Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334130 | XP_024636611.1 | 81.888 | 519 | 45 | 5 | 1 | 512 | 1 | 477 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334130 | sp|Q9C9C0|SPPA1_ARATH | 39.696 | 592 | 236 | 13 | 24 | 501 | 30 | 614 | 1.65e-109 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334130 | G7JFI3 | 78.125 | 512 | 51 | 4 | 1 | 512 | 13 | 463 | 0.0 | 757 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1334130 | Msa1334140 | 0.812867 | 3.415418e-51 | -8.615850e-47 |
| Msa1334130 | Msa1334160 | 0.997137 | 1.788873e-237 | -8.615850e-47 |
| Msa1334130 | Msa1334180 | 0.823292 | 1.497925e-53 | -8.615850e-47 |
| Msa1334130 | Msa1334190 | 0.810092 | 1.368541e-50 | -8.615850e-47 |
| Msa1334130 | Msa1334250 | 0.893852 | 4.272300e-75 | -8.615850e-47 |
| Msa1334130 | Msa1337970 | 0.949549 | 1.016181e-107 | -8.615850e-47 |
| Msa1334130 | Msa1406500 | 0.828594 | 8.242072e-55 | -8.615850e-47 |
| Msa1334130 | Msa1416540 | 0.819561 | 1.088846e-52 | -8.615850e-47 |
| Msa1334130 | Msa1416560 | 0.996182 | 2.260565e-224 | -8.615850e-47 |
| Msa1334130 | Msa1416590 | 0.801825 | 7.501494e-49 | -8.615850e-47 |
| Msa1222440 | Msa1334130 | 0.855048 | 8.190402e-62 | -8.615850e-47 |
| Msa1222500 | Msa1334130 | 0.835613 | 1.515513e-56 | -8.615850e-47 |
| Msa1222620 | Msa1334130 | 0.892058 | 2.252174e-74 | -8.615850e-47 |
| Msa1222630 | Msa1334130 | 0.897610 | 1.190200e-76 | -8.615850e-47 |
| Msa1222640 | Msa1334130 | 0.820549 | 6.468521e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334130 | MtrunA17_Chr4g0073611 | 88.000 | 275 | 33 | 0 | 144 | 418 | 1 | 275 | 7.79e-174 | 499 |
| Msa1334130 | MtrunA17_Chr4g0061881 | 48.671 | 602 | 188 | 14 | 13 | 501 | 3 | 596 | 1.43e-158 | 474 |
| Msa1334130 | MtrunA17_Chr2g0307851 | 46.816 | 534 | 173 | 11 | 72 | 501 | 82 | 608 | 2.05e-135 | 414 |
| Msa1334130 | MtrunA17_Chr5g0408331 | 47.006 | 334 | 116 | 10 | 74 | 402 | 35 | 312 | 1.46e-77 | 251 |
| Msa1334130 | MtrunA17_Chr5g0437391 | 43.902 | 328 | 102 | 12 | 189 | 465 | 4 | 300 | 3.78e-60 | 206 |
| Msa1334130 | MtrunA17_Chr4g0061841 | 39.274 | 303 | 72 | 7 | 145 | 415 | 9 | 231 | 3.04e-51 | 178 |
| Msa1334130 | MtrunA17_Chr4g0073431 | 64.430 | 149 | 14 | 3 | 574 | 722 | 60 | 169 | 8.60e-43 | 152 |
| Msa1334130 | MtrunA17_Chr4g0069071 | 34.118 | 340 | 177 | 10 | 126 | 429 | 5 | 333 | 1.25e-42 | 158 |
| Msa1334130 | MtrunA17_Chr4g0073621 | 93.056 | 72 | 5 | 0 | 441 | 512 | 6 | 77 | 6.16e-41 | 144 |
| Msa1334130 | MtrunA17_Chr4g0076571 | 64.516 | 93 | 32 | 1 | 140 | 232 | 1 | 92 | 2.50e-32 | 120 |
| Msa1334130 | MtrunA17_Chr4g0076561 | 51.389 | 144 | 60 | 4 | 303 | 437 | 2 | 144 | 1.52e-31 | 121 |
| Msa1334130 | MtrunA17_Chr8g0344851 | 47.024 | 168 | 30 | 4 | 384 | 494 | 1 | 166 | 2.43e-31 | 120 |
| Msa1334130 | MtrunA17_Chr4g0064001 | 50.000 | 142 | 21 | 4 | 408 | 501 | 3 | 142 | 3.97e-26 | 107 |
| Msa1334130 | MtrunA17_Chr5g0437441 | 55.238 | 105 | 40 | 3 | 98 | 198 | 1 | 102 | 3.04e-25 | 100 |
| Msa1334130 | MtrunA17_Chr5g0437451 | 40.761 | 184 | 66 | 8 | 313 | 490 | 2 | 148 | 6.35e-23 | 95.9 |
| Msa1334130 | MtrunA17_Chr8g0344831 | 50.435 | 115 | 53 | 2 | 297 | 408 | 8 | 121 | 1.79e-22 | 93.2 |
| Msa1334130 | MtrunA17_Chr5g0408341 | 66.667 | 60 | 18 | 1 | 441 | 500 | 1 | 58 | 6.19e-18 | 80.9 |
| Msa1334130 | MtrunA17_Chr8g0344821 | 74.074 | 54 | 12 | 1 | 441 | 494 | 56 | 107 | 1.61e-17 | 79.0 |
| Msa1334130 | MtrunA17_Chr4g0061831 | 71.698 | 53 | 13 | 1 | 441 | 493 | 66 | 116 | 1.26e-15 | 73.6 |
| Msa1334130 | MtrunA17_Chr4g0063991 | 58.824 | 68 | 24 | 2 | 312 | 376 | 1 | 67 | 1.93e-13 | 66.2 |
| Msa1334130 | MtrunA17_Chr4g0063981 | 71.429 | 35 | 10 | 0 | 174 | 208 | 1 | 35 | 6.82e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1334130 | AT1G73990.1 | 39.696 | 592 | 236 | 13 | 24 | 501 | 30 | 614 | 1.68e-110 | 350 |
| Msa1334130 | AT1G73990.2 | 43.320 | 494 | 217 | 11 | 24 | 461 | 30 | 516 | 1.58e-108 | 342 |
| Msa1334130 | AT2G23940.2 | 51.007 | 149 | 34 | 3 | 574 | 722 | 60 | 169 | 7.25e-39 | 142 |
| Msa1334130 | AT2G23940.1 | 51.007 | 149 | 34 | 3 | 574 | 722 | 60 | 169 | 7.25e-39 | 142 |
| Msa1334130 | AT2G23940.3 | 51.007 | 149 | 34 | 3 | 574 | 722 | 60 | 169 | 7.25e-39 | 142 |
| Msa1334130 | AT4G30500.1 | 48.993 | 149 | 37 | 3 | 574 | 722 | 60 | 169 | 2.13e-35 | 132 |
Find 193 sgRNAs with CRISPR-Local
Find 516 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCAACCAGTGTTCAAATTT+TGG | 0.096910 | 8_4:+54441914 | None:intergenic |
| TTTCGTATGCCCATCTATTT+AGG | 0.107075 | 8_4:-54435598 | Msa1334130:three_prime_UTR |
| CTCCATCAATCTTGGATAAT+TGG | 0.115218 | 8_4:+54435695 | None:intergenic |
| TTGGAAAAGGATCTATTATT+TGG | 0.128131 | 8_4:+54441088 | None:intergenic |
| CAATCCTTTGGCTTGATTAA+AGG | 0.155831 | 8_4:-54435958 | Msa1334130:CDS |
| CGAGACAACAACTGCATTAA+TGG | 0.184426 | 8_4:-54441674 | Msa1334130:CDS |
| TGAACACTGATTATAAAATT+TGG | 0.184917 | 8_4:+54438613 | None:intergenic |
| TTTGCTTATGTCCCTGAAAT+TGG | 0.196065 | 8_4:-54441832 | Msa1334130:CDS |
| TGGATAATATTTACTCAAAT+TGG | 0.197209 | 8_4:-54441654 | Msa1334130:CDS |
| AATTTGGAAGGTAAGATTTC+TGG | 0.242205 | 8_4:-54442225 | Msa1334130:CDS |
| TGGAACCTCTTCCATTGATT+TGG | 0.252339 | 8_4:+54441069 | None:intergenic |
| TTTGTTGAGGTTCATTTGTA+TGG | 0.259020 | 8_4:-54441757 | Msa1334130:CDS |
| AGGAGGAATTTAATCTTCTT+TGG | 0.260660 | 8_4:-54440871 | Msa1334130:CDS |
| CTCGGTTTGGTTGATGCTAT+TGG | 0.265550 | 8_4:-54441004 | Msa1334130:CDS |
| CATAACGGATTTACTGTATA+TGG | 0.271470 | 8_4:-54441521 | Msa1334130:CDS |
| CAGTTCAGGAGGTAAATTTC+GGG | 0.292898 | 8_4:-54441266 | Msa1334130:CDS |
| TGAAGCAATGACGGGTATTT+CGG | 0.318803 | 8_4:+54441204 | None:intergenic |
| TTCGTATGCCCATCTATTTA+GGG | 0.332204 | 8_4:-54435597 | Msa1334130:three_prime_UTR |
| GTGGGTTCTGAAGTGGAAAT+TGG | 0.336571 | 8_4:-54438566 | Msa1334130:intron |
| ACAGTTCAGGAGGTAAATTT+CGG | 0.345303 | 8_4:-54441267 | Msa1334130:CDS |
| GCAGAAAATCTTACCTTAGT+TGG | 0.347938 | 8_4:-54441121 | Msa1334130:CDS |
| ATCTTAAATTTCAGAAAATC+AGG | 0.347978 | 8_4:-54441865 | Msa1334130:CDS |
| AGGCTGTAGCCTATGGAATT+TGG | 0.348664 | 8_4:-54437362 | Msa1334130:CDS |
| GTCCTTGACAAACTTAGGTT+TGG | 0.351814 | 8_4:+54435766 | None:intergenic |
| CCAAAATTTGAACACTGGTT+GGG | 0.355126 | 8_4:-54441914 | Msa1334130:CDS |
| ATAGCCATCATTCGAGTCTC+AGG | 0.356408 | 8_4:-54441376 | Msa1334130:CDS |
| CACAGGGGAAGGGGAAGGTT+TGG | 0.359665 | 8_4:-54441048 | Msa1334130:CDS |
| TTATGAAACCCTCTTCTTTG+AGG | 0.367459 | 8_4:+54441539 | None:intergenic |
| TAGAAGCTGGGTGGTTGAAA+TGG | 0.372509 | 8_4:-54435538 | Msa1334130:three_prime_UTR |
| TTGTTGGTTTATTATTGAAC+AGG | 0.374326 | 8_4:-54438191 | Msa1334130:intron |
| TTTACACAATTTATAGAAGC+TGG | 0.374779 | 8_4:-54435551 | Msa1334130:three_prime_UTR |
| AGTTTATTGAGAATATATAT+AGG | 0.377641 | 8_4:-54441333 | Msa1334130:CDS |
| ATCTAAAAGTTCACCGTCTT+CGG | 0.382362 | 8_4:+54438032 | None:intergenic |
| AAGGCCAATATACCTCAAAA+TGG | 0.388556 | 8_4:-54440947 | Msa1334130:CDS |
| CCATCATCTCTGGAAAGTTC+TGG | 0.397340 | 8_4:-54437125 | Msa1334130:CDS |
| AACTTTCCTTTCAGCTTAAG+TGG | 0.398406 | 8_4:+54435479 | None:intergenic |
| CTCTGGCTTGAAGAAGTATC+TGG | 0.400164 | 8_4:-54442127 | Msa1334130:CDS |
| CTCTTCCATTGATTTGGAAA+AGG | 0.400283 | 8_4:+54441075 | None:intergenic |
| TCCATCAATCTTGGATAATT+GGG | 0.400313 | 8_4:+54435696 | None:intergenic |
| GATGCAATATATTCCCTTGT+GGG | 0.401712 | 8_4:-54438584 | Msa1334130:CDS |
| ATTGTCCGAATTGACAGTTC+AGG | 0.411636 | 8_4:-54441280 | Msa1334130:CDS |
| TTTGGAGCATACCAATCCTT+TGG | 0.411793 | 8_4:-54435970 | Msa1334130:CDS |
| CTCTTAGCAAGTTGTTGATA+AGG | 0.418423 | 8_4:+54438072 | None:intergenic |
| GTAAAACCCTCCATCAATCT+TGG | 0.421219 | 8_4:+54435687 | None:intergenic |
| ATATTGATTACCTGATTTGT+TGG | 0.424170 | 8_4:-54438207 | Msa1334130:CDS |
| AGAGGTGGAAGCAGTGTTGA+TGG | 0.428712 | 8_4:-54438644 | Msa1334130:CDS |
| CCTACTTGAAGGAAAGGCTT+GGG | 0.430422 | 8_4:-54441486 | Msa1334130:CDS |
| TGGATAATCAACATCCTTGC+CGG | 0.434812 | 8_4:+54442176 | None:intergenic |
| GTTTATTGAGAATATATATA+GGG | 0.435192 | 8_4:-54441332 | Msa1334130:CDS |
| TGCCACAAGGTTCAGAGGTA+TGG | 0.435209 | 8_4:-54435930 | Msa1334130:CDS |
| TCCAAAATTTGAACACTGGT+TGG | 0.435258 | 8_4:-54441915 | Msa1334130:CDS |
| TAGCCTATGGAATTTGGTCT+CGG | 0.436465 | 8_4:-54437356 | Msa1334130:CDS |
| GCTCGTGCGGTAGAATTTGA+GGG | 0.437753 | 8_4:+54442320 | None:intergenic |
| ATGACCCTGGTGAAGTTTGC+GGG | 0.437791 | 8_4:-54437997 | Msa1334130:CDS |
| CAATAATAAACCAACAAATC+AGG | 0.437914 | 8_4:+54438197 | None:intergenic |
| CTTATCAACAACTTGCTAAG+AGG | 0.440577 | 8_4:-54438071 | Msa1334130:CDS |
| AACTAGATAGTTTGCTGGAA+TGG | 0.441773 | 8_4:-54435740 | Msa1334130:exon |
| TCTTAGCAAGTTGTTGATAA+GGG | 0.441838 | 8_4:+54438073 | None:intergenic |
| TACCTCCTGAACTGTCAATT+CGG | 0.443292 | 8_4:+54441275 | None:intergenic |
| GTTCTTCAAATCAATTTGTC+CGG | 0.445006 | 8_4:-54442051 | Msa1334130:CDS |
| TCCTCCTCCCAGGGTAAAGT+TGG | 0.446367 | 8_4:+54440890 | None:intergenic |
| AACTTCTTACCAAGTGCTTA+CGG | 0.447367 | 8_4:+54437938 | None:intergenic |
| GAATTTGAGGGGTTTATGAA+TGG | 0.450237 | 8_4:+54442332 | None:intergenic |
| CTCCCAGGGTAAAGTTGGAC+AGG | 0.450486 | 8_4:+54440895 | None:intergenic |
| ACATGTCAGATACCAGCATT+TGG | 0.452980 | 8_4:-54435988 | Msa1334130:intron |
| TACAAATGAACCTCAACAAA+AGG | 0.456509 | 8_4:+54441760 | None:intergenic |
| CAAAATTTGAACACTGGTTG+GGG | 0.459205 | 8_4:-54441913 | Msa1334130:CDS |
| CAAGTCGCTTCCATCATCTC+TGG | 0.460619 | 8_4:-54437135 | Msa1334130:CDS |
| GGAAGAGGTTCCACAGGGGA+AGG | 0.463372 | 8_4:-54441059 | Msa1334130:CDS |
| GAGGGAAAAGATGGAGAAGA+AGG | 0.464994 | 8_4:-54435792 | Msa1334130:CDS |
| AAGAGGTTCCACAGGGGAAG+GGG | 0.467563 | 8_4:-54441057 | Msa1334130:CDS |
| ACATGAACTAGATAGTTTGC+TGG | 0.470194 | 8_4:-54435745 | Msa1334130:exon |
| TGAAAAGACCCCGCAAGAAG+AGG | 0.473639 | 8_4:-54435811 | Msa1334130:CDS |
| ATTAAATTCCTCCTCCTCCC+AGG | 0.476401 | 8_4:+54440880 | None:intergenic |
| AGGGGTTTATGAATGGTAGC+AGG | 0.476548 | 8_4:+54442339 | None:intergenic |
| AAGAGAAAATGTCGAAAACT+TGG | 0.476552 | 8_4:-54441599 | Msa1334130:CDS |
| CCAGAACTTTCCAGAGATGA+TGG | 0.477172 | 8_4:+54437125 | None:intergenic |
| AAGGATGTTGATTATCCAAC+CGG | 0.477750 | 8_4:-54442171 | Msa1334130:CDS |
| TTCATGTCCTTGACAAACTT+AGG | 0.479486 | 8_4:+54435761 | None:intergenic |
| TGATATTATCACCTACTTGA+AGG | 0.483027 | 8_4:-54441497 | Msa1334130:CDS |
| CAGAGCATCAACAGAATTCA+AGG | 0.483419 | 8_4:-54441308 | Msa1334130:CDS |
| AACTTTACCCTGGGAGGAGG+AGG | 0.483757 | 8_4:-54440888 | Msa1334130:CDS |
| GCAGGATACTACTTAGCAAC+GGG | 0.485513 | 8_4:-54441160 | Msa1334130:CDS |
| ATATTGTAGGCTGTAGCCTA+TGG | 0.486967 | 8_4:-54437369 | Msa1334130:intron |
| TACTACTTAGCAACGGGAGC+AGG | 0.490304 | 8_4:-54441154 | Msa1334130:CDS |
| GGACGCAACATCTCTCGGTT+TGG | 0.491111 | 8_4:-54441017 | Msa1334130:CDS |
| TTCGGGCATCTAATTATATG+TGG | 0.492637 | 8_4:-54441249 | Msa1334130:CDS |
| TCTGATGTGGCAACAAGTGC+AGG | 0.494828 | 8_4:-54441178 | Msa1334130:CDS |
| AACAAATTATCGCAAATTTG+AGG | 0.494896 | 8_4:+54441982 | None:intergenic |
| CAAAGAAGAGGGTTTCATAA+CGG | 0.495857 | 8_4:-54441536 | Msa1334130:CDS |
| AATCGACTGTTGGAATATCA+AGG | 0.496160 | 8_4:-54441414 | Msa1334130:CDS |
| TATTGCTATAGCAAAATTGA+AGG | 0.500409 | 8_4:-54440966 | Msa1334130:CDS |
| TACCTCTGAATCGGTGTGTA+GGG | 0.501142 | 8_4:+54442014 | None:intergenic |
| CGCGTTAGTAAATCGACTGT+TGG | 0.501184 | 8_4:-54441424 | Msa1334130:CDS |
| ATCAATGGAAGAGGTTCCAC+AGG | 0.501640 | 8_4:-54441065 | Msa1334130:CDS |
| ACCCAATTATCCAAGATTGA+TGG | 0.502312 | 8_4:-54435697 | Msa1334130:three_prime_UTR |
| CCGCAAGAAGAGGGAAAAGA+TGG | 0.502355 | 8_4:-54435801 | Msa1334130:CDS |
| TCATACCCGCAAACTTCACC+AGG | 0.504556 | 8_4:+54437992 | None:intergenic |
| TAGAGATAATACCTCTGAAT+CGG | 0.505324 | 8_4:+54442005 | None:intergenic |
| GAAAAGACCCCGCAAGAAGA+GGG | 0.506545 | 8_4:-54435810 | Msa1334130:CDS |
| AAATAGATGGGCATACGAAA+AGG | 0.507038 | 8_4:+54435601 | None:intergenic |
| ACCTACTTGAAGGAAAGGCT+TGG | 0.508749 | 8_4:-54441487 | Msa1334130:CDS |
| GATTGGTATGCTCCAAATGC+TGG | 0.509174 | 8_4:+54435976 | None:intergenic |
| TTCCCTTGTGGGTTCTGAAG+TGG | 0.509867 | 8_4:-54438573 | Msa1334130:CDS |
| TTTGATTTCATTCCACACTC+TGG | 0.514952 | 8_4:-54442144 | Msa1334130:CDS |
| TTACACAATTTATAGAAGCT+GGG | 0.517313 | 8_4:-54435550 | Msa1334130:three_prime_UTR |
| GAAGAGGTTCCACAGGGGAA+GGG | 0.517831 | 8_4:-54441058 | Msa1334130:CDS |
| AGCTGAAAGGAAAGTTCTAT+CGG | 0.519069 | 8_4:-54435472 | None:intergenic |
| TGATGCAATATATTCCCTTG+TGG | 0.521050 | 8_4:-54438585 | Msa1334130:CDS |
| CAGAGGTATGGTCAACGTCT+TGG | 0.522398 | 8_4:-54435918 | Msa1334130:intron |
| TGGAATGAAATCAAAATCTC+CGG | 0.524479 | 8_4:+54442152 | None:intergenic |
| TATGACCCTGGTGAAGTTTG+CGG | 0.525962 | 8_4:-54437998 | Msa1334130:CDS |
| TTATCACCTACTTGAAGGAA+AGG | 0.529131 | 8_4:-54441492 | Msa1334130:CDS |
| AACATCCTTGCCGGAAGAAG+AGG | 0.530642 | 8_4:+54442185 | None:intergenic |
| GGTTCCACAGGGGAAGGGGA+AGG | 0.533194 | 8_4:-54441053 | Msa1334130:CDS |
| ATCAGATATTGAAGCAATGA+CGG | 0.536024 | 8_4:+54441195 | None:intergenic |
| TAAAGATCTCCGTAAGCACT+TGG | 0.536968 | 8_4:-54437947 | Msa1334130:intron |
| GGTTTGGTTGATGCTATTGG+TGG | 0.540573 | 8_4:-54441001 | Msa1334130:CDS |
| TCACCGTCTTCGGTATAGCT+AGG | 0.541241 | 8_4:+54438042 | None:intergenic |
| TATTCTTTGAAAGAAACAAA+AGG | 0.543012 | 8_4:+54441451 | None:intergenic |
| AAACTAAATTTGTCAACAGT+GGG | 0.543801 | 8_4:+54441733 | None:intergenic |
| AGCCTATGGAATTTGGTCTC+GGG | 0.544163 | 8_4:-54437355 | Msa1334130:CDS |
| TGGACTAAAAGAACCAACTA+AGG | 0.544447 | 8_4:+54441108 | None:intergenic |
| TTATCAACAACTTGCTAAGA+GGG | 0.546463 | 8_4:-54438070 | Msa1334130:CDS |
| AATATCCAAAATTTGAACAC+TGG | 0.547788 | 8_4:-54441919 | Msa1334130:CDS |
| CTTTAATCAAGCCAAAGGAT+TGG | 0.550609 | 8_4:+54435959 | None:intergenic |
| ATACCTCTGAATCGGTGTGT+AGG | 0.552557 | 8_4:+54442013 | None:intergenic |
| GTTTGGTTGATGCTATTGGT+GGG | 0.556402 | 8_4:-54441000 | Msa1334130:CDS |
| TTGGTTAACTTCGTAACTGA+AGG | 0.556482 | 8_4:-54441580 | Msa1334130:CDS |
| GGTATGACTGTCTTGTCTTG+TGG | 0.556549 | 8_4:-54437976 | Msa1334130:CDS |
| GGTAAGGACGCAACATCTCT+CGG | 0.557645 | 8_4:-54441022 | Msa1334130:CDS |
| TTGAAATGGAGAAGAGCCTC+AGG | 0.558437 | 8_4:-54435524 | Msa1334130:three_prime_UTR |
| CACCCTACACACCGATTCAG+AGG | 0.558538 | 8_4:-54442016 | Msa1334130:CDS |
| TACCCTGTCCAACTTTACCC+TGG | 0.561366 | 8_4:-54440898 | Msa1334130:CDS |
| TGAATCGGTGTGTAGGGTGT+CGG | 0.562552 | 8_4:+54442020 | None:intergenic |
| TCCAACTTTACCCTGGGAGG+AGG | 0.565785 | 8_4:-54440891 | Msa1334130:CDS |
| GATGTAGTATCTTCTTCCAC+CGG | 0.568021 | 8_4:-54441628 | Msa1334130:CDS |
| AGTAGAAGACCTCAAAGAAG+AGG | 0.568425 | 8_4:-54441548 | Msa1334130:CDS |
| GTCACAGCGTTCATCTCTCA+TGG | 0.568866 | 8_4:-54442379 | Msa1334130:CDS |
| AGACCCTGAGACTCGAATGA+TGG | 0.571972 | 8_4:+54441372 | None:intergenic |
| AATGAACCTCAACAAAAGGA+TGG | 0.572223 | 8_4:+54441764 | None:intergenic |
| AAATCCTTTAATCAAGCCAA+AGG | 0.579388 | 8_4:+54435954 | None:intergenic |
| CTCGTGCGGTAGAATTTGAG+GGG | 0.580670 | 8_4:+54442321 | None:intergenic |
| TCAGATATTGAAGCAATGAC+GGG | 0.581772 | 8_4:+54441196 | None:intergenic |
| CTGCTAGCACTCCCCTCAGA+GGG | 0.583729 | 8_4:-54442090 | Msa1334130:CDS |
| CAATTATCCAAGATTGATGG+AGG | 0.583920 | 8_4:-54435694 | Msa1334130:three_prime_UTR |
| ACCCTGTCCAACTTTACCCT+GGG | 0.586996 | 8_4:-54440897 | Msa1334130:CDS |
| AGCAGGTGATATACAGCGAT+CGG | 0.592109 | 8_4:+54442356 | None:intergenic |
| AAAGTACCACTTAAGCTGAA+AGG | 0.593672 | 8_4:-54435485 | Msa1334130:three_prime_UTR |
| TAGGGTGTCGGATATTATGC+CGG | 0.594782 | 8_4:+54442032 | None:intergenic |
| ATGAAATCAAAATCTCCGGT+TGG | 0.594805 | 8_4:+54442156 | None:intergenic |
| TACTTCTTCAAGCCAGAGTG+TGG | 0.594882 | 8_4:+54442132 | None:intergenic |
| GTAGAAGACCTCAAAGAAGA+GGG | 0.597121 | 8_4:-54441547 | Msa1334130:CDS |
| TTAATGCAGTTGTTGTCTCG+TGG | 0.598388 | 8_4:+54441677 | None:intergenic |
| ATCGACTGTTGGAATATCAA+GGG | 0.598413 | 8_4:-54441413 | Msa1334130:CDS |
| AAAACTAAATTTGTCAACAG+TGG | 0.601150 | 8_4:+54441732 | None:intergenic |
| CATTGCTTCAATATCTGATG+TGG | 0.601190 | 8_4:-54441191 | Msa1334130:CDS |
| TTAAATTCCTCCTCCTCCCA+GGG | 0.602774 | 8_4:+54440881 | None:intergenic |
| ATGAACCTCAACAAAAGGAT+GGG | 0.602807 | 8_4:+54441765 | None:intergenic |
| GGGGAAGGTTTGGACTGGTA+AGG | 0.604771 | 8_4:-54441038 | Msa1334130:CDS |
| TAGCCATCATTCGAGTCTCA+GGG | 0.606571 | 8_4:-54441375 | Msa1334130:CDS |
| CGATCAATAATAGAAGATGA+TGG | 0.608918 | 8_4:+54442282 | None:intergenic |
| TGCAGGATACTACTTAGCAA+CGG | 0.610387 | 8_4:-54441161 | Msa1334130:CDS |
| CGGAAGAAGAGGAAAATAAG+TGG | 0.613550 | 8_4:+54442196 | None:intergenic |
| CCCAAGCCTTTCCTTCAAGT+AGG | 0.616569 | 8_4:+54441486 | None:intergenic |
| AAGCCTAGCTATACCGAAGA+CGG | 0.617809 | 8_4:-54438045 | Msa1334130:CDS |
| GTTCTGGTACATATATCTTG+TGG | 0.618251 | 8_4:-54437109 | Msa1334130:intron |
| ATAATAGAAGATGATGGTGG+CGG | 0.619265 | 8_4:+54442288 | None:intergenic |
| GTAAACTAGATGAAATTCGA+AGG | 0.619983 | 8_4:-54441891 | Msa1334130:CDS |
| GTCCGAATTGACAGTTCAGG+AGG | 0.622572 | 8_4:-54441277 | Msa1334130:CDS |
| ATCCAAACCTAAGTTTGTCA+AGG | 0.624101 | 8_4:-54435768 | Msa1334130:CDS |
| CTACTTGAAGGAAAGGCTTG+GGG | 0.625623 | 8_4:-54441485 | Msa1334130:CDS |
| AATTATCCAAGATTGATGGA+GGG | 0.626335 | 8_4:-54435693 | Msa1334130:three_prime_UTR |
| TTTCCACTTCAGAACCCACA+AGG | 0.626686 | 8_4:+54438570 | None:intergenic |
| GGGAAGGGGAAGGTTTGGAC+TGG | 0.637451 | 8_4:-54441043 | Msa1334130:CDS |
| CACAATTTATAGAAGCTGGG+TGG | 0.646877 | 8_4:-54435547 | Msa1334130:three_prime_UTR |
| CAAACCTTCCCCTTCCCCTG+TGG | 0.650489 | 8_4:+54441049 | None:intergenic |
| ATCCCGAGACCAAATTCCAT+AGG | 0.650556 | 8_4:+54437353 | None:intergenic |
| GACCATACCTCTGAACCTTG+TGG | 0.656239 | 8_4:+54435928 | None:intergenic |
| TCCCAGGGTAAAGTTGGACA+GGG | 0.658955 | 8_4:+54440896 | None:intergenic |
| ATAAATACGAGGATCATACA+TGG | 0.660349 | 8_4:+54441954 | None:intergenic |
| CAATATACCTCAAAATGGTG+AGG | 0.660377 | 8_4:-54440942 | Msa1334130:CDS |
| TGAACATGAGAAACTAACTC+AGG | 0.660538 | 8_4:+54435631 | None:intergenic |
| CTGTCCAACTTTACCCTGGG+AGG | 0.667967 | 8_4:-54440894 | Msa1334130:CDS |
| TCAATGGAAGAGGTTCCACA+GGG | 0.668896 | 8_4:-54441064 | Msa1334130:CDS |
| CTTATCGCACAAAACACCTG+AGG | 0.671204 | 8_4:+54435508 | None:intergenic |
| TCTGCTAGCACTCCCCTCAG+AGG | 0.672433 | 8_4:-54442091 | Msa1334130:CDS |
| TTCCACTTCAGAACCCACAA+GGG | 0.682282 | 8_4:+54438571 | None:intergenic |
| GCGGTGATATTGCGCTCGTG+CGG | 0.694021 | 8_4:+54442307 | None:intergenic |
| TCAATAATAGAAGATGATGG+TGG | 0.696702 | 8_4:+54442285 | None:intergenic |
| AGATATACAGCATAAATACG+AGG | 0.747490 | 8_4:+54441943 | None:intergenic |
| CATACCCGCAAACTTCACCA+GGG | 0.781463 | 8_4:+54437993 | None:intergenic |
| CAATGGAAGAGGTTCCACAG+GGG | 0.794420 | 8_4:-54441063 | Msa1334130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAGTTAAAATTTTATCT+TGG | - | chr8_4:54439940-54439959 | Msa1334130:intron | 10.0% |
| !!! | TAAAGTTAAAATTTTATCTT+GGG | - | chr8_4:54439941-54439960 | Msa1334130:intron | 10.0% |
| !!! | CTCTTTTAATTATTAATAAA+GGG | + | chr8_4:54441809-54441828 | None:intergenic | 10.0% |
| !!! | TCTCTTTTAATTATTAATAA+AGG | + | chr8_4:54441810-54441829 | None:intergenic | 10.0% |
| !!! | AAATTGAATTTTTTGTGAAT+CGG | + | chr8_4:54435616-54435635 | None:intergenic | 15.0% |
| !!! | TGACAAATTTAGTTTTATTA+AGG | - | chr8_4:54436131-54436150 | Msa1334130:intron | 15.0% |
| !!! | GACAAATTTAGTTTTATTAA+GGG | - | chr8_4:54436132-54436151 | Msa1334130:intron | 15.0% |
| !! | AGTTTATTGAGAATATATAT+AGG | - | chr8_4:54436523-54436542 | Msa1334130:intron | 15.0% |
| !! | GTTTATTGAGAATATATATA+GGG | - | chr8_4:54436524-54436543 | Msa1334130:intron | 15.0% |
| !! | TTGATGTTATTGTAATTTAA+TGG | - | chr8_4:54437155-54437174 | Msa1334130:CDS | 15.0% |
| !! | ATAAATAAAACCTTGAAATT+TGG | - | chr8_4:54437408-54437427 | Msa1334130:intron | 15.0% |
| !! | TAAATAAAACCTTGAAATTT+GGG | - | chr8_4:54437409-54437428 | Msa1334130:intron | 15.0% |
| !!! | TAAGACAATATTTCTATTTT+TGG | - | chr8_4:54438314-54438333 | Msa1334130:intron | 15.0% |
| !!! | AAGACAATATTTCTATTTTT+GGG | - | chr8_4:54438315-54438334 | Msa1334130:intron | 15.0% |
| !!! | ATATGTGTAACTTATATTTT+TGG | - | chr8_4:54438932-54438951 | Msa1334130:intron | 15.0% |
| !!! | ATTATTTTTATGAAATGTGA+TGG | + | chr8_4:54439046-54439065 | None:intergenic | 15.0% |
| !!! | TCCATAAACTTATTTTAATA+GGG | - | chr8_4:54440145-54440164 | Msa1334130:intron | 15.0% |
| !! | GTTTATTTATGAATTATATC+AGG | - | chr8_4:54441650-54441669 | Msa1334130:CDS | 15.0% |
| !!! | AACCAAAAAGTATATATTTT+TGG | + | chr8_4:54441739-54441758 | None:intergenic | 15.0% |
| !! | TTAAAGTTGTAATCAATATT+GGG | - | chr8_4:54441763-54441782 | Msa1334130:CDS | 15.0% |
| !! | GATTCACAAAAAATTCAATT+TGG | - | chr8_4:54435615-54435634 | Msa1334130:three_prime_UTR | 20.0% |
| !! | ATCTTAAATTTCAGAAAATC+AGG | - | chr8_4:54435991-54436010 | Msa1334130:intron | 20.0% |
| !! | TGGATAATATTTACTCAAAT+TGG | - | chr8_4:54436202-54436221 | Msa1334130:intron | 20.0% |
| !!! | TATTCTTTGAAAGAAACAAA+AGG | + | chr8_4:54436408-54436427 | None:intergenic | 20.0% |
| !!! | TTCTTTTTCTTTCTTTGAAT+CGG | + | chr8_4:54437533-54437552 | None:intergenic | 20.0% |
| !!! | ATTCCACTTTTTATTATTTC+TGG | - | chr8_4:54437701-54437720 | Msa1334130:intron | 20.0% |
| !! | ATTACTTCTGTTTAAAGAAA+GGG | - | chr8_4:54438174-54438193 | Msa1334130:intron | 20.0% |
| !! | TATGTTTATGAAATCATAAG+TGG | - | chr8_4:54439153-54439172 | Msa1334130:intron | 20.0% |
| !!! | TGAACACTGATTATAAAATT+TGG | + | chr8_4:54439246-54439265 | None:intergenic | 20.0% |
| !! | AGGTTATTTATGTAGTAATT+AGG | - | chr8_4:54439685-54439704 | Msa1334130:intron | 20.0% |
| !!! | CTCCATAAACTTATTTTAAT+AGG | - | chr8_4:54440144-54440163 | Msa1334130:intron | 20.0% |
| !! | TCCCTATTAAAATAAGTTTA+TGG | + | chr8_4:54440149-54440168 | None:intergenic | 20.0% |
| !!! | CTCCAAAAATATATACTTTT+TGG | - | chr8_4:54441734-54441753 | Msa1334130:CDS | 20.0% |
| !! | GTTAAAGTTGTAATCAATAT+TGG | - | chr8_4:54441762-54441781 | Msa1334130:CDS | 20.0% |
| !! | ATATTGGGACATATATAAAA+TGG | - | chr8_4:54441778-54441797 | Msa1334130:CDS | 20.0% |
| ! | CACAAAAAATTCAATTTGGA+AGG | - | chr8_4:54435619-54435638 | Msa1334130:three_prime_UTR | 25.0% |
| ! | AACAAATTATCGCAAATTTG+AGG | + | chr8_4:54435877-54435896 | None:intergenic | 25.0% |
| ! | AATATCCAAAATTTGAACAC+TGG | - | chr8_4:54435937-54435956 | Msa1334130:CDS | 25.0% |
| ! | AAACTAAATTTGTCAACAGT+GGG | + | chr8_4:54436126-54436145 | None:intergenic | 25.0% |
| ! | AAAACTAAATTTGTCAACAG+TGG | + | chr8_4:54436127-54436146 | None:intergenic | 25.0% |
| ! | TTGGAAAAGGATCTATTATT+TGG | + | chr8_4:54436771-54436790 | None:intergenic | 25.0% |
| ! | TATTGCTATAGCAAAATTGA+AGG | - | chr8_4:54436890-54436909 | Msa1334130:intron | 25.0% |
| ! | TTCTTGTTGGTATAATAACT+AGG | - | chr8_4:54437086-54437105 | Msa1334130:intron | 25.0% |
| !!! | AGCACTTATCATTTTTCTTT+TGG | - | chr8_4:54437319-54437338 | Msa1334130:intron | 25.0% |
| ! | ATTAGATAAGTAGACAGTTA+AGG | + | chr8_4:54437351-54437370 | None:intergenic | 25.0% |
| ! | GGAATTATAGAGATGAAAAA+TGG | + | chr8_4:54437686-54437705 | None:intergenic | 25.0% |
| ! | AAAATGAAGGTTCGTATATT+TGG | - | chr8_4:54437975-54437994 | Msa1334130:CDS | 25.0% |
| !!! | TCTACTTTATTTTGATCAAG+TGG | - | chr8_4:54438006-54438025 | Msa1334130:CDS | 25.0% |
| !! | AGAATTGTTGATGTTGATTA+AGG | - | chr8_4:54438076-54438095 | Msa1334130:CDS | 25.0% |
| ! | TTGATTAAGGCAGTATTAAT+TGG | - | chr8_4:54438089-54438108 | Msa1334130:intron | 25.0% |
| ! | TGATTAAGGCAGTATTAATT+GGG | - | chr8_4:54438090-54438109 | Msa1334130:intron | 25.0% |
| ! | TTAAGGCATATCTTGTTAAT+AGG | - | chr8_4:54438126-54438145 | Msa1334130:intron | 25.0% |
| ! | CATTACTTCTGTTTAAAGAA+AGG | - | chr8_4:54438173-54438192 | Msa1334130:intron | 25.0% |
| !! | CAAATGTAGAAACTTTTTGT+TGG | - | chr8_4:54438236-54438255 | Msa1334130:CDS | 25.0% |
| !! | AGAAACTTTTTGTTGGAATT+TGG | - | chr8_4:54438243-54438262 | Msa1334130:CDS | 25.0% |
| !! | GAAACTTTTTGTTGGAATTT+GGG | - | chr8_4:54438244-54438263 | Msa1334130:intron | 25.0% |
| !! | GCTCTTCATATTTTTCTAAA+GGG | + | chr8_4:54438379-54438398 | None:intergenic | 25.0% |
| !! | TTTTAAATTGTGCCTTAGAT+TGG | - | chr8_4:54438516-54438535 | Msa1334130:intron | 25.0% |
| ! | GTTAATCAATTACCAATCTA+AGG | + | chr8_4:54438531-54438550 | None:intergenic | 25.0% |
| ! | AGGACACGAATATAAAAAAA+GGG | + | chr8_4:54438903-54438922 | None:intergenic | 25.0% |
| !!! | GTAACTTATATTTTTGGTGT+TGG | - | chr8_4:54438938-54438957 | Msa1334130:intron | 25.0% |
| !! | TCACTATATCATTTTCAAAG+AGG | - | chr8_4:54439194-54439213 | Msa1334130:intron | 25.0% |
| !! | ATATTGATTACCTGATTTGT+TGG | - | chr8_4:54439649-54439668 | Msa1334130:intron | 25.0% |
| ! | CAATAATAAACCAACAAATC+AGG | + | chr8_4:54439662-54439681 | None:intergenic | 25.0% |
| !!! | TTGTTGGTTTATTATTGAAC+AGG | - | chr8_4:54439665-54439684 | Msa1334130:intron | 25.0% |
| !!! | ACTTTTTCATTAAGCTTACA+GGG | - | chr8_4:54440107-54440126 | Msa1334130:intron | 25.0% |
| !!! | TCATTTTAGTTTCCGTAAAA+TGG | + | chr8_4:54440371-54440390 | None:intergenic | 25.0% |
| !! | AAGTGTTGTGTATATATTGT+AGG | - | chr8_4:54440474-54440493 | Msa1334130:intron | 25.0% |
| ! | CTTCGATTATCTATATAGTT+TGG | + | chr8_4:54440589-54440608 | None:intergenic | 25.0% |
| ! | TTATTAAGTAACCTTATGCT+TGG | - | chr8_4:54440900-54440919 | Msa1334130:CDS | 25.0% |
| ! | ATAAAGATCTATCATCTACA+AGG | - | chr8_4:54441022-54441041 | Msa1334130:CDS | 25.0% |
| ! | ACTAATTATTTGCCATAAAG+AGG | - | chr8_4:54441087-54441106 | Msa1334130:CDS | 25.0% |
| ! | AGGGAAGTAAAAAATTGTAT+TGG | - | chr8_4:54441225-54441244 | Msa1334130:CDS | 25.0% |
| !! | TATTGGAGAATGATTTTTGA+GGG | - | chr8_4:54441242-54441261 | Msa1334130:CDS | 25.0% |
| ! | AGTAAATCTAATGAACCTTT+AGG | + | chr8_4:54441466-54441485 | None:intergenic | 25.0% |
| !!! | TCTTGGTAATTTTCACTTTT+AGG | - | chr8_4:54441955-54441974 | Msa1334130:CDS | 25.0% |
| !! | TTTTCTTTCCCTAAATAGAT+GGG | + | chr8_4:54442270-54442289 | None:intergenic | 25.0% |
| ! | TTTACACAATTTATAGAAGC+TGG | - | chr8_4:54442305-54442324 | Msa1334130:CDS | 25.0% |
| ! | TTACACAATTTATAGAAGCT+GGG | - | chr8_4:54442306-54442325 | Msa1334130:CDS | 25.0% |
| ! | TCAATAATAGAAGATGATGG+TGG | + | chr8_4:54435574-54435593 | None:intergenic | 30.0% |
| CGATCAATAATAGAAGATGA+TGG | + | chr8_4:54435577-54435596 | None:intergenic | 30.0% | |
| AATTTGGAAGGTAAGATTTC+TGG | - | chr8_4:54435631-54435650 | Msa1334130:three_prime_UTR | 30.0% | |
| TGGAATGAAATCAAAATCTC+CGG | + | chr8_4:54435707-54435726 | None:intergenic | 30.0% | |
| GTTCTTCAAATCAATTTGTC+CGG | - | chr8_4:54435805-54435824 | Msa1334130:CDS | 30.0% | |
| TAGAGATAATACCTCTGAAT+CGG | + | chr8_4:54435854-54435873 | None:intergenic | 30.0% | |
| ATAAATACGAGGATCATACA+TGG | + | chr8_4:54435905-54435924 | None:intergenic | 30.0% | |
| AGATATACAGCATAAATACG+AGG | + | chr8_4:54435916-54435935 | None:intergenic | 30.0% | |
| GTAAACTAGATGAAATTCGA+AGG | - | chr8_4:54435965-54435984 | Msa1334130:CDS | 30.0% | |
| ! | ACTCTTTTACTCCAATTTCA+GGG | + | chr8_4:54436038-54436057 | None:intergenic | 30.0% |
| ! | TACTCTTTTACTCCAATTTC+AGG | + | chr8_4:54436039-54436058 | None:intergenic | 30.0% |
| TACAAATGAACCTCAACAAA+AGG | + | chr8_4:54436099-54436118 | None:intergenic | 30.0% | |
| TTTGTTGAGGTTCATTTGTA+TGG | - | chr8_4:54436099-54436118 | Msa1334130:intron | 30.0% | |
| ! | GACATTTTCTCTTTTCTTTC+CGG | + | chr8_4:54436250-54436269 | None:intergenic | 30.0% |
| AAGAGAAAATGTCGAAAACT+TGG | - | chr8_4:54436257-54436276 | Msa1334130:intron | 30.0% | |
| !! | CATAACGGATTTACTGTATA+TGG | - | chr8_4:54436335-54436354 | Msa1334130:intron | 30.0% |
| TGATATTATCACCTACTTGA+AGG | - | chr8_4:54436359-54436378 | Msa1334130:intron | 30.0% | |
| ATCAGATATTGAAGCAATGA+CGG | + | chr8_4:54436664-54436683 | None:intergenic | 30.0% | |
| ! | TAGATCCTTTTCCAAATCAA+TGG | - | chr8_4:54436776-54436795 | Msa1334130:intron | 30.0% |
| AGGAGGAATTTAATCTTCTT+TGG | - | chr8_4:54436985-54437004 | Msa1334130:intron | 30.0% | |
| GTTACTGCATTATTCGTAAA+GGG | - | chr8_4:54437049-54437068 | Msa1334130:intron | 30.0% | |
| TTGTTGGTATAATAACTAGG+AGG | - | chr8_4:54437089-54437108 | Msa1334130:intron | 30.0% | |
| !! | AGGAAAAAAGCGTTAAAATG+TGG | - | chr8_4:54437461-54437480 | Msa1334130:intron | 30.0% |
| !! | GTGATGCTTTTTAATGAGAA+AGG | + | chr8_4:54437505-54437524 | None:intergenic | 30.0% |
| AAACATCACAGCATACAATT+TGG | - | chr8_4:54437586-54437605 | Msa1334130:intron | 30.0% | |
| ! | TTTTGATAAATACTGCCCAA+CGG | + | chr8_4:54437614-54437633 | None:intergenic | 30.0% |
| TTGGGCAGTATTTATCAAAA+CGG | - | chr8_4:54437614-54437633 | Msa1334130:intron | 30.0% | |
| GAGATGAAAAATGGAATAAG+AGG | + | chr8_4:54437677-54437696 | None:intergenic | 30.0% | |
| !! | CTTCATTTTGAAGATAAGCA+GGG | + | chr8_4:54437964-54437983 | None:intergenic | 30.0% |
| GATTAAGGCAGTATTAATTG+GGG | - | chr8_4:54438091-54438110 | Msa1334130:intron | 30.0% | |
| ! | TGGGGAAAAGTTGAATTTTA+AGG | - | chr8_4:54438109-54438128 | Msa1334130:intron | 30.0% |
| ! | AATGCTAATTTGTGCTCTTA+AGG | - | chr8_4:54438198-54438217 | Msa1334130:CDS | 30.0% |
| ! | CGCTCTTCATATTTTTCTAA+AGG | + | chr8_4:54438380-54438399 | None:intergenic | 30.0% |
| AAACAGCTTGTGTAAAAACA+GGG | - | chr8_4:54438798-54438817 | Msa1334130:intron | 30.0% | |
| AATATAAAAAAAGGGCAACC+CGG | + | chr8_4:54438895-54438914 | None:intergenic | 30.0% | |
| CAGGACACGAATATAAAAAA+AGG | + | chr8_4:54438904-54438923 | None:intergenic | 30.0% | |
| !!! | TGTTGGTTTTTACTTAGATG+TGG | - | chr8_4:54438955-54438974 | Msa1334130:intron | 30.0% |
| ! | TATGTAGTCTGTAGCTATTT+TGG | - | chr8_4:54438993-54439012 | Msa1334130:intron | 30.0% |
| ! | CATAAGTGGTCTTTTCTAAT+CGG | - | chr8_4:54439167-54439186 | Msa1334130:intron | 30.0% |
| ! | CTATATCATTTTCAAAGAGG+TGG | - | chr8_4:54439197-54439216 | Msa1334130:intron | 30.0% |
| ! | ATTTTATCATCATCGGTAAG+TGG | - | chr8_4:54439340-54439359 | Msa1334130:intron | 30.0% |
| ! | TCTTAGCAAGTTGTTGATAA+GGG | + | chr8_4:54439786-54439805 | None:intergenic | 30.0% |
| !! | TTATCAACAACTTGCTAAGA+GGG | - | chr8_4:54439786-54439805 | Msa1334130:intron | 30.0% |
| TGTAAGCTTATAGGTCTAAA+GGG | + | chr8_4:54440084-54440103 | None:intergenic | 30.0% | |
| TTGTAAGCTTATAGGTCTAA+AGG | + | chr8_4:54440085-54440104 | None:intergenic | 30.0% | |
| TTTAGACCTATAAGCTTACA+AGG | - | chr8_4:54440084-54440103 | Msa1334130:intron | 30.0% | |
| AAAAGTCCTTGTAAGCTTAT+AGG | + | chr8_4:54440093-54440112 | None:intergenic | 30.0% | |
| !!! | GACTTTTTCATTAAGCTTAC+AGG | - | chr8_4:54440106-54440125 | Msa1334130:intron | 30.0% |
| ! | CTAATCCAAATTGTGTCTTT+TGG | - | chr8_4:54440188-54440207 | Msa1334130:intron | 30.0% |
| TGATACCAAAAGACACAATT+TGG | + | chr8_4:54440196-54440215 | None:intergenic | 30.0% | |
| TTATAGTTTATCTGTGCCAA+TGG | - | chr8_4:54440236-54440255 | Msa1334130:intron | 30.0% | |
| AGACTAAGTCAAAAAACCAT+TGG | + | chr8_4:54440255-54440274 | None:intergenic | 30.0% | |
| !! | GGGTATTTTTGTGAATAACA+TGG | - | chr8_4:54440293-54440312 | Msa1334130:intron | 30.0% |
| TTTGTGAATAACATGGTACT+CGG | - | chr8_4:54440300-54440319 | Msa1334130:intron | 30.0% | |
| ! | TCTGACTATGAACAAGTTTT+AGG | + | chr8_4:54440532-54440551 | None:intergenic | 30.0% |
| GATAATTCTTCACTTACTGT+TGG | - | chr8_4:54440648-54440667 | Msa1334130:intron | 30.0% | |
| !!! | GTGGTTTACTTTTAGAATGT+AGG | - | chr8_4:54440816-54440835 | Msa1334130:intron | 30.0% |
| !!! | GTGGTTTACTTTTAGAATGT+AGG | - | chr8_4:54440816-54440835 | Msa1334130:intron | 30.0% |
| !!! | TTTTTTACTTCCCTCAAATG+AGG | + | chr8_4:54441219-54441238 | None:intergenic | 30.0% |
| ! | GTATTGGAGAATGATTTTTG+AGG | - | chr8_4:54441241-54441260 | Msa1334130:CDS | 30.0% |
| !! | AGAATGATTTTTGAGGGTTT+TGG | - | chr8_4:54441248-54441267 | Msa1334130:CDS | 30.0% |
| !! | GAATGATTTTTGAGGGTTTT+GGG | - | chr8_4:54441249-54441268 | Msa1334130:CDS | 30.0% |
| !! | AATGATTTTTGAGGGTTTTG+GGG | - | chr8_4:54441250-54441269 | Msa1334130:CDS | 30.0% |
| TTTACTTATTAGTGCATGTC+TGG | - | chr8_4:54441480-54441499 | Msa1334130:CDS | 30.0% | |
| AAATCCTTTAATCAAGCCAA+AGG | + | chr8_4:54441905-54441924 | None:intergenic | 30.0% | |
| ! | ATTAAAGGATTTTTGCCACA+AGG | - | chr8_4:54441913-54441932 | Msa1334130:CDS | 30.0% |
| TATTACTATGAACCTTTCTG+TGG | + | chr8_4:54441981-54442000 | None:intergenic | 30.0% | |
| ! | TGTGTATGCATTTTGTGATT+AGG | - | chr8_4:54442009-54442028 | Msa1334130:CDS | 30.0% |
| ! | TGCATTTTGTGATTAGGAAT+CGG | - | chr8_4:54442015-54442034 | Msa1334130:CDS | 30.0% |
| TCCATCAATCTTGGATAATT+GGG | + | chr8_4:54442163-54442182 | None:intergenic | 30.0% | |
| AATTATCCAAGATTGATGGA+GGG | - | chr8_4:54442163-54442182 | Msa1334130:CDS | 30.0% | |
| ! | GTTTTCTTTCCCTAAATAGA+TGG | + | chr8_4:54442271-54442290 | None:intergenic | 30.0% |
| GAATTTGAGGGGTTTATGAA+TGG | + | chr8_4:54435527-54435546 | None:intergenic | 35.0% | |
| !! | ATAATAGAAGATGATGGTGG+CGG | + | chr8_4:54435571-54435590 | None:intergenic | 35.0% |
| !! | CACTTATTTTCCTCTTCTTC+CGG | - | chr8_4:54435661-54435680 | Msa1334130:three_prime_UTR | 35.0% |
| ! | AAGGATGTTGATTATCCAAC+CGG | - | chr8_4:54435685-54435704 | Msa1334130:three_prime_UTR | 35.0% |
| ATGAAATCAAAATCTCCGGT+TGG | + | chr8_4:54435703-54435722 | None:intergenic | 35.0% | |
| ! | TTTGATTTCATTCCACACTC+TGG | - | chr8_4:54435712-54435731 | Msa1334130:three_prime_UTR | 35.0% |
| TCCAAAATTTGAACACTGGT+TGG | - | chr8_4:54435941-54435960 | Msa1334130:CDS | 35.0% | |
| ! | CCAAAATTTGAACACTGGTT+GGG | - | chr8_4:54435942-54435961 | Msa1334130:CDS | 35.0% |
| ! | CAAAATTTGAACACTGGTTG+GGG | - | chr8_4:54435943-54435962 | Msa1334130:CDS | 35.0% |
| TTTGCTTATGTCCCTGAAAT+TGG | - | chr8_4:54436024-54436043 | Msa1334130:intron | 35.0% | |
| ATGAACCTCAACAAAAGGAT+GGG | + | chr8_4:54436094-54436113 | None:intergenic | 35.0% | |
| AATGAACCTCAACAAAAGGA+TGG | + | chr8_4:54436095-54436114 | None:intergenic | 35.0% | |
| ! | ATTTTCTCTTTTCTTTCCGG+TGG | + | chr8_4:54436247-54436266 | None:intergenic | 35.0% |
| TTGGTTAACTTCGTAACTGA+AGG | - | chr8_4:54436276-54436295 | Msa1334130:intron | 35.0% | |
| TTATGAAACCCTCTTCTTTG+AGG | + | chr8_4:54436320-54436339 | None:intergenic | 35.0% | |
| CAAAGAAGAGGGTTTCATAA+CGG | - | chr8_4:54436320-54436339 | Msa1334130:intron | 35.0% | |
| TTATCACCTACTTGAAGGAA+AGG | - | chr8_4:54436364-54436383 | Msa1334130:intron | 35.0% | |
| AATCGACTGTTGGAATATCA+AGG | - | chr8_4:54436442-54436461 | Msa1334130:intron | 35.0% | |
| ATCGACTGTTGGAATATCAA+GGG | - | chr8_4:54436443-54436462 | Msa1334130:intron | 35.0% | |
| ACAGTTCAGGAGGTAAATTT+CGG | - | chr8_4:54436589-54436608 | Msa1334130:intron | 35.0% | |
| TTCGGGCATCTAATTATATG+TGG | - | chr8_4:54436607-54436626 | Msa1334130:intron | 35.0% | |
| TCAGATATTGAAGCAATGAC+GGG | + | chr8_4:54436663-54436682 | None:intergenic | 35.0% | |
| CATTGCTTCAATATCTGATG+TGG | - | chr8_4:54436665-54436684 | Msa1334130:intron | 35.0% | |
| GCAGAAAATCTTACCTTAGT+TGG | - | chr8_4:54436735-54436754 | Msa1334130:intron | 35.0% | |
| TGGACTAAAAGAACCAACTA+AGG | + | chr8_4:54436751-54436770 | None:intergenic | 35.0% | |
| !! | CTCTTCCATTGATTTGGAAA+AGG | + | chr8_4:54436784-54436803 | None:intergenic | 35.0% |
| ! | CTTTTCCAAATCAATGGAAG+AGG | - | chr8_4:54436782-54436801 | Msa1334130:intron | 35.0% |
| AAGGCCAATATACCTCAAAA+TGG | - | chr8_4:54436909-54436928 | Msa1334130:intron | 35.0% | |
| !!! | CTCACCATTTTGAGGTATAT+TGG | + | chr8_4:54436916-54436935 | None:intergenic | 35.0% |
| CAATATACCTCAAAATGGTG+AGG | - | chr8_4:54436914-54436933 | Msa1334130:intron | 35.0% | |
| AGAAGATTAGGATGCACTAA+CGG | + | chr8_4:54437017-54437036 | None:intergenic | 35.0% | |
| TTAGTGCATCCTAATCTTCT+TGG | - | chr8_4:54437017-54437036 | Msa1334130:intron | 35.0% | |
| CGTTACTGCATTATTCGTAA+AGG | - | chr8_4:54437048-54437067 | Msa1334130:intron | 35.0% | |
| CAGTCTCATGAGAATAAATG+TGG | - | chr8_4:54437383-54437402 | Msa1334130:intron | 35.0% | |
| !!! | ACGCTTTTTTCCTACAAAGT+TGG | + | chr8_4:54437454-54437473 | None:intergenic | 35.0% |
| !!! | GCTGTGATGTTTTTTCAATG+AGG | + | chr8_4:54437578-54437597 | None:intergenic | 35.0% |
| ! | AGATTCGGATTTAAAGTCAG+AGG | + | chr8_4:54437641-54437660 | None:intergenic | 35.0% |
| GCGCCAGAAATAATAAAAAG+TGG | + | chr8_4:54437707-54437726 | None:intergenic | 35.0% | |
| !!! | CTTTTTATTATTTCTGGCGC+TGG | - | chr8_4:54437707-54437726 | Msa1334130:intron | 35.0% |
| !! | CCTTCATTTTGAAGATAAGC+AGG | + | chr8_4:54437965-54437984 | None:intergenic | 35.0% |
| CCTGCTTATCTTCAAAATGA+AGG | - | chr8_4:54437962-54437981 | Msa1334130:CDS | 35.0% | |
| !!! | AGGTTGTTGCATGTTGATTT+TGG | - | chr8_4:54438146-54438165 | Msa1334130:intron | 35.0% |
| !! | TTTTTACACAAGCTGTTTCC+AGG | + | chr8_4:54438796-54438815 | None:intergenic | 35.0% |
| GAAACAGCTTGTGTAAAAAC+AGG | - | chr8_4:54438797-54438816 | Msa1334130:intron | 35.0% | |
| GTTACACATATGAATTGTGC+AGG | + | chr8_4:54438923-54438942 | None:intergenic | 35.0% | |
| TGATGCAATATATTCCCTTG+TGG | - | chr8_4:54439271-54439290 | Msa1334130:intron | 35.0% | |
| GATGCAATATATTCCCTTGT+GGG | - | chr8_4:54439272-54439291 | Msa1334130:intron | 35.0% | |
| ! | AGCAGCGATTTTATCATCAT+CGG | - | chr8_4:54439333-54439352 | Msa1334130:intron | 35.0% |
| CTCTTAGCAAGTTGTTGATA+AGG | + | chr8_4:54439787-54439806 | None:intergenic | 35.0% | |
| !! | CTTATCAACAACTTGCTAAG+AGG | - | chr8_4:54439785-54439804 | Msa1334130:intron | 35.0% |
| ATCTAAAAGTTCACCGTCTT+CGG | + | chr8_4:54439827-54439846 | None:intergenic | 35.0% | |
| AACTTCTTACCAAGTGCTTA+CGG | + | chr8_4:54439921-54439940 | None:intergenic | 35.0% | |
| TCTAAAGGGATGAGTTAAAC+AGG | + | chr8_4:54440070-54440089 | None:intergenic | 35.0% | |
| !! | TGGATTAGCTTCTAACTTAC+AGG | + | chr8_4:54440176-54440195 | None:intergenic | 35.0% |
| ! | GTCTTCTGTAGTTTTTCTGT+CGG | - | chr8_4:54440271-54440290 | Msa1334130:intron | 35.0% |
| ! | TCTTCTGTAGTTTTTCTGTC+GGG | - | chr8_4:54440272-54440291 | Msa1334130:intron | 35.0% |
| ! | GAACTGTACTCTCCATTTTA+CGG | - | chr8_4:54440356-54440375 | Msa1334130:intron | 35.0% |
| TTTCTGCCATCATGCAAAAA+TGG | - | chr8_4:54440410-54440429 | Msa1334130:intron | 35.0% | |
| TCATAGTCAGATAATCCTGT+AGG | - | chr8_4:54440541-54440560 | Msa1334130:intron | 35.0% | |
| GTTCTGGTACATATATCTTG+TGG | - | chr8_4:54440747-54440766 | Msa1334130:intron | 35.0% | |
| ! | ACATTTTTGTGCCAAGCATA+AGG | + | chr8_4:54440798-54440817 | None:intergenic | 35.0% |
| TTATGCTTGGCACAAAAATG+TGG | - | chr8_4:54440797-54440816 | Msa1334130:intron | 35.0% | |
| ! | TAAGACTACGTTCTTTGAAG+TGG | + | chr8_4:54440883-54440902 | None:intergenic | 35.0% |
| ! | ACATTTTTGTGCCAAGCATA+AGG | + | chr8_4:54440798-54440817 | None:intergenic | 35.0% |
| TTATGCTTGGCACAAAAATG+TGG | - | chr8_4:54440797-54440816 | Msa1334130:intron | 35.0% | |
| !! | TTCTTTGAAGTGGTACCAAT+TGG | + | chr8_4:54440989-54441008 | None:intergenic | 35.0% |
| CCATAAAGAGGAGTTATCTA+GGG | - | chr8_4:54441099-54441118 | Msa1334130:CDS | 35.0% | |
| ! | TATCTAGGGCTTTGGTAAAA+AGG | - | chr8_4:54441113-54441132 | Msa1334130:CDS | 35.0% |
| GGTAAAAAGGAAAGAGTAAG+TGG | - | chr8_4:54441126-54441145 | Msa1334130:CDS | 35.0% | |
| TACAAAATCCTCCTCATTTG+AGG | - | chr8_4:54441205-54441224 | Msa1334130:CDS | 35.0% | |
| ACAAAATCCTCCTCATTTGA+GGG | - | chr8_4:54441206-54441225 | Msa1334130:CDS | 35.0% | |
| !! | ATGATTTTTGAGGGTTTTGG+GGG | - | chr8_4:54441251-54441270 | Msa1334130:CDS | 35.0% |
| ! | CTTTGGAGGTGGAAAATATA+GGG | + | chr8_4:54441411-54441430 | None:intergenic | 35.0% |
| ! | TGAACCTTTAGGCTTTGATT+GGG | + | chr8_4:54441455-54441474 | None:intergenic | 35.0% |
| ! | ATGAACCTTTAGGCTTTGAT+TGG | + | chr8_4:54441456-54441475 | None:intergenic | 35.0% |
| CAAGAAAGCAACAAACTTGA+AGG | - | chr8_4:54441533-54441552 | Msa1334130:CDS | 35.0% | |
| AGCAACAAACTTGAAGGAAA+AGG | - | chr8_4:54441539-54441558 | Msa1334130:CDS | 35.0% | |
| GCAACAAACTTGAAGGAAAA+GGG | - | chr8_4:54441540-54441559 | Msa1334130:CDS | 35.0% | |
| AAACTTGAAGGAAAAGGGAT+TGG | - | chr8_4:54441545-54441564 | Msa1334130:CDS | 35.0% | |
| AACTTGAAGGAAAAGGGATT+GGG | - | chr8_4:54441546-54441565 | Msa1334130:CDS | 35.0% | |
| CTTTAATCAAGCCAAAGGAT+TGG | + | chr8_4:54441900-54441919 | None:intergenic | 35.0% | |
| !! | CAATCCTTTGGCTTGATTAA+AGG | - | chr8_4:54441898-54441917 | Msa1334130:CDS | 35.0% |
| ATCCAAACCTAAGTTTGTCA+AGG | - | chr8_4:54442088-54442107 | Msa1334130:CDS | 35.0% | |
| TTCATGTCCTTGACAAACTT+AGG | + | chr8_4:54442098-54442117 | None:intergenic | 35.0% | |
| ! | ACATGAACTAGATAGTTTGC+TGG | - | chr8_4:54442111-54442130 | Msa1334130:CDS | 35.0% |
| !! | AACTAGATAGTTTGCTGGAA+TGG | - | chr8_4:54442116-54442135 | Msa1334130:CDS | 35.0% |
| ACCCAATTATCCAAGATTGA+TGG | - | chr8_4:54442159-54442178 | Msa1334130:CDS | 35.0% | |
| CTCCATCAATCTTGGATAAT+TGG | + | chr8_4:54442164-54442183 | None:intergenic | 35.0% | |
| CAATTATCCAAGATTGATGG+AGG | - | chr8_4:54442162-54442181 | Msa1334130:CDS | 35.0% | |
| TGAACATGAGAAACTAACTC+AGG | + | chr8_4:54442228-54442247 | None:intergenic | 35.0% | |
| AAATAGATGGGCATACGAAA+AGG | + | chr8_4:54442258-54442277 | None:intergenic | 35.0% | |
| TTTCGTATGCCCATCTATTT+AGG | - | chr8_4:54442258-54442277 | Msa1334130:CDS | 35.0% | |
| TTCGTATGCCCATCTATTTA+GGG | - | chr8_4:54442259-54442278 | Msa1334130:CDS | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr8_4:54442371-54442390 | Msa1334130:CDS | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr8_4:54442380-54442399 | None:intergenic | 35.0% | |
| CGGAAGAAGAGGAAAATAAG+TGG | + | chr8_4:54435663-54435682 | None:intergenic | 40.0% | |
| TGGATAATCAACATCCTTGC+CGG | + | chr8_4:54435683-54435702 | None:intergenic | 40.0% | |
| ! | CCCAACCAGTGTTCAAATTT+TGG | + | chr8_4:54435945-54435964 | None:intergenic | 40.0% |
| ! | ATATGCCCATCCTTTTGTTG+AGG | - | chr8_4:54436086-54436105 | Msa1334130:intron | 40.0% |
| TTAATGCAGTTGTTGTCTCG+TGG | + | chr8_4:54436182-54436201 | None:intergenic | 40.0% | |
| CGAGACAACAACTGCATTAA+TGG | - | chr8_4:54436182-54436201 | Msa1334130:intron | 40.0% | |
| GATGTAGTATCTTCTTCCAC+CGG | - | chr8_4:54436228-54436247 | Msa1334130:intron | 40.0% | |
| AGTAGAAGACCTCAAAGAAG+AGG | - | chr8_4:54436308-54436327 | Msa1334130:intron | 40.0% | |
| GTAGAAGACCTCAAAGAAGA+GGG | - | chr8_4:54436309-54436328 | Msa1334130:intron | 40.0% | |
| ! | CAGAGCATCAACAGAATTCA+AGG | - | chr8_4:54436548-54436567 | Msa1334130:intron | 40.0% |
| ATTGTCCGAATTGACAGTTC+AGG | - | chr8_4:54436576-54436595 | Msa1334130:intron | 40.0% | |
| TACCTCCTGAACTGTCAATT+CGG | + | chr8_4:54436584-54436603 | None:intergenic | 40.0% | |
| CAGTTCAGGAGGTAAATTTC+GGG | - | chr8_4:54436590-54436609 | Msa1334130:intron | 40.0% | |
| !! | TGAAGCAATGACGGGTATTT+CGG | + | chr8_4:54436655-54436674 | None:intergenic | 40.0% |
| TGCAGGATACTACTTAGCAA+CGG | - | chr8_4:54436695-54436714 | Msa1334130:intron | 40.0% | |
| ! | TGGAACCTCTTCCATTGATT+TGG | + | chr8_4:54436790-54436809 | None:intergenic | 40.0% |
| ! | GTTTGGTTGATGCTATTGGT+GGG | - | chr8_4:54436856-54436875 | Msa1334130:intron | 40.0% |
| ! | AGAGTAACCTCACCATTTTG+AGG | + | chr8_4:54436924-54436943 | None:intergenic | 40.0% |
| GAAGATTAGGATGCACTAAC+GGG | + | chr8_4:54437016-54437035 | None:intergenic | 40.0% | |
| GAGTTGTGACCAAGAAGATT+AGG | + | chr8_4:54437029-54437048 | None:intergenic | 40.0% | |
| TGCATTATTCGTAAAGGGAG+AGG | - | chr8_4:54437054-54437073 | Msa1334130:intron | 40.0% | |
| GCATTATTCGTAAAGGGAGA+GGG | - | chr8_4:54437055-54437074 | Msa1334130:intron | 40.0% | |
| CATTATTCGTAAAGGGAGAG+GGG | - | chr8_4:54437056-54437075 | Msa1334130:intron | 40.0% | |
| ATTATTCGTAAAGGGAGAGG+GGG | - | chr8_4:54437057-54437076 | Msa1334130:intron | 40.0% | |
| TGGCACTATCCCAAATTTCA+AGG | + | chr8_4:54437421-54437440 | None:intergenic | 40.0% | |
| GCGTTAAAATGTGGAATTGC+AGG | - | chr8_4:54437470-54437489 | Msa1334130:intron | 40.0% | |
| ! | AGCATACAATTTGGAACCGT+TGG | - | chr8_4:54437595-54437614 | Msa1334130:intron | 40.0% |
| ! | GCATACAATTTGGAACCGTT+GGG | - | chr8_4:54437596-54437615 | Msa1334130:intron | 40.0% |
| TTAAATCCGAATCTCCAGCA+AGG | - | chr8_4:54437647-54437666 | Msa1334130:intron | 40.0% | |
| ! | GTGAAATGCCATTTGTTTGG+CGG | + | chr8_4:54437858-54437877 | None:intergenic | 40.0% |
| ! | GTGGTGAAATGCCATTTGTT+TGG | + | chr8_4:54437861-54437880 | None:intergenic | 40.0% |
| TTGCTTAACATGTGCCCTTA+GGG | - | chr8_4:54438338-54438357 | Msa1334130:intron | 40.0% | |
| TGACAGTATATGACGACAGA+TGG | + | chr8_4:54438668-54438687 | None:intergenic | 40.0% | |
| GTCGTCATATACTGTCAATG+TGG | - | chr8_4:54438671-54438690 | Msa1334130:intron | 40.0% | |
| GCTTGTGTAAAAACAGGGTA+AGG | - | chr8_4:54438803-54438822 | Msa1334130:intron | 40.0% | |
| GCTACGTACAATACACCAAA+TGG | - | chr8_4:54438825-54438844 | Msa1334130:intron | 40.0% | |
| ACGTACAATACACCAAATGG+TGG | - | chr8_4:54438828-54438847 | Msa1334130:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr8_4:54438829-54438848 | Msa1334130:intron | 40.0% | |
| ! | TCGTTGTTTGGTGAGAGAAA+TGG | - | chr8_4:54439365-54439384 | Msa1334130:intron | 40.0% |
| ! | TCAAGGTGCTAAGAAATGCA+AGG | - | chr8_4:54439392-54439411 | Msa1334130:intron | 40.0% |
| !! | TTCACCTGGAAGCATTGAAT+TGG | - | chr8_4:54439729-54439748 | Msa1334130:intron | 40.0% |
| ! | GAAGACGGTGAACTTTTAGA+TGG | - | chr8_4:54439826-54439845 | Msa1334130:intron | 40.0% |
| TAAAGATCTCCGTAAGCACT+TGG | - | chr8_4:54439909-54439928 | Msa1334130:intron | 40.0% | |
| ! | AGCTTACAGGGAGTTTTTCA+TGG | - | chr8_4:54440119-54440138 | Msa1334130:intron | 40.0% |
| ! | GCTTACAGGGAGTTTTTCAT+GGG | - | chr8_4:54440120-54440139 | Msa1334130:intron | 40.0% |
| ! | CTTCTGTAGTTTTTCTGTCG+GGG | - | chr8_4:54440273-54440292 | Msa1334130:intron | 40.0% |
| !!! | TGTCAGCCATTTTTGCATGA+TGG | + | chr8_4:54440419-54440438 | None:intergenic | 40.0% |
| ATATTGTAGGCTGTAGCCTA+TGG | - | chr8_4:54440487-54440506 | Msa1334130:intron | 40.0% | |
| TAGCCTATGGAATTTGGTCT+CGG | - | chr8_4:54440500-54440519 | Msa1334130:intron | 40.0% | |
| TCAGATAATCCTGTAGGTCT+AGG | - | chr8_4:54440547-54440566 | Msa1334130:intron | 40.0% | |
| CAGATAATCCTGTAGGTCTA+GGG | - | chr8_4:54440548-54440567 | Msa1334130:intron | 40.0% | |
| AAGGTTACTTAGGAGCAGAA+TGG | + | chr8_4:54440779-54440798 | None:intergenic | 40.0% | |
| CTCCTAAGTAACCTTATGCT+TGG | - | chr8_4:54440784-54440803 | Msa1334130:intron | 40.0% | |
| TGCCAAGCATAAGGTTACTT+AGG | + | chr8_4:54440789-54440808 | None:intergenic | 40.0% | |
| TTGTAGTCACACACTCCAAT+TGG | - | chr8_4:54440855-54440874 | Msa1334130:intron | 40.0% | |
| !! | TTCTTTGAAGTGGTGCCAAT+TGG | + | chr8_4:54440873-54440892 | None:intergenic | 40.0% |
| TTGTAGTCACACACTCCAAT+TGG | - | chr8_4:54440855-54440874 | Msa1334130:intron | 40.0% | |
| ! | CAAGACTACGTTCTTTGAAG+TGG | + | chr8_4:54440999-54441018 | None:intergenic | 40.0% |
| CACTTCAAAGAACGTAGTCT+TGG | - | chr8_4:54440881-54440900 | Msa1334130:CDS | 40.0% | |
| GATCTATCATCTACAAGGCT+TGG | - | chr8_4:54441027-54441046 | Msa1334130:CDS | 40.0% | |
| GCCATAAAGAGGAGTTATCT+AGG | - | chr8_4:54441098-54441117 | Msa1334130:CDS | 40.0% | |
| CCCTAGATAACTCCTCTTTA+TGG | + | chr8_4:54441102-54441121 | None:intergenic | 40.0% | |
| AGAGTAAGTGGAAGAAACAG+AGG | - | chr8_4:54441138-54441157 | Msa1334130:CDS | 40.0% | |
| AAGAAACAGAGGACTTTGAG+AGG | - | chr8_4:54441149-54441168 | Msa1334130:CDS | 40.0% | |
| TTTACTTCCCTCAAATGAGG+AGG | + | chr8_4:54441216-54441235 | None:intergenic | 40.0% | |
| !!! | TGATTTTTGAGGGTTTTGGG+GGG | - | chr8_4:54441252-54441271 | Msa1334130:CDS | 40.0% |
| !! | GCTTTGGAGGTGGAAAATAT+AGG | + | chr8_4:54441412-54441431 | None:intergenic | 40.0% |
| ! | TTAGGCTTTGATTGGGAGTT+TGG | + | chr8_4:54441448-54441467 | None:intergenic | 40.0% |
| AACTCCCAATCAAAGCCTAA+AGG | - | chr8_4:54441448-54441467 | Msa1334130:CDS | 40.0% | |
| GTGTTCTGTACAATCAACTG+TGG | - | chr8_4:54441672-54441691 | Msa1334130:CDS | 40.0% | |
| TCTGTACAATCAACTGTGGT+TGG | - | chr8_4:54441676-54441695 | Msa1334130:CDS | 40.0% | |
| CTGTACAATCAACTGTGGTT+GGG | - | chr8_4:54441677-54441696 | Msa1334130:CDS | 40.0% | |
| GGTATCTGACATGTCATGAA+GGG | + | chr8_4:54441862-54441881 | None:intergenic | 40.0% | |
| TGGTATCTGACATGTCATGA+AGG | + | chr8_4:54441863-54441882 | None:intergenic | 40.0% | |
| ACATGTCAGATACCAGCATT+TGG | - | chr8_4:54441868-54441887 | Msa1334130:CDS | 40.0% | |
| ! | TTTGGAGCATACCAATCCTT+TGG | - | chr8_4:54441886-54441905 | Msa1334130:CDS | 40.0% |
| ! | ATTTTTGCCACAAGGTTCAG+AGG | - | chr8_4:54441921-54441940 | Msa1334130:CDS | 40.0% |
| !! | TTCACTTTTAGGCCACAGAA+AGG | - | chr8_4:54441966-54441985 | Msa1334130:CDS | 40.0% |
| GTCCTTGACAAACTTAGGTT+TGG | + | chr8_4:54442093-54442112 | None:intergenic | 40.0% | |
| GTAAAACCCTCCATCAATCT+TGG | + | chr8_4:54442172-54442191 | None:intergenic | 40.0% | |
| CACAATTTATAGAAGCTGGG+TGG | - | chr8_4:54442309-54442328 | Msa1334130:CDS | 40.0% | |
| AGCAGGTGATATACAGCGAT+CGG | + | chr8_4:54435503-54435522 | None:intergenic | 45.0% | |
| AGGGGTTTATGAATGGTAGC+AGG | + | chr8_4:54435520-54435539 | None:intergenic | 45.0% | |
| ! | ATTTTCCTCTTCTTCCGGCA+AGG | - | chr8_4:54435666-54435685 | Msa1334130:three_prime_UTR | 45.0% |
| TACTTCTTCAAGCCAGAGTG+TGG | + | chr8_4:54435727-54435746 | None:intergenic | 45.0% | |
| !! | CTCTGGCTTGAAGAAGTATC+TGG | - | chr8_4:54435729-54435748 | Msa1334130:three_prime_UTR | 45.0% |
| ! | CGTTTTTAACACCCTCTGAG+GGG | + | chr8_4:54435780-54435799 | None:intergenic | 45.0% |
| !! | CCGTTTTTAACACCCTCTGA+GGG | + | chr8_4:54435781-54435800 | None:intergenic | 45.0% |
| !! | CCCTCAGAGGGTGTTAAAAA+CGG | - | chr8_4:54435778-54435797 | Msa1334130:CDS | 45.0% |
| !! | TAGGGTGTCGGATATTATGC+CGG | + | chr8_4:54435827-54435846 | None:intergenic | 45.0% |
| TACCTCTGAATCGGTGTGTA+GGG | + | chr8_4:54435845-54435864 | None:intergenic | 45.0% | |
| ATACCTCTGAATCGGTGTGT+AGG | + | chr8_4:54435846-54435865 | None:intergenic | 45.0% | |
| ACCTACTTGAAGGAAAGGCT+TGG | - | chr8_4:54436369-54436388 | Msa1334130:intron | 45.0% | |
| CCTACTTGAAGGAAAGGCTT+GGG | - | chr8_4:54436370-54436389 | Msa1334130:intron | 45.0% | |
| CTACTTGAAGGAAAGGCTTG+GGG | - | chr8_4:54436371-54436390 | Msa1334130:intron | 45.0% | |
| CGCGTTAGTAAATCGACTGT+TGG | - | chr8_4:54436432-54436451 | Msa1334130:intron | 45.0% | |
| ATAGCCATCATTCGAGTCTC+AGG | - | chr8_4:54436480-54436499 | Msa1334130:intron | 45.0% | |
| TAGCCATCATTCGAGTCTCA+GGG | - | chr8_4:54436481-54436500 | Msa1334130:intron | 45.0% | |
| GCAGGATACTACTTAGCAAC+GGG | - | chr8_4:54436696-54436715 | Msa1334130:intron | 45.0% | |
| ATCAATGGAAGAGGTTCCAC+AGG | - | chr8_4:54436791-54436810 | Msa1334130:intron | 45.0% | |
| TCAATGGAAGAGGTTCCACA+GGG | - | chr8_4:54436792-54436811 | Msa1334130:intron | 45.0% | |
| !! | CTCGGTTTGGTTGATGCTAT+TGG | - | chr8_4:54436852-54436871 | Msa1334130:intron | 45.0% |
| ! | GGTTTGGTTGATGCTATTGG+TGG | - | chr8_4:54436855-54436874 | Msa1334130:intron | 45.0% |
| TTAAATTCCTCCTCCTCCCA+GGG | + | chr8_4:54436978-54436997 | None:intergenic | 45.0% | |
| ATTAAATTCCTCCTCCTCCC+AGG | + | chr8_4:54436979-54436998 | None:intergenic | 45.0% | |
| TTATTCGTAAAGGGAGAGGG+GGG | - | chr8_4:54437058-54437077 | Msa1334130:intron | 45.0% | |
| ! | GAGGGGGGATATTTTCTTGT+TGG | - | chr8_4:54437073-54437092 | Msa1334130:intron | 45.0% |
| ACAAAGTTGGCAGTGCAAGT+TGG | + | chr8_4:54437441-54437460 | None:intergenic | 45.0% | |
| ACTTGCACTGCCAACTTTGT+AGG | - | chr8_4:54437441-54437460 | Msa1334130:intron | 45.0% | |
| AATGAGGTGATGACATCGTG+TGG | + | chr8_4:54437562-54437581 | None:intergenic | 45.0% | |
| ! | AGCAGAATAGATGTGGTGGA+TGG | + | chr8_4:54437782-54437801 | None:intergenic | 45.0% |
| GTTCAGCAGAATAGATGTGG+TGG | + | chr8_4:54437786-54437805 | None:intergenic | 45.0% | |
| GGTGTTCAGCAGAATAGATG+TGG | + | chr8_4:54437789-54437808 | None:intergenic | 45.0% | |
| TGACGTTTCCGCCAAACAAA+TGG | - | chr8_4:54437847-54437866 | Msa1334130:intron | 45.0% | |
| ATCCAGTTCGTAGATGACAG+TGG | + | chr8_4:54437880-54437899 | None:intergenic | 45.0% | |
| CTGTCATCTACGAACTGGAT+CGG | - | chr8_4:54437880-54437899 | Msa1334130:intron | 45.0% | |
| TGTCATCTACGAACTGGATC+GGG | - | chr8_4:54437881-54437900 | Msa1334130:intron | 45.0% | |
| TTAGCAGCCAATCAGGGAAT+AGG | + | chr8_4:54437924-54437943 | None:intergenic | 45.0% | |
| CCGTATTTAGCAGCCAATCA+GGG | + | chr8_4:54437930-54437949 | None:intergenic | 45.0% | |
| ! | CCCTGATTGGCTGCTAAATA+CGG | - | chr8_4:54437927-54437946 | Msa1334130:intron | 45.0% |
| TCCGTATTTAGCAGCCAATC+AGG | + | chr8_4:54437931-54437950 | None:intergenic | 45.0% | |
| GTTGCTTAACATGTGCCCTT+AGG | - | chr8_4:54438337-54438356 | Msa1334130:intron | 45.0% | |
| ! | CAAGCTAACTTGTGCCCTAA+GGG | + | chr8_4:54438355-54438374 | None:intergenic | 45.0% |
| ! | TCAAGCTAACTTGTGCCCTA+AGG | + | chr8_4:54438356-54438375 | None:intergenic | 45.0% |
| TCAGAGTACACCTCAAGAGT+AGG | + | chr8_4:54438577-54438596 | None:intergenic | 45.0% | |
| GTTTCGAATGCTACGAGACA+TGG | - | chr8_4:54438598-54438617 | Msa1334130:CDS | 45.0% | |
| GAGATGTATCGAAGCTTGCA+AGG | - | chr8_4:54438626-54438645 | Msa1334130:CDS | 45.0% | |
| TGTATCGAAGCTTGCAAGGT+TGG | - | chr8_4:54438630-54438649 | Msa1334130:CDS | 45.0% | |
| TATATGACGACAGATGGAGC+TGG | + | chr8_4:54438662-54438681 | None:intergenic | 45.0% | |
| TCGTGCAGTACACGAATATG+TGG | + | chr8_4:54438710-54438729 | None:intergenic | 45.0% | |
| ACATATTCGTGTACTGCACG+AGG | - | chr8_4:54438709-54438728 | Msa1334130:intron | 45.0% | |
| CATATTCGTGTACTGCACGA+GGG | - | chr8_4:54438710-54438729 | Msa1334130:intron | 45.0% | |
| ATATTCGTGTACTGCACGAG+GGG | - | chr8_4:54438711-54438730 | Msa1334130:intron | 45.0% | |
| GTTGTTGTCATGTGACCGTA+AGG | - | chr8_4:54438756-54438775 | Msa1334130:intron | 45.0% | |
| TTCCACTTCAGAACCCACAA+GGG | + | chr8_4:54439288-54439307 | None:intergenic | 45.0% | |
| TTTCCACTTCAGAACCCACA+AGG | + | chr8_4:54439289-54439308 | None:intergenic | 45.0% | |
| !! | GTGGGTTCTGAAGTGGAAAT+TGG | - | chr8_4:54439290-54439309 | Msa1334130:intron | 45.0% |
| CGGTAAGTGGTATCGTTGTT+TGG | - | chr8_4:54439353-54439372 | Msa1334130:intron | 45.0% | |
| GTGAGAGAAATGGCGAATCA+AGG | - | chr8_4:54439375-54439394 | Msa1334130:intron | 45.0% | |
| TGTTGCAGGCGATGATGATA+TGG | + | chr8_4:54439449-54439468 | None:intergenic | 45.0% | |
| CAAGCCAATTCAATGCTTCC+AGG | + | chr8_4:54439736-54439755 | None:intergenic | 45.0% | |
| !! | CTGGAAGCATTGAATTGGCT+TGG | - | chr8_4:54439734-54439753 | Msa1334130:intron | 45.0% |
| AAGCCTAGCTATACCGAAGA+CGG | - | chr8_4:54439811-54439830 | Msa1334130:intron | 45.0% | |
| ! | GACGGTGAACTTTTAGATGG+TGG | - | chr8_4:54439829-54439848 | Msa1334130:intron | 45.0% |
| !!! | TGGTGGTTTTGATATGACCC+TGG | - | chr8_4:54439846-54439865 | Msa1334130:intron | 45.0% |
| TATGACCCTGGTGAAGTTTG+CGG | - | chr8_4:54439858-54439877 | Msa1334130:intron | 45.0% | |
| GGTATGACTGTCTTGTCTTG+TGG | - | chr8_4:54439880-54439899 | Msa1334130:intron | 45.0% | |
| AGGCTGTAGCCTATGGAATT+TGG | - | chr8_4:54440494-54440513 | Msa1334130:intron | 45.0% | |
| AGCCTATGGAATTTGGTCTC+GGG | - | chr8_4:54440501-54440520 | Msa1334130:intron | 45.0% | |
| ATCCCGAGACCAAATTCCAT+AGG | + | chr8_4:54440506-54440525 | None:intergenic | 45.0% | |
| TAAGAGTTCCCTAGACCTAC+AGG | + | chr8_4:54440559-54440578 | None:intergenic | 45.0% | |
| CCAGAACTTTCCAGAGATGA+TGG | + | chr8_4:54440734-54440753 | None:intergenic | 45.0% | |
| ! | CCATCATCTCTGGAAAGTTC+TGG | - | chr8_4:54440731-54440750 | Msa1334130:intron | 45.0% |
| ! | AGAGGAGTTATCTAGGGCTT+TGG | - | chr8_4:54441105-54441124 | Msa1334130:CDS | 45.0% |
| ! | ACTTTGAGAGGAGAGAGCTT+TGG | - | chr8_4:54441161-54441180 | Msa1334130:CDS | 45.0% |
| ! | CTTTGAGAGGAGAGAGCTTT+GGG | - | chr8_4:54441162-54441181 | Msa1334130:CDS | 45.0% |
| TTTGAGAGGAGAGAGCTTTG+GGG | - | chr8_4:54441163-54441182 | Msa1334130:CDS | 45.0% | |
| CTTTGATTGGGAGTTTGGAG+GGG | + | chr8_4:54441443-54441462 | None:intergenic | 45.0% | |
| GCTTTGATTGGGAGTTTGGA+GGG | + | chr8_4:54441444-54441463 | None:intergenic | 45.0% | |
| CCATTGTGAGAGAAGTCACT+AGG | + | chr8_4:54441623-54441642 | None:intergenic | 45.0% | |
| CCTAGTGACTTCTCTCACAA+TGG | - | chr8_4:54441620-54441639 | Msa1334130:CDS | 45.0% | |
| TGCAACAACCTTCACTGACA+CGG | - | chr8_4:54441831-54441850 | Msa1334130:CDS | 45.0% | |
| GATTGGTATGCTCCAAATGC+TGG | + | chr8_4:54441883-54441902 | None:intergenic | 45.0% | |
| ! | ATCTTTTCCCTCTTCTTGCG+GGG | + | chr8_4:54442056-54442075 | None:intergenic | 45.0% |
| ! | CATCTTTTCCCTCTTCTTGC+GGG | + | chr8_4:54442057-54442076 | None:intergenic | 45.0% |
| ! | CCATCTTTTCCCTCTTCTTG+CGG | + | chr8_4:54442058-54442077 | None:intergenic | 45.0% |
| GAGGGAAAAGATGGAGAAGA+AGG | - | chr8_4:54442064-54442083 | Msa1334130:CDS | 45.0% | |
| TAGAAGCTGGGTGGTTGAAA+TGG | - | chr8_4:54442318-54442337 | Msa1334130:CDS | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr8_4:54442332-54442351 | Msa1334130:CDS | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr8_4:54442351-54442370 | None:intergenic | 45.0% | |
| GTCACAGCGTTCATCTCTCA+TGG | - | chr8_4:54435477-54435496 | Msa1334130:three_prime_UTR | 50.0% | |
| CTCGTGCGGTAGAATTTGAG+GGG | + | chr8_4:54435538-54435557 | None:intergenic | 50.0% | |
| GCTCGTGCGGTAGAATTTGA+GGG | + | chr8_4:54435539-54435558 | None:intergenic | 50.0% | |
| AACATCCTTGCCGGAAGAAG+AGG | + | chr8_4:54435674-54435693 | None:intergenic | 50.0% | |
| !!! | GCCGTTTTTAACACCCTCTG+AGG | + | chr8_4:54435782-54435801 | None:intergenic | 50.0% |
| TGAATCGGTGTGTAGGGTGT+CGG | + | chr8_4:54435839-54435858 | None:intergenic | 50.0% | |
| CCCAAGCCTTTCCTTCAAGT+AGG | + | chr8_4:54436373-54436392 | None:intergenic | 50.0% | |
| AGACCCTGAGACTCGAATGA+TGG | + | chr8_4:54436487-54436506 | None:intergenic | 50.0% | |
| GTCCGAATTGACAGTTCAGG+AGG | - | chr8_4:54436579-54436598 | Msa1334130:intron | 50.0% | |
| TCTGATGTGGCAACAAGTGC+AGG | - | chr8_4:54436678-54436697 | Msa1334130:intron | 50.0% | |
| TACTACTTAGCAACGGGAGC+AGG | - | chr8_4:54436702-54436721 | Msa1334130:intron | 50.0% | |
| CAATGGAAGAGGTTCCACAG+GGG | - | chr8_4:54436793-54436812 | Msa1334130:intron | 50.0% | |
| GGTAAGGACGCAACATCTCT+CGG | - | chr8_4:54436834-54436853 | Msa1334130:intron | 50.0% | |
| TACCCTGTCCAACTTTACCC+TGG | - | chr8_4:54436958-54436977 | Msa1334130:intron | 50.0% | |
| ACCCTGTCCAACTTTACCCT+GGG | - | chr8_4:54436959-54436978 | Msa1334130:intron | 50.0% | |
| TCCCAGGGTAAAGTTGGACA+GGG | + | chr8_4:54436963-54436982 | None:intergenic | 50.0% | |
| AGGTGATGACATCGTGTGGA+TGG | + | chr8_4:54437558-54437577 | None:intergenic | 50.0% | |
| GAATAAGAGGCTGACCTTGC+TGG | + | chr8_4:54437664-54437683 | None:intergenic | 50.0% | |
| GACGGCAAGAGAGGAAATCA+CGG | + | chr8_4:54437742-54437761 | None:intergenic | 50.0% | |
| TTTCCTCTCTTGCCGTCACT+TGG | - | chr8_4:54437745-54437764 | Msa1334130:intron | 50.0% | |
| GCCAATAGCAGACCAAGTGA+CGG | + | chr8_4:54437760-54437779 | None:intergenic | 50.0% | |
| ATTGTTGTAGCAGTGCGCAG+AGG | + | chr8_4:54437824-54437843 | None:intergenic | 50.0% | |
| CACCACTGTCATCTACGAAC+TGG | - | chr8_4:54437875-54437894 | Msa1334130:intron | 50.0% | |
| GGAATAGGCTTTGCCAACAG+TGG | + | chr8_4:54437909-54437928 | None:intergenic | 50.0% | |
| GGCAAAGCCTATTCCCTGAT+TGG | - | chr8_4:54437914-54437933 | Msa1334130:intron | 50.0% | |
| CTCAAGAGTAGGCGCACATA+TGG | + | chr8_4:54438566-54438585 | None:intergenic | 50.0% | |
| CATATGTGCGCCTACTCTTG+AGG | - | chr8_4:54438564-54438583 | Msa1334130:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr8_4:54438740-54438759 | None:intergenic | 50.0% | |
| GTCATGTGACCGTAAGGTCA+CGG | - | chr8_4:54438762-54438781 | Msa1334130:intron | 50.0% | |
| TCATGTGACCGTAAGGTCAC+GGG | - | chr8_4:54438763-54438782 | Msa1334130:intron | 50.0% | |
| GACTTGAACCCGTGACCTTA+CGG | + | chr8_4:54438774-54438793 | None:intergenic | 50.0% | |
| ! | AGAGGTGGAAGCAGTGTTGA+TGG | - | chr8_4:54439212-54439231 | Msa1334130:intron | 50.0% |
| !! | TTCCCTTGTGGGTTCTGAAG+TGG | - | chr8_4:54439283-54439302 | Msa1334130:intron | 50.0% |
| ! | GATGATGATATGGCGGAGCT+TGG | + | chr8_4:54439439-54439458 | None:intergenic | 50.0% |
| TGCAGGCGATGATGATATGG+CGG | + | chr8_4:54439446-54439465 | None:intergenic | 50.0% | |
| TCTTCCATTCCAGCTTCACC+TGG | - | chr8_4:54439715-54439734 | Msa1334130:intron | 50.0% | |
| TCAATGCTTCCAGGTGAAGC+TGG | + | chr8_4:54439727-54439746 | None:intergenic | 50.0% | |
| TCACCGTCTTCGGTATAGCT+AGG | + | chr8_4:54439817-54439836 | None:intergenic | 50.0% | |
| ATGACCCTGGTGAAGTTTGC+GGG | - | chr8_4:54439859-54439878 | Msa1334130:intron | 50.0% | |
| CATACCCGCAAACTTCACCA+GGG | + | chr8_4:54439866-54439885 | None:intergenic | 50.0% | |
| TCATACCCGCAAACTTCACC+AGG | + | chr8_4:54439867-54439886 | None:intergenic | 50.0% | |
| CAAGTCGCTTCCATCATCTC+TGG | - | chr8_4:54440721-54440740 | Msa1334130:intron | 50.0% | |
| ! | TTGAGAGGAGAGAGCTTTGG+GGG | - | chr8_4:54441164-54441183 | Msa1334130:CDS | 50.0% |
| ! | GGCTTTGATTGGGAGTTTGG+AGG | + | chr8_4:54441445-54441464 | None:intergenic | 50.0% |
| AAGGGATTGGGTCGCTAAAC+AGG | - | chr8_4:54441558-54441577 | Msa1334130:CDS | 50.0% | |
| TGCCACAAGGTTCAGAGGTA+TGG | - | chr8_4:54441926-54441945 | Msa1334130:CDS | 50.0% | |
| GACCATACCTCTGAACCTTG+TGG | + | chr8_4:54441931-54441950 | None:intergenic | 50.0% | |
| ! | CAGAGGTATGGTCAACGTCT+TGG | - | chr8_4:54441938-54441957 | Msa1334130:CDS | 50.0% |
| TGAAAAGACCCCGCAAGAAG+AGG | - | chr8_4:54442045-54442064 | Msa1334130:CDS | 50.0% | |
| GAAAAGACCCCGCAAGAAGA+GGG | - | chr8_4:54442046-54442065 | Msa1334130:CDS | 50.0% | |
| CCGCAAGAAGAGGGAAAAGA+TGG | - | chr8_4:54442055-54442074 | Msa1334130:CDS | 50.0% | |
| CGCTCGTGCGGTAGAATTTG+AGG | + | chr8_4:54435540-54435559 | None:intergenic | 55.0% | |
| !! | CACCCTACACACCGATTCAG+AGG | - | chr8_4:54435840-54435859 | Msa1334130:intron | 55.0% |
| GAAGAGGTTCCACAGGGGAA+GGG | - | chr8_4:54436798-54436817 | Msa1334130:intron | 55.0% | |
| AAGAGGTTCCACAGGGGAAG+GGG | - | chr8_4:54436799-54436818 | Msa1334130:intron | 55.0% | |
| !! | GGGGAAGGTTTGGACTGGTA+AGG | - | chr8_4:54436818-54436837 | Msa1334130:intron | 55.0% |
| GGACGCAACATCTCTCGGTT+TGG | - | chr8_4:54436839-54436858 | Msa1334130:intron | 55.0% | |
| CTCCCAGGGTAAAGTTGGAC+AGG | + | chr8_4:54436964-54436983 | None:intergenic | 55.0% | |
| CTGTCCAACTTTACCCTGGG+AGG | - | chr8_4:54436962-54436981 | Msa1334130:intron | 55.0% | |
| TCCAACTTTACCCTGGGAGG+AGG | - | chr8_4:54436965-54436984 | Msa1334130:intron | 55.0% | |
| TCCTCCTCCCAGGGTAAAGT+TGG | + | chr8_4:54436969-54436988 | None:intergenic | 55.0% | |
| AACTTTACCCTGGGAGGAGG+AGG | - | chr8_4:54436968-54436987 | Msa1334130:intron | 55.0% | |
| GGCTGACCTTGCTGGAGATT+CGG | + | chr8_4:54437656-54437675 | None:intergenic | 55.0% | |
| AGACCAAGTGACGGCAAGAG+AGG | + | chr8_4:54437751-54437770 | None:intergenic | 55.0% | |
| GCCGTCACTTGGTCTGCTAT+TGG | - | chr8_4:54437756-54437775 | Msa1334130:intron | 55.0% | |
| ACTGGATCGGGAACCACTGT+TGG | - | chr8_4:54437893-54437912 | Msa1334130:intron | 55.0% | |
| TACTGCACGAGGGGTAACCT+TGG | - | chr8_4:54438720-54438739 | Msa1334130:intron | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr8_4:54438775-54438794 | Msa1334130:intron | 55.0% | |
| ! | CAAATGGTGGGACCCCTTCT+CGG | - | chr8_4:54438841-54438860 | Msa1334130:intron | 55.0% |
| CATATGCAGGGTCCGAGAAG+GGG | + | chr8_4:54438856-54438875 | None:intergenic | 55.0% | |
| GCATATGCAGGGTCCGAGAA+GGG | + | chr8_4:54438857-54438876 | None:intergenic | 55.0% | |
| CTTCTCGGACCCTGCATATG+CGG | - | chr8_4:54438856-54438875 | Msa1334130:intron | 55.0% | |
| TTCTCGGACCCTGCATATGC+GGG | - | chr8_4:54438857-54438876 | Msa1334130:intron | 55.0% | |
| CTGAAGCTCCCGCATATGCA+GGG | + | chr8_4:54438868-54438887 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATATGC+AGG | + | chr8_4:54438869-54438888 | None:intergenic | 55.0% | |
| GCTTCCAGGTGAAGCTGGAA+TGG | + | chr8_4:54439722-54439741 | None:intergenic | 55.0% | |
| !! | TGAGAGGAGAGAGCTTTGGG+GGG | - | chr8_4:54441165-54441184 | Msa1334130:CDS | 55.0% |
| TGATTGGGAGTTTGGAGGGG+AGG | + | chr8_4:54441440-54441459 | None:intergenic | 55.0% | |
| GGATTGGGTCGCTAAACAGG+AGG | - | chr8_4:54441561-54441580 | Msa1334130:CDS | 55.0% | |
| TTGGGTCGCTAAACAGGAGG+AGG | - | chr8_4:54441564-54441583 | Msa1334130:CDS | 55.0% | |
| GCGGTGATATTGCGCTCGTG+CGG | + | chr8_4:54435552-54435571 | None:intergenic | 60.0% | |
| TCTGCTAGCACTCCCCTCAG+AGG | - | chr8_4:54435765-54435784 | Msa1334130:CDS | 60.0% | |
| CTGCTAGCACTCCCCTCAGA+GGG | - | chr8_4:54435766-54435785 | Msa1334130:CDS | 60.0% | |
| GGAAGAGGTTCCACAGGGGA+AGG | - | chr8_4:54436797-54436816 | Msa1334130:intron | 60.0% | |
| CAAACCTTCCCCTTCCCCTG+TGG | + | chr8_4:54436810-54436829 | None:intergenic | 60.0% | |
| CACAGGGGAAGGGGAAGGTT+TGG | - | chr8_4:54436808-54436827 | Msa1334130:intron | 60.0% | |
| GGGAAGGGGAAGGTTTGGAC+TGG | - | chr8_4:54436813-54436832 | Msa1334130:intron | 60.0% | |
| GCGCAGAGGACGAGAATGTG+AGG | + | chr8_4:54437810-54437829 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr8_4:54438729-54438748 | Msa1334130:intron | 60.0% | |
| CGAGAAGGGGTCCCACCATT+TGG | + | chr8_4:54438843-54438862 | None:intergenic | 60.0% | |
| CGCATATGCAGGGTCCGAGA+AGG | + | chr8_4:54438858-54438877 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr8_4:54438873-54438892 | Msa1334130:intron | 60.0% | |
| GGAGTTTGGAGGGGAGGAGA+GGG | + | chr8_4:54441434-54441453 | None:intergenic | 60.0% | |
| GGGAGCAACCGTGTCAGTGA+AGG | + | chr8_4:54441842-54441861 | None:intergenic | 60.0% | |
| GGTTCCACAGGGGAAGGGGA+AGG | - | chr8_4:54436803-54436822 | Msa1334130:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr8_4:54438874-54438893 | Msa1334130:intron | 65.0% | |
| !! | GGAGGAGAGGGCTTTGGAGG+TGG | + | chr8_4:54441422-54441441 | None:intergenic | 65.0% |
| ! | AGGGGAGGAGAGGGCTTTGG+AGG | + | chr8_4:54441425-54441444 | None:intergenic | 65.0% |
| TGGAGGGGAGGAGAGGGCTT+TGG | + | chr8_4:54441428-54441447 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAGGAG+AGG | + | chr8_4:54441435-54441454 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 54435475 | 54442403 | 54435475 | ID=Msa1334130;Name=Msa1334130 |
| chr8_4 | mRNA | 54435475 | 54442403 | 54435475 | ID=Msa1334130-mRNA-1;Parent=Msa1334130;Name=Msa1334130-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.14|0.25|0.87|1|1|8|282|725 |
| chr8_4 | exon | 54435475 | 54435847 | 54435475 | ID=Msa1334130-mRNA-1:exon:16951;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54435919 | 54436001 | 54435919 | ID=Msa1334130-mRNA-1:exon:16950;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54437110 | 54437194 | 54437110 | ID=Msa1334130-mRNA-1:exon:16949;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54437333 | 54437382 | 54437333 | ID=Msa1334130-mRNA-1:exon:16948;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54437948 | 54438106 | 54437948 | ID=Msa1334130-mRNA-1:exon:16947;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54438192 | 54438262 | 54438192 | ID=Msa1334130-mRNA-1:exon:16946;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54438567 | 54438664 | 54438567 | ID=Msa1334130-mRNA-1:exon:16945;Parent=Msa1334130-mRNA-1 |
| chr8_4 | exon | 54440863 | 54442403 | 54440863 | ID=Msa1334130-mRNA-1:exon:16944;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54440863 | 54442403 | 54440863 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54438567 | 54438664 | 54438567 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54438192 | 54438262 | 54438192 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54437948 | 54438106 | 54437948 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54437333 | 54437382 | 54437333 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54437110 | 54437194 | 54437110 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54435919 | 54436001 | 54435919 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | CDS | 54435757 | 54435847 | 54435757 | ID=Msa1334130-mRNA-1:cds;Parent=Msa1334130-mRNA-1 |
| chr8_4 | three_prime_UTR | 54435475 | 54435756 | 54435475 | ID=Msa1334130-mRNA-1:three_prime_utr;Parent=Msa1334130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
