Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337970 | XP_024636611.1 | 81.310 | 519 | 48 | 5 | 1 | 512 | 1 | 477 | 0.0 | 803 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337970 | sp|Q9C9C0|SPPA1_ARATH | 41.144 | 542 | 211 | 11 | 63 | 501 | 78 | 614 | 2.68e-113 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337970 | G7JFI3 | 78.320 | 512 | 50 | 5 | 1 | 512 | 13 | 463 | 0.0 | 754 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1334130 | Msa1337970 | 0.949549 | 1.016181e-107 | -8.615850e-47 |
| Msa1334160 | Msa1337970 | 0.949692 | 7.600642e-108 | -8.615850e-47 |
| Msa1334250 | Msa1337970 | 0.844701 | 6.423498e-59 | -8.615850e-47 |
| Msa1337970 | Msa1406500 | 0.828735 | 7.620775e-55 | -8.615850e-47 |
| Msa1337970 | Msa1416560 | 0.951350 | 2.459688e-109 | -8.615850e-47 |
| Msa1222440 | Msa1337970 | 0.808645 | 2.797506e-50 | -8.615850e-47 |
| Msa1222620 | Msa1337970 | 0.849451 | 3.206825e-60 | -8.615850e-47 |
| Msa1222630 | Msa1337970 | 0.904116 | 1.716610e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337970 | MtrunA17_Chr4g0073611 | 87.636 | 275 | 34 | 0 | 144 | 418 | 1 | 275 | 3.21e-176 | 498 |
| Msa1337970 | MtrunA17_Chr4g0061881 | 48.837 | 602 | 187 | 14 | 13 | 501 | 3 | 596 | 5.43e-164 | 480 |
| Msa1337970 | MtrunA17_Chr2g0307851 | 46.816 | 534 | 173 | 11 | 72 | 501 | 82 | 608 | 1.70e-140 | 421 |
| Msa1337970 | MtrunA17_Chr5g0408331 | 47.006 | 334 | 116 | 10 | 74 | 402 | 35 | 312 | 1.17e-80 | 254 |
| Msa1337970 | MtrunA17_Chr5g0437391 | 43.293 | 328 | 104 | 9 | 189 | 465 | 4 | 300 | 6.45e-62 | 206 |
| Msa1337970 | MtrunA17_Chr4g0061841 | 39.274 | 303 | 72 | 7 | 145 | 415 | 9 | 231 | 4.37e-53 | 180 |
| Msa1337970 | MtrunA17_Chr4g0069071 | 34.118 | 340 | 177 | 10 | 126 | 429 | 5 | 333 | 1.86e-44 | 161 |
| Msa1337970 | MtrunA17_Chr4g0073621 | 91.667 | 72 | 6 | 0 | 441 | 512 | 6 | 77 | 7.91e-41 | 141 |
| Msa1337970 | MtrunA17_Chr4g0076571 | 64.516 | 93 | 32 | 1 | 140 | 232 | 1 | 92 | 4.49e-33 | 121 |
| Msa1337970 | MtrunA17_Chr4g0076561 | 50.694 | 144 | 61 | 4 | 303 | 437 | 2 | 144 | 3.78e-32 | 122 |
| Msa1337970 | MtrunA17_Chr8g0344851 | 46.429 | 168 | 31 | 4 | 384 | 494 | 1 | 166 | 5.79e-31 | 119 |
| Msa1337970 | MtrunA17_Chr5g0437441 | 55.238 | 105 | 40 | 3 | 98 | 198 | 1 | 102 | 9.35e-26 | 101 |
| Msa1337970 | MtrunA17_Chr4g0064001 | 48.592 | 142 | 23 | 4 | 408 | 501 | 3 | 142 | 1.02e-25 | 105 |
| Msa1337970 | MtrunA17_Chr5g0437451 | 40.217 | 184 | 67 | 7 | 313 | 490 | 2 | 148 | 1.48e-23 | 97.1 |
| Msa1337970 | MtrunA17_Chr8g0344831 | 50.435 | 115 | 53 | 2 | 297 | 408 | 8 | 121 | 6.89e-23 | 94.0 |
| Msa1337970 | MtrunA17_Chr5g0408341 | 66.667 | 60 | 18 | 1 | 441 | 500 | 1 | 58 | 1.74e-18 | 82.0 |
| Msa1337970 | MtrunA17_Chr8g0344821 | 74.074 | 54 | 12 | 1 | 441 | 494 | 56 | 107 | 1.06e-17 | 79.0 |
| Msa1337970 | MtrunA17_Chr4g0061831 | 71.698 | 53 | 13 | 1 | 441 | 493 | 66 | 116 | 1.04e-15 | 73.6 |
| Msa1337970 | MtrunA17_Chr4g0063991 | 59.701 | 67 | 23 | 2 | 313 | 376 | 2 | 67 | 1.18e-14 | 69.3 |
| Msa1337970 | MtrunA17_Chr4g0063981 | 71.429 | 35 | 10 | 0 | 174 | 208 | 1 | 35 | 3.54e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337970 | AT1G73990.1 | 41.144 | 542 | 211 | 11 | 63 | 501 | 78 | 614 | 2.72e-114 | 353 |
| Msa1337970 | AT1G73990.2 | 45.662 | 438 | 189 | 8 | 68 | 461 | 84 | 516 | 4.66e-112 | 345 |
Find 125 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACCAGTGTTCAAATTT+TGG | 0.096910 | tig0001530:-72388 | None:intergenic |
| CGAGACAACAACTGCATTAA+TGG | 0.184426 | tig0001530:+72628 | Msa1337970:CDS |
| TTTGCTTATGTCCCTGAAAT+TGG | 0.196065 | tig0001530:+72470 | Msa1337970:CDS |
| TGGATAATATTTACTCAAAT+TGG | 0.197209 | tig0001530:+72648 | Msa1337970:CDS |
| AATTTGGAAGGTAAGATTTC+TGG | 0.242205 | tig0001530:+72077 | Msa1337970:CDS |
| TGGAACCTCTTCCATTGATT+TGG | 0.252339 | tig0001530:-73233 | None:intergenic |
| TTTGTTGAGGTTCATTTGTA+TGG | 0.259020 | tig0001530:+72545 | Msa1337970:CDS |
| AGGAGGAATTTAATCTTCTT+TGG | 0.260660 | tig0001530:+73431 | Msa1337970:CDS |
| CTCGGTTTGGTTGATGCTAT+TGG | 0.265550 | tig0001530:+73298 | Msa1337970:CDS |
| CATAACGGATTTACTGTATA+TGG | 0.271470 | tig0001530:+72781 | Msa1337970:CDS |
| CAGTTCAGGAGGTAAATTTC+GGG | 0.292898 | tig0001530:+73036 | Msa1337970:CDS |
| TGAAGCAATGACGGGTATTT+CGG | 0.318803 | tig0001530:-73098 | None:intergenic |
| TTAGTGCATCCTAATCTTCT+TGG | 0.333889 | tig0001530:+73466 | Msa1337970:CDS |
| ACAGTTCAGGAGGTAAATTT+CGG | 0.345303 | tig0001530:+73035 | Msa1337970:CDS |
| GCAGAAAATCTTACCTTAGT+TGG | 0.347938 | tig0001530:+73181 | Msa1337970:CDS |
| ATCTTAAATTTCAGAAAATC+AGG | 0.347978 | tig0001530:+72437 | Msa1337970:CDS |
| CCAAAATTTGAACACTGGTT+GGG | 0.355126 | tig0001530:+72388 | Msa1337970:CDS |
| ATAGCCATCATTCGAGTCTC+AGG | 0.356408 | tig0001530:+72926 | Msa1337970:CDS |
| CACAGGGGAAGGGGAAGGTT+TGG | 0.359665 | tig0001530:+73254 | Msa1337970:CDS |
| TTATGAAACCCTCTTCTTTG+AGG | 0.367459 | tig0001530:-72763 | None:intergenic |
| AGTTTATTGAGAATATATAT+AGG | 0.377641 | tig0001530:+72969 | Msa1337970:CDS |
| AAGGCCAATATACCTCAAAA+TGG | 0.388556 | tig0001530:+73355 | Msa1337970:CDS |
| CTCTGGCTTGAAGAAGTATC+TGG | 0.400164 | tig0001530:+72175 | Msa1337970:CDS |
| CTCTTCCATTGATTTGGAAA+AGG | 0.400283 | tig0001530:-73227 | None:intergenic |
| ATTGTCCGAATTGACAGTTC+AGG | 0.411636 | tig0001530:+73022 | Msa1337970:CDS |
| CCTACTTGAAGGAAAGGCTT+GGG | 0.430422 | tig0001530:+72816 | Msa1337970:CDS |
| TGGATAATCAACATCCTTGC+CGG | 0.434812 | tig0001530:-72126 | None:intergenic |
| GTTTATTGAGAATATATATA+GGG | 0.435192 | tig0001530:+72970 | Msa1337970:CDS |
| TCCAAAATTTGAACACTGGT+TGG | 0.435258 | tig0001530:+72387 | Msa1337970:CDS |
| GCTCGTGCGGTAGAATTTGA+GGG | 0.437753 | tig0001530:-71982 | None:intergenic |
| CTCCCAGGGTAAAGTTGGAC+AGG | 0.443050 | tig0001530:-73407 | None:intergenic |
| TACCTCCTGAACTGTCAATT+CGG | 0.443292 | tig0001530:-73027 | None:intergenic |
| GTTCTTCAAATCAATTTGTC+CGG | 0.445006 | tig0001530:+72251 | Msa1337970:CDS |
| TCCTCCTCCCAGGGTAAAGT+TGG | 0.446367 | tig0001530:-73412 | None:intergenic |
| GAATTTGAGGGGTTTATGAA+TGG | 0.450237 | tig0001530:-71970 | None:intergenic |
| TACAAATGAACCTCAACAAA+AGG | 0.456509 | tig0001530:-72542 | None:intergenic |
| CAAAATTTGAACACTGGTTG+GGG | 0.459205 | tig0001530:+72389 | Msa1337970:CDS |
| GGAAGAGGTTCCACAGGGGA+AGG | 0.463372 | tig0001530:+73243 | Msa1337970:CDS |
| AAGAGGTTCCACAGGGGAAG+GGG | 0.467563 | tig0001530:+73245 | Msa1337970:CDS |
| AAGTTGTGACCAAGAAGATT+AGG | 0.470444 | tig0001530:-73475 | None:intergenic |
| ATTAAATTCCTCCTCCTCCC+AGG | 0.476401 | tig0001530:-73422 | None:intergenic |
| AGGGGTTTATGAATGGTAGC+AGG | 0.476548 | tig0001530:-71963 | None:intergenic |
| AAGAGAAAATGTCGAAAACT+TGG | 0.476552 | tig0001530:+72703 | Msa1337970:CDS |
| AAGGATGTTGATTATCCAAC+CGG | 0.477750 | tig0001530:+72131 | Msa1337970:CDS |
| TGATATTATCACCTACTTGA+AGG | 0.483027 | tig0001530:+72805 | Msa1337970:CDS |
| CAGAGCATCAACAGAATTCA+AGG | 0.483419 | tig0001530:+72994 | Msa1337970:CDS |
| AACTTTACCCTGGGAGGAGG+AGG | 0.483757 | tig0001530:+73414 | Msa1337970:CDS |
| GCAGGATACTACTTAGCAAC+GGG | 0.485513 | tig0001530:+73142 | Msa1337970:CDS |
| TACTACTTAGCAACGGGAGC+AGG | 0.490304 | tig0001530:+73148 | Msa1337970:CDS |
| GGACGCAACATCTCTCGGTT+TGG | 0.491111 | tig0001530:+73285 | Msa1337970:CDS |
| TTCGGGCATCTAATTATATG+TGG | 0.492637 | tig0001530:+73053 | Msa1337970:CDS |
| TCTGATGTGGCAACAAGTGC+AGG | 0.494828 | tig0001530:+73124 | Msa1337970:CDS |
| AACAAATTATCGCAAATTTG+AGG | 0.494896 | tig0001530:-72320 | None:intergenic |
| CAAAGAAGAGGGTTTCATAA+CGG | 0.495857 | tig0001530:+72766 | Msa1337970:CDS |
| AATCGACTGTTGGAATATCA+AGG | 0.496160 | tig0001530:+72888 | Msa1337970:CDS |
| TATTGCTATAGCAAAATTGA+AGG | 0.500409 | tig0001530:+73336 | Msa1337970:CDS |
| TACCTCTGAATCGGTGTGTA+GGG | 0.501142 | tig0001530:-72288 | None:intergenic |
| CGCGTTAGTAAATCGACTGT+TGG | 0.501184 | tig0001530:+72878 | Msa1337970:CDS |
| ATCAATGGAAGAGGTTCCAC+AGG | 0.501640 | tig0001530:+73237 | Msa1337970:CDS |
| GAAGATTAGGATGCACTAAC+GGG | 0.503183 | tig0001530:-73462 | None:intergenic |
| TAGAGATAATACCTCTGAAT+CGG | 0.505324 | tig0001530:-72297 | None:intergenic |
| ACCTACTTGAAGGAAAGGCT+TGG | 0.508749 | tig0001530:+72815 | Msa1337970:CDS |
| TTTGATTTCATTCCACACTC+TGG | 0.514952 | tig0001530:+72158 | Msa1337970:CDS |
| GAAGAGGTTCCACAGGGGAA+GGG | 0.517831 | tig0001530:+73244 | Msa1337970:CDS |
| TGGAATGAAATCAAAATCTC+CGG | 0.524479 | tig0001530:-72150 | None:intergenic |
| TTATCACCTACTTGAAGGAA+AGG | 0.529131 | tig0001530:+72810 | Msa1337970:CDS |
| AACATCCTTGCCGGAAGAAG+AGG | 0.530642 | tig0001530:-72117 | None:intergenic |
| GGTTCCACAGGGGAAGGGGA+AGG | 0.533194 | tig0001530:+73249 | Msa1337970:CDS |
| ATCAGATATTGAAGCAATGA+CGG | 0.536024 | tig0001530:-73107 | None:intergenic |
| GGTTTGGTTGATGCTATTGG+TGG | 0.540573 | tig0001530:+73301 | Msa1337970:CDS |
| TATTCTTTGAAAGAAACAAA+AGG | 0.543012 | tig0001530:-72851 | None:intergenic |
| AAACTAAATTTGTCAACAGT+GGG | 0.543801 | tig0001530:-72569 | None:intergenic |
| TGGACTAAAAGAACCAACTA+AGG | 0.544447 | tig0001530:-73194 | None:intergenic |
| AGAAGATTAGGATGCACTAA+CGG | 0.547063 | tig0001530:-73463 | None:intergenic |
| AATATCCAAAATTTGAACAC+TGG | 0.547788 | tig0001530:+72383 | Msa1337970:CDS |
| ATACCTCTGAATCGGTGTGT+AGG | 0.552557 | tig0001530:-72289 | None:intergenic |
| CACCCTGTCCAACTTTACCC+TGG | 0.555639 | tig0001530:+73404 | Msa1337970:CDS |
| GTTTGGTTGATGCTATTGGT+GGG | 0.556402 | tig0001530:+73302 | Msa1337970:CDS |
| TTGGTTAACTTCGTAACTGA+AGG | 0.556482 | tig0001530:+72722 | Msa1337970:CDS |
| GGTAAGGACGCAACATCTCT+CGG | 0.557645 | tig0001530:+73280 | Msa1337970:CDS |
| CACCCTACACACCGATTCAG+AGG | 0.558538 | tig0001530:+72286 | Msa1337970:CDS |
| TGAATCGGTGTGTAGGGTGT+CGG | 0.562552 | tig0001530:-72282 | None:intergenic |
| TCCAACTTTACCCTGGGAGG+AGG | 0.565785 | tig0001530:+73411 | Msa1337970:CDS |
| GATGTAGTATCTTCTTCCAC+CGG | 0.568021 | tig0001530:+72674 | Msa1337970:CDS |
| AGTAGAAGACCTCAAAGAAG+AGG | 0.568425 | tig0001530:+72754 | Msa1337970:CDS |
| GTCACAGCGTTCATCTCTCA+TGG | 0.568866 | tig0001530:+71923 | Msa1337970:CDS |
| AGACCCTGAGACTCGAATGA+TGG | 0.571972 | tig0001530:-72930 | None:intergenic |
| AATGAACCTCAACAAAAGGA+TGG | 0.572223 | tig0001530:-72538 | None:intergenic |
| CTCGTGCGGTAGAATTTGAG+GGG | 0.580670 | tig0001530:-71981 | None:intergenic |
| TCAGATATTGAAGCAATGAC+GGG | 0.581772 | tig0001530:-73106 | None:intergenic |
| CTGCTAGCACTCCCCTCAGA+GGG | 0.583729 | tig0001530:+72212 | Msa1337970:CDS |
| ACCCTGTCCAACTTTACCCT+GGG | 0.586996 | tig0001530:+73405 | Msa1337970:CDS |
| AGCAGGTGATATACAGCGAT+CGG | 0.592109 | tig0001530:-71946 | None:intergenic |
| TAGGGTGTCGGATATTATGC+CGG | 0.594782 | tig0001530:-72270 | None:intergenic |
| ATGAAATCAAAATCTCCGGT+TGG | 0.594805 | tig0001530:-72146 | None:intergenic |
| TACTTCTTCAAGCCAGAGTG+TGG | 0.594882 | tig0001530:-72170 | None:intergenic |
| GTAGAAGACCTCAAAGAAGA+GGG | 0.597121 | tig0001530:+72755 | Msa1337970:CDS |
| TTAATGCAGTTGTTGTCTCG+TGG | 0.598388 | tig0001530:-72625 | None:intergenic |
| ATCGACTGTTGGAATATCAA+GGG | 0.598413 | tig0001530:+72889 | Msa1337970:CDS |
| AAAACTAAATTTGTCAACAG+TGG | 0.601150 | tig0001530:-72570 | None:intergenic |
| CATTGCTTCAATATCTGATG+TGG | 0.601190 | tig0001530:+73111 | Msa1337970:CDS |
| TTAAATTCCTCCTCCTCCCA+GGG | 0.602774 | tig0001530:-73421 | None:intergenic |
| ATGAACCTCAACAAAAGGAT+GGG | 0.602807 | tig0001530:-72537 | None:intergenic |
| GGGGAAGGTTTGGACTGGTA+AGG | 0.604771 | tig0001530:+73264 | Msa1337970:CDS |
| TAGCCATCATTCGAGTCTCA+GGG | 0.606571 | tig0001530:+72927 | Msa1337970:CDS |
| CGATCAATAATAGAAGATGA+TGG | 0.608918 | tig0001530:-72020 | None:intergenic |
| TGCAGGATACTACTTAGCAA+CGG | 0.610387 | tig0001530:+73141 | Msa1337970:CDS |
| CGGAAGAAGAGGAAAATAAG+TGG | 0.613550 | tig0001530:-72106 | None:intergenic |
| CCCAAGCCTTTCCTTCAAGT+AGG | 0.616569 | tig0001530:-72816 | None:intergenic |
| ATAATAGAAGATGATGGTGG+CGG | 0.619265 | tig0001530:-72014 | None:intergenic |
| GTAAACTAGATGAAATTCGA+AGG | 0.619983 | tig0001530:+72411 | Msa1337970:CDS |
| GTCCGAATTGACAGTTCAGG+AGG | 0.622572 | tig0001530:+73025 | Msa1337970:CDS |
| CTACTTGAAGGAAAGGCTTG+GGG | 0.625623 | tig0001530:+72817 | Msa1337970:CDS |
| GGGAAGGGGAAGGTTTGGAC+TGG | 0.637451 | tig0001530:+73259 | Msa1337970:CDS |
| CAAACCTTCCCCTTCCCCTG+TGG | 0.650489 | tig0001530:-73253 | None:intergenic |
| TCCCAGGGTAAAGTTGGACA+GGG | 0.651519 | tig0001530:-73406 | None:intergenic |
| ATAAATACGAGGATCATACA+TGG | 0.660349 | tig0001530:-72348 | None:intergenic |
| CAATATACCTCAAAATGGTG+AGG | 0.660377 | tig0001530:+73360 | Msa1337970:CDS |
| TCAATGGAAGAGGTTCCACA+GGG | 0.668896 | tig0001530:+73238 | Msa1337970:CDS |
| TCTGCTAGCACTCCCCTCAG+AGG | 0.672433 | tig0001530:+72211 | Msa1337970:CDS |
| CTGTCCAACTTTACCCTGGG+AGG | 0.673818 | tig0001530:+73408 | Msa1337970:CDS |
| GCGGTGATATTGCGCTCGTG+CGG | 0.694021 | tig0001530:-71995 | None:intergenic |
| TCAATAATAGAAGATGATGG+TGG | 0.696702 | tig0001530:-72017 | None:intergenic |
| AGATATACAGCATAAATACG+AGG | 0.747490 | tig0001530:-72359 | None:intergenic |
| CAATGGAAGAGGTTCCACAG+GGG | 0.794420 | tig0001530:+73239 | Msa1337970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGAATTTTTTGTGAAT+CGG | - | tig0001530:72062-72081 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | + | tig0001530:72577-72596 | Msa1337970:CDS | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | + | tig0001530:72578-72597 | Msa1337970:CDS | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | + | tig0001530:72969-72988 | Msa1337970:CDS | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | + | tig0001530:72970-72989 | Msa1337970:CDS | 15.0% |
| !!! | AAATTGAATTTTTTGTGAAT+CGG | - | tig0001530:72062-72081 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | + | tig0001530:72577-72596 | Msa1337970:CDS | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | + | tig0001530:72578-72597 | Msa1337970:CDS | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | + | tig0001530:72969-72988 | Msa1337970:CDS | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | + | tig0001530:72970-72989 | Msa1337970:CDS | 15.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | + | tig0001530:72061-72080 | Msa1337970:CDS | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | + | tig0001530:72437-72456 | Msa1337970:CDS | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | + | tig0001530:72648-72667 | Msa1337970:CDS | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | - | tig0001530:72854-72873 | None:intergenic | 20.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | + | tig0001530:72061-72080 | Msa1337970:CDS | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | + | tig0001530:72437-72456 | Msa1337970:CDS | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | + | tig0001530:72648-72667 | Msa1337970:CDS | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | - | tig0001530:72854-72873 | None:intergenic | 20.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | + | tig0001530:72065-72084 | Msa1337970:CDS | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | - | tig0001530:72323-72342 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | + | tig0001530:72383-72402 | Msa1337970:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | - | tig0001530:72572-72591 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | - | tig0001530:72573-72592 | None:intergenic | 25.0% |
| !! | TTGGAAAAGGATCTTTTATT+TGG | - | tig0001530:73217-73236 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | + | tig0001530:73336-73355 | Msa1337970:CDS | 25.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | + | tig0001530:72065-72084 | Msa1337970:CDS | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | - | tig0001530:72323-72342 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | + | tig0001530:72383-72402 | Msa1337970:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | - | tig0001530:72572-72591 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | - | tig0001530:72573-72592 | None:intergenic | 25.0% |
| !! | TTGGAAAAGGATCTTTTATT+TGG | - | tig0001530:73217-73236 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | + | tig0001530:73336-73355 | Msa1337970:CDS | 25.0% |
| ! | TCAATAATAGAAGATGATGG+TGG | - | tig0001530:72020-72039 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | - | tig0001530:72023-72042 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | + | tig0001530:72077-72096 | Msa1337970:CDS | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | - | tig0001530:72153-72172 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | + | tig0001530:72251-72270 | Msa1337970:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | - | tig0001530:72300-72319 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | - | tig0001530:72351-72370 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | - | tig0001530:72362-72381 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | + | tig0001530:72411-72430 | Msa1337970:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | - | tig0001530:72484-72503 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | - | tig0001530:72485-72504 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | - | tig0001530:72545-72564 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | + | tig0001530:72545-72564 | Msa1337970:CDS | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | - | tig0001530:72696-72715 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | + | tig0001530:72703-72722 | Msa1337970:CDS | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | + | tig0001530:72781-72800 | Msa1337970:CDS | 30.0% |
| TGATATTATCACCTACTTGA+AGG | + | tig0001530:72805-72824 | Msa1337970:CDS | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | - | tig0001530:73110-73129 | None:intergenic | 30.0% | |
| ! | AAGATCCTTTTCCAAATCAA+TGG | + | tig0001530:73222-73241 | Msa1337970:CDS | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | + | tig0001530:73431-73450 | Msa1337970:CDS | 30.0% | |
| ! | TCAATAATAGAAGATGATGG+TGG | - | tig0001530:72020-72039 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | - | tig0001530:72023-72042 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | + | tig0001530:72077-72096 | Msa1337970:CDS | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | - | tig0001530:72153-72172 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | + | tig0001530:72251-72270 | Msa1337970:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | - | tig0001530:72300-72319 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | - | tig0001530:72351-72370 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | - | tig0001530:72362-72381 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | + | tig0001530:72411-72430 | Msa1337970:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | - | tig0001530:72484-72503 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | - | tig0001530:72485-72504 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | - | tig0001530:72545-72564 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | + | tig0001530:72545-72564 | Msa1337970:CDS | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | - | tig0001530:72696-72715 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | + | tig0001530:72703-72722 | Msa1337970:CDS | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | + | tig0001530:72781-72800 | Msa1337970:CDS | 30.0% |
| TGATATTATCACCTACTTGA+AGG | + | tig0001530:72805-72824 | Msa1337970:CDS | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | - | tig0001530:73110-73129 | None:intergenic | 30.0% | |
| ! | AAGATCCTTTTCCAAATCAA+TGG | + | tig0001530:73222-73241 | Msa1337970:CDS | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | + | tig0001530:73431-73450 | Msa1337970:CDS | 30.0% | |
| GAATTTGAGGGGTTTATGAA+TGG | - | tig0001530:71973-71992 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | - | tig0001530:72017-72036 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | + | tig0001530:72107-72126 | Msa1337970:CDS | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | + | tig0001530:72131-72150 | Msa1337970:CDS | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | - | tig0001530:72149-72168 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | + | tig0001530:72158-72177 | Msa1337970:CDS | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | + | tig0001530:72387-72406 | Msa1337970:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | + | tig0001530:72388-72407 | Msa1337970:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | + | tig0001530:72389-72408 | Msa1337970:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | + | tig0001530:72470-72489 | Msa1337970:CDS | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | - | tig0001530:72540-72559 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | - | tig0001530:72541-72560 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | - | tig0001530:72693-72712 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | + | tig0001530:72722-72741 | Msa1337970:CDS | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | - | tig0001530:72766-72785 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | + | tig0001530:72766-72785 | Msa1337970:CDS | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | + | tig0001530:72810-72829 | Msa1337970:CDS | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | + | tig0001530:72888-72907 | Msa1337970:CDS | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | + | tig0001530:72889-72908 | Msa1337970:CDS | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | + | tig0001530:73035-73054 | Msa1337970:CDS | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | + | tig0001530:73053-73072 | Msa1337970:CDS | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | - | tig0001530:73109-73128 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | + | tig0001530:73111-73130 | Msa1337970:CDS | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | + | tig0001530:73181-73200 | Msa1337970:CDS | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | - | tig0001530:73197-73216 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | - | tig0001530:73230-73249 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | + | tig0001530:73228-73247 | Msa1337970:CDS | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | + | tig0001530:73355-73374 | Msa1337970:CDS | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | - | tig0001530:73362-73381 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | + | tig0001530:73360-73379 | Msa1337970:CDS | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | - | tig0001530:73466-73485 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | + | tig0001530:73466-73485 | Msa1337970:CDS | 35.0% | |
| AAGTTGTGACCAAGAAGATT+AGG | - | tig0001530:73478-73497 | None:intergenic | 35.0% | |
| GAATTTGAGGGGTTTATGAA+TGG | - | tig0001530:71973-71992 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | - | tig0001530:72017-72036 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | + | tig0001530:72107-72126 | Msa1337970:CDS | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | + | tig0001530:72131-72150 | Msa1337970:CDS | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | - | tig0001530:72149-72168 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | + | tig0001530:72158-72177 | Msa1337970:CDS | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | + | tig0001530:72387-72406 | Msa1337970:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | + | tig0001530:72388-72407 | Msa1337970:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | + | tig0001530:72389-72408 | Msa1337970:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | + | tig0001530:72470-72489 | Msa1337970:CDS | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | - | tig0001530:72540-72559 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | - | tig0001530:72541-72560 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | - | tig0001530:72693-72712 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | + | tig0001530:72722-72741 | Msa1337970:CDS | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | - | tig0001530:72766-72785 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | + | tig0001530:72766-72785 | Msa1337970:CDS | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | + | tig0001530:72810-72829 | Msa1337970:CDS | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | + | tig0001530:72888-72907 | Msa1337970:CDS | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | + | tig0001530:72889-72908 | Msa1337970:CDS | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | + | tig0001530:73035-73054 | Msa1337970:CDS | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | + | tig0001530:73053-73072 | Msa1337970:CDS | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | - | tig0001530:73109-73128 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | + | tig0001530:73111-73130 | Msa1337970:CDS | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | + | tig0001530:73181-73200 | Msa1337970:CDS | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | - | tig0001530:73197-73216 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | - | tig0001530:73230-73249 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | + | tig0001530:73228-73247 | Msa1337970:CDS | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | + | tig0001530:73355-73374 | Msa1337970:CDS | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | - | tig0001530:73362-73381 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | + | tig0001530:73360-73379 | Msa1337970:CDS | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | - | tig0001530:73466-73485 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | + | tig0001530:73466-73485 | Msa1337970:CDS | 35.0% | |
| AAGTTGTGACCAAGAAGATT+AGG | - | tig0001530:73478-73497 | None:intergenic | 35.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | - | tig0001530:72109-72128 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | - | tig0001530:72129-72148 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | - | tig0001530:72391-72410 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | + | tig0001530:72532-72551 | Msa1337970:CDS | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | - | tig0001530:72628-72647 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | + | tig0001530:72628-72647 | Msa1337970:CDS | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | + | tig0001530:72674-72693 | Msa1337970:CDS | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | + | tig0001530:72754-72773 | Msa1337970:CDS | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | + | tig0001530:72755-72774 | Msa1337970:CDS | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | + | tig0001530:72994-73013 | Msa1337970:CDS | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | + | tig0001530:73022-73041 | Msa1337970:CDS | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | - | tig0001530:73030-73049 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | + | tig0001530:73036-73055 | Msa1337970:CDS | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | - | tig0001530:73101-73120 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | + | tig0001530:73141-73160 | Msa1337970:CDS | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | - | tig0001530:73236-73255 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | + | tig0001530:73302-73321 | Msa1337970:CDS | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | - | tig0001530:73370-73389 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | - | tig0001530:73465-73484 | None:intergenic | 40.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | - | tig0001530:72109-72128 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | - | tig0001530:72129-72148 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | - | tig0001530:72391-72410 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | + | tig0001530:72532-72551 | Msa1337970:CDS | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | - | tig0001530:72628-72647 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | + | tig0001530:72628-72647 | Msa1337970:CDS | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | + | tig0001530:72674-72693 | Msa1337970:CDS | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | + | tig0001530:72754-72773 | Msa1337970:CDS | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | + | tig0001530:72755-72774 | Msa1337970:CDS | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | + | tig0001530:72994-73013 | Msa1337970:CDS | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | + | tig0001530:73022-73041 | Msa1337970:CDS | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | - | tig0001530:73030-73049 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | + | tig0001530:73036-73055 | Msa1337970:CDS | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | - | tig0001530:73101-73120 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | + | tig0001530:73141-73160 | Msa1337970:CDS | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | - | tig0001530:73236-73255 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | + | tig0001530:73302-73321 | Msa1337970:CDS | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | - | tig0001530:73370-73389 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | - | tig0001530:73465-73484 | None:intergenic | 40.0% | |
| AGCAGGTGATATACAGCGAT+CGG | - | tig0001530:71949-71968 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | - | tig0001530:71966-71985 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | + | tig0001530:72112-72131 | Msa1337970:CDS | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | - | tig0001530:72173-72192 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | + | tig0001530:72175-72194 | Msa1337970:CDS | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | - | tig0001530:72226-72245 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | - | tig0001530:72227-72246 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | + | tig0001530:72224-72243 | Msa1337970:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | - | tig0001530:72273-72292 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | - | tig0001530:72291-72310 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | - | tig0001530:72292-72311 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | + | tig0001530:72815-72834 | Msa1337970:CDS | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | + | tig0001530:72816-72835 | Msa1337970:CDS | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | + | tig0001530:72817-72836 | Msa1337970:CDS | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | + | tig0001530:72878-72897 | Msa1337970:CDS | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | + | tig0001530:72926-72945 | Msa1337970:CDS | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | + | tig0001530:72927-72946 | Msa1337970:CDS | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | + | tig0001530:73142-73161 | Msa1337970:CDS | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | + | tig0001530:73237-73256 | Msa1337970:CDS | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | + | tig0001530:73238-73257 | Msa1337970:CDS | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | + | tig0001530:73298-73317 | Msa1337970:CDS | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | + | tig0001530:73301-73320 | Msa1337970:CDS | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | - | tig0001530:73424-73443 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | - | tig0001530:73425-73444 | None:intergenic | 45.0% | |
| AGCAGGTGATATACAGCGAT+CGG | - | tig0001530:71949-71968 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | - | tig0001530:71966-71985 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | + | tig0001530:72112-72131 | Msa1337970:CDS | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | - | tig0001530:72173-72192 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | + | tig0001530:72175-72194 | Msa1337970:CDS | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | - | tig0001530:72226-72245 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | - | tig0001530:72227-72246 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | + | tig0001530:72224-72243 | Msa1337970:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | - | tig0001530:72273-72292 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | - | tig0001530:72291-72310 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | - | tig0001530:72292-72311 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | + | tig0001530:72815-72834 | Msa1337970:CDS | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | + | tig0001530:72816-72835 | Msa1337970:CDS | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | + | tig0001530:72817-72836 | Msa1337970:CDS | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | + | tig0001530:72878-72897 | Msa1337970:CDS | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | + | tig0001530:72926-72945 | Msa1337970:CDS | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | + | tig0001530:72927-72946 | Msa1337970:CDS | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | + | tig0001530:73142-73161 | Msa1337970:CDS | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | + | tig0001530:73237-73256 | Msa1337970:CDS | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | + | tig0001530:73238-73257 | Msa1337970:CDS | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | + | tig0001530:73298-73317 | Msa1337970:CDS | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | + | tig0001530:73301-73320 | Msa1337970:CDS | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | - | tig0001530:73424-73443 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | - | tig0001530:73425-73444 | None:intergenic | 45.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | + | tig0001530:71923-71942 | Msa1337970:CDS | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | - | tig0001530:71984-72003 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | - | tig0001530:71985-72004 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | - | tig0001530:72120-72139 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | - | tig0001530:72228-72247 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | - | tig0001530:72285-72304 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | - | tig0001530:72819-72838 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | - | tig0001530:72933-72952 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | + | tig0001530:73025-73044 | Msa1337970:CDS | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | + | tig0001530:73124-73143 | Msa1337970:CDS | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | + | tig0001530:73148-73167 | Msa1337970:CDS | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | + | tig0001530:73239-73258 | Msa1337970:CDS | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | + | tig0001530:73280-73299 | Msa1337970:CDS | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | + | tig0001530:73405-73424 | Msa1337970:CDS | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | - | tig0001530:73409-73428 | None:intergenic | 50.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | + | tig0001530:71923-71942 | Msa1337970:CDS | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | - | tig0001530:71984-72003 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | - | tig0001530:71985-72004 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | - | tig0001530:72120-72139 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | - | tig0001530:72228-72247 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | - | tig0001530:72285-72304 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | - | tig0001530:72819-72838 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | - | tig0001530:72933-72952 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | + | tig0001530:73025-73044 | Msa1337970:CDS | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | + | tig0001530:73124-73143 | Msa1337970:CDS | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | + | tig0001530:73148-73167 | Msa1337970:CDS | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | + | tig0001530:73239-73258 | Msa1337970:CDS | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | + | tig0001530:73280-73299 | Msa1337970:CDS | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | + | tig0001530:73405-73424 | Msa1337970:CDS | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | - | tig0001530:73409-73428 | None:intergenic | 50.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | - | tig0001530:71986-72005 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | + | tig0001530:72286-72305 | Msa1337970:CDS | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | + | tig0001530:73244-73263 | Msa1337970:CDS | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | + | tig0001530:73245-73264 | Msa1337970:CDS | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | + | tig0001530:73264-73283 | Msa1337970:CDS | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | + | tig0001530:73285-73304 | Msa1337970:CDS | 55.0% | |
| CACCCTGTCCAACTTTACCC+TGG | + | tig0001530:73404-73423 | Msa1337970:CDS | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | - | tig0001530:73410-73429 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | + | tig0001530:73408-73427 | Msa1337970:CDS | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | + | tig0001530:73411-73430 | Msa1337970:CDS | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | - | tig0001530:73415-73434 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | + | tig0001530:73414-73433 | Msa1337970:CDS | 55.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | - | tig0001530:71986-72005 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | + | tig0001530:72286-72305 | Msa1337970:CDS | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | + | tig0001530:73244-73263 | Msa1337970:CDS | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | + | tig0001530:73245-73264 | Msa1337970:CDS | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | + | tig0001530:73264-73283 | Msa1337970:CDS | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | + | tig0001530:73285-73304 | Msa1337970:CDS | 55.0% | |
| CACCCTGTCCAACTTTACCC+TGG | + | tig0001530:73404-73423 | Msa1337970:CDS | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | - | tig0001530:73410-73429 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | + | tig0001530:73408-73427 | Msa1337970:CDS | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | + | tig0001530:73411-73430 | Msa1337970:CDS | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | - | tig0001530:73415-73434 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | + | tig0001530:73414-73433 | Msa1337970:CDS | 55.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | - | tig0001530:71998-72017 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | + | tig0001530:72211-72230 | Msa1337970:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | + | tig0001530:72212-72231 | Msa1337970:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | + | tig0001530:73243-73262 | Msa1337970:CDS | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | - | tig0001530:73256-73275 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | + | tig0001530:73254-73273 | Msa1337970:CDS | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | + | tig0001530:73259-73278 | Msa1337970:CDS | 60.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | - | tig0001530:71998-72017 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | + | tig0001530:72211-72230 | Msa1337970:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | + | tig0001530:72212-72231 | Msa1337970:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | + | tig0001530:73243-73262 | Msa1337970:CDS | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | - | tig0001530:73256-73275 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | + | tig0001530:73254-73273 | Msa1337970:CDS | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | + | tig0001530:73259-73278 | Msa1337970:CDS | 60.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | + | tig0001530:73249-73268 | Msa1337970:CDS | 65.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | + | tig0001530:73249-73268 | Msa1337970:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0001530 | gene | 71921 | 73516 | 71921 | ID=Msa1337970;Name=Msa1337970 |
| tig0001530 | mRNA | 71921 | 73516 | 71921 | ID=Msa1337970-mRNA-1;Parent=Msa1337970;Name=Msa1337970-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|531 |
| tig0001530 | exon | 71921 | 73516 | 71921 | ID=Msa1337970-mRNA-1:exon:1403;Parent=Msa1337970-mRNA-1 |
| tig0001530 | CDS | 71921 | 73516 | 71921 | ID=Msa1337970-mRNA-1:cds;Parent=Msa1337970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
