |
| !!! | ATAATTATGCCATTTTTTAT+TGG | + | chr1_2:7240946-7240965 | Msa0052870:intron | 15.0% |
| !!! | TTAAATAAAAGTACCTATTA+AGG | + | chr1_2:7241496-7241515 | Msa0052870:intron | 15.0% |
| !!! | TTTATTACTTTTTTTAAACG+TGG | + | chr1_2:7241698-7241717 | Msa0052870:intron | 15.0% |
| !!! | TTATTACTTTTTTTAAACGT+GGG | + | chr1_2:7241699-7241718 | Msa0052870:intron | 15.0% |
| !!! | TTTATTTTGGATCAATAATT+GGG | - | chr1_2:7242291-7242310 | None:intergenic | 15.0% |
| !! | ATGTTAATAAAAATGGATAA+GGG | + | chr1_2:7242538-7242557 | Msa0052870:intron | 15.0% |
| !! | CTGTATTATTACAAAATATA+TGG | - | chr1_2:7242790-7242809 | None:intergenic | 15.0% |
| !!! | AAACATAGTTTTAACATAAA+TGG | - | chr1_2:7243352-7243371 | None:intergenic | 15.0% |
| !!! | AAGTATGATTAGATATTTTT+TGG | + | chr1_2:7243509-7243528 | Msa0052870:intron | 15.0% |
| !!! | AGTATGATTAGATATTTTTT+GGG | + | chr1_2:7243510-7243529 | Msa0052870:intron | 15.0% |
| !!! | TAATTTTGTTTTTGCAATGT+AGG | + | chr1_2:7240534-7240553 | Msa0052870:intron | 20.0% |
| !!! | AATTTTGTTTTTGCAATGTA+GGG | + | chr1_2:7240535-7240554 | Msa0052870:intron | 20.0% |
| !! | TCAAATTGGAAATTCATAAT+GGG | - | chr1_2:7241066-7241085 | None:intergenic | 20.0% |
| !! | TTCAAATTGGAAATTCATAA+TGG | - | chr1_2:7241067-7241086 | None:intergenic | 20.0% |
| !!! | ATTGTACTTGGTAAATTTTA+TGG | + | chr1_2:7242253-7242272 | Msa0052870:intron | 20.0% |
| !!! | CTTTATTTTGGATCAATAAT+TGG | - | chr1_2:7242292-7242311 | None:intergenic | 20.0% |
| !!! | CTTTGAGATGTTAATAAAAA+TGG | + | chr1_2:7242531-7242550 | Msa0052870:intron | 20.0% |
| !! | GATGTTAATAAAAATGGATA+AGG | + | chr1_2:7242537-7242556 | Msa0052870:intron | 20.0% |
| !! | AAAATAAAGTTTACTCAGAT+GGG | - | chr1_2:7243232-7243251 | None:intergenic | 20.0% |
| !! | AAAAATAAAGTTTACTCAGA+TGG | - | chr1_2:7243233-7243252 | None:intergenic | 20.0% |
| !! | AACTTGCATTAAGTTTATTA+CGG | + | chr1_2:7243280-7243299 | Msa0052870:intron | 20.0% |
| !!! | ACTACATTATAAGTTGAATT+AGG | + | chr1_2:7244388-7244407 | Msa0052870:three_prime_UTR | 20.0% |
| ! | GAAAGTTAGATCTGAATTAA+AGG | - | chr1_2:7240135-7240154 | None:intergenic | 25.0% |
| ! | AAATTCTGACCACAATTATA+AGG | - | chr1_2:7240438-7240457 | None:intergenic | 25.0% |
| !! | TTAAGCTGTGTTTTGTATAT+AGG | + | chr1_2:7240787-7240806 | Msa0052870:intron | 25.0% |
| ! | AAGTTACAGCCAATAAAAAA+TGG | - | chr1_2:7240958-7240977 | None:intergenic | 25.0% |
| ! | CAAATTGGAAATTCATAATG+GGG | - | chr1_2:7241065-7241084 | None:intergenic | 25.0% |
| ! | AATTGGAACAGATTTCAAAT+TGG | - | chr1_2:7241080-7241099 | None:intergenic | 25.0% |
| !! | TATTACTCCTTTTTACAAGT+GGG | + | chr1_2:7241618-7241637 | Msa0052870:intron | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr1_2:7241645-7241664 | None:intergenic | 25.0% |
| ! | GTAATAAAATGTGTACTACT+TGG | - | chr1_2:7241645-7241664 | None:intergenic | 25.0% |
| ! | TTAATTATGCTATGGATTCT+AGG | - | chr1_2:7241951-7241970 | None:intergenic | 25.0% |
| !! | TTAGTGAAGAATTCTTTTAC+TGG | - | chr1_2:7242109-7242128 | None:intergenic | 25.0% |
| ! | ATTCTTCACTAAAGAAAACT+TGG | + | chr1_2:7242117-7242136 | Msa0052870:intron | 25.0% |
| !! | CAAACCATGTTTTCAAATAA+CGG | + | chr1_2:7242153-7242172 | Msa0052870:intron | 25.0% |
| ! | TCTGTGATGTCTATATATTT+AGG | + | chr1_2:7242224-7242243 | Msa0052870:intron | 25.0% |
| !! | TTTAGGTTCATTATTGTACT+TGG | + | chr1_2:7242241-7242260 | Msa0052870:intron | 25.0% |
| !!! | CTAGATCTTAGTCTTTATTT+TGG | - | chr1_2:7242304-7242323 | None:intergenic | 25.0% |
| ! | AAAGACTAAGATCTAGAAAA+TGG | + | chr1_2:7242308-7242327 | Msa0052870:intron | 25.0% |
| ! | AAGACTAAGATCTAGAAAAT+GGG | + | chr1_2:7242309-7242328 | Msa0052870:intron | 25.0% |
| ! | AAATCGTTAAATATTGCGTA+TGG | + | chr1_2:7242374-7242393 | Msa0052870:intron | 25.0% |
| ! | TGGTTATCATAAATCAGAAA+CGG | + | chr1_2:7242394-7242413 | Msa0052870:intron | 25.0% |
| ! | TAATAAAAATGGATAAGGGT+AGG | + | chr1_2:7242542-7242561 | Msa0052870:intron | 25.0% |
| ! | AATAAAAATGGATAAGGGTA+GGG | + | chr1_2:7242543-7242562 | Msa0052870:intron | 25.0% |
| !! | TTTGGTAGTATTATCAAATG+AGG | - | chr1_2:7242595-7242614 | None:intergenic | 25.0% |
| ! | TATAGAACCATATGATATAG+AGG | + | chr1_2:7242978-7242997 | Msa0052870:CDS | 25.0% |
| !! | ATTACAAGAGAGAAAGATTT+TGG | - | chr1_2:7243084-7243103 | None:intergenic | 25.0% |
| ! | TTAATGCAAGTTTCATGTTA+AGG | - | chr1_2:7243272-7243291 | None:intergenic | 25.0% |
| !!! | TAATTTTTTTCAGCTGAGTT+CGG | + | chr1_2:7243412-7243431 | Msa0052870:intron | 25.0% |
| !! | TTTTTATATACTGCTGATGT+TGG | + | chr1_2:7243697-7243716 | Msa0052870:intron | 25.0% |
| ! | ATAATCATCTCTTCAAATGA+AGG | + | chr1_2:7243783-7243802 | Msa0052870:intron | 25.0% |
| ! | ATTTATCAACTCCAAATCAA+TGG | - | chr1_2:7244168-7244187 | None:intergenic | 25.0% |
| !! | TTTGAAATACCAATTCTTAG+CGG | + | chr1_2:7244339-7244358 | Msa0052870:three_prime_UTR | 25.0% |
| ! | TAGGTGATCTATAATTTAAG+TGG | + | chr1_2:7244407-7244426 | Msa0052870:three_prime_UTR | 25.0% |
| TCTGAATTAAAGGAGAGAAT+AGG | - | chr1_2:7240125-7240144 | None:intergenic | 30.0% | |
| ! | TGAATTATGCATCGATAATG+AGG | - | chr1_2:7240465-7240484 | None:intergenic | 30.0% |
| TTGAAGCAAGAAAGAATAAG+AGG | - | chr1_2:7240613-7240632 | None:intergenic | 30.0% | |
| ! | AGTGATTCATAGTTCTTTTG+TGG | + | chr1_2:7240737-7240756 | Msa0052870:intron | 30.0% |
| AAGTATTATACAACAACCCT+AGG | + | chr1_2:7241277-7241296 | Msa0052870:intron | 30.0% | |
| TCACAAATTGTAAGTGACAA+AGG | - | chr1_2:7241331-7241350 | None:intergenic | 30.0% | |
| CCTTATTAGTGTATTACCAT+TGG | - | chr1_2:7241533-7241552 | None:intergenic | 30.0% | |
| CCAATGGTAATACACTAATA+AGG | + | chr1_2:7241530-7241549 | Msa0052870:intron | 30.0% | |
| ! | CTATTACTCCTTTTTACAAG+TGG | + | chr1_2:7241617-7241636 | Msa0052870:intron | 30.0% |
| TTATTACTCCTTTATGCAAG+TGG | + | chr1_2:7241658-7241677 | Msa0052870:intron | 30.0% | |
| TATTACTCCTTTATGCAAGT+GGG | + | chr1_2:7241659-7241678 | Msa0052870:intron | 30.0% | |
| ! | AGTGATGCTTATTTCTTTCT+GGG | + | chr1_2:7241904-7241923 | Msa0052870:intron | 30.0% |
| GAGAAGTCTTAATTATGCTA+TGG | - | chr1_2:7241959-7241978 | None:intergenic | 30.0% | |
| !!! | TTTTTTCTCTTGAAGCAAAC+AGG | - | chr1_2:7242047-7242066 | None:intergenic | 30.0% |
| GTTTGCTTCAAGAGAAAAAA+TGG | + | chr1_2:7242047-7242066 | Msa0052870:intron | 30.0% | |
| AAGAGAAAAAATGGAGTGAT+AGG | + | chr1_2:7242056-7242075 | Msa0052870:intron | 30.0% | |
| TAAAGAAAACTTGGCTAAGA+AGG | + | chr1_2:7242126-7242145 | Msa0052870:intron | 30.0% | |
| AACACCGTTATTTGAAAACA+TGG | - | chr1_2:7242160-7242179 | None:intergenic | 30.0% | |
| CGATTTCAAAGAATGTATGT+TGG | - | chr1_2:7242360-7242379 | None:intergenic | 30.0% | |
| TGAGAAATGAACATAATGAG+AGG | + | chr1_2:7242443-7242462 | Msa0052870:intron | 30.0% | |
| AATGAACATAATGAGAGGTT+TGG | + | chr1_2:7242448-7242467 | Msa0052870:intron | 30.0% | |
| TTGGTTTCTTTCTCTTTGTT+TGG | + | chr1_2:7242467-7242486 | Msa0052870:intron | 30.0% | |
| ! | TTTGGATGTTTAAAATCCAC+TGG | + | chr1_2:7242485-7242504 | Msa0052870:intron | 30.0% |
| TTACCAATAAGTCATTGTGT+TGG | - | chr1_2:7242666-7242685 | None:intergenic | 30.0% | |
| TGTTAATGACAGAGAACAAA+GGG | - | chr1_2:7242696-7242715 | None:intergenic | 30.0% | |
| ATGTTAATGACAGAGAACAA+AGG | - | chr1_2:7242697-7242716 | None:intergenic | 30.0% | |
| ! | ATGCATAAAGTTTTGCATGT+TGG | + | chr1_2:7242895-7242914 | Msa0052870:CDS | 30.0% |
| TGTAATTGTTTCAGATACTC+TGG | + | chr1_2:7243098-7243117 | Msa0052870:CDS | 30.0% | |
| !!! | AGAGTTTTATTGAGGTATCT+GGG | - | chr1_2:7243135-7243154 | None:intergenic | 30.0% |
| !!! | AAGAGTTTTATTGAGGTATC+TGG | - | chr1_2:7243136-7243155 | None:intergenic | 30.0% |
| !!! | AATCAGGAAGAGTTTTATTG+AGG | - | chr1_2:7243143-7243162 | None:intergenic | 30.0% |
| CAATAAAACTCTTCCTGATT+TGG | + | chr1_2:7243143-7243162 | Msa0052870:CDS | 30.0% | |
| GATGGTTTAGTGATATTTAC+TGG | + | chr1_2:7243180-7243199 | Msa0052870:CDS | 30.0% | |
| ! | CTGATTAGTTCAAACTTCAA+AGG | + | chr1_2:7243459-7243478 | Msa0052870:intron | 30.0% |
| ! | TATTTGAAGTAGTGTGTTTG+AGG | + | chr1_2:7243667-7243686 | Msa0052870:intron | 30.0% |
| TAATATCCTCTGCTTCAAAA+AGG | - | chr1_2:7243932-7243951 | None:intergenic | 30.0% | |
| TTTCCTTCAAAGTAACTTAG+AGG | + | chr1_2:7244054-7244073 | Msa0052870:CDS | 30.0% | |
| TGATAAATTGAGTAGCATTG+CGG | + | chr1_2:7244180-7244199 | Msa0052870:three_prime_UTR | 30.0% | |
| TGATAAATATTCGCCATAGA+TGG | + | chr1_2:7244277-7244296 | Msa0052870:three_prime_UTR | 30.0% | |
| ATCTATAATTTAAGTGGCAG+TGG | + | chr1_2:7244413-7244432 | Msa0052870:three_prime_UTR | 30.0% | |
| AATAACACTCTTCTCTTCAC+TGG | + | chr1_2:7240182-7240201 | Msa0052870:five_prime_UTR | 35.0% | |
| AGAGAGAAATAGATCTGGAA+TGG | - | chr1_2:7240219-7240238 | None:intergenic | 35.0% | |
| GTAAGAGAGAGAAATAGATC+TGG | - | chr1_2:7240224-7240243 | None:intergenic | 35.0% | |
| ATATGATACGAAAACGCGTA+TGG | - | chr1_2:7240252-7240271 | None:intergenic | 35.0% | |
| ! | AATCTTCTAGAAGAAGTTCC+AGG | - | chr1_2:7240373-7240392 | None:intergenic | 35.0% |
| ! | GGAACTTCTTCTAGAAGATT+CGG | + | chr1_2:7240373-7240392 | Msa0052870:CDS | 35.0% |
| ATAAGGCCAATTGACAAAAC+TGG | - | chr1_2:7240421-7240440 | None:intergenic | 35.0% | |
| !! | GTCAATTGGCCTTATAATTG+TGG | + | chr1_2:7240426-7240445 | Msa0052870:CDS | 35.0% |
| !!! | TTTGTTTTTGCAATGTAGGG+AGG | + | chr1_2:7240538-7240557 | Msa0052870:intron | 35.0% |
| ! | TTCTCATTGGTTACTTGTAC+AGG | + | chr1_2:7240566-7240585 | Msa0052870:CDS | 35.0% |
| ! | TCTCATTGGTTACTTGTACA+GGG | + | chr1_2:7240567-7240586 | Msa0052870:CDS | 35.0% |
| ! | AGCTGTGTTTTGTATATAGG+TGG | + | chr1_2:7240790-7240809 | Msa0052870:intron | 35.0% |
| !! | GTTTTGTATATAGGTGGACT+TGG | + | chr1_2:7240796-7240815 | Msa0052870:intron | 35.0% |
| ! | GCTGTAACTTGTGTCTTATT+TGG | + | chr1_2:7240968-7240987 | Msa0052870:intron | 35.0% |
| ! | CCAAACAATGCAAGACTTTT+TGG | - | chr1_2:7241105-7241124 | None:intergenic | 35.0% |
| CCAAAAAGTCTTGCATTGTT+TGG | + | chr1_2:7241102-7241121 | Msa0052870:intron | 35.0% | |
| GAAGTAAATGACATCTCAGT+GGG | - | chr1_2:7241174-7241193 | None:intergenic | 35.0% | |
| TGAAGTAAATGACATCTCAG+TGG | - | chr1_2:7241175-7241194 | None:intergenic | 35.0% | |
| CATTTAAGGAGTCCTTGTTA+GGG | - | chr1_2:7241443-7241462 | None:intergenic | 35.0% | |
| AAATAAGTGATGTGTCACGT+GGG | - | chr1_2:7241469-7241488 | None:intergenic | 35.0% | |
| TAAATAAGTGATGTGTCACG+TGG | - | chr1_2:7241470-7241489 | None:intergenic | 35.0% | |
| GAAAAAATGAGTCCCTGATA+AGG | - | chr1_2:7241773-7241792 | None:intergenic | 35.0% | |
| !!! | CTCATTTTTTCTTCCTCCAA+TGG | + | chr1_2:7241782-7241801 | Msa0052870:intron | 35.0% |
| !!! | ATTTTTTCTTCCTCCAATGG+AGG | + | chr1_2:7241785-7241804 | Msa0052870:intron | 35.0% |
| !!! | TTTTTTCTTCCTCCAATGGA+GGG | + | chr1_2:7241786-7241805 | Msa0052870:intron | 35.0% |
| !! | ATTCTAAGAGCATCTCCAAT+GGG | - | chr1_2:7241848-7241867 | None:intergenic | 35.0% |
| ! | CAGTGATGCTTATTTCTTTC+TGG | + | chr1_2:7241903-7241922 | Msa0052870:intron | 35.0% |
| TTGTTTGATACGAGAGAAAC+TGG | + | chr1_2:7242002-7242021 | Msa0052870:intron | 35.0% | |
| TGTTTGATACGAGAGAAACT+GGG | + | chr1_2:7242003-7242022 | Msa0052870:intron | 35.0% | |
| ! | TCACAGACACAAATTGGTTT+AGG | - | chr1_2:7242211-7242230 | None:intergenic | 35.0% |
| TAGACATCACAGACACAAAT+TGG | - | chr1_2:7242217-7242236 | None:intergenic | 35.0% | |
| ! | TGTTTAAAATCCACTGGAGT+TGG | + | chr1_2:7242491-7242510 | Msa0052870:intron | 35.0% |
| ! | GTTTAAAATCCACTGGAGTT+GGG | + | chr1_2:7242492-7242511 | Msa0052870:intron | 35.0% |
| ! | TTTAAAATCCACTGGAGTTG+GGG | + | chr1_2:7242493-7242512 | Msa0052870:intron | 35.0% |
| ACATAAAGACGCAACTAGTT+TGG | - | chr1_2:7242613-7242632 | None:intergenic | 35.0% | |
| TTGGATGAATGGAGAACAAA+GGG | - | chr1_2:7242647-7242666 | None:intergenic | 35.0% | |
| AAGTCATTGTGTTGGATGAA+TGG | - | chr1_2:7242658-7242677 | None:intergenic | 35.0% | |
| CATCCAACACAATGACTTAT+TGG | + | chr1_2:7242660-7242679 | Msa0052870:intron | 35.0% | |
| !! | TACAGATAACTTGTTGATGC+AGG | + | chr1_2:7242805-7242824 | Msa0052870:intron | 35.0% |
| CCATATGCTTTCTGTAAAAC+AGG | - | chr1_2:7242868-7242887 | None:intergenic | 35.0% | |
| !! | CCTGTTTTACAGAAAGCATA+TGG | + | chr1_2:7242865-7242884 | Msa0052870:CDS | 35.0% |
| TGTGGTCTCTAAATTGCAAA+AGG | + | chr1_2:7242933-7242952 | Msa0052870:CDS | 35.0% | |
| TCAGCATCCTCTATATCATA+TGG | - | chr1_2:7242988-7243007 | None:intergenic | 35.0% | |
| TCAAGTTTCCTCTTCCATAT+AGG | + | chr1_2:7243058-7243077 | Msa0052870:CDS | 35.0% | |
| !! | GAGAAAGATTTTGGCCTATA+TGG | - | chr1_2:7243075-7243094 | None:intergenic | 35.0% |
| !!! | AGTTTTATTGAGGTATCTGG+GGG | - | chr1_2:7243133-7243152 | None:intergenic | 35.0% |
| !!! | GAGTTTTATTGAGGTATCTG+GGG | - | chr1_2:7243134-7243153 | None:intergenic | 35.0% |
| TTACTGGTAAGTGCATTTCA+TGG | + | chr1_2:7243196-7243215 | Msa0052870:intron | 35.0% | |
| CTTCTGAATCAAAGTGATTC+TGG | - | chr1_2:7243377-7243396 | None:intergenic | 35.0% | |
| TAGTTCAAACTTCAAAGGCA+TGG | + | chr1_2:7243464-7243483 | Msa0052870:intron | 35.0% | |
| ! | AGGTTTTCCAACTAATCAGA+AGG | + | chr1_2:7243803-7243822 | Msa0052870:intron | 35.0% |
| GTAGCAGACGTTTCTAAATT+TGG | + | chr1_2:7243831-7243850 | Msa0052870:CDS | 35.0% | |
| CGTTTCTAAATTTGGAAGAG+CGG | + | chr1_2:7243839-7243858 | Msa0052870:CDS | 35.0% | |
| ! | AACTCATTCCTTTTTGCTTC+AGG | + | chr1_2:7243997-7244016 | Msa0052870:intron | 35.0% |
| ! | TCTCCTCTAAGTTACTTTGA+AGG | - | chr1_2:7244060-7244079 | None:intergenic | 35.0% |
| ! | AAGTGGAATATCTGGCATTT+TGG | - | chr1_2:7244136-7244155 | None:intergenic | 35.0% |
| ! | TTGAAGTCACTCCATTGATT+TGG | + | chr1_2:7244154-7244173 | Msa0052870:exon | 35.0% |
| CAAAAGTGATACACCATCTA+TGG | - | chr1_2:7244293-7244312 | None:intergenic | 35.0% | |
| TGAATCCAGTAATGATGTCG+AGG | + | chr1_2:7240344-7240363 | Msa0052870:exon | 40.0% | |
| ! | AACTGGAGACGATTTGGATT+TGG | - | chr1_2:7240404-7240423 | None:intergenic | 40.0% |
| TGACAAAACTGGAGACGATT+TGG | - | chr1_2:7240410-7240429 | None:intergenic | 40.0% | |
| !! | TCGTCTCCAGTTTTGTCAAT+TGG | + | chr1_2:7240412-7240431 | Msa0052870:CDS | 40.0% |
| ! | CTCATTGGTTACTTGTACAG+GGG | + | chr1_2:7240568-7240587 | Msa0052870:CDS | 40.0% |
| ! | TTGTATATAGGTGGACTTGG+AGG | + | chr1_2:7240799-7240818 | Msa0052870:intron | 40.0% |
| CCCTGCTAACAGAATCTAAA+CGG | - | chr1_2:7240825-7240844 | None:intergenic | 40.0% | |
| CCGTTTAGATTCTGTTAGCA+GGG | + | chr1_2:7240822-7240841 | Msa0052870:CDS | 40.0% | |
| !! | TGCAAGACTTTTTGGCGAAT+TGG | - | chr1_2:7241097-7241116 | None:intergenic | 40.0% |
| TTACTTCAGACAAAAACGCG+AGG | + | chr1_2:7241187-7241206 | Msa0052870:intron | 40.0% | |
| TACTTCAGACAAAAACGCGA+GGG | + | chr1_2:7241188-7241207 | Msa0052870:intron | 40.0% | |
| ACATACAGATACACGACCTA+GGG | - | chr1_2:7241296-7241315 | None:intergenic | 40.0% | |
| TGAGATTGCTGCATCAAATG+CGG | + | chr1_2:7241381-7241400 | Msa0052870:intron | 40.0% | |
| TTGTTAGGGAACTACCATTG+TGG | - | chr1_2:7241429-7241448 | None:intergenic | 40.0% | |
| ACAATGGTAGTTCCCTAACA+AGG | + | chr1_2:7241428-7241447 | Msa0052870:intron | 40.0% | |
| CCATTTAAGGAGTCCTTGTT+AGG | - | chr1_2:7241444-7241463 | None:intergenic | 40.0% | |
| CCTAACAAGGACTCCTTAAA+TGG | + | chr1_2:7241441-7241460 | Msa0052870:intron | 40.0% | |
| AATAAGTGATGTGTCACGTG+GGG | - | chr1_2:7241468-7241487 | None:intergenic | 40.0% | |
| GGAGTCATTGAGTCCTTAAT+AGG | - | chr1_2:7241512-7241531 | None:intergenic | 40.0% | |
| TAAGGACTCAATGACTCCAA+TGG | + | chr1_2:7241514-7241533 | Msa0052870:intron | 40.0% | |
| ACTTGGTCCCACTTGTAAAA+AGG | - | chr1_2:7241628-7241647 | None:intergenic | 40.0% | |
| TATCTCTCCTGGGTAACTAA+CGG | - | chr1_2:7241727-7241746 | None:intergenic | 40.0% | |
| TTAGTTACCCAGGAGAGATA+GGG | + | chr1_2:7241727-7241746 | Msa0052870:intron | 40.0% | |
| AAGGAACGGGCAACTATATA+AGG | - | chr1_2:7241754-7241773 | None:intergenic | 40.0% | |
| AATGAGTCCCTGATAAGGAA+CGG | - | chr1_2:7241768-7241787 | None:intergenic | 40.0% | |
| !! | TTCTAAGAGCATCTCCAATG+GGG | - | chr1_2:7241847-7241866 | None:intergenic | 40.0% |
| !! | CATTCTAAGAGCATCTCCAA+TGG | - | chr1_2:7241849-7241868 | None:intergenic | 40.0% |
| AGTGATAGGAAACTTAGCAG+CGG | + | chr1_2:7242070-7242089 | Msa0052870:intron | 40.0% | |
| ! | AATTCTTTTACTGGCGAGTG+AGG | - | chr1_2:7242100-7242119 | None:intergenic | 40.0% |
| TTAAAATCCACTGGAGTTGG+GGG | + | chr1_2:7242494-7242513 | Msa0052870:intron | 40.0% | |
| AAATGGATAAGGGTAGGGAT+AGG | + | chr1_2:7242548-7242567 | Msa0052870:intron | 40.0% | |
| GTTGGATGAATGGAGAACAA+AGG | - | chr1_2:7242648-7242667 | None:intergenic | 40.0% | |
| ! | ATCTAGTAGCAGTTAGCTTG+CGG | + | chr1_2:7242752-7242771 | Msa0052870:intron | 40.0% |
| TGATTATTTGTGCAGTGGTG+AGG | + | chr1_2:7242828-7242847 | Msa0052870:CDS | 40.0% | |
| GTAAAACAGGAATTGCTCGT+TGG | - | chr1_2:7242855-7242874 | None:intergenic | 40.0% | |
| ! | ATCATATGGTTCTATACCCC+AGG | - | chr1_2:7242974-7242993 | None:intergenic | 40.0% |
| !! | GATTTTGGCCTATATGGAAG+AGG | - | chr1_2:7243069-7243088 | None:intergenic | 40.0% |
| !! | AAACTCTTCCTGATTTGGTG+AGG | + | chr1_2:7243148-7243167 | Msa0052870:CDS | 40.0% |
| !! | AACTCTTCCTGATTTGGTGA+GGG | + | chr1_2:7243149-7243168 | Msa0052870:CDS | 40.0% |
| TTACAACTTACAACCCCAAG+TGG | + | chr1_2:7243303-7243322 | Msa0052870:intron | 40.0% | |
| TACAACTTACAACCCCAAGT+GGG | + | chr1_2:7243304-7243323 | Msa0052870:intron | 40.0% | |
| ! | CTATAACCTTTTCCCACTTG+GGG | - | chr1_2:7243319-7243338 | None:intergenic | 40.0% |
| ! | CCTATAACCTTTTCCCACTT+GGG | - | chr1_2:7243320-7243339 | None:intergenic | 40.0% |
| ! | TCCTATAACCTTTTCCCACT+TGG | - | chr1_2:7243321-7243340 | None:intergenic | 40.0% |
| !! | CTTTGATTCAGAAGCACTAG+AGG | + | chr1_2:7243383-7243402 | Msa0052870:intron | 40.0% |
| TGGGAAAATTGCACCTGTTA+AGG | + | chr1_2:7243529-7243548 | Msa0052870:intron | 40.0% | |
| TTGCACCTGTTAAGGATCAA+AGG | + | chr1_2:7243537-7243556 | Msa0052870:intron | 40.0% | |
| AACCACCTTTGATCCTTAAC+AGG | - | chr1_2:7243545-7243564 | None:intergenic | 40.0% | |
| GATTATCAGATGTCAGTGAC+AGG | - | chr1_2:7243769-7243788 | None:intergenic | 40.0% | |
| TTTAGAAACGTCTGCTACCT+TGG | - | chr1_2:7243829-7243848 | None:intergenic | 40.0% | |
| AGGTTGAAGGTCTAAATCGA+GGG | - | chr1_2:7243912-7243931 | None:intergenic | 40.0% | |
| AAGGTTGAAGGTCTAAATCG+AGG | - | chr1_2:7243913-7243932 | None:intergenic | 40.0% | |
| CTCTGCTTCAAAAAGGTTGA+AGG | - | chr1_2:7243925-7243944 | None:intergenic | 40.0% | |
| !!! | CTTCAACCTTTTTGAAGCAG+AGG | + | chr1_2:7243923-7243942 | Msa0052870:intron | 40.0% |
| CATCTTAGCCTGAAGCAAAA+AGG | - | chr1_2:7244008-7244027 | None:intergenic | 40.0% | |
| ! | TTTTGCTTCAGGCTAAGATG+AGG | + | chr1_2:7244008-7244027 | Msa0052870:intron | 40.0% |
| GTGACTTCAAGTGGAATATC+TGG | - | chr1_2:7244144-7244163 | None:intergenic | 40.0% | |
| ATCAATGGAGTGACTTCAAG+TGG | - | chr1_2:7244153-7244172 | None:intergenic | 40.0% | |
| ATACCAATTCTTAGCGGCAA+AGG | + | chr1_2:7244345-7244364 | Msa0052870:three_prime_UTR | 40.0% | |
| TTGCTTCATTCAGCGACTGT+CGG | - | chr1_2:7239992-7240011 | None:intergenic | 45.0% | |
| ! | TAGGGAGGCTTGTTTCTCAT+TGG | + | chr1_2:7240553-7240572 | Msa0052870:intron | 45.0% |
| GCCGTTTAGATTCTGTTAGC+AGG | + | chr1_2:7240821-7240840 | Msa0052870:CDS | 45.0% | |
| GATTCTGTTAGCAGGGTTGA+AGG | + | chr1_2:7240829-7240848 | Msa0052870:CDS | 45.0% | |
| CTTGCATTGTTTGGCAATCG+AGG | + | chr1_2:7241111-7241130 | Msa0052870:intron | 45.0% | |
| ! | CTCAGTGGGTTTAAGAGTGT+AGG | - | chr1_2:7241160-7241179 | None:intergenic | 45.0% |
| GTCGAGATATTGTCCGCTTT+GGG | - | chr1_2:7241226-7241245 | None:intergenic | 45.0% | |
| TGTCGAGATATTGTCCGCTT+TGG | - | chr1_2:7241227-7241246 | None:intergenic | 45.0% | |
| CGGACAATATCTCGACAATG+CGG | + | chr1_2:7241230-7241249 | Msa0052870:intron | 45.0% | |
| ATCTCGACAATGCGGTGTAA+TGG | + | chr1_2:7241238-7241257 | Msa0052870:intron | 45.0% | |
| !! | CGGTGTAATGGACTTGAGAT+CGG | + | chr1_2:7241250-7241269 | Msa0052870:intron | 45.0% |
| CACATACAGATACACGACCT+AGG | - | chr1_2:7241297-7241316 | None:intergenic | 45.0% | |
| ! | GGTACTTAGAGCATCCACAA+TGG | + | chr1_2:7241412-7241431 | Msa0052870:intron | 45.0% |
| ACTTGGTCCCACTTGCATAA+AGG | - | chr1_2:7241669-7241688 | None:intergenic | 45.0% | |
| ATCTCTCCTGGGTAACTAAC+GGG | - | chr1_2:7241726-7241745 | None:intergenic | 45.0% | |
| GTTAGTTACCCAGGAGAGAT+AGG | + | chr1_2:7241726-7241745 | Msa0052870:intron | 45.0% | |
| ATAAGGACCCTATCTCTCCT+GGG | - | chr1_2:7241737-7241756 | None:intergenic | 45.0% | |
| TATAAGGACCCTATCTCTCC+TGG | - | chr1_2:7241738-7241757 | None:intergenic | 45.0% | |
| ATAGTTGCCCGTTCCTTATC+AGG | + | chr1_2:7241757-7241776 | Msa0052870:intron | 45.0% | |
| TAGTTGCCCGTTCCTTATCA+GGG | + | chr1_2:7241758-7241777 | Msa0052870:intron | 45.0% | |
| ATGAGTCCCTGATAAGGAAC+GGG | - | chr1_2:7241767-7241786 | None:intergenic | 45.0% | |
| GGAGTGGTCCTTGTTAAGTA+AGG | + | chr1_2:7241819-7241838 | Msa0052870:intron | 45.0% | |
| ATGGGGGTCCTTACTTAACA+AGG | - | chr1_2:7241830-7241849 | None:intergenic | 45.0% | |
| TGTTAAGTAAGGACCCCCAT+TGG | + | chr1_2:7241830-7241849 | Msa0052870:intron | 45.0% | |
| !! | TCTAAGAGCATCTCCAATGG+GGG | - | chr1_2:7241846-7241865 | None:intergenic | 45.0% |
| AGGCAGCACTAAGCATCAAA+TGG | - | chr1_2:7241931-7241950 | None:intergenic | 45.0% | |
| TTGATACGAGAGAAACTGGG+AGG | + | chr1_2:7242006-7242025 | Msa0052870:intron | 45.0% | |
| GAGAGAAACTGGGAGGAATT+TGG | + | chr1_2:7242013-7242032 | Msa0052870:intron | 45.0% | |
| TAAGGGTAGGGATAGGATGT+AGG | + | chr1_2:7242555-7242574 | Msa0052870:intron | 45.0% | |
| !! | AGTTAGCTTGCGGTTCAAGT+AGG | + | chr1_2:7242762-7242781 | Msa0052870:intron | 45.0% |
| GCAGGTGATTATTTGTGCAG+TGG | + | chr1_2:7242823-7242842 | Msa0052870:intron | 45.0% | |
| !! | TGGTCCAGACACTTGTTATG+TGG | + | chr1_2:7242915-7242934 | Msa0052870:CDS | 45.0% |
| GAGACCACATAACAAGTGTC+TGG | - | chr1_2:7242922-7242941 | None:intergenic | 45.0% | |
| TGCAAAGCACAAATCCGTAG+AGG | + | chr1_2:7243015-7243034 | Msa0052870:CDS | 45.0% | |
| ! | TATTGAGGTATCTGGGGGAA+AGG | - | chr1_2:7243128-7243147 | None:intergenic | 45.0% |
| TTACAACCCCAAGTGGGAAA+AGG | + | chr1_2:7243310-7243329 | Msa0052870:intron | 45.0% | |
| CCCAAGTGGGAAAAGGTTAT+AGG | + | chr1_2:7243317-7243336 | Msa0052870:intron | 45.0% | |
| CACCTGTTAAGGATCAAAGG+TGG | + | chr1_2:7243540-7243559 | Msa0052870:intron | 45.0% | |
| TCCAACTAATCAGAAGGCCA+AGG | + | chr1_2:7243809-7243828 | Msa0052870:CDS | 45.0% | |
| ! | ACCTTGGCCTTCTGATTAGT+TGG | - | chr1_2:7243813-7243832 | None:intergenic | 45.0% |
| AAATTTGGAAGAGCGGTGAG+TGG | + | chr1_2:7243846-7243865 | Msa0052870:intron | 45.0% | |
| AAGGAAAAACTTGACCCACC+AGG | - | chr1_2:7244041-7244060 | None:intergenic | 45.0% | |
| TGTCCTTTGCCGCTAAGAAT+TGG | - | chr1_2:7244351-7244370 | None:intergenic | 45.0% | |
| CGGCAAAGGACATAACGATT+TGG | + | chr1_2:7244359-7244378 | Msa0052870:three_prime_UTR | 45.0% | |
| TTCATTCAGCGACTGTCGGT+TGG | - | chr1_2:7239988-7240007 | None:intergenic | 50.0% | |
| GGTCTCCTCGACATCATTAC+TGG | - | chr1_2:7240352-7240371 | None:intergenic | 50.0% | |
| GTAATGATGTCGAGGAGACC+TGG | + | chr1_2:7240352-7240371 | Msa0052870:exon | 50.0% | |
| GCATCAAATGCGGTGCTTTG+TGG | + | chr1_2:7241391-7241410 | Msa0052870:intron | 50.0% | |
| TGTCACGTGGGGTCCATTTA+AGG | - | chr1_2:7241457-7241476 | None:intergenic | 50.0% | |
| CTCCAATGGAGGGTCCTTAA+CGG | + | chr1_2:7241796-7241815 | Msa0052870:intron | 50.0% | |
| TCCAATGGAGGGTCCTTAAC+GGG | + | chr1_2:7241797-7241816 | Msa0052870:intron | 50.0% | |
| AGGAAGATGAAACCGAAGCC+TGG | + | chr1_2:7242953-7242972 | Msa0052870:CDS | 50.0% | |
| GGAAGATGAAACCGAAGCCT+GGG | + | chr1_2:7242954-7242973 | Msa0052870:CDS | 50.0% | |
| GAAGATGAAACCGAAGCCTG+GGG | + | chr1_2:7242955-7242974 | Msa0052870:CDS | 50.0% | |
| ! | TGGTTCTATACCCCAGGCTT+CGG | - | chr1_2:7242968-7242987 | None:intergenic | 50.0% |
| CTACACGCACATTGCCTCTA+CGG | - | chr1_2:7243032-7243051 | None:intergenic | 50.0% | |
| GCTGATACCCTCACCAAATC+AGG | - | chr1_2:7243159-7243178 | None:intergenic | 50.0% | |
| !! | TTGGTGAGGGTATCAGCTGA+TGG | + | chr1_2:7243162-7243181 | Msa0052870:CDS | 50.0% |
| CTTCAGGCTAAGATGAGGAG+TGG | + | chr1_2:7244013-7244032 | Msa0052870:intron | 50.0% | |
| CTAAGATGAGGAGTGGATCC+TGG | + | chr1_2:7244020-7244039 | Msa0052870:CDS | 50.0% | |
| GGTTACTTGTACAGGGGCTC+AGG | + | chr1_2:7240574-7240593 | Msa0052870:CDS | 55.0% | |
| AAACGCGAGGGCTCACACAA+AGG | + | chr1_2:7241200-7241219 | Msa0052870:intron | 55.0% | |
| GCTCACACAAAGGCCCAAAG+CGG | + | chr1_2:7241210-7241229 | Msa0052870:intron | 55.0% | |
| CGTTAAGGACCCTCCATTGG+AGG | - | chr1_2:7241798-7241817 | None:intergenic | 55.0% | |
| CCAATGGAGGGTCCTTAACG+GGG | + | chr1_2:7241798-7241817 | Msa0052870:intron | 55.0% | |
| ACAAGGACCACTCCCCGTTA+AGG | - | chr1_2:7241813-7241832 | None:intergenic | 55.0% | |
| AAATCCACTGGAGTTGGGGG+TGG | + | chr1_2:7242497-7242516 | Msa0052870:intron | 55.0% | |
| AGATGAGGAGTGGATCCTGG+TGG | + | chr1_2:7244023-7244042 | Msa0052870:CDS | 55.0% | |
| GATGAGGAGTGGATCCTGGT+GGG | + | chr1_2:7244024-7244043 | Msa0052870:CDS | 55.0% | |
| GTGGGACCCGTTAGTTACCC+AGG | + | chr1_2:7241717-7241736 | Msa0052870:intron | 60.0% | |
| CCCCGTTAAGGACCCTCCAT+TGG | - | chr1_2:7241801-7241820 | None:intergenic | 60.0% | |
| CACTGGAGTTGGGGGTGGAA+GGG | + | chr1_2:7242502-7242521 | Msa0052870:intron | 60.0% | |
| GGAGGGTCCTTAACGGGGAG+TGG | + | chr1_2:7241803-7241822 | Msa0052870:intron | 65.0% | |
| CCTTCCACCCCCAACTCCAG+TGG | - | chr1_2:7242504-7242523 | None:intergenic | 65.0% | |
| CCACTGGAGTTGGGGGTGGA+AGG | + | chr1_2:7242501-7242520 | Msa0052870:intron | 65.0% | |
| TGGAGTTGGGGGTGGAAGGG+AGG | + | chr1_2:7242505-7242524 | Msa0052870:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 7239969 | 7244531 | 7239969 | ID=Msa0052870;Name=Msa0052870 |
| chr1_2 | mRNA | 7239969 | 7244531 | 7239969 | ID=Msa0052870-mRNA-1;Parent=Msa0052870;Name=Msa0052870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=275|1|1|1|0.83|0.71|7|360|252 |
| chr1_2 | exon | 7239969 | 7240203 | 7239969 | ID=Msa0052870-mRNA-1:exon:2429;Parent=Msa0052870-mRNA-1 |
| chr1_2 | exon | 7240315 | 7240447 | 7240315 | ID=Msa0052870-mRNA-1:exon:2430;Parent=Msa0052870-mRNA-1 |
| chr1_2 | exon | 7240556 | 7240595 | 7240556 | ID=Msa0052870-mRNA-1:exon:2431;Parent=Msa0052870-mRNA-1 |
| chr1_2 | exon | 7240809 | 7240850 | 7240809 | ID=Msa0052870-mRNA-1:exon:2432;Parent=Msa0052870-mRNA-1 |
| chr1_2 | exon | 7242827 | 7243201 | 7242827 | ID=Msa0052870-mRNA-1:exon:2433;Parent=Msa0052870-mRNA-1 |
| chr1_2 | exon | 7243805 | 7243860 | 7243805 | ID=Msa0052870-mRNA-1:exon:2434;Parent=Msa0052870-mRNA-1 |
| chr1_2 | exon | 7244019 | 7244531 | 7244019 | ID=Msa0052870-mRNA-1:exon:2435;Parent=Msa0052870-mRNA-1 |
| chr1_2 | five_prime_UTR | 7239969 | 7240203 | 7239969 | ID=Msa0052870-mRNA-1:five_prime_utr;Parent=Msa0052870-mRNA-1 |
| chr1_2 | five_prime_UTR | 7240315 | 7240354 | 7240315 | ID=Msa0052870-mRNA-1:five_prime_utr;Parent=Msa0052870-mRNA-1 |
| chr1_2 | CDS | 7240355 | 7240447 | 7240355 | ID=Msa0052870-mRNA-1:cds;Parent=Msa0052870-mRNA-1 |
| chr1_2 | CDS | 7240556 | 7240595 | 7240556 | ID=Msa0052870-mRNA-1:cds;Parent=Msa0052870-mRNA-1 |
| chr1_2 | CDS | 7240809 | 7240850 | 7240809 | ID=Msa0052870-mRNA-1:cds;Parent=Msa0052870-mRNA-1 |
| chr1_2 | CDS | 7242827 | 7243201 | 7242827 | ID=Msa0052870-mRNA-1:cds;Parent=Msa0052870-mRNA-1 |
| chr1_2 | CDS | 7243805 | 7243860 | 7243805 | ID=Msa0052870-mRNA-1:cds;Parent=Msa0052870-mRNA-1 |
| chr1_2 | CDS | 7244019 | 7244171 | 7244019 | ID=Msa0052870-mRNA-1:cds;Parent=Msa0052870-mRNA-1 |
| chr1_2 | three_prime_UTR | 7244172 | 7244531 | 7244172 | ID=Msa0052870-mRNA-1:three_prime_utr;Parent=Msa0052870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
