AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1416560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416560 MtrunA17_Chr4g0073611 88.000 275 33 0 144 418 1 275 1.26e-177 501
Msa1416560 MtrunA17_Chr4g0061881 48.671 602 188 14 13 501 3 596 3.63e-162 476
Msa1416560 MtrunA17_Chr2g0307851 46.816 534 173 11 72 501 82 608 2.01e-139 418
Msa1416560 MtrunA17_Chr5g0408331 47.006 334 116 10 74 402 35 312 3.48e-80 253
Msa1416560 MtrunA17_Chr5g0437391 43.902 328 102 12 189 465 4 300 6.72e-62 206
Msa1416560 MtrunA17_Chr4g0061841 39.274 303 72 7 145 415 9 231 8.94e-53 179
Msa1416560 MtrunA17_Chr4g0069071 34.118 340 177 10 126 429 5 333 5.18e-44 159
Msa1416560 MtrunA17_Chr4g0073621 93.056 72 5 0 441 512 6 77 1.47e-41 143
Msa1416560 MtrunA17_Chr4g0076571 64.516 93 32 1 140 232 1 92 4.31e-33 121
Msa1416560 MtrunA17_Chr4g0076561 51.389 144 60 4 303 437 2 144 4.10e-32 122
Msa1416560 MtrunA17_Chr8g0344851 47.024 168 30 4 384 494 1 166 8.04e-32 121
Msa1416560 MtrunA17_Chr4g0064001 45.732 164 35 5 408 523 3 160 1.92e-26 107
Msa1416560 MtrunA17_Chr5g0437441 55.238 105 40 3 98 198 1 102 1.10e-25 101
Msa1416560 MtrunA17_Chr5g0437451 40.761 184 66 8 313 490 2 148 2.21e-23 96.7
Msa1416560 MtrunA17_Chr8g0344831 50.435 115 53 2 297 408 8 121 7.64e-23 94.0
Msa1416560 MtrunA17_Chr5g0408341 66.667 60 18 1 441 500 1 58 4.07e-18 81.3
Msa1416560 MtrunA17_Chr8g0344821 74.074 54 12 1 441 494 56 107 1.15e-17 79.0
Msa1416560 MtrunA17_Chr4g0061831 71.698 53 13 1 441 493 66 116 1.04e-15 73.6
Msa1416560 MtrunA17_Chr4g0063991 59.701 67 23 2 313 376 2 67 1.26e-14 69.3
Msa1416560 MtrunA17_Chr4g0063981 71.429 35 10 0 174 208 1 35 3.53e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416560 AT1G73990.1 41.418 536 207 10 68 501 84 614 8.11e-114 352
Msa1416560 AT1G73990.2 45.890 438 188 8 68 461 84 516 7.64e-112 345

Find 127 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAACCAGTGTTCAAATTT+TGG 0.096910 tig0024372:-33550 None:intergenic
TTGGAAAAGGATCTATTATT+TGG 0.128131 tig0024372:-34376 None:intergenic
CGAGACAACAACTGCATTAA+TGG 0.184426 tig0024372:+33790 Msa1416560:CDS
TTTGCTTATGTCCCTGAAAT+TGG 0.196065 tig0024372:+33632 Msa1416560:CDS
TGGATAATATTTACTCAAAT+TGG 0.197209 tig0024372:+33810 Msa1416560:CDS
AATTTGGAAGGTAAGATTTC+TGG 0.242205 tig0024372:+33239 Msa1416560:CDS
TGGAACCTCTTCCATTGATT+TGG 0.252339 tig0024372:-34395 None:intergenic
TTTGTTGAGGTTCATTTGTA+TGG 0.259020 tig0024372:+33707 Msa1416560:CDS
AGGAGGAATTTAATCTTCTT+TGG 0.260660 tig0024372:+34593 Msa1416560:CDS
CTCGGTTTGGTTGATGCTAT+TGG 0.265550 tig0024372:+34460 Msa1416560:CDS
CATAACGGATTTACTGTATA+TGG 0.271470 tig0024372:+33943 Msa1416560:CDS
CAGTTCAGGAGGTAAATTTC+GGG 0.292898 tig0024372:+34198 Msa1416560:CDS
TGAAGCAATGACGGGTATTT+CGG 0.318803 tig0024372:-34260 None:intergenic
TTAGTGCATCCTAATCTTCT+TGG 0.333889 tig0024372:+34625 Msa1416560:CDS
ACAGTTCAGGAGGTAAATTT+CGG 0.345303 tig0024372:+34197 Msa1416560:CDS
GCAGAAAATCTTACCTTAGT+TGG 0.347938 tig0024372:+34343 Msa1416560:CDS
ATCTTAAATTTCAGAAAATC+AGG 0.347978 tig0024372:+33599 Msa1416560:CDS
CCAAAATTTGAACACTGGTT+GGG 0.355126 tig0024372:+33550 Msa1416560:CDS
ATAGCCATCATTCGAGTCTC+AGG 0.356408 tig0024372:+34088 Msa1416560:CDS
CACAGGGGAAGGGGAAGGTT+TGG 0.359665 tig0024372:+34416 Msa1416560:CDS
TTATGAAACCCTCTTCTTTG+AGG 0.367459 tig0024372:-33925 None:intergenic
AGTTTATTGAGAATATATAT+AGG 0.377641 tig0024372:+34131 Msa1416560:CDS
AAGGCCAATATACCTCAAAA+TGG 0.388556 tig0024372:+34517 Msa1416560:CDS
CTCTGGCTTGAAGAAGTATC+TGG 0.400164 tig0024372:+33337 Msa1416560:CDS
CTCTTCCATTGATTTGGAAA+AGG 0.400283 tig0024372:-34389 None:intergenic
ATTGTCCGAATTGACAGTTC+AGG 0.411636 tig0024372:+34184 Msa1416560:CDS
CCTACTTGAAGGAAAGGCTT+GGG 0.430422 tig0024372:+33978 Msa1416560:CDS
TGGATAATCAACATCCTTGC+CGG 0.434812 tig0024372:-33288 None:intergenic
GTTTATTGAGAATATATATA+GGG 0.435192 tig0024372:+34132 Msa1416560:CDS
TCCAAAATTTGAACACTGGT+TGG 0.435258 tig0024372:+33549 Msa1416560:CDS
GCTCGTGCGGTAGAATTTGA+GGG 0.437753 tig0024372:-33144 None:intergenic
TACCTCCTGAACTGTCAATT+CGG 0.443292 tig0024372:-34189 None:intergenic
GTTCTTCAAATCAATTTGTC+CGG 0.445006 tig0024372:+33413 Msa1416560:CDS
TCCTCCTCCCAGGGTAAAGT+TGG 0.446367 tig0024372:-34574 None:intergenic
GAATTTGAGGGGTTTATGAA+TGG 0.450237 tig0024372:-33132 None:intergenic
CTCCCAGGGTAAAGTTGGAC+AGG 0.450486 tig0024372:-34569 None:intergenic
TACAAATGAACCTCAACAAA+AGG 0.456509 tig0024372:-33704 None:intergenic
CAAAATTTGAACACTGGTTG+GGG 0.459205 tig0024372:+33551 Msa1416560:CDS
GGAAGAGGTTCCACAGGGGA+AGG 0.463372 tig0024372:+34405 Msa1416560:CDS
AAGAGGTTCCACAGGGGAAG+GGG 0.467563 tig0024372:+34407 Msa1416560:CDS
ATTAAATTCCTCCTCCTCCC+AGG 0.476401 tig0024372:-34584 None:intergenic
AGGGGTTTATGAATGGTAGC+AGG 0.476548 tig0024372:-33125 None:intergenic
AAGAGAAAATGTCGAAAACT+TGG 0.476552 tig0024372:+33865 Msa1416560:CDS
AAGGATGTTGATTATCCAAC+CGG 0.477750 tig0024372:+33293 Msa1416560:CDS
TGATATTATCACCTACTTGA+AGG 0.483027 tig0024372:+33967 Msa1416560:CDS
CAGAGCATCAACAGAATTCA+AGG 0.483419 tig0024372:+34156 Msa1416560:CDS
AACTTTACCCTGGGAGGAGG+AGG 0.483757 tig0024372:+34576 Msa1416560:CDS
GCAGGATACTACTTAGCAAC+GGG 0.485513 tig0024372:+34304 Msa1416560:CDS
GAGTTGTGACCAAGAAGATT+AGG 0.486888 tig0024372:-34634 None:intergenic
TACTACTTAGCAACGGGAGC+AGG 0.490304 tig0024372:+34310 Msa1416560:CDS
GGACGCAACATCTCTCGGTT+TGG 0.491111 tig0024372:+34447 Msa1416560:CDS
CGTTACTGCATTATTCGTAA+AGG 0.491356 tig0024372:+34656 Msa1416560:CDS
TTCGGGCATCTAATTATATG+TGG 0.492637 tig0024372:+34215 Msa1416560:CDS
TCTGATGTGGCAACAAGTGC+AGG 0.494828 tig0024372:+34286 Msa1416560:CDS
AACAAATTATCGCAAATTTG+AGG 0.494896 tig0024372:-33482 None:intergenic
CAAAGAAGAGGGTTTCATAA+CGG 0.495857 tig0024372:+33928 Msa1416560:CDS
AATCGACTGTTGGAATATCA+AGG 0.496160 tig0024372:+34050 Msa1416560:CDS
TATTGCTATAGCAAAATTGA+AGG 0.500409 tig0024372:+34498 Msa1416560:CDS
TACCTCTGAATCGGTGTGTA+GGG 0.501142 tig0024372:-33450 None:intergenic
CGCGTTAGTAAATCGACTGT+TGG 0.501184 tig0024372:+34040 Msa1416560:CDS
ATCAATGGAAGAGGTTCCAC+AGG 0.501640 tig0024372:+34399 Msa1416560:CDS
TAGAGATAATACCTCTGAAT+CGG 0.505324 tig0024372:-33459 None:intergenic
GAAGATTAGGATGCACTAAC+GGG 0.506538 tig0024372:-34621 None:intergenic
ACCTACTTGAAGGAAAGGCT+TGG 0.508749 tig0024372:+33977 Msa1416560:CDS
TTTGATTTCATTCCACACTC+TGG 0.514952 tig0024372:+33320 Msa1416560:CDS
GAAGAGGTTCCACAGGGGAA+GGG 0.517831 tig0024372:+34406 Msa1416560:CDS
TGGAATGAAATCAAAATCTC+CGG 0.524479 tig0024372:-33312 None:intergenic
TTATCACCTACTTGAAGGAA+AGG 0.529131 tig0024372:+33972 Msa1416560:CDS
AACATCCTTGCCGGAAGAAG+AGG 0.530642 tig0024372:-33279 None:intergenic
GGTTCCACAGGGGAAGGGGA+AGG 0.533194 tig0024372:+34411 Msa1416560:CDS
ATCAGATATTGAAGCAATGA+CGG 0.536024 tig0024372:-34269 None:intergenic
GGTTTGGTTGATGCTATTGG+TGG 0.540573 tig0024372:+34463 Msa1416560:CDS
TATTCTTTGAAAGAAACAAA+AGG 0.543012 tig0024372:-34013 None:intergenic
AAACTAAATTTGTCAACAGT+GGG 0.543801 tig0024372:-33731 None:intergenic
TGGACTAAAAGAACCAACTA+AGG 0.544447 tig0024372:-34356 None:intergenic
AGAAGATTAGGATGCACTAA+CGG 0.547063 tig0024372:-34622 None:intergenic
AATATCCAAAATTTGAACAC+TGG 0.547788 tig0024372:+33545 Msa1416560:CDS
ATACCTCTGAATCGGTGTGT+AGG 0.552557 tig0024372:-33451 None:intergenic
GTTTGGTTGATGCTATTGGT+GGG 0.556402 tig0024372:+34464 Msa1416560:CDS
TTGGTTAACTTCGTAACTGA+AGG 0.556482 tig0024372:+33884 Msa1416560:CDS
GGTAAGGACGCAACATCTCT+CGG 0.557645 tig0024372:+34442 Msa1416560:CDS
CACCCTACACACCGATTCAG+AGG 0.558538 tig0024372:+33448 Msa1416560:CDS
TACCCTGTCCAACTTTACCC+TGG 0.561366 tig0024372:+34566 Msa1416560:CDS
TGAATCGGTGTGTAGGGTGT+CGG 0.562552 tig0024372:-33444 None:intergenic
TCCAACTTTACCCTGGGAGG+AGG 0.565785 tig0024372:+34573 Msa1416560:CDS
GATGTAGTATCTTCTTCCAC+CGG 0.568021 tig0024372:+33836 Msa1416560:CDS
AGTAGAAGACCTCAAAGAAG+AGG 0.568425 tig0024372:+33916 Msa1416560:CDS
GTCACAGCGTTCATCTCTCA+TGG 0.568866 tig0024372:+33085 Msa1416560:CDS
AGACCCTGAGACTCGAATGA+TGG 0.571972 tig0024372:-34092 None:intergenic
AATGAACCTCAACAAAAGGA+TGG 0.572223 tig0024372:-33700 None:intergenic
CTCGTGCGGTAGAATTTGAG+GGG 0.580670 tig0024372:-33143 None:intergenic
TCAGATATTGAAGCAATGAC+GGG 0.581772 tig0024372:-34268 None:intergenic
CTGCTAGCACTCCCCTCAGA+GGG 0.583729 tig0024372:+33374 Msa1416560:CDS
ACCCTGTCCAACTTTACCCT+GGG 0.586996 tig0024372:+34567 Msa1416560:CDS
AGCAGGTGATATACAGCGAT+CGG 0.592109 tig0024372:-33108 None:intergenic
TAGGGTGTCGGATATTATGC+CGG 0.594782 tig0024372:-33432 None:intergenic
ATGAAATCAAAATCTCCGGT+TGG 0.594805 tig0024372:-33308 None:intergenic
TACTTCTTCAAGCCAGAGTG+TGG 0.594882 tig0024372:-33332 None:intergenic
GTAGAAGACCTCAAAGAAGA+GGG 0.597121 tig0024372:+33917 Msa1416560:CDS
TTAATGCAGTTGTTGTCTCG+TGG 0.598388 tig0024372:-33787 None:intergenic
ATCGACTGTTGGAATATCAA+GGG 0.598413 tig0024372:+34051 Msa1416560:CDS
AAAACTAAATTTGTCAACAG+TGG 0.601150 tig0024372:-33732 None:intergenic
CATTGCTTCAATATCTGATG+TGG 0.601190 tig0024372:+34273 Msa1416560:CDS
TTAAATTCCTCCTCCTCCCA+GGG 0.602774 tig0024372:-34583 None:intergenic
ATGAACCTCAACAAAAGGAT+GGG 0.602807 tig0024372:-33699 None:intergenic
GGGGAAGGTTTGGACTGGTA+AGG 0.604771 tig0024372:+34426 Msa1416560:CDS
TAGCCATCATTCGAGTCTCA+GGG 0.606571 tig0024372:+34089 Msa1416560:CDS
CGATCAATAATAGAAGATGA+TGG 0.608918 tig0024372:-33182 None:intergenic
TGCAGGATACTACTTAGCAA+CGG 0.610387 tig0024372:+34303 Msa1416560:CDS
CGGAAGAAGAGGAAAATAAG+TGG 0.613550 tig0024372:-33268 None:intergenic
CCCAAGCCTTTCCTTCAAGT+AGG 0.616569 tig0024372:-33978 None:intergenic
ATAATAGAAGATGATGGTGG+CGG 0.619265 tig0024372:-33176 None:intergenic
GTAAACTAGATGAAATTCGA+AGG 0.619983 tig0024372:+33573 Msa1416560:CDS
GTCCGAATTGACAGTTCAGG+AGG 0.622572 tig0024372:+34187 Msa1416560:CDS
CTACTTGAAGGAAAGGCTTG+GGG 0.625623 tig0024372:+33979 Msa1416560:CDS
GGGAAGGGGAAGGTTTGGAC+TGG 0.637451 tig0024372:+34421 Msa1416560:CDS
CAAACCTTCCCCTTCCCCTG+TGG 0.650489 tig0024372:-34415 None:intergenic
TCCCAGGGTAAAGTTGGACA+GGG 0.658955 tig0024372:-34568 None:intergenic
ATAAATACGAGGATCATACA+TGG 0.660349 tig0024372:-33510 None:intergenic
CAATATACCTCAAAATGGTG+AGG 0.660377 tig0024372:+34522 Msa1416560:CDS
CTGTCCAACTTTACCCTGGG+AGG 0.667967 tig0024372:+34570 Msa1416560:CDS
TCAATGGAAGAGGTTCCACA+GGG 0.668896 tig0024372:+34400 Msa1416560:CDS
TCTGCTAGCACTCCCCTCAG+AGG 0.672433 tig0024372:+33373 Msa1416560:CDS
GCGGTGATATTGCGCTCGTG+CGG 0.694021 tig0024372:-33157 None:intergenic
TCAATAATAGAAGATGATGG+TGG 0.696702 tig0024372:-33179 None:intergenic
AGATATACAGCATAAATACG+AGG 0.747490 tig0024372:-33521 None:intergenic
CAATGGAAGAGGTTCCACAG+GGG 0.794420 tig0024372:+34401 Msa1416560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTGAATTTTTTGTGAAT+CGG - tig0024372:33224-33243 None:intergenic 15.0%
!!! TGACAAATTTAGTTTTATTA+AGG + tig0024372:33739-33758 Msa1416560:CDS 15.0%
!!! GACAAATTTAGTTTTATTAA+GGG + tig0024372:33740-33759 Msa1416560:CDS 15.0%
!! AGTTTATTGAGAATATATAT+AGG + tig0024372:34131-34150 Msa1416560:CDS 15.0%
!! GTTTATTGAGAATATATATA+GGG + tig0024372:34132-34151 Msa1416560:CDS 15.0%
!!! AAATTGAATTTTTTGTGAAT+CGG - tig0024372:33224-33243 None:intergenic 15.0%
!!! TGACAAATTTAGTTTTATTA+AGG + tig0024372:33739-33758 Msa1416560:CDS 15.0%
!!! GACAAATTTAGTTTTATTAA+GGG + tig0024372:33740-33759 Msa1416560:CDS 15.0%
!! AGTTTATTGAGAATATATAT+AGG + tig0024372:34131-34150 Msa1416560:CDS 15.0%
!! GTTTATTGAGAATATATATA+GGG + tig0024372:34132-34151 Msa1416560:CDS 15.0%
!! GATTCACAAAAAATTCAATT+TGG + tig0024372:33223-33242 Msa1416560:CDS 20.0%
!! ATCTTAAATTTCAGAAAATC+AGG + tig0024372:33599-33618 Msa1416560:CDS 20.0%
!! TGGATAATATTTACTCAAAT+TGG + tig0024372:33810-33829 Msa1416560:CDS 20.0%
!!! TATTCTTTGAAAGAAACAAA+AGG - tig0024372:34016-34035 None:intergenic 20.0%
!! GATTCACAAAAAATTCAATT+TGG + tig0024372:33223-33242 Msa1416560:CDS 20.0%
!! ATCTTAAATTTCAGAAAATC+AGG + tig0024372:33599-33618 Msa1416560:CDS 20.0%
!! TGGATAATATTTACTCAAAT+TGG + tig0024372:33810-33829 Msa1416560:CDS 20.0%
!!! TATTCTTTGAAAGAAACAAA+AGG - tig0024372:34016-34035 None:intergenic 20.0%
! CACAAAAAATTCAATTTGGA+AGG + tig0024372:33227-33246 Msa1416560:CDS 25.0%
! AACAAATTATCGCAAATTTG+AGG - tig0024372:33485-33504 None:intergenic 25.0%
! AATATCCAAAATTTGAACAC+TGG + tig0024372:33545-33564 Msa1416560:CDS 25.0%
! AAACTAAATTTGTCAACAGT+GGG - tig0024372:33734-33753 None:intergenic 25.0%
! AAAACTAAATTTGTCAACAG+TGG - tig0024372:33735-33754 None:intergenic 25.0%
! TTGGAAAAGGATCTATTATT+TGG - tig0024372:34379-34398 None:intergenic 25.0%
! TATTGCTATAGCAAAATTGA+AGG + tig0024372:34498-34517 Msa1416560:CDS 25.0%
! CACAAAAAATTCAATTTGGA+AGG + tig0024372:33227-33246 Msa1416560:CDS 25.0%
! AACAAATTATCGCAAATTTG+AGG - tig0024372:33485-33504 None:intergenic 25.0%
! AATATCCAAAATTTGAACAC+TGG + tig0024372:33545-33564 Msa1416560:CDS 25.0%
! AAACTAAATTTGTCAACAGT+GGG - tig0024372:33734-33753 None:intergenic 25.0%
! AAAACTAAATTTGTCAACAG+TGG - tig0024372:33735-33754 None:intergenic 25.0%
! TTGGAAAAGGATCTATTATT+TGG - tig0024372:34379-34398 None:intergenic 25.0%
! TATTGCTATAGCAAAATTGA+AGG + tig0024372:34498-34517 Msa1416560:CDS 25.0%
! TCAATAATAGAAGATGATGG+TGG - tig0024372:33182-33201 None:intergenic 30.0%
CGATCAATAATAGAAGATGA+TGG - tig0024372:33185-33204 None:intergenic 30.0%
AATTTGGAAGGTAAGATTTC+TGG + tig0024372:33239-33258 Msa1416560:CDS 30.0%
TGGAATGAAATCAAAATCTC+CGG - tig0024372:33315-33334 None:intergenic 30.0%
GTTCTTCAAATCAATTTGTC+CGG + tig0024372:33413-33432 Msa1416560:CDS 30.0%
TAGAGATAATACCTCTGAAT+CGG - tig0024372:33462-33481 None:intergenic 30.0%
ATAAATACGAGGATCATACA+TGG - tig0024372:33513-33532 None:intergenic 30.0%
AGATATACAGCATAAATACG+AGG - tig0024372:33524-33543 None:intergenic 30.0%
GTAAACTAGATGAAATTCGA+AGG + tig0024372:33573-33592 Msa1416560:CDS 30.0%
! ACTCTTTTACTCCAATTTCA+GGG - tig0024372:33646-33665 None:intergenic 30.0%
! TACTCTTTTACTCCAATTTC+AGG - tig0024372:33647-33666 None:intergenic 30.0%
TACAAATGAACCTCAACAAA+AGG - tig0024372:33707-33726 None:intergenic 30.0%
TTTGTTGAGGTTCATTTGTA+TGG + tig0024372:33707-33726 Msa1416560:CDS 30.0%
! GACATTTTCTCTTTTCTTTC+CGG - tig0024372:33858-33877 None:intergenic 30.0%
AAGAGAAAATGTCGAAAACT+TGG + tig0024372:33865-33884 Msa1416560:CDS 30.0%
!! CATAACGGATTTACTGTATA+TGG + tig0024372:33943-33962 Msa1416560:CDS 30.0%
TGATATTATCACCTACTTGA+AGG + tig0024372:33967-33986 Msa1416560:CDS 30.0%
ATCAGATATTGAAGCAATGA+CGG - tig0024372:34272-34291 None:intergenic 30.0%
! TAGATCCTTTTCCAAATCAA+TGG + tig0024372:34384-34403 Msa1416560:CDS 30.0%
AGGAGGAATTTAATCTTCTT+TGG + tig0024372:34593-34612 Msa1416560:CDS 30.0%
! TCAATAATAGAAGATGATGG+TGG - tig0024372:33182-33201 None:intergenic 30.0%
CGATCAATAATAGAAGATGA+TGG - tig0024372:33185-33204 None:intergenic 30.0%
AATTTGGAAGGTAAGATTTC+TGG + tig0024372:33239-33258 Msa1416560:CDS 30.0%
TGGAATGAAATCAAAATCTC+CGG - tig0024372:33315-33334 None:intergenic 30.0%
GTTCTTCAAATCAATTTGTC+CGG + tig0024372:33413-33432 Msa1416560:CDS 30.0%
TAGAGATAATACCTCTGAAT+CGG - tig0024372:33462-33481 None:intergenic 30.0%
ATAAATACGAGGATCATACA+TGG - tig0024372:33513-33532 None:intergenic 30.0%
AGATATACAGCATAAATACG+AGG - tig0024372:33524-33543 None:intergenic 30.0%
GTAAACTAGATGAAATTCGA+AGG + tig0024372:33573-33592 Msa1416560:CDS 30.0%
! ACTCTTTTACTCCAATTTCA+GGG - tig0024372:33646-33665 None:intergenic 30.0%
! TACTCTTTTACTCCAATTTC+AGG - tig0024372:33647-33666 None:intergenic 30.0%
TACAAATGAACCTCAACAAA+AGG - tig0024372:33707-33726 None:intergenic 30.0%
TTTGTTGAGGTTCATTTGTA+TGG + tig0024372:33707-33726 Msa1416560:CDS 30.0%
! GACATTTTCTCTTTTCTTTC+CGG - tig0024372:33858-33877 None:intergenic 30.0%
AAGAGAAAATGTCGAAAACT+TGG + tig0024372:33865-33884 Msa1416560:CDS 30.0%
!! CATAACGGATTTACTGTATA+TGG + tig0024372:33943-33962 Msa1416560:CDS 30.0%
TGATATTATCACCTACTTGA+AGG + tig0024372:33967-33986 Msa1416560:CDS 30.0%
ATCAGATATTGAAGCAATGA+CGG - tig0024372:34272-34291 None:intergenic 30.0%
! TAGATCCTTTTCCAAATCAA+TGG + tig0024372:34384-34403 Msa1416560:CDS 30.0%
AGGAGGAATTTAATCTTCTT+TGG + tig0024372:34593-34612 Msa1416560:CDS 30.0%
GAATTTGAGGGGTTTATGAA+TGG - tig0024372:33135-33154 None:intergenic 35.0%
!! ATAATAGAAGATGATGGTGG+CGG - tig0024372:33179-33198 None:intergenic 35.0%
!! CACTTATTTTCCTCTTCTTC+CGG + tig0024372:33269-33288 Msa1416560:CDS 35.0%
! AAGGATGTTGATTATCCAAC+CGG + tig0024372:33293-33312 Msa1416560:CDS 35.0%
ATGAAATCAAAATCTCCGGT+TGG - tig0024372:33311-33330 None:intergenic 35.0%
! TTTGATTTCATTCCACACTC+TGG + tig0024372:33320-33339 Msa1416560:CDS 35.0%
TCCAAAATTTGAACACTGGT+TGG + tig0024372:33549-33568 Msa1416560:CDS 35.0%
! CCAAAATTTGAACACTGGTT+GGG + tig0024372:33550-33569 Msa1416560:CDS 35.0%
! CAAAATTTGAACACTGGTTG+GGG + tig0024372:33551-33570 Msa1416560:CDS 35.0%
TTTGCTTATGTCCCTGAAAT+TGG + tig0024372:33632-33651 Msa1416560:CDS 35.0%
ATGAACCTCAACAAAAGGAT+GGG - tig0024372:33702-33721 None:intergenic 35.0%
AATGAACCTCAACAAAAGGA+TGG - tig0024372:33703-33722 None:intergenic 35.0%
! ATTTTCTCTTTTCTTTCCGG+TGG - tig0024372:33855-33874 None:intergenic 35.0%
TTGGTTAACTTCGTAACTGA+AGG + tig0024372:33884-33903 Msa1416560:CDS 35.0%
TTATGAAACCCTCTTCTTTG+AGG - tig0024372:33928-33947 None:intergenic 35.0%
CAAAGAAGAGGGTTTCATAA+CGG + tig0024372:33928-33947 Msa1416560:CDS 35.0%
TTATCACCTACTTGAAGGAA+AGG + tig0024372:33972-33991 Msa1416560:CDS 35.0%
AATCGACTGTTGGAATATCA+AGG + tig0024372:34050-34069 Msa1416560:CDS 35.0%
ATCGACTGTTGGAATATCAA+GGG + tig0024372:34051-34070 Msa1416560:CDS 35.0%
ACAGTTCAGGAGGTAAATTT+CGG + tig0024372:34197-34216 Msa1416560:CDS 35.0%
TTCGGGCATCTAATTATATG+TGG + tig0024372:34215-34234 Msa1416560:CDS 35.0%
TCAGATATTGAAGCAATGAC+GGG - tig0024372:34271-34290 None:intergenic 35.0%
CATTGCTTCAATATCTGATG+TGG + tig0024372:34273-34292 Msa1416560:CDS 35.0%
GCAGAAAATCTTACCTTAGT+TGG + tig0024372:34343-34362 Msa1416560:CDS 35.0%
TGGACTAAAAGAACCAACTA+AGG - tig0024372:34359-34378 None:intergenic 35.0%
!! CTCTTCCATTGATTTGGAAA+AGG - tig0024372:34392-34411 None:intergenic 35.0%
! CTTTTCCAAATCAATGGAAG+AGG + tig0024372:34390-34409 Msa1416560:CDS 35.0%
AAGGCCAATATACCTCAAAA+TGG + tig0024372:34517-34536 Msa1416560:CDS 35.0%
!!! CTCACCATTTTGAGGTATAT+TGG - tig0024372:34524-34543 None:intergenic 35.0%
CAATATACCTCAAAATGGTG+AGG + tig0024372:34522-34541 Msa1416560:CDS 35.0%
AGAAGATTAGGATGCACTAA+CGG - tig0024372:34625-34644 None:intergenic 35.0%
TTAGTGCATCCTAATCTTCT+TGG + tig0024372:34625-34644 Msa1416560:CDS 35.0%
GAATTTGAGGGGTTTATGAA+TGG - tig0024372:33135-33154 None:intergenic 35.0%
!! ATAATAGAAGATGATGGTGG+CGG - tig0024372:33179-33198 None:intergenic 35.0%
!! CACTTATTTTCCTCTTCTTC+CGG + tig0024372:33269-33288 Msa1416560:CDS 35.0%
! AAGGATGTTGATTATCCAAC+CGG + tig0024372:33293-33312 Msa1416560:CDS 35.0%
ATGAAATCAAAATCTCCGGT+TGG - tig0024372:33311-33330 None:intergenic 35.0%
! TTTGATTTCATTCCACACTC+TGG + tig0024372:33320-33339 Msa1416560:CDS 35.0%
TCCAAAATTTGAACACTGGT+TGG + tig0024372:33549-33568 Msa1416560:CDS 35.0%
! CCAAAATTTGAACACTGGTT+GGG + tig0024372:33550-33569 Msa1416560:CDS 35.0%
! CAAAATTTGAACACTGGTTG+GGG + tig0024372:33551-33570 Msa1416560:CDS 35.0%
TTTGCTTATGTCCCTGAAAT+TGG + tig0024372:33632-33651 Msa1416560:CDS 35.0%
ATGAACCTCAACAAAAGGAT+GGG - tig0024372:33702-33721 None:intergenic 35.0%
AATGAACCTCAACAAAAGGA+TGG - tig0024372:33703-33722 None:intergenic 35.0%
! ATTTTCTCTTTTCTTTCCGG+TGG - tig0024372:33855-33874 None:intergenic 35.0%
TTGGTTAACTTCGTAACTGA+AGG + tig0024372:33884-33903 Msa1416560:CDS 35.0%
TTATGAAACCCTCTTCTTTG+AGG - tig0024372:33928-33947 None:intergenic 35.0%
CAAAGAAGAGGGTTTCATAA+CGG + tig0024372:33928-33947 Msa1416560:CDS 35.0%
TTATCACCTACTTGAAGGAA+AGG + tig0024372:33972-33991 Msa1416560:CDS 35.0%
AATCGACTGTTGGAATATCA+AGG + tig0024372:34050-34069 Msa1416560:CDS 35.0%
ATCGACTGTTGGAATATCAA+GGG + tig0024372:34051-34070 Msa1416560:CDS 35.0%
ACAGTTCAGGAGGTAAATTT+CGG + tig0024372:34197-34216 Msa1416560:CDS 35.0%
TTCGGGCATCTAATTATATG+TGG + tig0024372:34215-34234 Msa1416560:CDS 35.0%
TCAGATATTGAAGCAATGAC+GGG - tig0024372:34271-34290 None:intergenic 35.0%
CATTGCTTCAATATCTGATG+TGG + tig0024372:34273-34292 Msa1416560:CDS 35.0%
GCAGAAAATCTTACCTTAGT+TGG + tig0024372:34343-34362 Msa1416560:CDS 35.0%
TGGACTAAAAGAACCAACTA+AGG - tig0024372:34359-34378 None:intergenic 35.0%
!! CTCTTCCATTGATTTGGAAA+AGG - tig0024372:34392-34411 None:intergenic 35.0%
! CTTTTCCAAATCAATGGAAG+AGG + tig0024372:34390-34409 Msa1416560:CDS 35.0%
AAGGCCAATATACCTCAAAA+TGG + tig0024372:34517-34536 Msa1416560:CDS 35.0%
!!! CTCACCATTTTGAGGTATAT+TGG - tig0024372:34524-34543 None:intergenic 35.0%
CAATATACCTCAAAATGGTG+AGG + tig0024372:34522-34541 Msa1416560:CDS 35.0%
AGAAGATTAGGATGCACTAA+CGG - tig0024372:34625-34644 None:intergenic 35.0%
TTAGTGCATCCTAATCTTCT+TGG + tig0024372:34625-34644 Msa1416560:CDS 35.0%
CGGAAGAAGAGGAAAATAAG+TGG - tig0024372:33271-33290 None:intergenic 40.0%
TGGATAATCAACATCCTTGC+CGG - tig0024372:33291-33310 None:intergenic 40.0%
! CCCAACCAGTGTTCAAATTT+TGG - tig0024372:33553-33572 None:intergenic 40.0%
! ATATGCCCATCCTTTTGTTG+AGG + tig0024372:33694-33713 Msa1416560:CDS 40.0%
TTAATGCAGTTGTTGTCTCG+TGG - tig0024372:33790-33809 None:intergenic 40.0%
CGAGACAACAACTGCATTAA+TGG + tig0024372:33790-33809 Msa1416560:CDS 40.0%
GATGTAGTATCTTCTTCCAC+CGG + tig0024372:33836-33855 Msa1416560:CDS 40.0%
AGTAGAAGACCTCAAAGAAG+AGG + tig0024372:33916-33935 Msa1416560:CDS 40.0%
GTAGAAGACCTCAAAGAAGA+GGG + tig0024372:33917-33936 Msa1416560:CDS 40.0%
! CAGAGCATCAACAGAATTCA+AGG + tig0024372:34156-34175 Msa1416560:CDS 40.0%
ATTGTCCGAATTGACAGTTC+AGG + tig0024372:34184-34203 Msa1416560:CDS 40.0%
TACCTCCTGAACTGTCAATT+CGG - tig0024372:34192-34211 None:intergenic 40.0%
CAGTTCAGGAGGTAAATTTC+GGG + tig0024372:34198-34217 Msa1416560:CDS 40.0%
!! TGAAGCAATGACGGGTATTT+CGG - tig0024372:34263-34282 None:intergenic 40.0%
TGCAGGATACTACTTAGCAA+CGG + tig0024372:34303-34322 Msa1416560:CDS 40.0%
! TGGAACCTCTTCCATTGATT+TGG - tig0024372:34398-34417 None:intergenic 40.0%
! GTTTGGTTGATGCTATTGGT+GGG + tig0024372:34464-34483 Msa1416560:CDS 40.0%
! AGAGTAACCTCACCATTTTG+AGG - tig0024372:34532-34551 None:intergenic 40.0%
GAAGATTAGGATGCACTAAC+GGG - tig0024372:34624-34643 None:intergenic 40.0%
GAGTTGTGACCAAGAAGATT+AGG - tig0024372:34637-34656 None:intergenic 40.0%
CGGAAGAAGAGGAAAATAAG+TGG - tig0024372:33271-33290 None:intergenic 40.0%
TGGATAATCAACATCCTTGC+CGG - tig0024372:33291-33310 None:intergenic 40.0%
! CCCAACCAGTGTTCAAATTT+TGG - tig0024372:33553-33572 None:intergenic 40.0%
! ATATGCCCATCCTTTTGTTG+AGG + tig0024372:33694-33713 Msa1416560:CDS 40.0%
TTAATGCAGTTGTTGTCTCG+TGG - tig0024372:33790-33809 None:intergenic 40.0%
CGAGACAACAACTGCATTAA+TGG + tig0024372:33790-33809 Msa1416560:CDS 40.0%
GATGTAGTATCTTCTTCCAC+CGG + tig0024372:33836-33855 Msa1416560:CDS 40.0%
AGTAGAAGACCTCAAAGAAG+AGG + tig0024372:33916-33935 Msa1416560:CDS 40.0%
GTAGAAGACCTCAAAGAAGA+GGG + tig0024372:33917-33936 Msa1416560:CDS 40.0%
! CAGAGCATCAACAGAATTCA+AGG + tig0024372:34156-34175 Msa1416560:CDS 40.0%
ATTGTCCGAATTGACAGTTC+AGG + tig0024372:34184-34203 Msa1416560:CDS 40.0%
TACCTCCTGAACTGTCAATT+CGG - tig0024372:34192-34211 None:intergenic 40.0%
CAGTTCAGGAGGTAAATTTC+GGG + tig0024372:34198-34217 Msa1416560:CDS 40.0%
!! TGAAGCAATGACGGGTATTT+CGG - tig0024372:34263-34282 None:intergenic 40.0%
TGCAGGATACTACTTAGCAA+CGG + tig0024372:34303-34322 Msa1416560:CDS 40.0%
! TGGAACCTCTTCCATTGATT+TGG - tig0024372:34398-34417 None:intergenic 40.0%
! GTTTGGTTGATGCTATTGGT+GGG + tig0024372:34464-34483 Msa1416560:CDS 40.0%
! AGAGTAACCTCACCATTTTG+AGG - tig0024372:34532-34551 None:intergenic 40.0%
GAAGATTAGGATGCACTAAC+GGG - tig0024372:34624-34643 None:intergenic 40.0%
GAGTTGTGACCAAGAAGATT+AGG - tig0024372:34637-34656 None:intergenic 40.0%
AGCAGGTGATATACAGCGAT+CGG - tig0024372:33111-33130 None:intergenic 45.0%
AGGGGTTTATGAATGGTAGC+AGG - tig0024372:33128-33147 None:intergenic 45.0%
! ATTTTCCTCTTCTTCCGGCA+AGG + tig0024372:33274-33293 Msa1416560:CDS 45.0%
TACTTCTTCAAGCCAGAGTG+TGG - tig0024372:33335-33354 None:intergenic 45.0%
!! CTCTGGCTTGAAGAAGTATC+TGG + tig0024372:33337-33356 Msa1416560:CDS 45.0%
! CGTTTTTAACACCCTCTGAG+GGG - tig0024372:33388-33407 None:intergenic 45.0%
!! CCGTTTTTAACACCCTCTGA+GGG - tig0024372:33389-33408 None:intergenic 45.0%
!! CCCTCAGAGGGTGTTAAAAA+CGG + tig0024372:33386-33405 Msa1416560:CDS 45.0%
!! TAGGGTGTCGGATATTATGC+CGG - tig0024372:33435-33454 None:intergenic 45.0%
TACCTCTGAATCGGTGTGTA+GGG - tig0024372:33453-33472 None:intergenic 45.0%
ATACCTCTGAATCGGTGTGT+AGG - tig0024372:33454-33473 None:intergenic 45.0%
ACCTACTTGAAGGAAAGGCT+TGG + tig0024372:33977-33996 Msa1416560:CDS 45.0%
CCTACTTGAAGGAAAGGCTT+GGG + tig0024372:33978-33997 Msa1416560:CDS 45.0%
CTACTTGAAGGAAAGGCTTG+GGG + tig0024372:33979-33998 Msa1416560:CDS 45.0%
CGCGTTAGTAAATCGACTGT+TGG + tig0024372:34040-34059 Msa1416560:CDS 45.0%
ATAGCCATCATTCGAGTCTC+AGG + tig0024372:34088-34107 Msa1416560:CDS 45.0%
TAGCCATCATTCGAGTCTCA+GGG + tig0024372:34089-34108 Msa1416560:CDS 45.0%
GCAGGATACTACTTAGCAAC+GGG + tig0024372:34304-34323 Msa1416560:CDS 45.0%
ATCAATGGAAGAGGTTCCAC+AGG + tig0024372:34399-34418 Msa1416560:CDS 45.0%
TCAATGGAAGAGGTTCCACA+GGG + tig0024372:34400-34419 Msa1416560:CDS 45.0%
!! CTCGGTTTGGTTGATGCTAT+TGG + tig0024372:34460-34479 Msa1416560:CDS 45.0%
! GGTTTGGTTGATGCTATTGG+TGG + tig0024372:34463-34482 Msa1416560:CDS 45.0%
TTAAATTCCTCCTCCTCCCA+GGG - tig0024372:34586-34605 None:intergenic 45.0%
ATTAAATTCCTCCTCCTCCC+AGG - tig0024372:34587-34606 None:intergenic 45.0%
AGCAGGTGATATACAGCGAT+CGG - tig0024372:33111-33130 None:intergenic 45.0%
AGGGGTTTATGAATGGTAGC+AGG - tig0024372:33128-33147 None:intergenic 45.0%
! ATTTTCCTCTTCTTCCGGCA+AGG + tig0024372:33274-33293 Msa1416560:CDS 45.0%
TACTTCTTCAAGCCAGAGTG+TGG - tig0024372:33335-33354 None:intergenic 45.0%
!! CTCTGGCTTGAAGAAGTATC+TGG + tig0024372:33337-33356 Msa1416560:CDS 45.0%
! CGTTTTTAACACCCTCTGAG+GGG - tig0024372:33388-33407 None:intergenic 45.0%
!! CCGTTTTTAACACCCTCTGA+GGG - tig0024372:33389-33408 None:intergenic 45.0%
!! CCCTCAGAGGGTGTTAAAAA+CGG + tig0024372:33386-33405 Msa1416560:CDS 45.0%
!! TAGGGTGTCGGATATTATGC+CGG - tig0024372:33435-33454 None:intergenic 45.0%
TACCTCTGAATCGGTGTGTA+GGG - tig0024372:33453-33472 None:intergenic 45.0%
ATACCTCTGAATCGGTGTGT+AGG - tig0024372:33454-33473 None:intergenic 45.0%
ACCTACTTGAAGGAAAGGCT+TGG + tig0024372:33977-33996 Msa1416560:CDS 45.0%
CCTACTTGAAGGAAAGGCTT+GGG + tig0024372:33978-33997 Msa1416560:CDS 45.0%
CTACTTGAAGGAAAGGCTTG+GGG + tig0024372:33979-33998 Msa1416560:CDS 45.0%
CGCGTTAGTAAATCGACTGT+TGG + tig0024372:34040-34059 Msa1416560:CDS 45.0%
ATAGCCATCATTCGAGTCTC+AGG + tig0024372:34088-34107 Msa1416560:CDS 45.0%
TAGCCATCATTCGAGTCTCA+GGG + tig0024372:34089-34108 Msa1416560:CDS 45.0%
GCAGGATACTACTTAGCAAC+GGG + tig0024372:34304-34323 Msa1416560:CDS 45.0%
ATCAATGGAAGAGGTTCCAC+AGG + tig0024372:34399-34418 Msa1416560:CDS 45.0%
TCAATGGAAGAGGTTCCACA+GGG + tig0024372:34400-34419 Msa1416560:CDS 45.0%
!! CTCGGTTTGGTTGATGCTAT+TGG + tig0024372:34460-34479 Msa1416560:CDS 45.0%
! GGTTTGGTTGATGCTATTGG+TGG + tig0024372:34463-34482 Msa1416560:CDS 45.0%
TTAAATTCCTCCTCCTCCCA+GGG - tig0024372:34586-34605 None:intergenic 45.0%
ATTAAATTCCTCCTCCTCCC+AGG - tig0024372:34587-34606 None:intergenic 45.0%
GTCACAGCGTTCATCTCTCA+TGG + tig0024372:33085-33104 Msa1416560:CDS 50.0%
CTCGTGCGGTAGAATTTGAG+GGG - tig0024372:33146-33165 None:intergenic 50.0%
GCTCGTGCGGTAGAATTTGA+GGG - tig0024372:33147-33166 None:intergenic 50.0%
AACATCCTTGCCGGAAGAAG+AGG - tig0024372:33282-33301 None:intergenic 50.0%
!!! GCCGTTTTTAACACCCTCTG+AGG - tig0024372:33390-33409 None:intergenic 50.0%
TGAATCGGTGTGTAGGGTGT+CGG - tig0024372:33447-33466 None:intergenic 50.0%
CCCAAGCCTTTCCTTCAAGT+AGG - tig0024372:33981-34000 None:intergenic 50.0%
AGACCCTGAGACTCGAATGA+TGG - tig0024372:34095-34114 None:intergenic 50.0%
GTCCGAATTGACAGTTCAGG+AGG + tig0024372:34187-34206 Msa1416560:CDS 50.0%
TCTGATGTGGCAACAAGTGC+AGG + tig0024372:34286-34305 Msa1416560:CDS 50.0%
TACTACTTAGCAACGGGAGC+AGG + tig0024372:34310-34329 Msa1416560:CDS 50.0%
CAATGGAAGAGGTTCCACAG+GGG + tig0024372:34401-34420 Msa1416560:CDS 50.0%
GGTAAGGACGCAACATCTCT+CGG + tig0024372:34442-34461 Msa1416560:CDS 50.0%
TACCCTGTCCAACTTTACCC+TGG + tig0024372:34566-34585 Msa1416560:CDS 50.0%
ACCCTGTCCAACTTTACCCT+GGG + tig0024372:34567-34586 Msa1416560:CDS 50.0%
TCCCAGGGTAAAGTTGGACA+GGG - tig0024372:34571-34590 None:intergenic 50.0%
GTCACAGCGTTCATCTCTCA+TGG + tig0024372:33085-33104 Msa1416560:CDS 50.0%
CTCGTGCGGTAGAATTTGAG+GGG - tig0024372:33146-33165 None:intergenic 50.0%
GCTCGTGCGGTAGAATTTGA+GGG - tig0024372:33147-33166 None:intergenic 50.0%
AACATCCTTGCCGGAAGAAG+AGG - tig0024372:33282-33301 None:intergenic 50.0%
!!! GCCGTTTTTAACACCCTCTG+AGG - tig0024372:33390-33409 None:intergenic 50.0%
TGAATCGGTGTGTAGGGTGT+CGG - tig0024372:33447-33466 None:intergenic 50.0%
CCCAAGCCTTTCCTTCAAGT+AGG - tig0024372:33981-34000 None:intergenic 50.0%
AGACCCTGAGACTCGAATGA+TGG - tig0024372:34095-34114 None:intergenic 50.0%
GTCCGAATTGACAGTTCAGG+AGG + tig0024372:34187-34206 Msa1416560:CDS 50.0%
TCTGATGTGGCAACAAGTGC+AGG + tig0024372:34286-34305 Msa1416560:CDS 50.0%
TACTACTTAGCAACGGGAGC+AGG + tig0024372:34310-34329 Msa1416560:CDS 50.0%
CAATGGAAGAGGTTCCACAG+GGG + tig0024372:34401-34420 Msa1416560:CDS 50.0%
GGTAAGGACGCAACATCTCT+CGG + tig0024372:34442-34461 Msa1416560:CDS 50.0%
TACCCTGTCCAACTTTACCC+TGG + tig0024372:34566-34585 Msa1416560:CDS 50.0%
ACCCTGTCCAACTTTACCCT+GGG + tig0024372:34567-34586 Msa1416560:CDS 50.0%
TCCCAGGGTAAAGTTGGACA+GGG - tig0024372:34571-34590 None:intergenic 50.0%
CGCTCGTGCGGTAGAATTTG+AGG - tig0024372:33148-33167 None:intergenic 55.0%
!! CACCCTACACACCGATTCAG+AGG + tig0024372:33448-33467 Msa1416560:CDS 55.0%
GAAGAGGTTCCACAGGGGAA+GGG + tig0024372:34406-34425 Msa1416560:CDS 55.0%
AAGAGGTTCCACAGGGGAAG+GGG + tig0024372:34407-34426 Msa1416560:CDS 55.0%
!! GGGGAAGGTTTGGACTGGTA+AGG + tig0024372:34426-34445 Msa1416560:CDS 55.0%
GGACGCAACATCTCTCGGTT+TGG + tig0024372:34447-34466 Msa1416560:CDS 55.0%
CTCCCAGGGTAAAGTTGGAC+AGG - tig0024372:34572-34591 None:intergenic 55.0%
CTGTCCAACTTTACCCTGGG+AGG + tig0024372:34570-34589 Msa1416560:CDS 55.0%
TCCAACTTTACCCTGGGAGG+AGG + tig0024372:34573-34592 Msa1416560:CDS 55.0%
TCCTCCTCCCAGGGTAAAGT+TGG - tig0024372:34577-34596 None:intergenic 55.0%
AACTTTACCCTGGGAGGAGG+AGG + tig0024372:34576-34595 Msa1416560:CDS 55.0%
CGCTCGTGCGGTAGAATTTG+AGG - tig0024372:33148-33167 None:intergenic 55.0%
!! CACCCTACACACCGATTCAG+AGG + tig0024372:33448-33467 Msa1416560:CDS 55.0%
GAAGAGGTTCCACAGGGGAA+GGG + tig0024372:34406-34425 Msa1416560:CDS 55.0%
AAGAGGTTCCACAGGGGAAG+GGG + tig0024372:34407-34426 Msa1416560:CDS 55.0%
!! GGGGAAGGTTTGGACTGGTA+AGG + tig0024372:34426-34445 Msa1416560:CDS 55.0%
GGACGCAACATCTCTCGGTT+TGG + tig0024372:34447-34466 Msa1416560:CDS 55.0%
CTCCCAGGGTAAAGTTGGAC+AGG - tig0024372:34572-34591 None:intergenic 55.0%
CTGTCCAACTTTACCCTGGG+AGG + tig0024372:34570-34589 Msa1416560:CDS 55.0%
TCCAACTTTACCCTGGGAGG+AGG + tig0024372:34573-34592 Msa1416560:CDS 55.0%
TCCTCCTCCCAGGGTAAAGT+TGG - tig0024372:34577-34596 None:intergenic 55.0%
AACTTTACCCTGGGAGGAGG+AGG + tig0024372:34576-34595 Msa1416560:CDS 55.0%
GCGGTGATATTGCGCTCGTG+CGG - tig0024372:33160-33179 None:intergenic 60.0%
TCTGCTAGCACTCCCCTCAG+AGG + tig0024372:33373-33392 Msa1416560:CDS 60.0%
CTGCTAGCACTCCCCTCAGA+GGG + tig0024372:33374-33393 Msa1416560:CDS 60.0%
GGAAGAGGTTCCACAGGGGA+AGG + tig0024372:34405-34424 Msa1416560:CDS 60.0%
CAAACCTTCCCCTTCCCCTG+TGG - tig0024372:34418-34437 None:intergenic 60.0%
CACAGGGGAAGGGGAAGGTT+TGG + tig0024372:34416-34435 Msa1416560:CDS 60.0%
GGGAAGGGGAAGGTTTGGAC+TGG + tig0024372:34421-34440 Msa1416560:CDS 60.0%
GCGGTGATATTGCGCTCGTG+CGG - tig0024372:33160-33179 None:intergenic 60.0%
TCTGCTAGCACTCCCCTCAG+AGG + tig0024372:33373-33392 Msa1416560:CDS 60.0%
CTGCTAGCACTCCCCTCAGA+GGG + tig0024372:33374-33393 Msa1416560:CDS 60.0%
GGAAGAGGTTCCACAGGGGA+AGG + tig0024372:34405-34424 Msa1416560:CDS 60.0%
CAAACCTTCCCCTTCCCCTG+TGG - tig0024372:34418-34437 None:intergenic 60.0%
CACAGGGGAAGGGGAAGGTT+TGG + tig0024372:34416-34435 Msa1416560:CDS 60.0%
GGGAAGGGGAAGGTTTGGAC+TGG + tig0024372:34421-34440 Msa1416560:CDS 60.0%
GGTTCCACAGGGGAAGGGGA+AGG + tig0024372:34411-34430 Msa1416560:CDS 65.0%
GGTTCCACAGGGGAAGGGGA+AGG + tig0024372:34411-34430 Msa1416560:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0024372 gene 33083 34675 33083 ID=Msa1416560;Name=Msa1416560
tig0024372 mRNA 33083 34675 33083 ID=Msa1416560-mRNA-1;Parent=Msa1416560;Name=Msa1416560-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|530
tig0024372 exon 33083 34675 33083 ID=Msa1416560-mRNA-1:exon:22988;Parent=Msa1416560-mRNA-1
tig0024372 CDS 33083 34675 33083 ID=Msa1416560-mRNA-1:cds;Parent=Msa1416560-mRNA-1
Gene Sequence

>Msa1416560

ATGTCACAGCGTTCATCTCTCATGGCCGATCGCTGTATATCACCTGCTACCATTCATAAACCCCTCAAATTCTACCGCACGAGCGCAATATCACCGCCACCATCATCTTCTATTATTGATCGCTTGACATCTTCTGCTCCGATTCACAAAAAATTCAATTTGGAAGGTAAGATTTCTGGTCTGATCCACTTATTTTCCTCTTCTTCCGGCAAGGATGTTGATTATCCAACCGGAGATTTTGATTTCATTCCACACTCTGGCTTGAAGAAGTATCTGGTTCAACTTAAGACTCTGCTAGCACTCCCCTCAGAGGGTGTTAAAAACGGCAGTGTTCTTCAAATCAATTTGTCCGGCATAATATCCGACACCCTACACACCGATTCAGAGGTATTATCTCTACCTCAAATTTGCGATAATTTGTTGAAAGCCATGTATGATCCTCGTATTTATGCTGTATATCTCAATATCCAAAATTTGAACACTGGTTGGGGTAAACTAGATGAAATTCGAAGGCAAATCTTAAATTTCAGAAAATCAGGAAAACTTATCTTTGCTTATGTCCCTGAAATTGGAGTAAAAGAGTATTACGTCGCTACTGCATGTAAAGAAATATATGCCCATCCTTTTGTTGAGGTTCATTTGTATGGACCCACTGTTGACAAATTTAGTTTTATTAAGGGTGTTTATCACAACTTTGACTTTAGCCACGAGACAACAACTGCATTAATGGATAATATTTACTCAAATTGGCTAGATGTAGTATCTTCTTCCACCGGAAAGAAAAGAGAAAATGTCGAAAACTTGGTTAACTTCGTAACTGAAGGTGTCTATCAAGTAGAAGACCTCAAAGAAGAGGGTTTCATAACGGATTTACTGTATATGGATGATATTATCACCTACTTGAAGGAAAGGCTTGGGGTGAGATCACTTCCTTTTGTTTCTTTCAAAGAATACTCTCGCGTTAGTAAATCGACTGTTGGAATATCAAGGGCTGAAGAAGAACTAATAGCCATCATTCGAGTCTCAGGGTCTATCAGTAGTGCAACAGAGTTTATTGAGAATATATATAGGGTCAGAGCATCAACAGAATTCAAGGCTGTTATTGTCCGAATTGACAGTTCAGGAGGTAAATTTCGGGCATCTAATTATATGTGGAGAGAAATGAAACGTCTTGCTGCCGAAATACCCGTCATTGCTTCAATATCTGATGTGGCAACAAGTGCAGGATACTACTTAGCAACGGGAGCAGGAGCTATTGTTGCAGAAAATCTTACCTTAGTTGGTTCTTTTAGTCCAAATAATAGATCCTTTTCCAAATCAATGGAAGAGGTTCCACAGGGGAAGGGGAAGGTTTGGACTGGTAAGGACGCAACATCTCTCGGTTTGGTTGATGCTATTGGTGGGCTGTCTCGTGCTATTGCTATAGCAAAATTGAAGGCCAATATACCTCAAAATGGTGAGGTTACTCTTGTTGAACTCTCAATACCCTGTCCAACTTTACCCTGGGAGGAGGAGGAATTTAATCTTCTTTGGAAGTACCCGTTAGTGCATCCTAATCTTCTTGGTCACAACTCGTTACTGCATTATTCGTAA

Protein sequence

>Msa1416560

MSQRSSLMADRCISPATIHKPLKFYRTSAISPPPSSSIIDRLTSSAPIHKKFNLEGKISGLIHLFSSSSGKDVDYPTGDFDFIPHSGLKKYLVQLKTLLALPSEGVKNGSVLQINLSGIISDTLHTDSEVLSLPQICDNLLKAMYDPRIYAVYLNIQNLNTGWGKLDEIRRQILNFRKSGKLIFAYVPEIGVKEYYVATACKEIYAHPFVEVHLYGPTVDKFSFIKGVYHNFDFSHETTTALMDNIYSNWLDVVSSSTGKKRENVENLVNFVTEGVYQVEDLKEEGFITDLLYMDDIITYLKERLGVRSLPFVSFKEYSRVSKSTVGISRAEEELIAIIRVSGSISSATEFIENIYRVRASTEFKAVIVRIDSSGGKFRASNYMWREMKRLAAEIPVIASISDVATSAGYYLATGAGAIVAENLTLVGSFSPNNRSFSKSMEEVPQGKGKVWTGKDATSLGLVDAIGGLSRAIAIAKLKANIPQNGEVTLVELSIPCPTLPWEEEEFNLLWKYPLVHPNLLGHNSLLHYS*