Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416560 | sp|Q9C9C0|SPPA1_ARATH | 41.418 | 536 | 207 | 10 | 68 | 501 | 84 | 614 | 7.98e-113 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416560 | G7JFI3 | 78.125 | 512 | 51 | 4 | 1 | 512 | 13 | 463 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1406500 | Msa1416560 | 0.831745 | 1.402049e-55 | -8.615850e-47 |
| Msa1416540 | Msa1416560 | 0.822664 | 2.098761e-53 | -8.615850e-47 |
| Msa1416560 | Msa1416590 | 0.806961 | 6.379308e-50 | -8.615850e-47 |
| Msa1334130 | Msa1416560 | 0.996182 | 2.260565e-224 | -8.615850e-47 |
| Msa1334140 | Msa1416560 | 0.817488 | 3.212899e-52 | -8.615850e-47 |
| Msa1334160 | Msa1416560 | 0.995627 | 3.381295e-218 | -8.615850e-47 |
| Msa1334180 | Msa1416560 | 0.824985 | 5.997496e-54 | -8.615850e-47 |
| Msa1334190 | Msa1416560 | 0.806574 | 7.699645e-50 | -8.615850e-47 |
| Msa1334250 | Msa1416560 | 0.894435 | 2.473034e-75 | -8.615850e-47 |
| Msa1337970 | Msa1416560 | 0.951350 | 2.459688e-109 | -8.615850e-47 |
| Msa1222440 | Msa1416560 | 0.858245 | 9.406868e-63 | -8.615850e-47 |
| Msa1222500 | Msa1416560 | 0.830870 | 2.301684e-55 | -8.615850e-47 |
| Msa1222620 | Msa1416560 | 0.893803 | 4.473306e-75 | -8.615850e-47 |
| Msa1222630 | Msa1416560 | 0.897590 | 1.213729e-76 | -8.615850e-47 |
| Msa1222640 | Msa1416560 | 0.823091 | 1.669546e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416560 | MtrunA17_Chr4g0073611 | 88.000 | 275 | 33 | 0 | 144 | 418 | 1 | 275 | 1.26e-177 | 501 |
| Msa1416560 | MtrunA17_Chr4g0061881 | 48.671 | 602 | 188 | 14 | 13 | 501 | 3 | 596 | 3.63e-162 | 476 |
| Msa1416560 | MtrunA17_Chr2g0307851 | 46.816 | 534 | 173 | 11 | 72 | 501 | 82 | 608 | 2.01e-139 | 418 |
| Msa1416560 | MtrunA17_Chr5g0408331 | 47.006 | 334 | 116 | 10 | 74 | 402 | 35 | 312 | 3.48e-80 | 253 |
| Msa1416560 | MtrunA17_Chr5g0437391 | 43.902 | 328 | 102 | 12 | 189 | 465 | 4 | 300 | 6.72e-62 | 206 |
| Msa1416560 | MtrunA17_Chr4g0061841 | 39.274 | 303 | 72 | 7 | 145 | 415 | 9 | 231 | 8.94e-53 | 179 |
| Msa1416560 | MtrunA17_Chr4g0069071 | 34.118 | 340 | 177 | 10 | 126 | 429 | 5 | 333 | 5.18e-44 | 159 |
| Msa1416560 | MtrunA17_Chr4g0073621 | 93.056 | 72 | 5 | 0 | 441 | 512 | 6 | 77 | 1.47e-41 | 143 |
| Msa1416560 | MtrunA17_Chr4g0076571 | 64.516 | 93 | 32 | 1 | 140 | 232 | 1 | 92 | 4.31e-33 | 121 |
| Msa1416560 | MtrunA17_Chr4g0076561 | 51.389 | 144 | 60 | 4 | 303 | 437 | 2 | 144 | 4.10e-32 | 122 |
| Msa1416560 | MtrunA17_Chr8g0344851 | 47.024 | 168 | 30 | 4 | 384 | 494 | 1 | 166 | 8.04e-32 | 121 |
| Msa1416560 | MtrunA17_Chr4g0064001 | 45.732 | 164 | 35 | 5 | 408 | 523 | 3 | 160 | 1.92e-26 | 107 |
| Msa1416560 | MtrunA17_Chr5g0437441 | 55.238 | 105 | 40 | 3 | 98 | 198 | 1 | 102 | 1.10e-25 | 101 |
| Msa1416560 | MtrunA17_Chr5g0437451 | 40.761 | 184 | 66 | 8 | 313 | 490 | 2 | 148 | 2.21e-23 | 96.7 |
| Msa1416560 | MtrunA17_Chr8g0344831 | 50.435 | 115 | 53 | 2 | 297 | 408 | 8 | 121 | 7.64e-23 | 94.0 |
| Msa1416560 | MtrunA17_Chr5g0408341 | 66.667 | 60 | 18 | 1 | 441 | 500 | 1 | 58 | 4.07e-18 | 81.3 |
| Msa1416560 | MtrunA17_Chr8g0344821 | 74.074 | 54 | 12 | 1 | 441 | 494 | 56 | 107 | 1.15e-17 | 79.0 |
| Msa1416560 | MtrunA17_Chr4g0061831 | 71.698 | 53 | 13 | 1 | 441 | 493 | 66 | 116 | 1.04e-15 | 73.6 |
| Msa1416560 | MtrunA17_Chr4g0063991 | 59.701 | 67 | 23 | 2 | 313 | 376 | 2 | 67 | 1.26e-14 | 69.3 |
| Msa1416560 | MtrunA17_Chr4g0063981 | 71.429 | 35 | 10 | 0 | 174 | 208 | 1 | 35 | 3.53e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1416560 | AT1G73990.1 | 41.418 | 536 | 207 | 10 | 68 | 501 | 84 | 614 | 8.11e-114 | 352 |
| Msa1416560 | AT1G73990.2 | 45.890 | 438 | 188 | 8 | 68 | 461 | 84 | 516 | 7.64e-112 | 345 |
Find 127 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACCAGTGTTCAAATTT+TGG | 0.096910 | tig0024372:-33550 | None:intergenic |
| TTGGAAAAGGATCTATTATT+TGG | 0.128131 | tig0024372:-34376 | None:intergenic |
| CGAGACAACAACTGCATTAA+TGG | 0.184426 | tig0024372:+33790 | Msa1416560:CDS |
| TTTGCTTATGTCCCTGAAAT+TGG | 0.196065 | tig0024372:+33632 | Msa1416560:CDS |
| TGGATAATATTTACTCAAAT+TGG | 0.197209 | tig0024372:+33810 | Msa1416560:CDS |
| AATTTGGAAGGTAAGATTTC+TGG | 0.242205 | tig0024372:+33239 | Msa1416560:CDS |
| TGGAACCTCTTCCATTGATT+TGG | 0.252339 | tig0024372:-34395 | None:intergenic |
| TTTGTTGAGGTTCATTTGTA+TGG | 0.259020 | tig0024372:+33707 | Msa1416560:CDS |
| AGGAGGAATTTAATCTTCTT+TGG | 0.260660 | tig0024372:+34593 | Msa1416560:CDS |
| CTCGGTTTGGTTGATGCTAT+TGG | 0.265550 | tig0024372:+34460 | Msa1416560:CDS |
| CATAACGGATTTACTGTATA+TGG | 0.271470 | tig0024372:+33943 | Msa1416560:CDS |
| CAGTTCAGGAGGTAAATTTC+GGG | 0.292898 | tig0024372:+34198 | Msa1416560:CDS |
| TGAAGCAATGACGGGTATTT+CGG | 0.318803 | tig0024372:-34260 | None:intergenic |
| TTAGTGCATCCTAATCTTCT+TGG | 0.333889 | tig0024372:+34625 | Msa1416560:CDS |
| ACAGTTCAGGAGGTAAATTT+CGG | 0.345303 | tig0024372:+34197 | Msa1416560:CDS |
| GCAGAAAATCTTACCTTAGT+TGG | 0.347938 | tig0024372:+34343 | Msa1416560:CDS |
| ATCTTAAATTTCAGAAAATC+AGG | 0.347978 | tig0024372:+33599 | Msa1416560:CDS |
| CCAAAATTTGAACACTGGTT+GGG | 0.355126 | tig0024372:+33550 | Msa1416560:CDS |
| ATAGCCATCATTCGAGTCTC+AGG | 0.356408 | tig0024372:+34088 | Msa1416560:CDS |
| CACAGGGGAAGGGGAAGGTT+TGG | 0.359665 | tig0024372:+34416 | Msa1416560:CDS |
| TTATGAAACCCTCTTCTTTG+AGG | 0.367459 | tig0024372:-33925 | None:intergenic |
| AGTTTATTGAGAATATATAT+AGG | 0.377641 | tig0024372:+34131 | Msa1416560:CDS |
| AAGGCCAATATACCTCAAAA+TGG | 0.388556 | tig0024372:+34517 | Msa1416560:CDS |
| CTCTGGCTTGAAGAAGTATC+TGG | 0.400164 | tig0024372:+33337 | Msa1416560:CDS |
| CTCTTCCATTGATTTGGAAA+AGG | 0.400283 | tig0024372:-34389 | None:intergenic |
| ATTGTCCGAATTGACAGTTC+AGG | 0.411636 | tig0024372:+34184 | Msa1416560:CDS |
| CCTACTTGAAGGAAAGGCTT+GGG | 0.430422 | tig0024372:+33978 | Msa1416560:CDS |
| TGGATAATCAACATCCTTGC+CGG | 0.434812 | tig0024372:-33288 | None:intergenic |
| GTTTATTGAGAATATATATA+GGG | 0.435192 | tig0024372:+34132 | Msa1416560:CDS |
| TCCAAAATTTGAACACTGGT+TGG | 0.435258 | tig0024372:+33549 | Msa1416560:CDS |
| GCTCGTGCGGTAGAATTTGA+GGG | 0.437753 | tig0024372:-33144 | None:intergenic |
| TACCTCCTGAACTGTCAATT+CGG | 0.443292 | tig0024372:-34189 | None:intergenic |
| GTTCTTCAAATCAATTTGTC+CGG | 0.445006 | tig0024372:+33413 | Msa1416560:CDS |
| TCCTCCTCCCAGGGTAAAGT+TGG | 0.446367 | tig0024372:-34574 | None:intergenic |
| GAATTTGAGGGGTTTATGAA+TGG | 0.450237 | tig0024372:-33132 | None:intergenic |
| CTCCCAGGGTAAAGTTGGAC+AGG | 0.450486 | tig0024372:-34569 | None:intergenic |
| TACAAATGAACCTCAACAAA+AGG | 0.456509 | tig0024372:-33704 | None:intergenic |
| CAAAATTTGAACACTGGTTG+GGG | 0.459205 | tig0024372:+33551 | Msa1416560:CDS |
| GGAAGAGGTTCCACAGGGGA+AGG | 0.463372 | tig0024372:+34405 | Msa1416560:CDS |
| AAGAGGTTCCACAGGGGAAG+GGG | 0.467563 | tig0024372:+34407 | Msa1416560:CDS |
| ATTAAATTCCTCCTCCTCCC+AGG | 0.476401 | tig0024372:-34584 | None:intergenic |
| AGGGGTTTATGAATGGTAGC+AGG | 0.476548 | tig0024372:-33125 | None:intergenic |
| AAGAGAAAATGTCGAAAACT+TGG | 0.476552 | tig0024372:+33865 | Msa1416560:CDS |
| AAGGATGTTGATTATCCAAC+CGG | 0.477750 | tig0024372:+33293 | Msa1416560:CDS |
| TGATATTATCACCTACTTGA+AGG | 0.483027 | tig0024372:+33967 | Msa1416560:CDS |
| CAGAGCATCAACAGAATTCA+AGG | 0.483419 | tig0024372:+34156 | Msa1416560:CDS |
| AACTTTACCCTGGGAGGAGG+AGG | 0.483757 | tig0024372:+34576 | Msa1416560:CDS |
| GCAGGATACTACTTAGCAAC+GGG | 0.485513 | tig0024372:+34304 | Msa1416560:CDS |
| GAGTTGTGACCAAGAAGATT+AGG | 0.486888 | tig0024372:-34634 | None:intergenic |
| TACTACTTAGCAACGGGAGC+AGG | 0.490304 | tig0024372:+34310 | Msa1416560:CDS |
| GGACGCAACATCTCTCGGTT+TGG | 0.491111 | tig0024372:+34447 | Msa1416560:CDS |
| CGTTACTGCATTATTCGTAA+AGG | 0.491356 | tig0024372:+34656 | Msa1416560:CDS |
| TTCGGGCATCTAATTATATG+TGG | 0.492637 | tig0024372:+34215 | Msa1416560:CDS |
| TCTGATGTGGCAACAAGTGC+AGG | 0.494828 | tig0024372:+34286 | Msa1416560:CDS |
| AACAAATTATCGCAAATTTG+AGG | 0.494896 | tig0024372:-33482 | None:intergenic |
| CAAAGAAGAGGGTTTCATAA+CGG | 0.495857 | tig0024372:+33928 | Msa1416560:CDS |
| AATCGACTGTTGGAATATCA+AGG | 0.496160 | tig0024372:+34050 | Msa1416560:CDS |
| TATTGCTATAGCAAAATTGA+AGG | 0.500409 | tig0024372:+34498 | Msa1416560:CDS |
| TACCTCTGAATCGGTGTGTA+GGG | 0.501142 | tig0024372:-33450 | None:intergenic |
| CGCGTTAGTAAATCGACTGT+TGG | 0.501184 | tig0024372:+34040 | Msa1416560:CDS |
| ATCAATGGAAGAGGTTCCAC+AGG | 0.501640 | tig0024372:+34399 | Msa1416560:CDS |
| TAGAGATAATACCTCTGAAT+CGG | 0.505324 | tig0024372:-33459 | None:intergenic |
| GAAGATTAGGATGCACTAAC+GGG | 0.506538 | tig0024372:-34621 | None:intergenic |
| ACCTACTTGAAGGAAAGGCT+TGG | 0.508749 | tig0024372:+33977 | Msa1416560:CDS |
| TTTGATTTCATTCCACACTC+TGG | 0.514952 | tig0024372:+33320 | Msa1416560:CDS |
| GAAGAGGTTCCACAGGGGAA+GGG | 0.517831 | tig0024372:+34406 | Msa1416560:CDS |
| TGGAATGAAATCAAAATCTC+CGG | 0.524479 | tig0024372:-33312 | None:intergenic |
| TTATCACCTACTTGAAGGAA+AGG | 0.529131 | tig0024372:+33972 | Msa1416560:CDS |
| AACATCCTTGCCGGAAGAAG+AGG | 0.530642 | tig0024372:-33279 | None:intergenic |
| GGTTCCACAGGGGAAGGGGA+AGG | 0.533194 | tig0024372:+34411 | Msa1416560:CDS |
| ATCAGATATTGAAGCAATGA+CGG | 0.536024 | tig0024372:-34269 | None:intergenic |
| GGTTTGGTTGATGCTATTGG+TGG | 0.540573 | tig0024372:+34463 | Msa1416560:CDS |
| TATTCTTTGAAAGAAACAAA+AGG | 0.543012 | tig0024372:-34013 | None:intergenic |
| AAACTAAATTTGTCAACAGT+GGG | 0.543801 | tig0024372:-33731 | None:intergenic |
| TGGACTAAAAGAACCAACTA+AGG | 0.544447 | tig0024372:-34356 | None:intergenic |
| AGAAGATTAGGATGCACTAA+CGG | 0.547063 | tig0024372:-34622 | None:intergenic |
| AATATCCAAAATTTGAACAC+TGG | 0.547788 | tig0024372:+33545 | Msa1416560:CDS |
| ATACCTCTGAATCGGTGTGT+AGG | 0.552557 | tig0024372:-33451 | None:intergenic |
| GTTTGGTTGATGCTATTGGT+GGG | 0.556402 | tig0024372:+34464 | Msa1416560:CDS |
| TTGGTTAACTTCGTAACTGA+AGG | 0.556482 | tig0024372:+33884 | Msa1416560:CDS |
| GGTAAGGACGCAACATCTCT+CGG | 0.557645 | tig0024372:+34442 | Msa1416560:CDS |
| CACCCTACACACCGATTCAG+AGG | 0.558538 | tig0024372:+33448 | Msa1416560:CDS |
| TACCCTGTCCAACTTTACCC+TGG | 0.561366 | tig0024372:+34566 | Msa1416560:CDS |
| TGAATCGGTGTGTAGGGTGT+CGG | 0.562552 | tig0024372:-33444 | None:intergenic |
| TCCAACTTTACCCTGGGAGG+AGG | 0.565785 | tig0024372:+34573 | Msa1416560:CDS |
| GATGTAGTATCTTCTTCCAC+CGG | 0.568021 | tig0024372:+33836 | Msa1416560:CDS |
| AGTAGAAGACCTCAAAGAAG+AGG | 0.568425 | tig0024372:+33916 | Msa1416560:CDS |
| GTCACAGCGTTCATCTCTCA+TGG | 0.568866 | tig0024372:+33085 | Msa1416560:CDS |
| AGACCCTGAGACTCGAATGA+TGG | 0.571972 | tig0024372:-34092 | None:intergenic |
| AATGAACCTCAACAAAAGGA+TGG | 0.572223 | tig0024372:-33700 | None:intergenic |
| CTCGTGCGGTAGAATTTGAG+GGG | 0.580670 | tig0024372:-33143 | None:intergenic |
| TCAGATATTGAAGCAATGAC+GGG | 0.581772 | tig0024372:-34268 | None:intergenic |
| CTGCTAGCACTCCCCTCAGA+GGG | 0.583729 | tig0024372:+33374 | Msa1416560:CDS |
| ACCCTGTCCAACTTTACCCT+GGG | 0.586996 | tig0024372:+34567 | Msa1416560:CDS |
| AGCAGGTGATATACAGCGAT+CGG | 0.592109 | tig0024372:-33108 | None:intergenic |
| TAGGGTGTCGGATATTATGC+CGG | 0.594782 | tig0024372:-33432 | None:intergenic |
| ATGAAATCAAAATCTCCGGT+TGG | 0.594805 | tig0024372:-33308 | None:intergenic |
| TACTTCTTCAAGCCAGAGTG+TGG | 0.594882 | tig0024372:-33332 | None:intergenic |
| GTAGAAGACCTCAAAGAAGA+GGG | 0.597121 | tig0024372:+33917 | Msa1416560:CDS |
| TTAATGCAGTTGTTGTCTCG+TGG | 0.598388 | tig0024372:-33787 | None:intergenic |
| ATCGACTGTTGGAATATCAA+GGG | 0.598413 | tig0024372:+34051 | Msa1416560:CDS |
| AAAACTAAATTTGTCAACAG+TGG | 0.601150 | tig0024372:-33732 | None:intergenic |
| CATTGCTTCAATATCTGATG+TGG | 0.601190 | tig0024372:+34273 | Msa1416560:CDS |
| TTAAATTCCTCCTCCTCCCA+GGG | 0.602774 | tig0024372:-34583 | None:intergenic |
| ATGAACCTCAACAAAAGGAT+GGG | 0.602807 | tig0024372:-33699 | None:intergenic |
| GGGGAAGGTTTGGACTGGTA+AGG | 0.604771 | tig0024372:+34426 | Msa1416560:CDS |
| TAGCCATCATTCGAGTCTCA+GGG | 0.606571 | tig0024372:+34089 | Msa1416560:CDS |
| CGATCAATAATAGAAGATGA+TGG | 0.608918 | tig0024372:-33182 | None:intergenic |
| TGCAGGATACTACTTAGCAA+CGG | 0.610387 | tig0024372:+34303 | Msa1416560:CDS |
| CGGAAGAAGAGGAAAATAAG+TGG | 0.613550 | tig0024372:-33268 | None:intergenic |
| CCCAAGCCTTTCCTTCAAGT+AGG | 0.616569 | tig0024372:-33978 | None:intergenic |
| ATAATAGAAGATGATGGTGG+CGG | 0.619265 | tig0024372:-33176 | None:intergenic |
| GTAAACTAGATGAAATTCGA+AGG | 0.619983 | tig0024372:+33573 | Msa1416560:CDS |
| GTCCGAATTGACAGTTCAGG+AGG | 0.622572 | tig0024372:+34187 | Msa1416560:CDS |
| CTACTTGAAGGAAAGGCTTG+GGG | 0.625623 | tig0024372:+33979 | Msa1416560:CDS |
| GGGAAGGGGAAGGTTTGGAC+TGG | 0.637451 | tig0024372:+34421 | Msa1416560:CDS |
| CAAACCTTCCCCTTCCCCTG+TGG | 0.650489 | tig0024372:-34415 | None:intergenic |
| TCCCAGGGTAAAGTTGGACA+GGG | 0.658955 | tig0024372:-34568 | None:intergenic |
| ATAAATACGAGGATCATACA+TGG | 0.660349 | tig0024372:-33510 | None:intergenic |
| CAATATACCTCAAAATGGTG+AGG | 0.660377 | tig0024372:+34522 | Msa1416560:CDS |
| CTGTCCAACTTTACCCTGGG+AGG | 0.667967 | tig0024372:+34570 | Msa1416560:CDS |
| TCAATGGAAGAGGTTCCACA+GGG | 0.668896 | tig0024372:+34400 | Msa1416560:CDS |
| TCTGCTAGCACTCCCCTCAG+AGG | 0.672433 | tig0024372:+33373 | Msa1416560:CDS |
| GCGGTGATATTGCGCTCGTG+CGG | 0.694021 | tig0024372:-33157 | None:intergenic |
| TCAATAATAGAAGATGATGG+TGG | 0.696702 | tig0024372:-33179 | None:intergenic |
| AGATATACAGCATAAATACG+AGG | 0.747490 | tig0024372:-33521 | None:intergenic |
| CAATGGAAGAGGTTCCACAG+GGG | 0.794420 | tig0024372:+34401 | Msa1416560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGAATTTTTTGTGAAT+CGG | - | tig0024372:33224-33243 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | + | tig0024372:33739-33758 | Msa1416560:CDS | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | + | tig0024372:33740-33759 | Msa1416560:CDS | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | + | tig0024372:34131-34150 | Msa1416560:CDS | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | + | tig0024372:34132-34151 | Msa1416560:CDS | 15.0% |
| !!! | AAATTGAATTTTTTGTGAAT+CGG | - | tig0024372:33224-33243 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | + | tig0024372:33739-33758 | Msa1416560:CDS | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | + | tig0024372:33740-33759 | Msa1416560:CDS | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | + | tig0024372:34131-34150 | Msa1416560:CDS | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | + | tig0024372:34132-34151 | Msa1416560:CDS | 15.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | + | tig0024372:33223-33242 | Msa1416560:CDS | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | + | tig0024372:33599-33618 | Msa1416560:CDS | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | + | tig0024372:33810-33829 | Msa1416560:CDS | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | - | tig0024372:34016-34035 | None:intergenic | 20.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | + | tig0024372:33223-33242 | Msa1416560:CDS | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | + | tig0024372:33599-33618 | Msa1416560:CDS | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | + | tig0024372:33810-33829 | Msa1416560:CDS | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | - | tig0024372:34016-34035 | None:intergenic | 20.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | + | tig0024372:33227-33246 | Msa1416560:CDS | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | - | tig0024372:33485-33504 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | + | tig0024372:33545-33564 | Msa1416560:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | - | tig0024372:33734-33753 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | - | tig0024372:33735-33754 | None:intergenic | 25.0% |
| ! | TTGGAAAAGGATCTATTATT+TGG | - | tig0024372:34379-34398 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | + | tig0024372:34498-34517 | Msa1416560:CDS | 25.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | + | tig0024372:33227-33246 | Msa1416560:CDS | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | - | tig0024372:33485-33504 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | + | tig0024372:33545-33564 | Msa1416560:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | - | tig0024372:33734-33753 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | - | tig0024372:33735-33754 | None:intergenic | 25.0% |
| ! | TTGGAAAAGGATCTATTATT+TGG | - | tig0024372:34379-34398 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | + | tig0024372:34498-34517 | Msa1416560:CDS | 25.0% |
| ! | TCAATAATAGAAGATGATGG+TGG | - | tig0024372:33182-33201 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | - | tig0024372:33185-33204 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | + | tig0024372:33239-33258 | Msa1416560:CDS | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | - | tig0024372:33315-33334 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | + | tig0024372:33413-33432 | Msa1416560:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | - | tig0024372:33462-33481 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | - | tig0024372:33513-33532 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | - | tig0024372:33524-33543 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | + | tig0024372:33573-33592 | Msa1416560:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | - | tig0024372:33646-33665 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | - | tig0024372:33647-33666 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | - | tig0024372:33707-33726 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | + | tig0024372:33707-33726 | Msa1416560:CDS | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | - | tig0024372:33858-33877 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | + | tig0024372:33865-33884 | Msa1416560:CDS | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | + | tig0024372:33943-33962 | Msa1416560:CDS | 30.0% |
| TGATATTATCACCTACTTGA+AGG | + | tig0024372:33967-33986 | Msa1416560:CDS | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | - | tig0024372:34272-34291 | None:intergenic | 30.0% | |
| ! | TAGATCCTTTTCCAAATCAA+TGG | + | tig0024372:34384-34403 | Msa1416560:CDS | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | + | tig0024372:34593-34612 | Msa1416560:CDS | 30.0% | |
| ! | TCAATAATAGAAGATGATGG+TGG | - | tig0024372:33182-33201 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | - | tig0024372:33185-33204 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | + | tig0024372:33239-33258 | Msa1416560:CDS | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | - | tig0024372:33315-33334 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | + | tig0024372:33413-33432 | Msa1416560:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | - | tig0024372:33462-33481 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | - | tig0024372:33513-33532 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | - | tig0024372:33524-33543 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | + | tig0024372:33573-33592 | Msa1416560:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | - | tig0024372:33646-33665 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | - | tig0024372:33647-33666 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | - | tig0024372:33707-33726 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | + | tig0024372:33707-33726 | Msa1416560:CDS | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | - | tig0024372:33858-33877 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | + | tig0024372:33865-33884 | Msa1416560:CDS | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | + | tig0024372:33943-33962 | Msa1416560:CDS | 30.0% |
| TGATATTATCACCTACTTGA+AGG | + | tig0024372:33967-33986 | Msa1416560:CDS | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | - | tig0024372:34272-34291 | None:intergenic | 30.0% | |
| ! | TAGATCCTTTTCCAAATCAA+TGG | + | tig0024372:34384-34403 | Msa1416560:CDS | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | + | tig0024372:34593-34612 | Msa1416560:CDS | 30.0% | |
| GAATTTGAGGGGTTTATGAA+TGG | - | tig0024372:33135-33154 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | - | tig0024372:33179-33198 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | + | tig0024372:33269-33288 | Msa1416560:CDS | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | + | tig0024372:33293-33312 | Msa1416560:CDS | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | - | tig0024372:33311-33330 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | + | tig0024372:33320-33339 | Msa1416560:CDS | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | + | tig0024372:33549-33568 | Msa1416560:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | + | tig0024372:33550-33569 | Msa1416560:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | + | tig0024372:33551-33570 | Msa1416560:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | + | tig0024372:33632-33651 | Msa1416560:CDS | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | - | tig0024372:33702-33721 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | - | tig0024372:33703-33722 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | - | tig0024372:33855-33874 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | + | tig0024372:33884-33903 | Msa1416560:CDS | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | - | tig0024372:33928-33947 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | + | tig0024372:33928-33947 | Msa1416560:CDS | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | + | tig0024372:33972-33991 | Msa1416560:CDS | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | + | tig0024372:34050-34069 | Msa1416560:CDS | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | + | tig0024372:34051-34070 | Msa1416560:CDS | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | + | tig0024372:34197-34216 | Msa1416560:CDS | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | + | tig0024372:34215-34234 | Msa1416560:CDS | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | - | tig0024372:34271-34290 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | + | tig0024372:34273-34292 | Msa1416560:CDS | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | + | tig0024372:34343-34362 | Msa1416560:CDS | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | - | tig0024372:34359-34378 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | - | tig0024372:34392-34411 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | + | tig0024372:34390-34409 | Msa1416560:CDS | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | + | tig0024372:34517-34536 | Msa1416560:CDS | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | - | tig0024372:34524-34543 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | + | tig0024372:34522-34541 | Msa1416560:CDS | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | - | tig0024372:34625-34644 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | + | tig0024372:34625-34644 | Msa1416560:CDS | 35.0% | |
| GAATTTGAGGGGTTTATGAA+TGG | - | tig0024372:33135-33154 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | - | tig0024372:33179-33198 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | + | tig0024372:33269-33288 | Msa1416560:CDS | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | + | tig0024372:33293-33312 | Msa1416560:CDS | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | - | tig0024372:33311-33330 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | + | tig0024372:33320-33339 | Msa1416560:CDS | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | + | tig0024372:33549-33568 | Msa1416560:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | + | tig0024372:33550-33569 | Msa1416560:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | + | tig0024372:33551-33570 | Msa1416560:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | + | tig0024372:33632-33651 | Msa1416560:CDS | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | - | tig0024372:33702-33721 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | - | tig0024372:33703-33722 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | - | tig0024372:33855-33874 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | + | tig0024372:33884-33903 | Msa1416560:CDS | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | - | tig0024372:33928-33947 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | + | tig0024372:33928-33947 | Msa1416560:CDS | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | + | tig0024372:33972-33991 | Msa1416560:CDS | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | + | tig0024372:34050-34069 | Msa1416560:CDS | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | + | tig0024372:34051-34070 | Msa1416560:CDS | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | + | tig0024372:34197-34216 | Msa1416560:CDS | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | + | tig0024372:34215-34234 | Msa1416560:CDS | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | - | tig0024372:34271-34290 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | + | tig0024372:34273-34292 | Msa1416560:CDS | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | + | tig0024372:34343-34362 | Msa1416560:CDS | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | - | tig0024372:34359-34378 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | - | tig0024372:34392-34411 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | + | tig0024372:34390-34409 | Msa1416560:CDS | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | + | tig0024372:34517-34536 | Msa1416560:CDS | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | - | tig0024372:34524-34543 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | + | tig0024372:34522-34541 | Msa1416560:CDS | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | - | tig0024372:34625-34644 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | + | tig0024372:34625-34644 | Msa1416560:CDS | 35.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | - | tig0024372:33271-33290 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | - | tig0024372:33291-33310 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | - | tig0024372:33553-33572 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | + | tig0024372:33694-33713 | Msa1416560:CDS | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | - | tig0024372:33790-33809 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | + | tig0024372:33790-33809 | Msa1416560:CDS | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | + | tig0024372:33836-33855 | Msa1416560:CDS | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | + | tig0024372:33916-33935 | Msa1416560:CDS | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | + | tig0024372:33917-33936 | Msa1416560:CDS | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | + | tig0024372:34156-34175 | Msa1416560:CDS | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | + | tig0024372:34184-34203 | Msa1416560:CDS | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | - | tig0024372:34192-34211 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | + | tig0024372:34198-34217 | Msa1416560:CDS | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | - | tig0024372:34263-34282 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | + | tig0024372:34303-34322 | Msa1416560:CDS | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | - | tig0024372:34398-34417 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | + | tig0024372:34464-34483 | Msa1416560:CDS | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | - | tig0024372:34532-34551 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | - | tig0024372:34624-34643 | None:intergenic | 40.0% | |
| GAGTTGTGACCAAGAAGATT+AGG | - | tig0024372:34637-34656 | None:intergenic | 40.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | - | tig0024372:33271-33290 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | - | tig0024372:33291-33310 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | - | tig0024372:33553-33572 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | + | tig0024372:33694-33713 | Msa1416560:CDS | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | - | tig0024372:33790-33809 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | + | tig0024372:33790-33809 | Msa1416560:CDS | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | + | tig0024372:33836-33855 | Msa1416560:CDS | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | + | tig0024372:33916-33935 | Msa1416560:CDS | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | + | tig0024372:33917-33936 | Msa1416560:CDS | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | + | tig0024372:34156-34175 | Msa1416560:CDS | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | + | tig0024372:34184-34203 | Msa1416560:CDS | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | - | tig0024372:34192-34211 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | + | tig0024372:34198-34217 | Msa1416560:CDS | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | - | tig0024372:34263-34282 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | + | tig0024372:34303-34322 | Msa1416560:CDS | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | - | tig0024372:34398-34417 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | + | tig0024372:34464-34483 | Msa1416560:CDS | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | - | tig0024372:34532-34551 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | - | tig0024372:34624-34643 | None:intergenic | 40.0% | |
| GAGTTGTGACCAAGAAGATT+AGG | - | tig0024372:34637-34656 | None:intergenic | 40.0% | |
| AGCAGGTGATATACAGCGAT+CGG | - | tig0024372:33111-33130 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | - | tig0024372:33128-33147 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | + | tig0024372:33274-33293 | Msa1416560:CDS | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | - | tig0024372:33335-33354 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | + | tig0024372:33337-33356 | Msa1416560:CDS | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | - | tig0024372:33388-33407 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | - | tig0024372:33389-33408 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | + | tig0024372:33386-33405 | Msa1416560:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | - | tig0024372:33435-33454 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | - | tig0024372:33453-33472 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | - | tig0024372:33454-33473 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | + | tig0024372:33977-33996 | Msa1416560:CDS | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | + | tig0024372:33978-33997 | Msa1416560:CDS | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | + | tig0024372:33979-33998 | Msa1416560:CDS | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | + | tig0024372:34040-34059 | Msa1416560:CDS | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | + | tig0024372:34088-34107 | Msa1416560:CDS | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | + | tig0024372:34089-34108 | Msa1416560:CDS | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | + | tig0024372:34304-34323 | Msa1416560:CDS | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | + | tig0024372:34399-34418 | Msa1416560:CDS | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | + | tig0024372:34400-34419 | Msa1416560:CDS | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | + | tig0024372:34460-34479 | Msa1416560:CDS | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | + | tig0024372:34463-34482 | Msa1416560:CDS | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | - | tig0024372:34586-34605 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | - | tig0024372:34587-34606 | None:intergenic | 45.0% | |
| AGCAGGTGATATACAGCGAT+CGG | - | tig0024372:33111-33130 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | - | tig0024372:33128-33147 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | + | tig0024372:33274-33293 | Msa1416560:CDS | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | - | tig0024372:33335-33354 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | + | tig0024372:33337-33356 | Msa1416560:CDS | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | - | tig0024372:33388-33407 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | - | tig0024372:33389-33408 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | + | tig0024372:33386-33405 | Msa1416560:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | - | tig0024372:33435-33454 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | - | tig0024372:33453-33472 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | - | tig0024372:33454-33473 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | + | tig0024372:33977-33996 | Msa1416560:CDS | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | + | tig0024372:33978-33997 | Msa1416560:CDS | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | + | tig0024372:33979-33998 | Msa1416560:CDS | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | + | tig0024372:34040-34059 | Msa1416560:CDS | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | + | tig0024372:34088-34107 | Msa1416560:CDS | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | + | tig0024372:34089-34108 | Msa1416560:CDS | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | + | tig0024372:34304-34323 | Msa1416560:CDS | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | + | tig0024372:34399-34418 | Msa1416560:CDS | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | + | tig0024372:34400-34419 | Msa1416560:CDS | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | + | tig0024372:34460-34479 | Msa1416560:CDS | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | + | tig0024372:34463-34482 | Msa1416560:CDS | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | - | tig0024372:34586-34605 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | - | tig0024372:34587-34606 | None:intergenic | 45.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | + | tig0024372:33085-33104 | Msa1416560:CDS | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | - | tig0024372:33146-33165 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | - | tig0024372:33147-33166 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | - | tig0024372:33282-33301 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | - | tig0024372:33390-33409 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | - | tig0024372:33447-33466 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | - | tig0024372:33981-34000 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | - | tig0024372:34095-34114 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | + | tig0024372:34187-34206 | Msa1416560:CDS | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | + | tig0024372:34286-34305 | Msa1416560:CDS | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | + | tig0024372:34310-34329 | Msa1416560:CDS | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | + | tig0024372:34401-34420 | Msa1416560:CDS | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | + | tig0024372:34442-34461 | Msa1416560:CDS | 50.0% | |
| TACCCTGTCCAACTTTACCC+TGG | + | tig0024372:34566-34585 | Msa1416560:CDS | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | + | tig0024372:34567-34586 | Msa1416560:CDS | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | - | tig0024372:34571-34590 | None:intergenic | 50.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | + | tig0024372:33085-33104 | Msa1416560:CDS | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | - | tig0024372:33146-33165 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | - | tig0024372:33147-33166 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | - | tig0024372:33282-33301 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | - | tig0024372:33390-33409 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | - | tig0024372:33447-33466 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | - | tig0024372:33981-34000 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | - | tig0024372:34095-34114 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | + | tig0024372:34187-34206 | Msa1416560:CDS | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | + | tig0024372:34286-34305 | Msa1416560:CDS | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | + | tig0024372:34310-34329 | Msa1416560:CDS | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | + | tig0024372:34401-34420 | Msa1416560:CDS | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | + | tig0024372:34442-34461 | Msa1416560:CDS | 50.0% | |
| TACCCTGTCCAACTTTACCC+TGG | + | tig0024372:34566-34585 | Msa1416560:CDS | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | + | tig0024372:34567-34586 | Msa1416560:CDS | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | - | tig0024372:34571-34590 | None:intergenic | 50.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | - | tig0024372:33148-33167 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | + | tig0024372:33448-33467 | Msa1416560:CDS | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | + | tig0024372:34406-34425 | Msa1416560:CDS | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | + | tig0024372:34407-34426 | Msa1416560:CDS | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | + | tig0024372:34426-34445 | Msa1416560:CDS | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | + | tig0024372:34447-34466 | Msa1416560:CDS | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | - | tig0024372:34572-34591 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | + | tig0024372:34570-34589 | Msa1416560:CDS | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | + | tig0024372:34573-34592 | Msa1416560:CDS | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | - | tig0024372:34577-34596 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | + | tig0024372:34576-34595 | Msa1416560:CDS | 55.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | - | tig0024372:33148-33167 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | + | tig0024372:33448-33467 | Msa1416560:CDS | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | + | tig0024372:34406-34425 | Msa1416560:CDS | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | + | tig0024372:34407-34426 | Msa1416560:CDS | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | + | tig0024372:34426-34445 | Msa1416560:CDS | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | + | tig0024372:34447-34466 | Msa1416560:CDS | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | - | tig0024372:34572-34591 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | + | tig0024372:34570-34589 | Msa1416560:CDS | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | + | tig0024372:34573-34592 | Msa1416560:CDS | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | - | tig0024372:34577-34596 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | + | tig0024372:34576-34595 | Msa1416560:CDS | 55.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | - | tig0024372:33160-33179 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | + | tig0024372:33373-33392 | Msa1416560:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | + | tig0024372:33374-33393 | Msa1416560:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | + | tig0024372:34405-34424 | Msa1416560:CDS | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | - | tig0024372:34418-34437 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | + | tig0024372:34416-34435 | Msa1416560:CDS | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | + | tig0024372:34421-34440 | Msa1416560:CDS | 60.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | - | tig0024372:33160-33179 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | + | tig0024372:33373-33392 | Msa1416560:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | + | tig0024372:33374-33393 | Msa1416560:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | + | tig0024372:34405-34424 | Msa1416560:CDS | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | - | tig0024372:34418-34437 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | + | tig0024372:34416-34435 | Msa1416560:CDS | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | + | tig0024372:34421-34440 | Msa1416560:CDS | 60.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | + | tig0024372:34411-34430 | Msa1416560:CDS | 65.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | + | tig0024372:34411-34430 | Msa1416560:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024372 | gene | 33083 | 34675 | 33083 | ID=Msa1416560;Name=Msa1416560 |
| tig0024372 | mRNA | 33083 | 34675 | 33083 | ID=Msa1416560-mRNA-1;Parent=Msa1416560;Name=Msa1416560-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|530 |
| tig0024372 | exon | 33083 | 34675 | 33083 | ID=Msa1416560-mRNA-1:exon:22988;Parent=Msa1416560-mRNA-1 |
| tig0024372 | CDS | 33083 | 34675 | 33083 | ID=Msa1416560-mRNA-1:cds;Parent=Msa1416560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
