Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334160 | XP_024636611.1 | 81.888 | 519 | 45 | 5 | 1 | 512 | 1 | 477 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334160 | sp|Q9C9C0|SPPA1_ARATH | 41.418 | 536 | 207 | 10 | 68 | 501 | 84 | 614 | 7.98e-113 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334160 | G7JFI3 | 78.125 | 512 | 51 | 4 | 1 | 512 | 13 | 463 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1334130 | Msa1334160 | 0.997137 | 1.788873e-237 | -8.615850e-47 |
| Msa1334140 | Msa1334160 | 0.815046 | 1.129752e-51 | -8.615850e-47 |
| Msa1334160 | Msa1334180 | 0.821807 | 3.317724e-53 | -8.615850e-47 |
| Msa1334160 | Msa1334190 | 0.805290 | 1.433905e-49 | -8.615850e-47 |
| Msa1334160 | Msa1334250 | 0.896381 | 3.896572e-76 | -8.615850e-47 |
| Msa1334160 | Msa1337970 | 0.949692 | 7.600642e-108 | -8.615850e-47 |
| Msa1334160 | Msa1406500 | 0.830956 | 2.192610e-55 | -8.615850e-47 |
| Msa1334160 | Msa1416540 | 0.818192 | 2.227818e-52 | -8.615850e-47 |
| Msa1334160 | Msa1416560 | 0.995627 | 3.381295e-218 | -8.615850e-47 |
| Msa1334160 | Msa1416590 | 0.803863 | 2.845281e-49 | -8.615850e-47 |
| Msa1222440 | Msa1334160 | 0.855117 | 7.822280e-62 | -8.615850e-47 |
| Msa1222500 | Msa1334160 | 0.828604 | 8.199596e-55 | -8.615850e-47 |
| Msa1222620 | Msa1334160 | 0.892753 | 1.186772e-74 | -8.615850e-47 |
| Msa1222630 | Msa1334160 | 0.891302 | 4.495859e-74 | -8.615850e-47 |
| Msa1222640 | Msa1334160 | 0.819096 | 1.389818e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334160 | MtrunA17_Chr4g0073611 | 88.000 | 275 | 33 | 0 | 144 | 418 | 1 | 275 | 1.26e-177 | 501 |
| Msa1334160 | MtrunA17_Chr4g0061881 | 48.671 | 602 | 188 | 14 | 13 | 501 | 3 | 596 | 3.63e-162 | 476 |
| Msa1334160 | MtrunA17_Chr2g0307851 | 46.816 | 534 | 173 | 11 | 72 | 501 | 82 | 608 | 2.01e-139 | 418 |
| Msa1334160 | MtrunA17_Chr5g0408331 | 47.006 | 334 | 116 | 10 | 74 | 402 | 35 | 312 | 3.48e-80 | 253 |
| Msa1334160 | MtrunA17_Chr5g0437391 | 43.902 | 328 | 102 | 12 | 189 | 465 | 4 | 300 | 6.72e-62 | 206 |
| Msa1334160 | MtrunA17_Chr4g0061841 | 39.274 | 303 | 72 | 7 | 145 | 415 | 9 | 231 | 8.94e-53 | 179 |
| Msa1334160 | MtrunA17_Chr4g0069071 | 34.118 | 340 | 177 | 10 | 126 | 429 | 5 | 333 | 5.18e-44 | 159 |
| Msa1334160 | MtrunA17_Chr4g0073621 | 93.056 | 72 | 5 | 0 | 441 | 512 | 6 | 77 | 1.47e-41 | 143 |
| Msa1334160 | MtrunA17_Chr4g0076571 | 64.516 | 93 | 32 | 1 | 140 | 232 | 1 | 92 | 4.31e-33 | 121 |
| Msa1334160 | MtrunA17_Chr4g0076561 | 51.389 | 144 | 60 | 4 | 303 | 437 | 2 | 144 | 4.10e-32 | 122 |
| Msa1334160 | MtrunA17_Chr8g0344851 | 47.024 | 168 | 30 | 4 | 384 | 494 | 1 | 166 | 8.04e-32 | 121 |
| Msa1334160 | MtrunA17_Chr4g0064001 | 45.732 | 164 | 35 | 5 | 408 | 523 | 3 | 160 | 1.92e-26 | 107 |
| Msa1334160 | MtrunA17_Chr5g0437441 | 55.238 | 105 | 40 | 3 | 98 | 198 | 1 | 102 | 1.10e-25 | 101 |
| Msa1334160 | MtrunA17_Chr5g0437451 | 40.761 | 184 | 66 | 8 | 313 | 490 | 2 | 148 | 2.21e-23 | 96.7 |
| Msa1334160 | MtrunA17_Chr8g0344831 | 50.435 | 115 | 53 | 2 | 297 | 408 | 8 | 121 | 7.64e-23 | 94.0 |
| Msa1334160 | MtrunA17_Chr5g0408341 | 66.667 | 60 | 18 | 1 | 441 | 500 | 1 | 58 | 4.07e-18 | 81.3 |
| Msa1334160 | MtrunA17_Chr8g0344821 | 74.074 | 54 | 12 | 1 | 441 | 494 | 56 | 107 | 1.15e-17 | 79.0 |
| Msa1334160 | MtrunA17_Chr4g0061831 | 71.698 | 53 | 13 | 1 | 441 | 493 | 66 | 116 | 1.04e-15 | 73.6 |
| Msa1334160 | MtrunA17_Chr4g0063991 | 59.701 | 67 | 23 | 2 | 313 | 376 | 2 | 67 | 1.26e-14 | 69.3 |
| Msa1334160 | MtrunA17_Chr4g0063981 | 71.429 | 35 | 10 | 0 | 174 | 208 | 1 | 35 | 3.53e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334160 | AT1G73990.1 | 41.418 | 536 | 207 | 10 | 68 | 501 | 84 | 614 | 8.11e-114 | 352 |
| Msa1334160 | AT1G73990.2 | 45.890 | 438 | 188 | 8 | 68 | 461 | 84 | 516 | 7.64e-112 | 345 |
Find 127 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACCAGTGTTCAAATTT+TGG | 0.096910 | 8_4:+54473756 | None:intergenic |
| TTGGAAAAGGATCTATTATT+TGG | 0.128131 | 8_4:+54472930 | None:intergenic |
| CGAGACAACAACTGCATTAA+TGG | 0.184426 | 8_4:-54473516 | Msa1334160:CDS |
| TTTGCTTATGTCCCTGAAAT+TGG | 0.196065 | 8_4:-54473674 | Msa1334160:CDS |
| TGGATAATATTTACTCAAAT+TGG | 0.197209 | 8_4:-54473496 | Msa1334160:CDS |
| AATTTGGAAGGTAAGATTTC+TGG | 0.242205 | 8_4:-54474067 | Msa1334160:CDS |
| TGGAACCTCTTCCATTGATT+TGG | 0.252339 | 8_4:+54472911 | None:intergenic |
| TTTGTTGAGGTTCATTTGTA+TGG | 0.259020 | 8_4:-54473599 | Msa1334160:CDS |
| AGGAGGAATTTAATCTTCTT+TGG | 0.260660 | 8_4:-54472713 | Msa1334160:CDS |
| CTCGGTTTGGTTGATGCTAT+TGG | 0.265550 | 8_4:-54472846 | Msa1334160:CDS |
| CATAACGGATTTACTGTATA+TGG | 0.271470 | 8_4:-54473363 | Msa1334160:CDS |
| CAGTTCAGGAGGTAAATTTC+GGG | 0.292898 | 8_4:-54473108 | Msa1334160:CDS |
| TGAAGCAATGACGGGTATTT+CGG | 0.318803 | 8_4:+54473046 | None:intergenic |
| TTAGTGCATCCTAATCTTCT+TGG | 0.333889 | 8_4:-54472681 | Msa1334160:CDS |
| ACAGTTCAGGAGGTAAATTT+CGG | 0.345303 | 8_4:-54473109 | Msa1334160:CDS |
| GCAGAAAATCTTACCTTAGT+TGG | 0.347938 | 8_4:-54472963 | Msa1334160:CDS |
| ATCTTAAATTTCAGAAAATC+AGG | 0.347978 | 8_4:-54473707 | Msa1334160:CDS |
| CCAAAATTTGAACACTGGTT+GGG | 0.355126 | 8_4:-54473756 | Msa1334160:CDS |
| ATAGCCATCATTCGAGTCTC+AGG | 0.356408 | 8_4:-54473218 | Msa1334160:CDS |
| CACAGGGGAAGGGGAAGGTT+TGG | 0.359665 | 8_4:-54472890 | Msa1334160:CDS |
| TTATGAAACCCTCTTCTTTG+AGG | 0.367459 | 8_4:+54473381 | None:intergenic |
| AGTTTATTGAGAATATATAT+AGG | 0.377641 | 8_4:-54473175 | Msa1334160:CDS |
| AAGGCCAATATACCTCAAAA+TGG | 0.388556 | 8_4:-54472789 | Msa1334160:CDS |
| CTCTGGCTTGAAGAAGTATC+TGG | 0.400164 | 8_4:-54473969 | Msa1334160:CDS |
| CTCTTCCATTGATTTGGAAA+AGG | 0.400283 | 8_4:+54472917 | None:intergenic |
| ATTGTCCGAATTGACAGTTC+AGG | 0.411636 | 8_4:-54473122 | Msa1334160:CDS |
| CCTACTTGAAGGAAAGGCTT+GGG | 0.430422 | 8_4:-54473328 | Msa1334160:CDS |
| TGGATAATCAACATCCTTGC+CGG | 0.434812 | 8_4:+54474018 | None:intergenic |
| GTTTATTGAGAATATATATA+GGG | 0.435192 | 8_4:-54473174 | Msa1334160:CDS |
| TCCAAAATTTGAACACTGGT+TGG | 0.435258 | 8_4:-54473757 | Msa1334160:CDS |
| GCTCGTGCGGTAGAATTTGA+GGG | 0.437753 | 8_4:+54474162 | None:intergenic |
| TACCTCCTGAACTGTCAATT+CGG | 0.443292 | 8_4:+54473117 | None:intergenic |
| GTTCTTCAAATCAATTTGTC+CGG | 0.445006 | 8_4:-54473893 | Msa1334160:CDS |
| TCCTCCTCCCAGGGTAAAGT+TGG | 0.446367 | 8_4:+54472732 | None:intergenic |
| GAATTTGAGGGGTTTATGAA+TGG | 0.450237 | 8_4:+54474174 | None:intergenic |
| CTCCCAGGGTAAAGTTGGAC+AGG | 0.450486 | 8_4:+54472737 | None:intergenic |
| TACAAATGAACCTCAACAAA+AGG | 0.456509 | 8_4:+54473602 | None:intergenic |
| CAAAATTTGAACACTGGTTG+GGG | 0.459205 | 8_4:-54473755 | Msa1334160:CDS |
| GGAAGAGGTTCCACAGGGGA+AGG | 0.463372 | 8_4:-54472901 | Msa1334160:CDS |
| AAGAGGTTCCACAGGGGAAG+GGG | 0.467563 | 8_4:-54472899 | Msa1334160:CDS |
| ATTAAATTCCTCCTCCTCCC+AGG | 0.476401 | 8_4:+54472722 | None:intergenic |
| AGGGGTTTATGAATGGTAGC+AGG | 0.476548 | 8_4:+54474181 | None:intergenic |
| AAGAGAAAATGTCGAAAACT+TGG | 0.476552 | 8_4:-54473441 | Msa1334160:CDS |
| AAGGATGTTGATTATCCAAC+CGG | 0.477750 | 8_4:-54474013 | Msa1334160:CDS |
| TGATATTATCACCTACTTGA+AGG | 0.483027 | 8_4:-54473339 | Msa1334160:CDS |
| CAGAGCATCAACAGAATTCA+AGG | 0.483419 | 8_4:-54473150 | Msa1334160:CDS |
| AACTTTACCCTGGGAGGAGG+AGG | 0.483757 | 8_4:-54472730 | Msa1334160:CDS |
| GCAGGATACTACTTAGCAAC+GGG | 0.485513 | 8_4:-54473002 | Msa1334160:CDS |
| GAGTTGTGACCAAGAAGATT+AGG | 0.486888 | 8_4:+54472672 | None:intergenic |
| TACTACTTAGCAACGGGAGC+AGG | 0.490304 | 8_4:-54472996 | Msa1334160:CDS |
| GGACGCAACATCTCTCGGTT+TGG | 0.491111 | 8_4:-54472859 | Msa1334160:CDS |
| CGTTACTGCATTATTCGTAA+AGG | 0.491356 | 8_4:-54472650 | None:intergenic |
| TTCGGGCATCTAATTATATG+TGG | 0.492637 | 8_4:-54473091 | Msa1334160:CDS |
| TCTGATGTGGCAACAAGTGC+AGG | 0.494828 | 8_4:-54473020 | Msa1334160:CDS |
| AACAAATTATCGCAAATTTG+AGG | 0.494896 | 8_4:+54473824 | None:intergenic |
| CAAAGAAGAGGGTTTCATAA+CGG | 0.495857 | 8_4:-54473378 | Msa1334160:CDS |
| AATCGACTGTTGGAATATCA+AGG | 0.496160 | 8_4:-54473256 | Msa1334160:CDS |
| TATTGCTATAGCAAAATTGA+AGG | 0.500409 | 8_4:-54472808 | Msa1334160:CDS |
| TACCTCTGAATCGGTGTGTA+GGG | 0.501142 | 8_4:+54473856 | None:intergenic |
| CGCGTTAGTAAATCGACTGT+TGG | 0.501184 | 8_4:-54473266 | Msa1334160:CDS |
| ATCAATGGAAGAGGTTCCAC+AGG | 0.501640 | 8_4:-54472907 | Msa1334160:CDS |
| TAGAGATAATACCTCTGAAT+CGG | 0.505324 | 8_4:+54473847 | None:intergenic |
| GAAGATTAGGATGCACTAAC+GGG | 0.506538 | 8_4:+54472685 | None:intergenic |
| ACCTACTTGAAGGAAAGGCT+TGG | 0.508749 | 8_4:-54473329 | Msa1334160:CDS |
| TTTGATTTCATTCCACACTC+TGG | 0.514952 | 8_4:-54473986 | Msa1334160:CDS |
| GAAGAGGTTCCACAGGGGAA+GGG | 0.517831 | 8_4:-54472900 | Msa1334160:CDS |
| TGGAATGAAATCAAAATCTC+CGG | 0.524479 | 8_4:+54473994 | None:intergenic |
| TTATCACCTACTTGAAGGAA+AGG | 0.529131 | 8_4:-54473334 | Msa1334160:CDS |
| AACATCCTTGCCGGAAGAAG+AGG | 0.530642 | 8_4:+54474027 | None:intergenic |
| GGTTCCACAGGGGAAGGGGA+AGG | 0.533194 | 8_4:-54472895 | Msa1334160:CDS |
| ATCAGATATTGAAGCAATGA+CGG | 0.536024 | 8_4:+54473037 | None:intergenic |
| GGTTTGGTTGATGCTATTGG+TGG | 0.540573 | 8_4:-54472843 | Msa1334160:CDS |
| TATTCTTTGAAAGAAACAAA+AGG | 0.543012 | 8_4:+54473293 | None:intergenic |
| AAACTAAATTTGTCAACAGT+GGG | 0.543801 | 8_4:+54473575 | None:intergenic |
| TGGACTAAAAGAACCAACTA+AGG | 0.544447 | 8_4:+54472950 | None:intergenic |
| AGAAGATTAGGATGCACTAA+CGG | 0.547063 | 8_4:+54472684 | None:intergenic |
| AATATCCAAAATTTGAACAC+TGG | 0.547788 | 8_4:-54473761 | Msa1334160:CDS |
| ATACCTCTGAATCGGTGTGT+AGG | 0.552557 | 8_4:+54473855 | None:intergenic |
| GTTTGGTTGATGCTATTGGT+GGG | 0.556402 | 8_4:-54472842 | Msa1334160:CDS |
| TTGGTTAACTTCGTAACTGA+AGG | 0.556482 | 8_4:-54473422 | Msa1334160:CDS |
| GGTAAGGACGCAACATCTCT+CGG | 0.557645 | 8_4:-54472864 | Msa1334160:CDS |
| CACCCTACACACCGATTCAG+AGG | 0.558538 | 8_4:-54473858 | Msa1334160:CDS |
| TACCCTGTCCAACTTTACCC+TGG | 0.561366 | 8_4:-54472740 | Msa1334160:CDS |
| TGAATCGGTGTGTAGGGTGT+CGG | 0.562552 | 8_4:+54473862 | None:intergenic |
| TCCAACTTTACCCTGGGAGG+AGG | 0.565785 | 8_4:-54472733 | Msa1334160:CDS |
| GATGTAGTATCTTCTTCCAC+CGG | 0.568021 | 8_4:-54473470 | Msa1334160:CDS |
| AGTAGAAGACCTCAAAGAAG+AGG | 0.568425 | 8_4:-54473390 | Msa1334160:CDS |
| GTCACAGCGTTCATCTCTCA+TGG | 0.568866 | 8_4:-54474221 | Msa1334160:CDS |
| AGACCCTGAGACTCGAATGA+TGG | 0.571972 | 8_4:+54473214 | None:intergenic |
| AATGAACCTCAACAAAAGGA+TGG | 0.572223 | 8_4:+54473606 | None:intergenic |
| CTCGTGCGGTAGAATTTGAG+GGG | 0.580670 | 8_4:+54474163 | None:intergenic |
| TCAGATATTGAAGCAATGAC+GGG | 0.581772 | 8_4:+54473038 | None:intergenic |
| CTGCTAGCACTCCCCTCAGA+GGG | 0.583729 | 8_4:-54473932 | Msa1334160:CDS |
| ACCCTGTCCAACTTTACCCT+GGG | 0.586996 | 8_4:-54472739 | Msa1334160:CDS |
| AGCAGGTGATATACAGCGAT+CGG | 0.592109 | 8_4:+54474198 | None:intergenic |
| TAGGGTGTCGGATATTATGC+CGG | 0.594782 | 8_4:+54473874 | None:intergenic |
| ATGAAATCAAAATCTCCGGT+TGG | 0.594805 | 8_4:+54473998 | None:intergenic |
| TACTTCTTCAAGCCAGAGTG+TGG | 0.594882 | 8_4:+54473974 | None:intergenic |
| GTAGAAGACCTCAAAGAAGA+GGG | 0.597121 | 8_4:-54473389 | Msa1334160:CDS |
| TTAATGCAGTTGTTGTCTCG+TGG | 0.598388 | 8_4:+54473519 | None:intergenic |
| ATCGACTGTTGGAATATCAA+GGG | 0.598413 | 8_4:-54473255 | Msa1334160:CDS |
| AAAACTAAATTTGTCAACAG+TGG | 0.601150 | 8_4:+54473574 | None:intergenic |
| CATTGCTTCAATATCTGATG+TGG | 0.601190 | 8_4:-54473033 | Msa1334160:CDS |
| TTAAATTCCTCCTCCTCCCA+GGG | 0.602774 | 8_4:+54472723 | None:intergenic |
| ATGAACCTCAACAAAAGGAT+GGG | 0.602807 | 8_4:+54473607 | None:intergenic |
| GGGGAAGGTTTGGACTGGTA+AGG | 0.604771 | 8_4:-54472880 | Msa1334160:CDS |
| TAGCCATCATTCGAGTCTCA+GGG | 0.606571 | 8_4:-54473217 | Msa1334160:CDS |
| CGATCAATAATAGAAGATGA+TGG | 0.608918 | 8_4:+54474124 | None:intergenic |
| TGCAGGATACTACTTAGCAA+CGG | 0.610387 | 8_4:-54473003 | Msa1334160:CDS |
| CGGAAGAAGAGGAAAATAAG+TGG | 0.613550 | 8_4:+54474038 | None:intergenic |
| CCCAAGCCTTTCCTTCAAGT+AGG | 0.616569 | 8_4:+54473328 | None:intergenic |
| ATAATAGAAGATGATGGTGG+CGG | 0.619265 | 8_4:+54474130 | None:intergenic |
| GTAAACTAGATGAAATTCGA+AGG | 0.619983 | 8_4:-54473733 | Msa1334160:CDS |
| GTCCGAATTGACAGTTCAGG+AGG | 0.622572 | 8_4:-54473119 | Msa1334160:CDS |
| CTACTTGAAGGAAAGGCTTG+GGG | 0.625623 | 8_4:-54473327 | Msa1334160:CDS |
| GGGAAGGGGAAGGTTTGGAC+TGG | 0.637451 | 8_4:-54472885 | Msa1334160:CDS |
| CAAACCTTCCCCTTCCCCTG+TGG | 0.650489 | 8_4:+54472891 | None:intergenic |
| TCCCAGGGTAAAGTTGGACA+GGG | 0.658955 | 8_4:+54472738 | None:intergenic |
| ATAAATACGAGGATCATACA+TGG | 0.660349 | 8_4:+54473796 | None:intergenic |
| CAATATACCTCAAAATGGTG+AGG | 0.660377 | 8_4:-54472784 | Msa1334160:CDS |
| CTGTCCAACTTTACCCTGGG+AGG | 0.667967 | 8_4:-54472736 | Msa1334160:CDS |
| TCAATGGAAGAGGTTCCACA+GGG | 0.668896 | 8_4:-54472906 | Msa1334160:CDS |
| TCTGCTAGCACTCCCCTCAG+AGG | 0.672433 | 8_4:-54473933 | Msa1334160:CDS |
| GCGGTGATATTGCGCTCGTG+CGG | 0.694021 | 8_4:+54474149 | None:intergenic |
| TCAATAATAGAAGATGATGG+TGG | 0.696702 | 8_4:+54474127 | None:intergenic |
| AGATATACAGCATAAATACG+AGG | 0.747490 | 8_4:+54473785 | None:intergenic |
| CAATGGAAGAGGTTCCACAG+GGG | 0.794420 | 8_4:-54472905 | Msa1334160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGAATTTTTTGTGAAT+CGG | + | chr8_4:54472794-54472813 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | - | chr8_4:54473309-54473328 | Msa1334160:CDS | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | - | chr8_4:54473310-54473329 | Msa1334160:CDS | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | - | chr8_4:54473701-54473720 | Msa1334160:CDS | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | - | chr8_4:54473702-54473721 | Msa1334160:CDS | 15.0% |
| !!! | AAATTGAATTTTTTGTGAAT+CGG | + | chr8_4:54472794-54472813 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | - | chr8_4:54473309-54473328 | Msa1334160:CDS | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | - | chr8_4:54473310-54473329 | Msa1334160:CDS | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | - | chr8_4:54473701-54473720 | Msa1334160:CDS | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | - | chr8_4:54473702-54473721 | Msa1334160:CDS | 15.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | - | chr8_4:54472793-54472812 | Msa1334160:CDS | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | - | chr8_4:54473169-54473188 | Msa1334160:CDS | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | - | chr8_4:54473380-54473399 | Msa1334160:CDS | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | + | chr8_4:54473586-54473605 | None:intergenic | 20.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | - | chr8_4:54472793-54472812 | Msa1334160:CDS | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | - | chr8_4:54473169-54473188 | Msa1334160:CDS | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | - | chr8_4:54473380-54473399 | Msa1334160:CDS | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | + | chr8_4:54473586-54473605 | None:intergenic | 20.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | - | chr8_4:54472797-54472816 | Msa1334160:CDS | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | + | chr8_4:54473055-54473074 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | - | chr8_4:54473115-54473134 | Msa1334160:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | + | chr8_4:54473304-54473323 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | + | chr8_4:54473305-54473324 | None:intergenic | 25.0% |
| ! | TTGGAAAAGGATCTATTATT+TGG | + | chr8_4:54473949-54473968 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | - | chr8_4:54474068-54474087 | Msa1334160:CDS | 25.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | - | chr8_4:54472797-54472816 | Msa1334160:CDS | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | + | chr8_4:54473055-54473074 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | - | chr8_4:54473115-54473134 | Msa1334160:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | + | chr8_4:54473304-54473323 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | + | chr8_4:54473305-54473324 | None:intergenic | 25.0% |
| ! | TTGGAAAAGGATCTATTATT+TGG | + | chr8_4:54473949-54473968 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | - | chr8_4:54474068-54474087 | Msa1334160:CDS | 25.0% |
| ! | TCAATAATAGAAGATGATGG+TGG | + | chr8_4:54472752-54472771 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | + | chr8_4:54472755-54472774 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | - | chr8_4:54472809-54472828 | Msa1334160:CDS | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | + | chr8_4:54472885-54472904 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | - | chr8_4:54472983-54473002 | Msa1334160:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | + | chr8_4:54473032-54473051 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | + | chr8_4:54473083-54473102 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | + | chr8_4:54473094-54473113 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | - | chr8_4:54473143-54473162 | Msa1334160:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | + | chr8_4:54473216-54473235 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | + | chr8_4:54473217-54473236 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | + | chr8_4:54473277-54473296 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | - | chr8_4:54473277-54473296 | Msa1334160:CDS | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | + | chr8_4:54473428-54473447 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | - | chr8_4:54473435-54473454 | Msa1334160:CDS | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | - | chr8_4:54473513-54473532 | Msa1334160:CDS | 30.0% |
| TGATATTATCACCTACTTGA+AGG | - | chr8_4:54473537-54473556 | Msa1334160:CDS | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | + | chr8_4:54473842-54473861 | None:intergenic | 30.0% | |
| ! | TAGATCCTTTTCCAAATCAA+TGG | - | chr8_4:54473954-54473973 | Msa1334160:CDS | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | - | chr8_4:54474163-54474182 | Msa1334160:CDS | 30.0% | |
| ! | TCAATAATAGAAGATGATGG+TGG | + | chr8_4:54472752-54472771 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | + | chr8_4:54472755-54472774 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | - | chr8_4:54472809-54472828 | Msa1334160:CDS | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | + | chr8_4:54472885-54472904 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | - | chr8_4:54472983-54473002 | Msa1334160:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | + | chr8_4:54473032-54473051 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | + | chr8_4:54473083-54473102 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | + | chr8_4:54473094-54473113 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | - | chr8_4:54473143-54473162 | Msa1334160:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | + | chr8_4:54473216-54473235 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | + | chr8_4:54473217-54473236 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | + | chr8_4:54473277-54473296 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | - | chr8_4:54473277-54473296 | Msa1334160:CDS | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | + | chr8_4:54473428-54473447 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | - | chr8_4:54473435-54473454 | Msa1334160:CDS | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | - | chr8_4:54473513-54473532 | Msa1334160:CDS | 30.0% |
| TGATATTATCACCTACTTGA+AGG | - | chr8_4:54473537-54473556 | Msa1334160:CDS | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | + | chr8_4:54473842-54473861 | None:intergenic | 30.0% | |
| ! | TAGATCCTTTTCCAAATCAA+TGG | - | chr8_4:54473954-54473973 | Msa1334160:CDS | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | - | chr8_4:54474163-54474182 | Msa1334160:CDS | 30.0% | |
| GAATTTGAGGGGTTTATGAA+TGG | + | chr8_4:54472705-54472724 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | + | chr8_4:54472749-54472768 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | - | chr8_4:54472839-54472858 | Msa1334160:CDS | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | - | chr8_4:54472863-54472882 | Msa1334160:CDS | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | + | chr8_4:54472881-54472900 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | - | chr8_4:54472890-54472909 | Msa1334160:CDS | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | - | chr8_4:54473119-54473138 | Msa1334160:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | - | chr8_4:54473120-54473139 | Msa1334160:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | - | chr8_4:54473121-54473140 | Msa1334160:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | - | chr8_4:54473202-54473221 | Msa1334160:CDS | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | + | chr8_4:54473272-54473291 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | + | chr8_4:54473273-54473292 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | + | chr8_4:54473425-54473444 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | - | chr8_4:54473454-54473473 | Msa1334160:CDS | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | + | chr8_4:54473498-54473517 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | - | chr8_4:54473498-54473517 | Msa1334160:CDS | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | - | chr8_4:54473542-54473561 | Msa1334160:CDS | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | - | chr8_4:54473620-54473639 | Msa1334160:CDS | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | - | chr8_4:54473621-54473640 | Msa1334160:CDS | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | - | chr8_4:54473767-54473786 | Msa1334160:CDS | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | - | chr8_4:54473785-54473804 | Msa1334160:CDS | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | + | chr8_4:54473841-54473860 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | - | chr8_4:54473843-54473862 | Msa1334160:CDS | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | - | chr8_4:54473913-54473932 | Msa1334160:CDS | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | + | chr8_4:54473929-54473948 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | + | chr8_4:54473962-54473981 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | - | chr8_4:54473960-54473979 | Msa1334160:CDS | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | - | chr8_4:54474087-54474106 | Msa1334160:CDS | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | + | chr8_4:54474094-54474113 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | - | chr8_4:54474092-54474111 | Msa1334160:CDS | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | + | chr8_4:54474195-54474214 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | - | chr8_4:54474195-54474214 | Msa1334160:CDS | 35.0% | |
| GAATTTGAGGGGTTTATGAA+TGG | + | chr8_4:54472705-54472724 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | + | chr8_4:54472749-54472768 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | - | chr8_4:54472839-54472858 | Msa1334160:CDS | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | - | chr8_4:54472863-54472882 | Msa1334160:CDS | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | + | chr8_4:54472881-54472900 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | - | chr8_4:54472890-54472909 | Msa1334160:CDS | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | - | chr8_4:54473119-54473138 | Msa1334160:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | - | chr8_4:54473120-54473139 | Msa1334160:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | - | chr8_4:54473121-54473140 | Msa1334160:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | - | chr8_4:54473202-54473221 | Msa1334160:CDS | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | + | chr8_4:54473272-54473291 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | + | chr8_4:54473273-54473292 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | + | chr8_4:54473425-54473444 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | - | chr8_4:54473454-54473473 | Msa1334160:CDS | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | + | chr8_4:54473498-54473517 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | - | chr8_4:54473498-54473517 | Msa1334160:CDS | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | - | chr8_4:54473542-54473561 | Msa1334160:CDS | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | - | chr8_4:54473620-54473639 | Msa1334160:CDS | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | - | chr8_4:54473621-54473640 | Msa1334160:CDS | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | - | chr8_4:54473767-54473786 | Msa1334160:CDS | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | - | chr8_4:54473785-54473804 | Msa1334160:CDS | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | + | chr8_4:54473841-54473860 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | - | chr8_4:54473843-54473862 | Msa1334160:CDS | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | - | chr8_4:54473913-54473932 | Msa1334160:CDS | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | + | chr8_4:54473929-54473948 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | + | chr8_4:54473962-54473981 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | - | chr8_4:54473960-54473979 | Msa1334160:CDS | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | - | chr8_4:54474087-54474106 | Msa1334160:CDS | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | + | chr8_4:54474094-54474113 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | - | chr8_4:54474092-54474111 | Msa1334160:CDS | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | + | chr8_4:54474195-54474214 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | - | chr8_4:54474195-54474214 | Msa1334160:CDS | 35.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | + | chr8_4:54472841-54472860 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | + | chr8_4:54472861-54472880 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | + | chr8_4:54473123-54473142 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | - | chr8_4:54473264-54473283 | Msa1334160:CDS | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | + | chr8_4:54473360-54473379 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | - | chr8_4:54473360-54473379 | Msa1334160:CDS | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | - | chr8_4:54473406-54473425 | Msa1334160:CDS | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | - | chr8_4:54473486-54473505 | Msa1334160:CDS | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | - | chr8_4:54473487-54473506 | Msa1334160:CDS | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | - | chr8_4:54473726-54473745 | Msa1334160:CDS | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | - | chr8_4:54473754-54473773 | Msa1334160:CDS | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | + | chr8_4:54473762-54473781 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | - | chr8_4:54473768-54473787 | Msa1334160:CDS | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | + | chr8_4:54473833-54473852 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | - | chr8_4:54473873-54473892 | Msa1334160:CDS | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | + | chr8_4:54473968-54473987 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | - | chr8_4:54474034-54474053 | Msa1334160:CDS | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | + | chr8_4:54474102-54474121 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | + | chr8_4:54474194-54474213 | None:intergenic | 40.0% | |
| GAGTTGTGACCAAGAAGATT+AGG | + | chr8_4:54474207-54474226 | None:intergenic | 40.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | + | chr8_4:54472841-54472860 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | + | chr8_4:54472861-54472880 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | + | chr8_4:54473123-54473142 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | - | chr8_4:54473264-54473283 | Msa1334160:CDS | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | + | chr8_4:54473360-54473379 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | - | chr8_4:54473360-54473379 | Msa1334160:CDS | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | - | chr8_4:54473406-54473425 | Msa1334160:CDS | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | - | chr8_4:54473486-54473505 | Msa1334160:CDS | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | - | chr8_4:54473487-54473506 | Msa1334160:CDS | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | - | chr8_4:54473726-54473745 | Msa1334160:CDS | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | - | chr8_4:54473754-54473773 | Msa1334160:CDS | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | + | chr8_4:54473762-54473781 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | - | chr8_4:54473768-54473787 | Msa1334160:CDS | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | + | chr8_4:54473833-54473852 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | - | chr8_4:54473873-54473892 | Msa1334160:CDS | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | + | chr8_4:54473968-54473987 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | - | chr8_4:54474034-54474053 | Msa1334160:CDS | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | + | chr8_4:54474102-54474121 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | + | chr8_4:54474194-54474213 | None:intergenic | 40.0% | |
| GAGTTGTGACCAAGAAGATT+AGG | + | chr8_4:54474207-54474226 | None:intergenic | 40.0% | |
| AGCAGGTGATATACAGCGAT+CGG | + | chr8_4:54472681-54472700 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | + | chr8_4:54472698-54472717 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | - | chr8_4:54472844-54472863 | Msa1334160:CDS | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | + | chr8_4:54472905-54472924 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | - | chr8_4:54472907-54472926 | Msa1334160:CDS | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | + | chr8_4:54472958-54472977 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | + | chr8_4:54472959-54472978 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | - | chr8_4:54472956-54472975 | Msa1334160:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | + | chr8_4:54473005-54473024 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | + | chr8_4:54473023-54473042 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | + | chr8_4:54473024-54473043 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | - | chr8_4:54473547-54473566 | Msa1334160:CDS | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | - | chr8_4:54473548-54473567 | Msa1334160:CDS | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | - | chr8_4:54473549-54473568 | Msa1334160:CDS | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | - | chr8_4:54473610-54473629 | Msa1334160:CDS | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | - | chr8_4:54473658-54473677 | Msa1334160:CDS | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | - | chr8_4:54473659-54473678 | Msa1334160:CDS | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | - | chr8_4:54473874-54473893 | Msa1334160:CDS | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | - | chr8_4:54473969-54473988 | Msa1334160:CDS | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | - | chr8_4:54473970-54473989 | Msa1334160:CDS | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | - | chr8_4:54474030-54474049 | Msa1334160:CDS | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | - | chr8_4:54474033-54474052 | Msa1334160:CDS | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | + | chr8_4:54474156-54474175 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | + | chr8_4:54474157-54474176 | None:intergenic | 45.0% | |
| AGCAGGTGATATACAGCGAT+CGG | + | chr8_4:54472681-54472700 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | + | chr8_4:54472698-54472717 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | - | chr8_4:54472844-54472863 | Msa1334160:CDS | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | + | chr8_4:54472905-54472924 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | - | chr8_4:54472907-54472926 | Msa1334160:CDS | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | + | chr8_4:54472958-54472977 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | + | chr8_4:54472959-54472978 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | - | chr8_4:54472956-54472975 | Msa1334160:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | + | chr8_4:54473005-54473024 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | + | chr8_4:54473023-54473042 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | + | chr8_4:54473024-54473043 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | - | chr8_4:54473547-54473566 | Msa1334160:CDS | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | - | chr8_4:54473548-54473567 | Msa1334160:CDS | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | - | chr8_4:54473549-54473568 | Msa1334160:CDS | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | - | chr8_4:54473610-54473629 | Msa1334160:CDS | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | - | chr8_4:54473658-54473677 | Msa1334160:CDS | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | - | chr8_4:54473659-54473678 | Msa1334160:CDS | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | - | chr8_4:54473874-54473893 | Msa1334160:CDS | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | - | chr8_4:54473969-54473988 | Msa1334160:CDS | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | - | chr8_4:54473970-54473989 | Msa1334160:CDS | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | - | chr8_4:54474030-54474049 | Msa1334160:CDS | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | - | chr8_4:54474033-54474052 | Msa1334160:CDS | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | + | chr8_4:54474156-54474175 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | + | chr8_4:54474157-54474176 | None:intergenic | 45.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | - | chr8_4:54472655-54472674 | Msa1334160:CDS | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | + | chr8_4:54472716-54472735 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | + | chr8_4:54472717-54472736 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | + | chr8_4:54472852-54472871 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | + | chr8_4:54472960-54472979 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | + | chr8_4:54473017-54473036 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | + | chr8_4:54473551-54473570 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | + | chr8_4:54473665-54473684 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | - | chr8_4:54473757-54473776 | Msa1334160:CDS | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | - | chr8_4:54473856-54473875 | Msa1334160:CDS | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | - | chr8_4:54473880-54473899 | Msa1334160:CDS | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | - | chr8_4:54473971-54473990 | Msa1334160:CDS | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | - | chr8_4:54474012-54474031 | Msa1334160:CDS | 50.0% | |
| TACCCTGTCCAACTTTACCC+TGG | - | chr8_4:54474136-54474155 | Msa1334160:CDS | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | - | chr8_4:54474137-54474156 | Msa1334160:CDS | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | + | chr8_4:54474141-54474160 | None:intergenic | 50.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | - | chr8_4:54472655-54472674 | Msa1334160:CDS | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | + | chr8_4:54472716-54472735 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | + | chr8_4:54472717-54472736 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | + | chr8_4:54472852-54472871 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | + | chr8_4:54472960-54472979 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | + | chr8_4:54473017-54473036 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | + | chr8_4:54473551-54473570 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | + | chr8_4:54473665-54473684 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | - | chr8_4:54473757-54473776 | Msa1334160:CDS | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | - | chr8_4:54473856-54473875 | Msa1334160:CDS | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | - | chr8_4:54473880-54473899 | Msa1334160:CDS | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | - | chr8_4:54473971-54473990 | Msa1334160:CDS | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | - | chr8_4:54474012-54474031 | Msa1334160:CDS | 50.0% | |
| TACCCTGTCCAACTTTACCC+TGG | - | chr8_4:54474136-54474155 | Msa1334160:CDS | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | - | chr8_4:54474137-54474156 | Msa1334160:CDS | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | + | chr8_4:54474141-54474160 | None:intergenic | 50.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | + | chr8_4:54472718-54472737 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | - | chr8_4:54473018-54473037 | Msa1334160:CDS | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | - | chr8_4:54473976-54473995 | Msa1334160:CDS | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | - | chr8_4:54473977-54473996 | Msa1334160:CDS | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | - | chr8_4:54473996-54474015 | Msa1334160:CDS | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | - | chr8_4:54474017-54474036 | Msa1334160:CDS | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | + | chr8_4:54474142-54474161 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | - | chr8_4:54474140-54474159 | Msa1334160:CDS | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | - | chr8_4:54474143-54474162 | Msa1334160:CDS | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | + | chr8_4:54474147-54474166 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | - | chr8_4:54474146-54474165 | Msa1334160:CDS | 55.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | + | chr8_4:54472718-54472737 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | - | chr8_4:54473018-54473037 | Msa1334160:CDS | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | - | chr8_4:54473976-54473995 | Msa1334160:CDS | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | - | chr8_4:54473977-54473996 | Msa1334160:CDS | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | - | chr8_4:54473996-54474015 | Msa1334160:CDS | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | - | chr8_4:54474017-54474036 | Msa1334160:CDS | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | + | chr8_4:54474142-54474161 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | - | chr8_4:54474140-54474159 | Msa1334160:CDS | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | - | chr8_4:54474143-54474162 | Msa1334160:CDS | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | + | chr8_4:54474147-54474166 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | - | chr8_4:54474146-54474165 | Msa1334160:CDS | 55.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | + | chr8_4:54472730-54472749 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | - | chr8_4:54472943-54472962 | Msa1334160:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | - | chr8_4:54472944-54472963 | Msa1334160:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | - | chr8_4:54473975-54473994 | Msa1334160:CDS | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | + | chr8_4:54473988-54474007 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | - | chr8_4:54473986-54474005 | Msa1334160:CDS | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | - | chr8_4:54473991-54474010 | Msa1334160:CDS | 60.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | + | chr8_4:54472730-54472749 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | - | chr8_4:54472943-54472962 | Msa1334160:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | - | chr8_4:54472944-54472963 | Msa1334160:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | - | chr8_4:54473975-54473994 | Msa1334160:CDS | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | + | chr8_4:54473988-54474007 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | - | chr8_4:54473986-54474005 | Msa1334160:CDS | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | - | chr8_4:54473991-54474010 | Msa1334160:CDS | 60.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | - | chr8_4:54473981-54474000 | Msa1334160:CDS | 65.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | - | chr8_4:54473981-54474000 | Msa1334160:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 54472653 | 54474245 | 54472653 | ID=Msa1334160;Name=Msa1334160 |
| chr8_4 | mRNA | 54472653 | 54474245 | 54472653 | ID=Msa1334160-mRNA-1;Parent=Msa1334160;Name=Msa1334160-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|530 |
| chr8_4 | exon | 54472653 | 54474245 | 54472653 | ID=Msa1334160-mRNA-1:exon:16952;Parent=Msa1334160-mRNA-1 |
| chr8_4 | CDS | 54472653 | 54474245 | 54472653 | ID=Msa1334160-mRNA-1:cds;Parent=Msa1334160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
