AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1360160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360160 MtrunA17_Chr5g0405741 100.000 336 0 0 208 543 314 649 0.0 683
Msa1360160 MtrunA17_Chr5g0405741 97.585 207 4 1 1 207 1 206 2.88e-142 425
Msa1360160 MtrunA17_Chr7g0250681 43.653 323 172 3 212 525 514 835 8.13e-81 270
Msa1360160 MtrunA17_Chr7g0250681 54.237 59 27 0 1 59 1 59 3.25e-12 69.3
Msa1360160 MtrunA17_Chr8g0335341 40.719 334 182 5 212 529 386 719 9.85e-75 251
Msa1360160 MtrunA17_Chr8g0335341 52.542 59 28 0 1 59 1 59 2.21e-11 66.6
Msa1360160 MtrunA17_Chr2g0303521 34.375 320 201 2 213 529 320 633 6.24e-52 187
Msa1360160 MtrunA17_Chr2g0331821 31.889 323 211 2 209 522 423 745 2.59e-41 159
Msa1360160 MtrunA17_Chr2g0331821 50.847 59 29 0 1 59 1 59 7.62e-13 71.2
Msa1360160 MtrunA17_Chr3g0139411 30.960 323 211 4 212 525 381 700 1.78e-39 153
Msa1360160 MtrunA17_Chr1g0211271 28.182 330 222 4 209 527 392 717 1.54e-37 147
Msa1360160 MtrunA17_Chr3g0124841 25.309 324 227 3 216 525 577 899 2.22e-34 138
Msa1360160 MtrunA17_Chr4g0004471 29.745 353 219 9 177 518 205 539 7.28e-28 117
Msa1360160 MtrunA17_Chr5g0448571 27.966 236 150 5 212 435 460 687 1.61e-23 105
Msa1360160 MtrunA17_Chr5g0440551 33.005 203 127 4 209 403 451 652 8.86e-22 99.8
Msa1360160 MtrunA17_Chr8g0382541 30.994 171 103 3 267 427 1 166 1.38e-20 90.9
Msa1360160 MtrunA17_Chr3g0118401 30.317 221 143 4 212 423 470 688 4.88e-20 94.4
Msa1360160 MtrunA17_Chr2g0298171 26.667 225 137 7 212 414 650 868 5.40e-20 94.4
Msa1360160 MtrunA17_Chr3g0143731 25.000 320 211 5 216 530 389 684 1.45e-19 92.4
Msa1360160 MtrunA17_Chr3g0130761 23.284 335 229 6 207 525 452 774 9.90e-19 90.1
Msa1360160 MtrunA17_Chr4g0072011 25.229 218 151 3 212 417 445 662 5.87e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1360160 AT3G51290.3 72.024 336 88 2 209 543 310 640 9.76e-175 508
Msa1360160 AT3G51290.3 43.458 214 102 3 1 207 1 202 8.27e-24 105
Msa1360160 AT3G51290.2 72.205 331 85 2 209 537 310 635 1.13e-168 498
Msa1360160 AT3G51290.2 43.458 214 102 3 1 207 1 202 3.25e-23 104
Msa1360160 AT3G51290.1 70.238 336 88 3 209 543 310 634 7.99e-166 485
Msa1360160 AT3G51290.1 43.458 214 102 3 1 207 1 202 6.93e-24 106
Msa1360160 AT1G02110.1 42.470 332 180 5 205 529 372 699 4.78e-79 262
Msa1360160 AT1G02110.1 52.542 59 28 0 1 59 1 59 6.61e-11 65.5
Msa1360160 AT3G60320.1 40.426 329 185 5 212 529 464 792 8.79e-70 239
Msa1360160 AT3G60320.1 43.750 112 52 3 1 101 1 112 7.54e-11 65.5
Msa1360160 AT2G34670.2 37.695 321 196 3 208 525 355 674 1.68e-61 215
Msa1360160 AT5G25590.1 31.003 329 207 4 212 525 435 758 3.14e-39 153
Msa1360160 AT1G52320.1 28.324 346 227 5 209 539 429 768 7.96e-38 149
Msa1360160 AT1G52320.2 28.324 346 227 5 209 539 452 791 1.37e-37 148
Msa1360160 AT1G52320.5 28.324 346 227 5 209 539 452 791 1.37e-37 148
Msa1360160 AT1G52320.3 28.529 340 222 5 212 536 129 462 8.66e-37 142
Msa1360160 AT1G52320.4 28.529 340 222 5 212 536 129 462 8.66e-37 142
Msa1360160 AT1G21740.1 26.269 335 227 5 208 525 610 941 3.28e-36 144
Msa1360160 AT2G34670.1 38.830 188 114 1 208 395 355 541 4.50e-35 139
Msa1360160 AT1G77500.1 26.183 317 211 4 216 525 570 870 5.32e-28 119
Msa1360160 AT4G35240.4 24.691 324 216 5 212 528 528 830 5.83e-27 116
Msa1360160 AT4G35240.3 24.691 324 216 5 212 528 528 830 5.83e-27 116
Msa1360160 AT4G35240.2 29.557 203 136 2 212 407 528 730 6.50e-27 116
Msa1360160 AT4G35240.1 29.557 203 136 2 212 407 528 730 6.50e-27 116
Msa1360160 AT2G27090.2 29.339 242 163 2 208 442 446 686 4.69e-23 103
Msa1360160 AT2G27090.1 29.339 242 163 2 208 442 446 686 4.69e-23 103
Msa1360160 AT1G20530.1 29.004 231 157 4 212 438 332 559 1.38e-22 102
Msa1360160 AT2G17110.1 29.187 209 132 3 212 408 425 629 6.59e-22 100
Msa1360160 AT5G54480.1 25.106 235 169 2 212 446 422 649 7.19e-19 90.9
Msa1360160 AT4G39790.1 28.019 207 132 4 209 403 394 595 1.48e-18 89.7
Msa1360160 AT4G30130.3 32.273 220 134 6 212 417 423 641 1.64e-18 89.7
Msa1360160 AT4G30130.1 32.273 220 134 6 212 417 423 641 1.64e-18 89.7
Msa1360160 AT2G19090.1 27.391 230 140 4 209 417 501 724 3.14e-15 79.3

Find 192 sgRNAs with CRISPR-Local

Find 747 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATCTGGTTGGGATTTC+TGG -0.014409 tig0016950:+6490 Msa1360160:CDS
CAACTCATTGAGCTTGTTAA+AGG 0.192022 tig0016950:+13932 Msa1360160:CDS
CCGCTGAAATCGTTAAATTA+AGG 0.198328 tig0016950:+13891 Msa1360160:CDS
TAAGAGGGTTTCGGCTAAAT+TGG 0.237736 tig0016950:-15594 None:intergenic
GGTGGTTCAGCTTAGATCTT+TGG 0.258572 tig0016950:+15813 Msa1360160:CDS
CCTTCAGATGCTACTTTGTC+TGG 0.291223 tig0016950:-15685 None:intergenic
GGAGCACGGGGCGGCGGAGG+TGG 0.301210 tig0016950:-6333 None:intergenic
TTCCGTGAAACGCGGTAGTA+TGG 0.301653 tig0016950:+16485 Msa1360160:three_prime_UTR
TTCATCTGGTTGGGATTTCT+GGG 0.302684 tig0016950:+6491 Msa1360160:CDS
TGGTGGTGCGGCGGCGAGTA+TGG 0.305131 tig0016950:+6617 Msa1360160:CDS
AGTTCTTATACTTGGACTTC+TGG 0.309645 tig0016950:+6402 Msa1360160:CDS
CGGCATTGGCGACGGAGCAC+GGG 0.323976 tig0016950:-6346 None:intergenic
GGTGGTGGCGGTGGAGGAGG+CGG 0.335791 tig0016950:-6453 None:intergenic
GCGGCATTGGCGACGGAGCA+CGG 0.336776 tig0016950:-6347 None:intergenic
AACTCCGGCGAGTGGGGTGG+TGG 0.337892 tig0016950:+6641 Msa1360160:CDS
CTAGTTTGAGTTCTTATACT+TGG 0.340909 tig0016950:+6394 Msa1360160:CDS
GGAAGAATGGGTTGTGGCTC+AGG 0.343501 tig0016950:-6312 None:intergenic
GGAGGTGGTGGCGGTGGAGG+AGG 0.350539 tig0016950:-6456 None:intergenic
GGCGGTGGAGGTGGTGGCGG+TGG 0.352376 tig0016950:-6462 None:intergenic
ATGTCCGTGCCAATGCTTCA+TGG 0.353967 tig0016950:+16326 Msa1360160:three_prime_UTR
GGTGGAGGTGGTGGCGGTGG+AGG 0.360162 tig0016950:-6459 None:intergenic
ATTCGTTCTCTTCGTTCAAC+TGG 0.361840 tig0016950:+6228 Msa1360160:CDS
TTGTTCTACTAAGAGGGTTT+CGG 0.362841 tig0016950:-15603 None:intergenic
GGTGGTGGTGGCGGCGGCAT+TGG 0.364079 tig0016950:-6360 None:intergenic
GACATTGAATAACTTGCAAA+TGG 0.364382 tig0016950:+15996 Msa1360160:CDS
GCCGGTGATTTCATCTGGTT+GGG 0.365383 tig0016950:+6482 Msa1360160:CDS
TCTGAGGTGGTTGTGATGGC+TGG 0.368338 tig0016950:+6597 Msa1360160:CDS
GACGGAGCACGGGGCGGCGG+AGG 0.372667 tig0016950:-6336 None:intergenic
GGTGGCGGTGGAGGAGGCGG+AGG 0.373798 tig0016950:-6450 None:intergenic
AGATCTTTGGAGTGCAAGTA+TGG 0.374680 tig0016950:+15826 Msa1360160:CDS
AGTAGGGTTGTAGGAGTATC+AGG 0.374874 tig0016950:-16398 None:intergenic
CGCTGAAATCGTTAAATTAA+GGG 0.377951 tig0016950:+13892 Msa1360160:CDS
CAAAGCCAAAGTTGCCGAAC+AGG 0.385210 tig0016950:+16092 Msa1360160:CDS
GCATGAGAAGAAGGTAGAAT+TGG 0.386261 tig0016950:+13754 Msa1360160:CDS
GGCGACGGAGCACGGGGCGG+CGG 0.387639 tig0016950:-6339 None:intergenic
TGGGGTGGTGGGATACTCTA+AGG 0.390465 tig0016950:+6653 Msa1360160:CDS
ATCCTTCTGCAACCTCTTCA+AGG 0.396106 tig0016950:+15519 Msa1360160:CDS
CCACCGCCGGTGATTTCATC+TGG 0.401935 tig0016950:+6477 Msa1360160:CDS
CGCCGGTGATTTCATCTGGT+TGG 0.405754 tig0016950:+6481 Msa1360160:CDS
TCCTCAGTTGTTCTACTAAG+AGG 0.406306 tig0016950:-15610 None:intergenic
ATCACCGGCGGTGGAGGTGG+TGG 0.408299 tig0016950:-6468 None:intergenic
ACGCTCCTGTTCGGCAACTT+TGG 0.408625 tig0016950:-16097 None:intergenic
GAAGTCAGAGTATGCGTTCA+AGG 0.414553 tig0016950:+15777 Msa1360160:CDS
TCAGATGTAGGGTTATTTGA+TGG 0.416093 tig0016950:-15442 None:intergenic
TTCAAGAAACAGTAAAGATC+TGG 0.421580 tig0016950:+6704 Msa1360160:CDS
CCATTCACCTCCATTGCAGT+AGG 0.421855 tig0016950:-16415 None:intergenic
TATACTTGGACTTCTGGTAC+TGG 0.430143 tig0016950:+6408 Msa1360160:CDS
ATCGGAGGTGGTGGTGGCGG+CGG 0.436722 tig0016950:-6366 None:intergenic
AACTCATTGAGCTTGTTAAA+GGG 0.437246 tig0016950:+13933 Msa1360160:CDS
TATTTGATGGTATGGTATTG+AGG 0.437293 tig0016950:-15429 None:intergenic
CTCATCGGAGGTGGTGGTGG+CGG 0.441856 tig0016950:-6369 None:intergenic
GCCTATGAATTTCAGATGTA+GGG 0.442368 tig0016950:-15453 None:intergenic
ACCCTACATCTGAAATTCAT+AGG 0.445628 tig0016950:+15452 Msa1360160:CDS
GGACTCATCGGAGGTGGTGG+TGG 0.448295 tig0016950:-6372 None:intergenic
TGTAGGGTTATTTGATGGTA+TGG 0.450510 tig0016950:-15437 None:intergenic
TACTCCATGTCGGAACGATC+TGG 0.451657 tig0016950:+15853 Msa1360160:CDS
ACCGGCGGTGGAGGTGGTGG+CGG 0.452405 tig0016950:-6465 None:intergenic
GGCGGCGGAGGTGGAAGAAT+GGG 0.453324 tig0016950:-6324 None:intergenic
TTCAGCGGATGTACTATCAA+TGG 0.454069 tig0016950:-13876 None:intergenic
TGGCTCTGAGGTGGTTGTGA+TGG 0.455742 tig0016950:+6593 Msa1360160:CDS
TGCCTATGAATTTCAGATGT+AGG 0.455749 tig0016950:-15454 None:intergenic
GGGCGGCGGAGGTGGAAGAA+TGG 0.457397 tig0016950:-6325 None:intergenic
CTCCATTGCAGTAGGGTTGT+AGG 0.457572 tig0016950:-16407 None:intergenic
TCAAGTTTCATGATATTACT+AGG 0.458255 tig0016950:-16373 None:intergenic
TCTACCGATCATAAGGCAAA+AGG 0.462092 tig0016950:-16180 None:intergenic
CAGAAGCTGTGAACTTTCCT+AGG 0.468264 tig0016950:+16551 Msa1360160:three_prime_UTR
CTTCACATCACGCTCCTGTT+CGG 0.472977 tig0016950:-16106 None:intergenic
ATTGCAATCTACCGATCATA+AGG 0.474198 tig0016950:-16187 None:intergenic
GGTGGCGGCGGCATTGGCGA+CGG 0.474914 tig0016950:-6354 None:intergenic
GAAGCACATAGTTCAGCAAC+TGG 0.477790 tig0016950:+15402 Msa1360160:CDS
GAAATCACCGGCGGTGGAGG+TGG 0.480985 tig0016950:-6471 None:intergenic
GACCGTGACGAAGGAGGTGG+TGG 0.484218 tig0016950:-6534 None:intergenic
GTGGGATACTCTAAGGAGTC+AGG 0.486521 tig0016950:+6660 Msa1360160:CDS
TTAGCTCGCTTCTCCACGAC+AGG 0.487341 tig0016950:-15898 None:intergenic
TAACAAGCTCAATGAGTTGA+GGG 0.487699 tig0016950:-13928 None:intergenic
TGAAGAGGTTGCAGAAGGAT+TGG 0.490204 tig0016950:-15516 None:intergenic
AAAGATGGAGCATGAGAAGA+AGG 0.491152 tig0016950:+13745 Msa1360160:CDS
GAAATTAGAATCACAAATGA+TGG 0.492400 tig0016950:+13841 Msa1360160:CDS
TAAGGAAGTTAGAGATGAGA+AGG 0.492702 tig0016950:+13777 Msa1360160:CDS
AGAAGAAGGTAGAATTGGTA+AGG 0.495311 tig0016950:+13759 Msa1360160:CDS
TAGGCAATCAACACTTCAGC+TGG 0.495649 tig0016950:+15471 Msa1360160:CDS
CATTCACCTCCATTGCAGTA+GGG 0.498363 tig0016950:-16414 None:intergenic
AGAGAAGATCAAGCATGAAA+AGG 0.498964 tig0016950:+15951 Msa1360160:CDS
GGTCGGCGACGGAGGAAGAG+TGG 0.499206 tig0016950:+6553 Msa1360160:CDS
GAATGCTAAAACAATAAAGA+TGG 0.499919 tig0016950:+13730 Msa1360160:intron
TGTGAAGAGAATATTACCTT+AGG 0.501697 tig0016950:+16122 Msa1360160:CDS
CAAGTATAAGAACTCAAACT+AGG 0.505251 tig0016950:-6393 None:intergenic
TTCGTCACGGTCGGCGACGG+AGG 0.509366 tig0016950:+6545 Msa1360160:CDS
GATGAAATCACCGGCGGTGG+AGG 0.510962 tig0016950:-6474 None:intergenic
CCTCAGTTGTTCTACTAAGA+GGG 0.511516 tig0016950:-15609 None:intergenic
GCAACCTCTTCAAGGCCCAC+AGG 0.513509 tig0016950:+15527 Msa1360160:CDS
GTATGGCAACTCCGGCGAGT+GGG 0.516126 tig0016950:+6634 Msa1360160:CDS
CTAGGACTCATCGGAGGTGG+TGG 0.522370 tig0016950:-6375 None:intergenic
ACAATCTATCCATGAAGCAT+TGG 0.525949 tig0016950:-16335 None:intergenic
GGTTGTGATGGCTGGTGGTG+CGG 0.526368 tig0016950:+6605 Msa1360160:CDS
CCAGATGAAATCACCGGCGG+TGG 0.526486 tig0016950:-6477 None:intergenic
ACTCAGTGAGGAATAACAAA+AGG 0.526995 tig0016950:-16456 None:intergenic
CGTGACGAAGGAGGTGGTGG+AGG 0.529404 tig0016950:-6531 None:intergenic
CGTGGAGAAGCGAGCTAAGG+TGG 0.529785 tig0016950:+15903 Msa1360160:CDS
TCCTTCGTCACGGTCGGCGA+CGG 0.530141 tig0016950:+6542 Msa1360160:CDS
GTTGTGGCTCAGGTGGAAGA+TGG 0.530578 tig0016950:-6302 None:intergenic
AGAAAAGGCAAAGAAAGAAG+TGG 0.531914 tig0016950:+13817 Msa1360160:CDS
AATCCCTCAGTGGTTGGCTA+AGG 0.534625 tig0016950:+15560 Msa1360160:CDS
AGGAAGTGAACTTGCAATGG+TGG 0.536931 tig0016950:+6680 Msa1360160:CDS
TATGGCAACTCCGGCGAGTG+GGG 0.538150 tig0016950:+6635 Msa1360160:CDS
ACCGCCACCACCTCCACCGC+CGG 0.541730 tig0016950:+6464 Msa1360160:CDS
GGCAACTCCGGCGAGTGGGG+TGG 0.545451 tig0016950:+6638 Msa1360160:CDS
GTTCAAGGAGTTCGAGAAGA+AGG 0.549473 tig0016950:+15792 Msa1360160:CDS
TATCCCACCACCCCACTCGC+CGG 0.555600 tig0016950:-6645 None:intergenic
AGTATGGCAACTCCGGCGAG+TGG 0.559483 tig0016950:+6633 Msa1360160:CDS
CCTACTGCAATGGAGGTGAA+TGG 0.559874 tig0016950:+16415 Msa1360160:three_prime_UTR
ACATTGAATAACTTGCAAAT+GGG 0.560318 tig0016950:+15997 Msa1360160:CDS
CTACCGATCATAAGGCAAAA+GGG 0.560655 tig0016950:-16179 None:intergenic
TGATTATGTGAAGACAGAAA+AGG 0.563772 tig0016950:+13802 Msa1360160:CDS
GAACTCAAACTAGGACTCAT+CGG 0.567558 tig0016950:-6384 None:intergenic
ATGAAGCATTGGCACGGACA+TGG 0.568673 tig0016950:-16324 None:intergenic
GCCGACCGTGACGAAGGAGG+TGG 0.568937 tig0016950:-6537 None:intergenic
GGTTTCGGCTAAATTGGTAA+AGG 0.569697 tig0016950:-15588 None:intergenic
CTCCTACAACCCTACTGCAA+TGG 0.569858 tig0016950:+16405 Msa1360160:three_prime_UTR
TTAACAAGCTCAATGAGTTG+AGG 0.570089 tig0016950:-13929 None:intergenic
AAGGAAGTTAGAGATGAGAA+GGG 0.570552 tig0016950:+13778 Msa1360160:CDS
GAGGTGGTTGTGATGGCTGG+TGG 0.571563 tig0016950:+6600 Msa1360160:CDS
TGCGATTGTAGTTCAACAGA+CGG 0.572167 tig0016950:+15735 Msa1360160:CDS
TGTGGGTGTTGAGTCATTGT+CGG 0.573362 tig0016950:-16233 None:intergenic
GGTAGATTGCAATGTAGCAC+TGG 0.574386 tig0016950:+16197 Msa1360160:three_prime_UTR
AGAATGGGTTGTGGCTCAGG+TGG 0.576840 tig0016950:-6309 None:intergenic
CTGTGAACTTTCCTAGGCGT+GGG 0.577027 tig0016950:+16557 Msa1360160:three_prime_UTR
GGTGGAGGTTGCTGCATGAA+AGG 0.577342 tig0016950:-6516 None:intergenic
TACTACCACTGGCTCTGAGG+TGG 0.577905 tig0016950:+6584 Msa1360160:CDS
GGCCTTGAAGAGGTTGCAGA+AGG 0.580739 tig0016950:-15521 None:intergenic
CTACAACCCTACTGCAATGG+AGG 0.581879 tig0016950:+16408 Msa1360160:three_prime_UTR
CCTTAATTTAACGATTTCAG+CGG 0.583461 tig0016950:-13891 None:intergenic
ATATTGAATCCCTCAGTGGT+TGG 0.583645 tig0016950:+15554 Msa1360160:CDS
CTGGTATATGCTCAACGGCA+AGG 0.584813 tig0016950:-15666 None:intergenic
GCTGTGAACTTTCCTAGGCG+TGG 0.585934 tig0016950:+16556 Msa1360160:three_prime_UTR
AAAACGTTACATGAAACAGT+TGG 0.586207 tig0016950:+6164 Msa1360160:CDS
GATCGTTCCGACATGGAGTA+CGG 0.586607 tig0016950:-15850 None:intergenic
AAAAGGCAGTGAGTGTTACA+AGG 0.586835 tig0016950:+15968 Msa1360160:CDS
GTCGGCGACGGAGGAAGAGT+GGG 0.588130 tig0016950:+6554 Msa1360160:CDS
TCCGTCGCCGACCGTGACGA+AGG 0.588310 tig0016950:-6543 None:intergenic
GTGGCTCAGGTGGAAGATGG+TGG 0.588457 tig0016950:-6299 None:intergenic
GGCATTGGCGACGGAGCACG+GGG 0.588617 tig0016950:-6345 None:intergenic
GAGCCTTAGCCAACCACTGA+GGG 0.589727 tig0016950:-15563 None:intergenic
ATTGGCGACGGAGCACGGGG+CGG 0.592956 tig0016950:-6342 None:intergenic
AGTCCCTGTGGGCCTTGAAG+AGG 0.594322 tig0016950:-15531 None:intergenic
AAACTAGGACTCATCGGAGG+TGG 0.594612 tig0016950:-6378 None:intergenic
GGCGGCGAGTATGGCAACTC+CGG 0.595451 tig0016950:+6626 Msa1360160:CDS
TGTGATGGCTGGTGGTGCGG+CGG 0.601290 tig0016950:+6608 Msa1360160:CDS
TCCCAACCAGATGAAATCAC+CGG 0.602342 tig0016950:-6483 None:intergenic
CCAGACAAAGTAGCATCTGA+AGG 0.606651 tig0016950:+15685 Msa1360160:CDS
CTCCACCACCTCCTTCGTCA+CGG 0.607674 tig0016950:+6532 Msa1360160:CDS
ACCACCTCCTTCGTCACGGT+CGG 0.608123 tig0016950:+6536 Msa1360160:CDS
TGTCGTGGAGAAGCGAGCTA+AGG 0.609115 tig0016950:+15900 Msa1360160:CDS
TATTCACCCTCTGCGAACAA+TGG 0.609504 tig0016950:+15641 Msa1360160:CDS
GTCAGGAAGTGAACTTGCAA+TGG 0.609741 tig0016950:+6677 Msa1360160:CDS
TACTACTACCACTGGCTCTG+AGG 0.610685 tig0016950:+6581 Msa1360160:CDS
TTTAATGTAAACTACATGTG+TGG 0.611852 tig0016950:-16251 None:intergenic
GGTGGAAGCTTTCAGAGCAA+AGG 0.612220 tig0016950:+15921 Msa1360160:CDS
TGGGAAGCTACTACTACCAC+TGG 0.612359 tig0016950:+6573 Msa1360160:CDS
AGAACCAGATCGTTCCGACA+TGG 0.612832 tig0016950:-15857 None:intergenic
GTCGCCGACCGTGACGAAGG+AGG 0.617094 tig0016950:-6540 None:intergenic
AAGGTGCCATTGTTCGCAGA+GGG 0.617481 tig0016950:-15647 None:intergenic
GCTGCAACGTTCCCACGCCT+AGG 0.621616 tig0016950:-16568 None:intergenic
CACAACCACCTCAGAGCCAG+TGG 0.624285 tig0016950:-6589 None:intergenic
CAAGGAGTTCGAGAAGAAGG+TGG 0.624953 tig0016950:+15795 Msa1360160:CDS
CAACCTCTTCAAGGCCCACA+GGG 0.625842 tig0016950:+15528 Msa1360160:CDS
GTCATACATTCCGTGAAACG+CGG 0.629113 tig0016950:+16477 Msa1360160:three_prime_UTR
TTACCTTAGGAAAATTGACA+TGG 0.630359 tig0016950:+16135 Msa1360160:exon
TTATTTCTAAATGCATGCAG+TGG 0.631776 tig0016950:+16525 Msa1360160:three_prime_UTR
TTGGCAGGTTGATGTGCATG+TGG 0.634595 tig0016950:+15350 Msa1360160:intron
GGAGGTGGAAGAATGGGTTG+TGG 0.635584 tig0016950:-6318 None:intergenic
TTAATGTAAACTACATGTGT+GGG 0.637311 tig0016950:-16250 None:intergenic
GGATTCAATATAGTCCCTGT+GGG 0.637488 tig0016950:-15542 None:intergenic
ATGGACACAACACTCACACA+TGG 0.638692 tig0016950:-16305 None:intergenic
CAAGGTGCCATTGTTCGCAG+AGG 0.639669 tig0016950:-15648 None:intergenic
CAACACTCACACATGGACAC+CGG 0.639706 tig0016950:-16298 None:intergenic
AAGAACGAAGGACCCTGTCG+TGG 0.642509 tig0016950:+15885 Msa1360160:CDS
GGGATTCAATATAGTCCCTG+TGG 0.644115 tig0016950:-15543 None:intergenic
AAGATGGTGGTTAAGATGAG+TGG 0.644159 tig0016950:-6286 None:intergenic
TTTGTCTGGTATATGCTCAA+CGG 0.655425 tig0016950:-15671 None:intergenic
TGGAGCTTGAAGTACAGCAA+TGG 0.657391 tig0016950:+15491 Msa1360160:CDS
CCCTCTTAGTAGAACAACTG+AGG 0.665771 tig0016950:+15609 Msa1360160:CDS
CTATCCATGAAGCATTGGCA+CGG 0.672447 tig0016950:-16330 None:intergenic
TGGTTCTGTGAGAAGAACGA+AGG 0.676496 tig0016950:+15873 Msa1360160:CDS
GACTATATTGAATCCCTCAG+TGG 0.688023 tig0016950:+15550 Msa1360160:CDS
TAGCTCGCTTCTCCACGACA+GGG 0.695149 tig0016950:-15897 None:intergenic
TGAGCCTTAGCCAACCACTG+AGG 0.698511 tig0016950:-15564 None:intergenic
ACGGAATGTATGACTCAGTG+AGG 0.698840 tig0016950:-16468 None:intergenic
GTATGGTCCGTACTCCATGT+CGG 0.723585 tig0016950:+15843 Msa1360160:CDS
CTCAAACTAGGACTCATCGG+AGG 0.735263 tig0016950:-6381 None:intergenic
CAACCAGATGAAATCACCGG+CGG 0.739217 tig0016950:-6480 None:intergenic
GATTGTAGTTCAACAGACGG+AGG 0.775056 tig0016950:+15738 Msa1360160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTATTTTAAAGAGAAA+TGG - tig0016950:7222-7241 None:intergenic 10.0%
!! ATTGTTTAATTATATAACTT+TGG + tig0016950:10697-10716 Msa1360160:intron 10.0%
!!! TATATTATTTTAAAGAGAAA+TGG - tig0016950:7222-7241 None:intergenic 10.0%
!!! CATAGTATTTATTATTTTTT+TGG + tig0016950:14035-14054 Msa1360160:intron 10.0%
!! ATAAAATAACAAAACAAATT+TGG - tig0016950:15290-15309 None:intergenic 10.0%
!!! TAATACCATATTAATTTGAA+CGG - tig0016950:7091-7110 None:intergenic 15.0%
!! AAAAAAATTGAAGTAATTCT+TGG - tig0016950:9275-9294 None:intergenic 15.0%
!!! CTTCAATTTTTTTTTTGTTT+AGG + tig0016950:9282-9301 Msa1360160:intron 15.0%
!! AAGTTAGATAATTATTTGAA+TGG - tig0016950:9507-9526 None:intergenic 15.0%
!!! ATTTGGATTTTTGAAAAAAA+AGG - tig0016950:9802-9821 None:intergenic 15.0%
!! TTTAAAAATTAAGAACTAGT+GGG - tig0016950:10113-10132 None:intergenic 15.0%
!!! TTTTAAAAATTAAGAACTAG+TGG - tig0016950:10114-10133 None:intergenic 15.0%
!!! ACTAGTTCTTAATTTTTAAA+AGG + tig0016950:10113-10132 Msa1360160:intron 15.0%
!!! CTAGTTCTTAATTTTTAAAA+GGG + tig0016950:10114-10133 Msa1360160:intron 15.0%
!! TCATATAAATTAGAATTTAG+AGG - tig0016950:10641-10660 None:intergenic 15.0%
!! ACAAAACATAAAAAATTGTT+TGG - tig0016950:11165-11184 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+CGG - tig0016950:7091-7110 None:intergenic 15.0%
!! TAAAATTTCAAATCTCAAAT+AGG - tig0016950:12773-12792 None:intergenic 15.0%
!!! TATTTGAGATTTGAAATTTT+AGG + tig0016950:12772-12791 Msa1360160:intron 15.0%
!! CAAATTACAATAAACAAAAA+AGG - tig0016950:12848-12867 None:intergenic 15.0%
!!! TTTTTGTATTTGAATTTTGA+AGG + tig0016950:12912-12931 Msa1360160:intron 15.0%
!! AAAAGAAAAAAGAGAAATAA+AGG + tig0016950:13435-13454 Msa1360160:intron 15.0%
!! TAATGAATCTAATAACAAAA+AGG - tig0016950:13647-13666 None:intergenic 15.0%
!!! ATAAAAAATATTGTTTTCGT+AGG + tig0016950:15079-15098 Msa1360160:intron 15.0%
!! GAAATTCAAATTTAACAGTT+TGG - tig0016950:6809-6828 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG + tig0016950:7105-7124 Msa1360160:intron 20.0%
!!! ATTATTTTAAAGAGAAATGG+TGG - tig0016950:7219-7238 None:intergenic 20.0%
!! TTCGATAATATATGATTCTT+CGG - tig0016950:7294-7313 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG + tig0016950:7294-7313 Msa1360160:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - tig0016950:7802-7821 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG - tig0016950:7803-7822 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG + tig0016950:7802-7821 Msa1360160:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG + tig0016950:7803-7822 Msa1360160:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - tig0016950:7898-7917 None:intergenic 20.0%
!! TTGTATATTAGCAAATCTTA+TGG - tig0016950:7984-8003 None:intergenic 20.0%
!!! TAAGATTTGCTAATATACAA+AGG + tig0016950:7984-8003 Msa1360160:intron 20.0%
!! ATTAAGAATCGTTATTACAA+TGG - tig0016950:8639-8658 None:intergenic 20.0%
!! AGTAACATATTGTACTTAAA+TGG - tig0016950:8920-8939 None:intergenic 20.0%
!! TTAAAAAGCTATATCCTTAA+TGG - tig0016950:9933-9952 None:intergenic 20.0%
!!! ATTAAGGATATAGCTTTTTA+AGG + tig0016950:9932-9951 Msa1360160:intron 20.0%
!! TTAAAAATTAAGAACTAGTG+GGG - tig0016950:10112-10131 None:intergenic 20.0%
!!! TTGTCTTATTTTTTGAACTT+GGG - tig0016950:10392-10411 None:intergenic 20.0%
!!! ATTTTAAAACTTGAGTAACT+TGG - tig0016950:10731-10750 None:intergenic 20.0%
!! TATGCAATAAGGAAAATAAA+TGG - tig0016950:10977-10996 None:intergenic 20.0%
!! AAACTTGTAAATATGCAATA+AGG - tig0016950:10988-11007 None:intergenic 20.0%
!! TTATTGCATATTTACAAGTT+TGG + tig0016950:10987-11006 Msa1360160:intron 20.0%
!! ATTTATCCTTGATGTATTTA+GGG + tig0016950:11436-11455 Msa1360160:intron 20.0%
!! GAAATTCAAATTTAACAGTT+TGG - tig0016950:6809-6828 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG + tig0016950:7105-7124 Msa1360160:intron 20.0%
!!! ATTATTTTAAAGAGAAATGG+TGG - tig0016950:7219-7238 None:intergenic 20.0%
!! TTCGATAATATATGATTCTT+CGG - tig0016950:7294-7313 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG + tig0016950:7294-7313 Msa1360160:intron 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - tig0016950:7802-7821 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG - tig0016950:7803-7822 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG + tig0016950:7802-7821 Msa1360160:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG + tig0016950:7803-7822 Msa1360160:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - tig0016950:7898-7917 None:intergenic 20.0%
!! AATTCTCAAATTAACAACTA+AGG - tig0016950:13304-13323 None:intergenic 20.0%
!!! AATTACTAATGATTTGGATT+TGG - tig0016950:13359-13378 None:intergenic 20.0%
!!! TAACTTCGATGATATTTTTT+TGG + tig0016950:13697-13716 Msa1360160:intron 20.0%
!!! TTTTTAACAAGGAAAAGTTA+AGG - tig0016950:14180-14199 None:intergenic 20.0%
!!! ACAAGATCATTTTTTTAACA+AGG - tig0016950:14191-14210 None:intergenic 20.0%
!! ATTATTGTGTAACAATAGAT+GGG + tig0016950:14747-14766 Msa1360160:intron 20.0%
!!! TATACTTTTTCCATTACTTT+GGG + tig0016950:14836-14855 Msa1360160:intron 20.0%
!!! TAATTTTAAATCTTTGACAC+AGG - tig0016950:14939-14958 None:intergenic 20.0%
!! AAGTGACAATAATTTAATTC+CGG - tig0016950:14995-15014 None:intergenic 20.0%
!!! TTCTCATGTTTTGTTGTTTT+TGG + tig0016950:6779-6798 Msa1360160:intron 25.0%
! GAAGAATCATATATTATCGA+AGG + tig0016950:7293-7312 Msa1360160:intron 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + tig0016950:7396-7415 Msa1360160:intron 25.0%
! GTTTCTTAATTGGATATATC+CGG + tig0016950:7574-7593 Msa1360160:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG + tig0016950:7804-7823 Msa1360160:intron 25.0%
! AATTGGAAAGAAAAACACTA+TGG - tig0016950:7881-7900 None:intergenic 25.0%
!! TTTAGAATACACCTATGAAA+AGG - tig0016950:8113-8132 None:intergenic 25.0%
! TTAGAGTCATATTCTTCTTA+AGG + tig0016950:8955-8974 Msa1360160:intron 25.0%
! AATATGTGATTGCAAGTTTA+TGG + tig0016950:9164-9183 Msa1360160:intron 25.0%
!! CTGAAAATTTTTGCAATTCA+TGG - tig0016950:9549-9568 None:intergenic 25.0%
!! CATGAATTGCAAAAATTTTC+AGG + tig0016950:9547-9566 Msa1360160:intron 25.0%
!! ATGTGAAAGTTGTCTTTTTA+TGG - tig0016950:9604-9623 None:intergenic 25.0%
! AGAAACAATAAACGATGAAA+TGG - tig0016950:9894-9913 None:intergenic 25.0%
!!! TATAGCTTTTTAAGGCTTAA+TGG + tig0016950:9940-9959 Msa1360160:intron 25.0%
! TATGAACTTGGTTTATACAA+TGG - tig0016950:9974-9993 None:intergenic 25.0%
! TAAAAATTAAGAACTAGTGG+GGG - tig0016950:10111-10130 None:intergenic 25.0%
! CTATGATCACTTTAACATTT+AGG + tig0016950:10251-10270 Msa1360160:intron 25.0%
! CGATAAATAACGAAACATAT+AGG - tig0016950:10285-10304 None:intergenic 25.0%
!!! CTTGTCTTATTTTTTGAACT+TGG - tig0016950:10393-10412 None:intergenic 25.0%
! GTTCAAAAAATAAGACAAGT+TGG + tig0016950:10394-10413 Msa1360160:intron 25.0%
! ACATAAAAAATTGTTTGGAG+CGG - tig0016950:11160-11179 None:intergenic 25.0%
! TGTAACAAACTATACTTGTT+TGG + tig0016950:11182-11201 Msa1360160:intron 25.0%
! GATTTATCCTTGATGTATTT+AGG + tig0016950:11435-11454 Msa1360160:intron 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG + tig0016950:11509-11528 Msa1360160:intron 25.0%
! GAAGAATCATATATTATCGA+AGG + tig0016950:7293-7312 Msa1360160:intron 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + tig0016950:7396-7415 Msa1360160:intron 25.0%
! GTTTCTTAATTGGATATATC+CGG + tig0016950:7574-7593 Msa1360160:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG + tig0016950:7804-7823 Msa1360160:intron 25.0%
! AATTGGAAAGAAAAACACTA+TGG - tig0016950:7881-7900 None:intergenic 25.0%
!! TACATGCATGTCATAAATTT+TGG + tig0016950:12726-12745 Msa1360160:intron 25.0%
!! TTTTTGTTGAGTGTTAATGA+AGG + tig0016950:12812-12831 Msa1360160:intron 25.0%
! TCACACAATTACTAATGATT+TGG - tig0016950:13365-13384 None:intergenic 25.0%
! TTATCAAATCAACCTTAGTT+TGG - tig0016950:13607-13626 None:intergenic 25.0%
! CGAAGTTAAGCAATTATTAA+TGG - tig0016950:13685-13704 None:intergenic 25.0%
!!! TTCGATGATATTTTTTTGGT+TGG + tig0016950:13701-13720 Msa1360160:intron 25.0%
! GAATGCTAAAACAATAAAGA+TGG + tig0016950:13730-13749 Msa1360160:intron 25.0%
! GAAATTAGAATCACAAATGA+TGG + tig0016950:13841-13860 Msa1360160:CDS 25.0%
!! AAAATGATCTTGTTAACTTG+CGG + tig0016950:14198-14217 Msa1360160:intron 25.0%
! TCGTTATTGTGTAATATGTT+AGG - tig0016950:14224-14243 None:intergenic 25.0%
!! TTTTATACTGTTACTATGCT+AGG - tig0016950:14487-14506 None:intergenic 25.0%
!! AACTACTTTATAGTTTTTGC+TGG + tig0016950:14522-14541 Msa1360160:intron 25.0%
! CATTATTGTGTAACAATAGA+TGG + tig0016950:14746-14765 Msa1360160:intron 25.0%
!!! CTATACTTTTTCCATTACTT+TGG + tig0016950:14835-14854 Msa1360160:intron 25.0%
! TAGAGACAATTTGAATAAAG+TGG + tig0016950:14887-14906 Msa1360160:intron 25.0%
!! AAATATTGTTTTCGTAGGAT+CGG + tig0016950:15084-15103 Msa1360160:intron 25.0%
!! ACAAAAAACACTGTTTTCTT+AGG + tig0016950:15141-15160 Msa1360160:intron 25.0%
! ACTATCAGTTTATACATCAA+TGG - tig0016950:15191-15210 None:intergenic 25.0%
!!! TCTTTATTTTCTCACTTTAG+AGG + tig0016950:15262-15281 Msa1360160:intron 25.0%
!! ACATTGAATAACTTGCAAAT+GGG + tig0016950:15997-16016 Msa1360160:CDS 25.0%
! TTAATGTAAACTACATGTGT+GGG - tig0016950:16253-16272 None:intergenic 25.0%
! TTTAATGTAAACTACATGTG+TGG - tig0016950:16254-16273 None:intergenic 25.0%
!! TCACATTTTCAAATGATTAC+CGG + tig0016950:16279-16298 Msa1360160:three_prime_UTR 25.0%
! TCAAGTTTCATGATATTACT+AGG - tig0016950:16376-16395 None:intergenic 25.0%
AAAACGTTACATGAAACAGT+TGG + tig0016950:6164-6183 Msa1360160:CDS 30.0%
CAAGTATAAGAACTCAAACT+AGG - tig0016950:6396-6415 None:intergenic 30.0%
! CTAGTTTGAGTTCTTATACT+TGG + tig0016950:6394-6413 Msa1360160:CDS 30.0%
TTCAAGAAACAGTAAAGATC+TGG + tig0016950:6704-6723 Msa1360160:CDS 30.0%
AGATCTGGTTGAAGTTATTA+AGG + tig0016950:6719-6738 Msa1360160:intron 30.0%
AGAATTACACCCTCAAAATA+TGG + tig0016950:7011-7030 Msa1360160:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG + tig0016950:7083-7102 Msa1360160:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG - tig0016950:7161-7180 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG + tig0016950:7166-7185 Msa1360160:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG - tig0016950:7498-7517 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG + tig0016950:7515-7534 Msa1360160:intron 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG + tig0016950:7564-7583 Msa1360160:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG - tig0016950:7833-7852 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG - tig0016950:7834-7853 None:intergenic 30.0%
TATGGAAAAAACTAGTGTGT+GGG - tig0016950:7863-7882 None:intergenic 30.0%
!!! AAACCATTTTGAAGTCAAGT+GGG - tig0016950:7939-7958 None:intergenic 30.0%
ATCTATACTCTATGTTGAGT+GGG - tig0016950:8278-8297 None:intergenic 30.0%
! TTAGAGAGTGTATCTCTAAA+TGG - tig0016950:8581-8600 None:intergenic 30.0%
TAAAATAAACTCCTGAGGAA+TGG - tig0016950:9482-9501 None:intergenic 30.0%
AATTCATGGACAAGAAAACA+AGG - tig0016950:9535-9554 None:intergenic 30.0%
ACTAGAAGAACAAGTCTATA+TGG - tig0016950:9578-9597 None:intergenic 30.0%
GAGTACTATCGAGTTATAAA+TGG + tig0016950:9631-9650 Msa1360160:intron 30.0%
TACTATCGAGTTATAAATGG+CGG + tig0016950:9634-9653 Msa1360160:intron 30.0%
AAAAAGGAACTAAAACCTGA+TGG - tig0016950:9786-9805 None:intergenic 30.0%
AAAATCCAAATACAACCGAT+TGG + tig0016950:9811-9830 Msa1360160:intron 30.0%
! ATTGCTAAAGAGTATGAACT+TGG - tig0016950:9986-10005 None:intergenic 30.0%
CTTTAACTAAAGAATAGTGG+GGG - tig0016950:10193-10212 None:intergenic 30.0%
CCTTTAACTAAAGAATAGTG+GGG - tig0016950:10194-10213 None:intergenic 30.0%
CCCTTTAACTAAAGAATAGT+GGG - tig0016950:10195-10214 None:intergenic 30.0%
CCCACTATTCTTTAGTTAAA+GGG + tig0016950:10192-10211 Msa1360160:intron 30.0%
CCACTATTCTTTAGTTAAAG+GGG + tig0016950:10193-10212 Msa1360160:intron 30.0%
CCTATGAATATGTATTCATC+AGG - tig0016950:10312-10331 None:intergenic 30.0%
CCTGATGAATACATATTCAT+AGG + tig0016950:10309-10328 Msa1360160:intron 30.0%
! AGAATTTTTGTCTTCAGACT+TGG + tig0016950:10446-10465 Msa1360160:intron 30.0%
! GAATTTTTGTCTTCAGACTT+GGG + tig0016950:10447-10466 Msa1360160:intron 30.0%
! TTATTGATGACTGTGAACTT+TGG - tig0016950:10537-10556 None:intergenic 30.0%
CACACAACTAATAACATAGA+AGG + tig0016950:10797-10816 Msa1360160:intron 30.0%
TGAAAAAGATTGCACTTTGA+TGG - tig0016950:10844-10863 None:intergenic 30.0%
AAAACATTGATATCACGTAC+TGG - tig0016950:11068-11087 None:intergenic 30.0%
ACCTCAATATGTAACTTCTT+CGG + tig0016950:11467-11486 Msa1360160:intron 30.0%
AGAATTACACCCTCAAAATA+TGG + tig0016950:7011-7030 Msa1360160:intron 30.0%
CGAAACCGTTCAAATTAATA+TGG + tig0016950:7083-7102 Msa1360160:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG - tig0016950:7161-7180 None:intergenic 30.0%
ACTTCTCCAAAACATGAATA+TGG + tig0016950:7166-7185 Msa1360160:intron 30.0%
TTACAAACTCTCCCTATAAA+AGG - tig0016950:7498-7517 None:intergenic 30.0%
TAACAAAAAACGAGTGACTT+GGG + tig0016950:7515-7534 Msa1360160:intron 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG + tig0016950:7564-7583 Msa1360160:intron 30.0%
TAAAAATGTCCCACATTGAA+GGG - tig0016950:7833-7852 None:intergenic 30.0%
TTAAAAATGTCCCACATTGA+AGG - tig0016950:7834-7853 None:intergenic 30.0%
TATGGAAAAAACTAGTGTGT+GGG - tig0016950:7863-7882 None:intergenic 30.0%
GTAACAGATATGAAACATGT+TGG - tig0016950:12659-12678 None:intergenic 30.0%
!! GTGTTGTTTAAGATTCAAGT+TGG + tig0016950:12872-12891 Msa1360160:intron 30.0%
TGTGATGTAATTGTACTTGA+TGG + tig0016950:12936-12955 Msa1360160:intron 30.0%
TTTCTACAAAATCCTACTTG+AGG + tig0016950:13390-13409 Msa1360160:intron 30.0%
TTCTACAAAATCCTACTTGA+GGG + tig0016950:13391-13410 Msa1360160:intron 30.0%
GAATTATATTACCCTCAAGT+AGG - tig0016950:13405-13424 None:intergenic 30.0%
AGAGAAATAAAGGTTGAAGA+AGG + tig0016950:13445-13464 Msa1360160:intron 30.0%
!! AAGAAGGTTTTGTCTTTTGT+GGG + tig0016950:13461-13480 Msa1360160:intron 30.0%
TGGAGACTTCAAAAAAATGA+GGG - tig0016950:13587-13606 None:intergenic 30.0%
TTGGAGACTTCAAAAAAATG+AGG - tig0016950:13588-13607 None:intergenic 30.0%
!!! TTTTTGAAGTCTCCAAACTA+AGG + tig0016950:13592-13611 Msa1360160:intron 30.0%
TGATTATGTGAAGACAGAAA+AGG + tig0016950:13802-13821 Msa1360160:CDS 30.0%
CCTTAATTTAACGATTTCAG+CGG - tig0016950:13894-13913 None:intergenic 30.0%
CGCTGAAATCGTTAAATTAA+GGG + tig0016950:13892-13911 Msa1360160:CDS 30.0%
!! AACTCATTGAGCTTGTTAAA+GGG + tig0016950:13933-13952 Msa1360160:CDS 30.0%
TTGTTCAAAAAACGAGATTC+TGG - tig0016950:14631-14650 None:intergenic 30.0%
ATCACCAAGAACAAGAAAAA+GGG - tig0016950:14676-14695 None:intergenic 30.0%
AATCACCAAGAACAAGAAAA+AGG - tig0016950:14677-14696 None:intergenic 30.0%
AAGTGCATTGGGAAAATATA+TGG - tig0016950:14715-14734 None:intergenic 30.0%
! TTTCCCAATGCACTTTTATA+TGG + tig0016950:14720-14739 Msa1360160:intron 30.0%
! CATCCATATAAAAGTGCATT+GGG - tig0016950:14726-14745 None:intergenic 30.0%
! GTAATGGAAAAAGTATAGCA+TGG - tig0016950:14833-14852 None:intergenic 30.0%
! CATTTTACTGAATGATTCTC+CGG + tig0016950:14973-14992 Msa1360160:intron 30.0%
! AAACACTGTTTTCTTAGGAT+CGG + tig0016950:15146-15165 Msa1360160:intron 30.0%
! TATTTGATGGTATGGTATTG+AGG - tig0016950:15432-15451 None:intergenic 30.0%
!! AGGAATAAAAAGCTTGTTGA+CGG + tig0016950:15705-15724 Msa1360160:CDS 30.0%
! GACATTGAATAACTTGCAAA+TGG + tig0016950:15996-16015 Msa1360160:CDS 30.0%
!!! AAGTTTTTCAAGGGATTGTA+GGG + tig0016950:16028-16047 Msa1360160:CDS 30.0%
TGTGAAGAGAATATTACCTT+AGG + tig0016950:16122-16141 Msa1360160:CDS 30.0%
TTACCTTAGGAAAATTGACA+TGG + tig0016950:16135-16154 Msa1360160:exon 30.0%
!! TTATTTCTAAATGCATGCAG+TGG + tig0016950:16525-16544 Msa1360160:three_prime_UTR 30.0%
AGTTCTTATACTTGGACTTC+TGG + tig0016950:6402-6421 Msa1360160:CDS 35.0%
CTTCGGTAGATGATAGAATT+TGG - tig0016950:6831-6850 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG - tig0016950:6848-6867 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG - tig0016950:6965-6984 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG - tig0016950:7023-7042 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG - tig0016950:7024-7043 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG - tig0016950:7158-7177 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG - tig0016950:7175-7194 None:intergenic 35.0%
GACTATGAACTTAAGACCAA+GGG + tig0016950:7316-7335 Msa1360160:intron 35.0%
AAGAACACTCTTAATACCGA+AGG + tig0016950:7350-7369 Msa1360160:intron 35.0%
AGAACACTCTTAATACCGAA+GGG + tig0016950:7351-7370 Msa1360160:intron 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + tig0016950:7399-7418 Msa1360160:intron 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + tig0016950:7400-7419 Msa1360160:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + tig0016950:7445-7464 Msa1360160:intron 35.0%
! TTTCGGTGCAAAGAATCAAA+TGG + tig0016950:7462-7481 Msa1360160:intron 35.0%
! TTCGGTGCAAAGAATCAAAT+GGG + tig0016950:7463-7482 Msa1360160:intron 35.0%
GTAACAAAAAACGAGTGACT+TGG + tig0016950:7514-7533 Msa1360160:intron 35.0%
AACAAAAAACGAGTGACTTG+GGG + tig0016950:7516-7535 Msa1360160:intron 35.0%
AAACAAAACGCGTTTGCTTA+AGG - tig0016950:7558-7577 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG - tig0016950:7596-7615 None:intergenic 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG + tig0016950:7596-7615 Msa1360160:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG + tig0016950:7601-7620 Msa1360160:intron 35.0%
CTATGGAAAAAACTAGTGTG+TGG - tig0016950:7864-7883 None:intergenic 35.0%
!!! AACCATTTTGAAGTCAAGTG+GGG - tig0016950:7938-7957 None:intergenic 35.0%
!!! GAAACCATTTTGAAGTCAAG+TGG - tig0016950:7940-7959 None:intergenic 35.0%
!! TATGCAAAGGTTCAAGTTGT+TGG - tig0016950:8015-8034 None:intergenic 35.0%
TCTATACTCTATGTTGAGTG+GGG - tig0016950:8277-8296 None:intergenic 35.0%
GATCTATACTCTATGTTGAG+TGG - tig0016950:8279-8298 None:intergenic 35.0%
GGTAAAAACAAGTCATGAAG+TGG - tig0016950:8383-8402 None:intergenic 35.0%
! TACCCATTGAACCTATTTCT+TGG + tig0016950:8399-8418 Msa1360160:intron 35.0%
! ACCCATTGAACCTATTTCTT+GGG + tig0016950:8400-8419 Msa1360160:intron 35.0%
TCCCAAGAAATAGGTTCAAT+GGG - tig0016950:8404-8423 None:intergenic 35.0%
ATCCCAAGAAATAGGTTCAA+TGG - tig0016950:8405-8424 None:intergenic 35.0%
CTATTAAGTCCTTTCGTCAA+AGG + tig0016950:8509-8528 Msa1360160:intron 35.0%
AATTCATTGTGATAGTACCG+CGG - tig0016950:8673-8692 None:intergenic 35.0%
TCACAATGAATTAACACAGC+AGG + tig0016950:8681-8700 Msa1360160:intron 35.0%
TGAATTAACACAGCAGGTAA+CGG + tig0016950:8687-8706 Msa1360160:intron 35.0%
AAACTAGTGAAGAAGCAAGT+TGG - tig0016950:8752-8771 None:intergenic 35.0%
ATCTCAGATTCATTCCATAG+TGG + tig0016950:8786-8805 Msa1360160:intron 35.0%
!! GACTCTAAGATTACTTCACT+AGG - tig0016950:8943-8962 None:intergenic 35.0%
ATGCTATAGAAAGAGTCATG+AGG - tig0016950:8983-9002 None:intergenic 35.0%
TCATGACTCTTTCTATAGCA+TGG + tig0016950:8982-9001 Msa1360160:intron 35.0%
TGTGCAAGTTTACTAGTAGA+CGG - tig0016950:9021-9040 None:intergenic 35.0%
ACAGAATATACGAGCATCAT+TGG - tig0016950:9104-9123 None:intergenic 35.0%
AAGTGTAAGAACACTTGAGA+TGG - tig0016950:9137-9156 None:intergenic 35.0%
ATCTCAAGTGTTCTTACACT+TGG + tig0016950:9136-9155 Msa1360160:intron 35.0%
! AATTTTTCATGCCATTCCTC+AGG + tig0016950:9468-9487 Msa1360160:intron 35.0%
! TGGTCTAAAATAAACTCCTG+AGG - tig0016950:9487-9506 None:intergenic 35.0%
AGACAACTTTCACATCCATT+TGG + tig0016950:9609-9628 Msa1360160:intron 35.0%
TAACTCGATAGTACTCCAAA+TGG - tig0016950:9627-9646 None:intergenic 35.0%
AGTTATAAATGGCGGCTAAA+GGG + tig0016950:9642-9661 Msa1360160:intron 35.0%
! TAAAGGGACTAGTACTCTTA+TGG + tig0016950:9658-9677 Msa1360160:intron 35.0%
! ATGGATATGATTTTCGTGAC+TGG + tig0016950:9677-9696 Msa1360160:intron 35.0%
! GTCTAAAACCTTTGACTACA+AGG + tig0016950:9736-9755 Msa1360160:intron 35.0%
CAAAACCAATCGGTTGTATT+TGG - tig0016950:9819-9838 None:intergenic 35.0%
CTCATAGTTGCAAAACCAAT+CGG - tig0016950:9829-9848 None:intergenic 35.0%
! CCTTAATGGATGCTGAATTA+TGG - tig0016950:9919-9938 None:intergenic 35.0%
CCATAATTCAGCATCCATTA+AGG + tig0016950:9916-9935 Msa1360160:intron 35.0%
CCCCACTATTCTTTAGTTAA+AGG + tig0016950:10191-10210 Msa1360160:intron 35.0%
CCCCTTTAACTAAAGAATAG+TGG - tig0016950:10196-10215 None:intergenic 35.0%
TCTGGACTATATTTAGATCC+TGG - tig0016950:10365-10384 None:intergenic 35.0%
! TTTTTGAACTTGGGATTGTC+TGG - tig0016950:10383-10402 None:intergenic 35.0%
!! ATCTTTTTCACAAGAGTGCA+TGG + tig0016950:10854-10873 Msa1360160:intron 35.0%
GCGGAAAATAAGATAATGCA+AGG - tig0016950:11141-11160 None:intergenic 35.0%
AGTTGTCCCTAAATACATCA+AGG - tig0016950:11445-11464 None:intergenic 35.0%
ACCGAAGAAGTTACATATTG+AGG - tig0016950:11471-11490 None:intergenic 35.0%
CTTCGGTAGATGATAGAATT+TGG - tig0016950:6831-6850 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG - tig0016950:6848-6867 None:intergenic 35.0%
TTAATCGAACAGTTGTAGCT+GGG - tig0016950:6965-6984 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG - tig0016950:7023-7042 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG - tig0016950:7024-7043 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG - tig0016950:7158-7177 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG - tig0016950:7175-7194 None:intergenic 35.0%
GACTATGAACTTAAGACCAA+GGG + tig0016950:7316-7335 Msa1360160:intron 35.0%
AAGAACACTCTTAATACCGA+AGG + tig0016950:7350-7369 Msa1360160:intron 35.0%
AGAACACTCTTAATACCGAA+GGG + tig0016950:7351-7370 Msa1360160:intron 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + tig0016950:7399-7418 Msa1360160:intron 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + tig0016950:7400-7419 Msa1360160:intron 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + tig0016950:7445-7464 Msa1360160:intron 35.0%
! TTTCGGTGCAAAGAATCAAA+TGG + tig0016950:7462-7481 Msa1360160:intron 35.0%
! TTCGGTGCAAAGAATCAAAT+GGG + tig0016950:7463-7482 Msa1360160:intron 35.0%
GTAACAAAAAACGAGTGACT+TGG + tig0016950:7514-7533 Msa1360160:intron 35.0%
AACAAAAAACGAGTGACTTG+GGG + tig0016950:7516-7535 Msa1360160:intron 35.0%
AAACAAAACGCGTTTGCTTA+AGG - tig0016950:7558-7577 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG - tig0016950:7596-7615 None:intergenic 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG + tig0016950:7596-7615 Msa1360160:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG + tig0016950:7601-7620 Msa1360160:intron 35.0%
CTATGGAAAAAACTAGTGTG+TGG - tig0016950:7864-7883 None:intergenic 35.0%
TGATCAGAAAAACCAGAACT+TGG - tig0016950:12687-12706 None:intergenic 35.0%
GATGTAATTGTACTTGATGG+TGG + tig0016950:12939-12958 Msa1360160:intron 35.0%
!! TAATTGTACTTGATGGTGGT+AGG + tig0016950:12943-12962 Msa1360160:intron 35.0%
ATGGTGGTAGGTAAAATGTA+CGG + tig0016950:12955-12974 Msa1360160:intron 35.0%
GTAGGTAAAATGTACGGAAA+TGG + tig0016950:12961-12980 Msa1360160:intron 35.0%
GTAAAATGTACGGAAATGGA+TGG + tig0016950:12965-12984 Msa1360160:intron 35.0%
GAATTTGAGTCCATCAATGT+GGG + tig0016950:12987-13006 Msa1360160:intron 35.0%
TCTTCAAGTCCTAAACTGAA+TGG + tig0016950:13018-13037 Msa1360160:intron 35.0%
! AGTCCTAAACTGAATGGATT+TGG + tig0016950:13024-13043 Msa1360160:intron 35.0%
TTGCCAAATCCATTCAGTTT+AGG - tig0016950:13030-13049 None:intergenic 35.0%
!!! AGGTTTCTGTTGGTAGTTTT+AGG + tig0016950:13061-13080 Msa1360160:intron 35.0%
!!! GGTTTCTGTTGGTAGTTTTA+GGG + tig0016950:13062-13081 Msa1360160:intron 35.0%
!!! GGTAGTTTTAGGGCTAATAA+TGG + tig0016950:13072-13091 Msa1360160:intron 35.0%
! TTTAGGGCTAATAATGGTGT+TGG + tig0016950:13078-13097 Msa1360160:intron 35.0%
! GCTAATAATGGTGTTGGAAA+TGG + tig0016950:13084-13103 Msa1360160:intron 35.0%
! AATAATGGTGTTGGAAATGG+TGG + tig0016950:13087-13106 Msa1360160:intron 35.0%
AAATTGCACAGCAACCAAAT+CGG + tig0016950:13268-13287 Msa1360160:intron 35.0%
! AAGGTCGTTTAAAACCGATT+TGG - tig0016950:13285-13304 None:intergenic 35.0%
!! GAAGAAGGTTTTGTCTTTTG+TGG + tig0016950:13460-13479 Msa1360160:intron 35.0%
CATAGTTATCCACAGAATGT+TGG - tig0016950:13532-13551 None:intergenic 35.0%
CAACATTCTGTGGATAACTA+TGG + tig0016950:13530-13549 Msa1360160:intron 35.0%
AGAAGAAGGTAGAATTGGTA+AGG + tig0016950:13759-13778 Msa1360160:CDS 35.0%
TAAGGAAGTTAGAGATGAGA+AGG + tig0016950:13777-13796 Msa1360160:CDS 35.0%
AAGGAAGTTAGAGATGAGAA+GGG + tig0016950:13778-13797 Msa1360160:CDS 35.0%
AGAAAAGGCAAAGAAAGAAG+TGG + tig0016950:13817-13836 Msa1360160:CDS 35.0%
CCGCTGAAATCGTTAAATTA+AGG + tig0016950:13891-13910 Msa1360160:CDS 35.0%
! TAACAAGCTCAATGAGTTGA+GGG - tig0016950:13931-13950 None:intergenic 35.0%
TTAACAAGCTCAATGAGTTG+AGG - tig0016950:13932-13951 None:intergenic 35.0%
!! CAACTCATTGAGCTTGTTAA+AGG + tig0016950:13932-13951 Msa1360160:CDS 35.0%
! AGCATCTCAATAAGCGTTTT+TGG + tig0016950:14107-14126 Msa1360160:intron 35.0%
ACCGTCCAATCTCAAATTAA+CGG - tig0016950:14285-14304 None:intergenic 35.0%
AGAGAATCAAGTACTAGAAC+TGG + tig0016950:14448-14467 Msa1360160:intron 35.0%
!! GTCTGTTTCTCACTTGTTTT+TGG + tig0016950:14555-14574 Msa1360160:intron 35.0%
! GCATCCATATAAAAGTGCAT+TGG - tig0016950:14727-14746 None:intergenic 35.0%
TTGTGTAACAATAGATGGGA+TGG + tig0016950:14751-14770 Msa1360160:intron 35.0%
TGTGTAACAATAGATGGGAT+GGG + tig0016950:14752-14771 Msa1360160:intron 35.0%
CGATTAAGTTCCCAAAGTAA+TGG - tig0016950:14849-14868 None:intergenic 35.0%
AATAAAGTGGTACCTTGTTG+TGG + tig0016950:14900-14919 Msa1360160:intron 35.0%
CGGAGAATCATTCAGTAAAA+TGG - tig0016950:14975-14994 None:intergenic 35.0%
! TGTAGGGTTATTTGATGGTA+TGG - tig0016950:15440-15459 None:intergenic 35.0%
TCAGATGTAGGGTTATTTGA+TGG - tig0016950:15445-15464 None:intergenic 35.0%
! ACCCTACATCTGAAATTCAT+AGG + tig0016950:15452-15471 Msa1360160:CDS 35.0%
GCCTATGAATTTCAGATGTA+GGG - tig0016950:15456-15475 None:intergenic 35.0%
TGCCTATGAATTTCAGATGT+AGG - tig0016950:15457-15476 None:intergenic 35.0%
TTGTTCTACTAAGAGGGTTT+CGG - tig0016950:15606-15625 None:intergenic 35.0%
TTTGTCTGGTATATGCTCAA+CGG - tig0016950:15674-15693 None:intergenic 35.0%
AGAGAAGATCAAGCATGAAA+AGG + tig0016950:15951-15970 Msa1360160:CDS 35.0%
!! GTTGTCCTCAAGTTTTTCAA+GGG + tig0016950:16019-16038 Msa1360160:CDS 35.0%
ACAATCCCTTGAAAAACTTG+AGG - tig0016950:16027-16046 None:intergenic 35.0%
!!! CAAGTTTTTCAAGGGATTGT+AGG + tig0016950:16027-16046 Msa1360160:CDS 35.0%
! GATCCATGTCAATTTTCCTA+AGG - tig0016950:16141-16160 None:intergenic 35.0%
ATTGCAATCTACCGATCATA+AGG - tig0016950:16190-16209 None:intergenic 35.0%
ACAATCTATCCATGAAGCAT+TGG - tig0016950:16338-16357 None:intergenic 35.0%
ACTCAGTGAGGAATAACAAA+AGG - tig0016950:16459-16478 None:intergenic 35.0%
ATTCGTTCTCTTCGTTCAAC+TGG + tig0016950:6228-6247 Msa1360160:CDS 40.0%
! AAGATGGTGGTTAAGATGAG+TGG - tig0016950:6289-6308 None:intergenic 40.0%
GAACTCAAACTAGGACTCAT+CGG - tig0016950:6387-6406 None:intergenic 40.0%
TATACTTGGACTTCTGGTAC+TGG + tig0016950:6408-6427 Msa1360160:CDS 40.0%
TTTCATCTGGTTGGGATTTC+TGG + tig0016950:6490-6509 Msa1360160:CDS 40.0%
TTCATCTGGTTGGGATTTCT+GGG + tig0016950:6491-6510 Msa1360160:CDS 40.0%
TTTCTTAAAGCTGCTGATGC+TGG + tig0016950:6756-6775 Msa1360160:intron 40.0%
CATCTACCGAAGTTGTTACT+AGG + tig0016950:6839-6858 Msa1360160:intron 40.0%
! AGTCTACCCTGCACAATTTT+GGG - tig0016950:6911-6930 None:intergenic 40.0%
! TAGTCTACCCTGCACAATTT+TGG - tig0016950:6912-6931 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - tig0016950:6966-6985 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG - tig0016950:7076-7095 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG - tig0016950:7117-7136 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG - tig0016950:7139-7158 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - tig0016950:7200-7219 None:intergenic 40.0%
GGACTATGAACTTAAGACCA+AGG + tig0016950:7315-7334 Msa1360160:intron 40.0%
AACTTAAGACCAAGGGACTA+TGG + tig0016950:7323-7342 Msa1360160:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG - tig0016950:7335-7354 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG + tig0016950:7360-7379 Msa1360160:intron 40.0%
GAGAAGAGAGGAAAAAACAC+AGG + tig0016950:7422-7441 Msa1360160:intron 40.0%
TCGGTGCAAAGAATCAAATG+GGG + tig0016950:7464-7483 Msa1360160:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG + tig0016950:7584-7603 Msa1360160:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG + tig0016950:7602-7621 Msa1360160:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG + tig0016950:7743-7762 Msa1360160:intron 40.0%
!!! ACCATTTTGAAGTCAAGTGG+GGG - tig0016950:7937-7956 None:intergenic 40.0%
CAACTTGAACCTTTGCATAG+TGG + tig0016950:8016-8035 Msa1360160:intron 40.0%
! TTGAACCTTTGCATAGTGGA+AGG + tig0016950:8020-8039 Msa1360160:intron 40.0%
GAATACCTTCCACTATGCAA+AGG - tig0016950:8028-8047 None:intergenic 40.0%
CCTATGAAAAGGTTTGTGTG+TGG - tig0016950:8102-8121 None:intergenic 40.0%
! CCACACACAAACCTTTTCAT+AGG + tig0016950:8099-8118 Msa1360160:intron 40.0%
! CTAGAGCATTCGTTAAAACC+GGG - tig0016950:8168-8187 None:intergenic 40.0%
! CCTAGAGCATTCGTTAAAAC+CGG - tig0016950:8169-8188 None:intergenic 40.0%
ATTCTGCCTCGAAATTCCAT+AGG + tig0016950:8190-8209 Msa1360160:intron 40.0%
CCTATACGAATGTGGAACTT+AGG - tig0016950:8221-8240 None:intergenic 40.0%
CCTAAGTTCCACATTCGTAT+AGG + tig0016950:8218-8237 Msa1360160:intron 40.0%
TAGACTCACCTATACGAATG+TGG - tig0016950:8229-8248 None:intergenic 40.0%
TCGTATAGGTGAGTCTATCA+AGG + tig0016950:8232-8251 Msa1360160:intron 40.0%
CGTATAGGTGAGTCTATCAA+GGG + tig0016950:8233-8252 Msa1360160:intron 40.0%
CAAGAAACATCCAGTAGGAT+GGG - tig0016950:8479-8498 None:intergenic 40.0%
AAGTCCAAGAAACATCCAGT+AGG - tig0016950:8484-8503 None:intergenic 40.0%
TTAGCTGATCCTTTGACGAA+AGG - tig0016950:8521-8540 None:intergenic 40.0%
GAGTGTATCTCTAAATGGAG+CGG - tig0016950:8576-8595 None:intergenic 40.0%
ATGGTAAGAGACGACAGATA+AGG - tig0016950:8620-8639 None:intergenic 40.0%
CTTAATCTTTGCAATAGCCG+CGG + tig0016950:8653-8672 Msa1360160:intron 40.0%
! GTAACGGTTTTTCCCATAGA+GGG + tig0016950:8703-8722 Msa1360160:intron 40.0%
!! GATATTGACTCAGTCCACTA+TGG - tig0016950:8803-8822 None:intergenic 40.0%
GCCACTGAATGTATTAGATC+CGG - tig0016950:9067-9086 None:intergenic 40.0%
GAGTTATAAATGGCGGCTAA+AGG + tig0016950:9641-9660 Msa1360160:intron 40.0%
AAGGCTTTCCTTGTAGTCAA+AGG - tig0016950:9747-9766 None:intergenic 40.0%
!! TGGTACGGTTGATGAATACA+AGG - tig0016950:9766-9785 None:intergenic 40.0%
TATTCATCAACCGTACCATC+AGG + tig0016950:9768-9787 Msa1360160:intron 40.0%
GGAACTAAAACCTGATGGTA+CGG - tig0016950:9781-9800 None:intergenic 40.0%
! TTAGCTTTCTTACCTCCTTG+AGG + tig0016950:10007-10026 Msa1360160:intron 40.0%
GATGTTATAGAACCTCAAGG+AGG - tig0016950:10022-10041 None:intergenic 40.0%
CGAGATGTTATAGAACCTCA+AGG - tig0016950:10025-10044 None:intergenic 40.0%
ACTAGTGAGTTCAACTCTCT+TGG + tig0016950:10336-10355 Msa1360160:intron 40.0%
CTAGTGAGTTCAACTCTCTT+GGG + tig0016950:10337-10356 Msa1360160:intron 40.0%
TAGTGAGTTCAACTCTCTTG+GGG + tig0016950:10338-10357 Msa1360160:intron 40.0%
CATCTACCGAAGTTGTTACT+AGG + tig0016950:6839-6858 Msa1360160:intron 40.0%
! AGTCTACCCTGCACAATTTT+GGG - tig0016950:6911-6930 None:intergenic 40.0%
! TAGTCTACCCTGCACAATTT+TGG - tig0016950:6912-6931 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - tig0016950:6966-6985 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG - tig0016950:7076-7095 None:intergenic 40.0%
GTCTCAGCACCATAATAGAA+TGG - tig0016950:7117-7136 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG - tig0016950:7139-7158 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - tig0016950:7200-7219 None:intergenic 40.0%
GGACTATGAACTTAAGACCA+AGG + tig0016950:7315-7334 Msa1360160:intron 40.0%
AACTTAAGACCAAGGGACTA+TGG + tig0016950:7323-7342 Msa1360160:intron 40.0%
TTCTTAAGACCATAGTCCCT+TGG - tig0016950:7335-7354 None:intergenic 40.0%
TTAATACCGAAGGGACAGAA+AGG + tig0016950:7360-7379 Msa1360160:intron 40.0%
GAGAAGAGAGGAAAAAACAC+AGG + tig0016950:7422-7441 Msa1360160:intron 40.0%
TCGGTGCAAAGAATCAAATG+GGG + tig0016950:7464-7483 Msa1360160:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG + tig0016950:7584-7603 Msa1360160:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG + tig0016950:7602-7621 Msa1360160:intron 40.0%
GTTCACCCGTTCACAAAATT+GGG + tig0016950:7743-7762 Msa1360160:intron 40.0%
CTGTTACAAGTTCCAAGTTC+TGG + tig0016950:12672-12691 Msa1360160:intron 40.0%
GGAATTTGAGTCCATCAATG+TGG + tig0016950:12986-13005 Msa1360160:intron 40.0%
TTTGGAGAGGCTATATGCAT+GGG + tig0016950:13122-13141 Msa1360160:intron 40.0%
GGAGAAGAAATTGTACCAAG+AGG + tig0016950:13143-13162 Msa1360160:intron 40.0%
GAAATTGTACCAAGAGGTCA+AGG + tig0016950:13149-13168 Msa1360160:intron 40.0%
!!! GTGTGCTTTTTCAAGGCATA+GGG - tig0016950:13196-13215 None:intergenic 40.0%
!!! TGTGTGCTTTTTCAAGGCAT+AGG - tig0016950:13197-13216 None:intergenic 40.0%
!!! GTCGAATGTGTGCTTTTTCA+AGG - tig0016950:13203-13222 None:intergenic 40.0%
GCTGTTCGATCTCAGTTTAA+CGG - tig0016950:13246-13265 None:intergenic 40.0%
TTGTGGGCATAAACATGATG+TGG + tig0016950:13477-13496 Msa1360160:intron 40.0%
TGTGGGCATAAACATGATGT+GGG + tig0016950:13478-13497 Msa1360160:intron 40.0%
TCTATGCAACCAACATTCTG+TGG + tig0016950:13520-13539 Msa1360160:intron 40.0%
AAAGATGGAGCATGAGAAGA+AGG + tig0016950:13745-13764 Msa1360160:CDS 40.0%
GCATGAGAAGAAGGTAGAAT+TGG + tig0016950:13754-13773 Msa1360160:CDS 40.0%
TTCAGCGGATGTACTATCAA+TGG - tig0016950:13879-13898 None:intergenic 40.0%
! TTTGGAGCCTATCTTAACCT+TGG + tig0016950:14125-14144 Msa1360160:intron 40.0%
CCAATCACCAAGGTTAAGAT+AGG - tig0016950:14135-14154 None:intergenic 40.0%
! CCTATCTTAACCTTGGTGAT+TGG + tig0016950:14132-14151 Msa1360160:intron 40.0%
AAGGAAAAGTTAAGGCGAGA+TGG - tig0016950:14172-14191 None:intergenic 40.0%
! CTGACCCGTTAATTTGAGAT+TGG + tig0016950:14277-14296 Msa1360160:intron 40.0%
CCGTCCAATCTCAAATTAAC+GGG - tig0016950:14284-14303 None:intergenic 40.0%
! CCCGTTAATTTGAGATTGGA+CGG + tig0016950:14281-14300 Msa1360160:intron 40.0%
CATGCTTCAAGACAGATTCT+TGG - tig0016950:14338-14357 None:intergenic 40.0%
CAAGAATCTGTCTTGAAGCA+TGG + tig0016950:14336-14355 Msa1360160:intron 40.0%
!! AGCATGGACTGCATTTTGTT+TGG + tig0016950:14352-14371 Msa1360160:intron 40.0%
TTGTTTGGTTGTGATCCCTT+TGG + tig0016950:14367-14386 Msa1360160:intron 40.0%
AGACAAGCAATGACTCCAAA+GGG - tig0016950:14385-14404 None:intergenic 40.0%
TAGACAAGCAATGACTCCAA+AGG - tig0016950:14386-14405 None:intergenic 40.0%
! TTTGGAGTCATTGCTTGTCT+AGG + tig0016950:14385-14404 Msa1360160:intron 40.0%
TTGGAGTCATTGCTTGTCTA+GGG + tig0016950:14386-14405 Msa1360160:intron 40.0%
CCAAGAACAAGAAAAAGGGT+TGG - tig0016950:14672-14691 None:intergenic 40.0%
! CCAACCCTTTTTCTTGTTCT+TGG + tig0016950:14669-14688 Msa1360160:intron 40.0%
CAAATTACCTGTCCACAACA+AGG - tig0016950:14915-14934 None:intergenic 40.0%
TCATCCATGAATAATCCAGC+AGG - tig0016950:15059-15078 None:intergenic 40.0%
! GCATTTTGAGCTTCTTGTGT+TGG + tig0016950:15331-15350 Msa1360160:intron 40.0%
GGATTCAATATAGTCCCTGT+GGG - tig0016950:15545-15564 None:intergenic 40.0%
GACTATATTGAATCCCTCAG+TGG + tig0016950:15550-15569 Msa1360160:CDS 40.0%
ATATTGAATCCCTCAGTGGT+TGG + tig0016950:15554-15573 Msa1360160:CDS 40.0%
GGTTTCGGCTAAATTGGTAA+AGG - tig0016950:15591-15610 None:intergenic 40.0%
TAAGAGGGTTTCGGCTAAAT+TGG - tig0016950:15597-15616 None:intergenic 40.0%
CCTCAGTTGTTCTACTAAGA+GGG - tig0016950:15612-15631 None:intergenic 40.0%
TCCTCAGTTGTTCTACTAAG+AGG - tig0016950:15613-15632 None:intergenic 40.0%
TGCGATTGTAGTTCAACAGA+CGG + tig0016950:15735-15754 Msa1360160:CDS 40.0%
!! AGATCTTTGGAGTGCAAGTA+TGG + tig0016950:15826-15845 Msa1360160:CDS 40.0%
AAAAGGCAGTGAGTGTTACA+AGG + tig0016950:15968-15987 Msa1360160:CDS 40.0%
! GGTTGTCCTCAAGTTTTTCA+AGG + tig0016950:16018-16037 Msa1360160:CDS 40.0%
! TCACCCTTTTGCCTTATGAT+CGG + tig0016950:16176-16195 Msa1360160:three_prime_UTR 40.0%
CTACCGATCATAAGGCAAAA+GGG - tig0016950:16182-16201 None:intergenic 40.0%
TCTACCGATCATAAGGCAAA+AGG - tig0016950:16183-16202 None:intergenic 40.0%
TCCCAACCAGATGAAATCAC+CGG - tig0016950:6486-6505 None:intergenic 45.0%
GTCAGGAAGTGAACTTGCAA+TGG + tig0016950:6677-6696 Msa1360160:CDS 45.0%
AGGAAGTGAACTTGCAATGG+TGG + tig0016950:6680-6699 Msa1360160:CDS 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + tig0016950:6880-6899 Msa1360160:intron 45.0%
GCACTACCCAAAATTGTGCA+GGG + tig0016950:6902-6921 Msa1360160:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - tig0016950:6950-6969 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + tig0016950:7043-7062 Msa1360160:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG + tig0016950:7127-7146 Msa1360160:intron 45.0%
GCACTACGACCACTCAAATA+TGG + tig0016950:7188-7207 Msa1360160:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - tig0016950:7369-7388 None:intergenic 45.0%
! GATATGCTTTTGGATCGGGT+CGG + tig0016950:7606-7625 Msa1360160:intron 45.0%
! ATATGCTTTTGGATCGGGTC+GGG + tig0016950:7607-7626 Msa1360160:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + tig0016950:7644-7663 Msa1360160:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG + tig0016950:7742-7761 Msa1360160:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG - tig0016950:7751-7770 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG - tig0016950:7752-7771 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG + tig0016950:7753-7772 Msa1360160:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG + tig0016950:7754-7773 Msa1360160:intron 45.0%
ATGGGAAAAGTGACCTCCAA+GGG - tig0016950:7784-7803 None:intergenic 45.0%
TATGGGAAAAGTGACCTCCA+AGG - tig0016950:7785-7804 None:intergenic 45.0%
TCCCCCACTTGACTTCAAAA+TGG + tig0016950:7933-7952 Msa1360160:intron 45.0%
! CTAAAAGCCCGTGCGTTTTA+AGG + tig0016950:8128-8147 Msa1360160:intron 45.0%
!! CCGGTTTTAACGAATGCTCT+AGG + tig0016950:8166-8185 Msa1360160:intron 45.0%
TACGAATGTGGAACTTAGGC+CGG - tig0016950:8217-8236 None:intergenic 45.0%
GACTGGAGATCCCAAGAAAT+AGG - tig0016950:8413-8432 None:intergenic 45.0%
! TACCATCACTTGTGGGCTAT+AGG + tig0016950:8446-8465 Msa1360160:intron 45.0%
CCAAGAAACATCCAGTAGGA+TGG - tig0016950:8480-8499 None:intergenic 45.0%
CCATCCTACTGGATGTTTCT+TGG + tig0016950:8477-8496 Msa1360160:intron 45.0%
!! GGTAACGGTTTTTCCCATAG+AGG + tig0016950:8702-8721 Msa1360160:intron 45.0%
TGCACATTGAGCATCACTAG+AGG - tig0016950:8846-8865 None:intergenic 45.0%
TTTCACGACATCGACAATGC+CGG + tig0016950:9045-9064 Msa1360160:intron 45.0%
GCCGGATCTAATACATTCAG+TGG + tig0016950:9063-9082 Msa1360160:intron 45.0%
GAGCATCATTGGCATCACTT+AGG - tig0016950:9093-9112 None:intergenic 45.0%
! AATGGGAGCACGACATTAGT+GGG - tig0016950:10154-10173 None:intergenic 45.0%
! TAATGGGAGCACGACATTAG+TGG - tig0016950:10155-10174 None:intergenic 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + tig0016950:6880-6899 Msa1360160:intron 45.0%
GCACTACCCAAAATTGTGCA+GGG + tig0016950:6902-6921 Msa1360160:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - tig0016950:6950-6969 None:intergenic 45.0%
TTGATCGAAGCCACTCGATA+CGG + tig0016950:7043-7062 Msa1360160:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG + tig0016950:7127-7146 Msa1360160:intron 45.0%
GCACTACGACCACTCAAATA+TGG + tig0016950:7188-7207 Msa1360160:intron 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - tig0016950:7369-7388 None:intergenic 45.0%
! GATATGCTTTTGGATCGGGT+CGG + tig0016950:7606-7625 Msa1360160:intron 45.0%
! ATATGCTTTTGGATCGGGTC+GGG + tig0016950:7607-7626 Msa1360160:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + tig0016950:7644-7663 Msa1360160:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG + tig0016950:7742-7761 Msa1360160:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG - tig0016950:7751-7770 None:intergenic 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG - tig0016950:7752-7771 None:intergenic 45.0%
TCACAAAATTGGGTACCCCA+AGG + tig0016950:7753-7772 Msa1360160:intron 45.0%
CACAAAATTGGGTACCCCAA+GGG + tig0016950:7754-7773 Msa1360160:intron 45.0%
ATGGGAAAAGTGACCTCCAA+GGG - tig0016950:7784-7803 None:intergenic 45.0%
TATGGGAAAAGTGACCTCCA+AGG - tig0016950:7785-7804 None:intergenic 45.0%
ATTTGGCAAGCTGTCTCAAG+AGG + tig0016950:13041-13060 Msa1360160:intron 45.0%
CTGTCTCAAGAGGTTTCTGT+TGG + tig0016950:13051-13070 Msa1360160:intron 45.0%
! TGGTGGACATTGCTCTACTT+TGG + tig0016950:13104-13123 Msa1360160:intron 45.0%
! GACATTGCTCTACTTTGGAG+AGG + tig0016950:13109-13128 Msa1360160:intron 45.0%
! CTTTGGAGAGGCTATATGCA+TGG + tig0016950:13121-13140 Msa1360160:intron 45.0%
CATTCGACGAAAAGCAATCC+CGG + tig0016950:13215-13234 Msa1360160:intron 45.0%
TTCGATCTCAGTTTAACGGC+CGG - tig0016950:13242-13261 None:intergenic 45.0%
ACATGATGTGGGTCTAGTGA+AGG + tig0016950:13489-13508 Msa1360160:intron 45.0%
TGGAGTCATTGCTTGTCTAG+GGG + tig0016950:14387-14406 Msa1360160:intron 45.0%
GTTACGAGGTTCATGCATGA+TGG + tig0016950:14777-14796 Msa1360160:intron 45.0%
TCTGCCTGCTGGATTATTCA+TGG + tig0016950:15052-15071 Msa1360160:intron 45.0%
! TTTGAGCTTCTTGTGTTGGC+AGG + tig0016950:15335-15354 Msa1360160:intron 45.0%
GAAGCACATAGTTCAGCAAC+TGG + tig0016950:15402-15421 Msa1360160:CDS 45.0%
TAGGCAATCAACACTTCAGC+TGG + tig0016950:15471-15490 Msa1360160:CDS 45.0%
TGGAGCTTGAAGTACAGCAA+TGG + tig0016950:15491-15510 Msa1360160:CDS 45.0%
TGAAGAGGTTGCAGAAGGAT+TGG - tig0016950:15519-15538 None:intergenic 45.0%
ATCCTTCTGCAACCTCTTCA+AGG + tig0016950:15519-15538 Msa1360160:CDS 45.0%
GGGATTCAATATAGTCCCTG+TGG - tig0016950:15546-15565 None:intergenic 45.0%
CCCTCTTAGTAGAACAACTG+AGG + tig0016950:15609-15628 Msa1360160:CDS 45.0%
TATTCACCCTCTGCGAACAA+TGG + tig0016950:15641-15660 Msa1360160:CDS 45.0%
!! CCTTCAGATGCTACTTTGTC+TGG - tig0016950:15688-15707 None:intergenic 45.0%
CCAGACAAAGTAGCATCTGA+AGG + tig0016950:15685-15704 Msa1360160:CDS 45.0%
GATTGTAGTTCAACAGACGG+AGG + tig0016950:15738-15757 Msa1360160:CDS 45.0%
GAAGTCAGAGTATGCGTTCA+AGG + tig0016950:15777-15796 Msa1360160:CDS 45.0%
GTTCAAGGAGTTCGAGAAGA+AGG + tig0016950:15792-15811 Msa1360160:CDS 45.0%
GGTGGTTCAGCTTAGATCTT+TGG + tig0016950:15813-15832 Msa1360160:CDS 45.0%
! TGGTTCTGTGAGAAGAACGA+AGG + tig0016950:15873-15892 Msa1360160:CDS 45.0%
!!! AGGGTTTTCAAGTGTGTGCA+TGG + tig0016950:16047-16066 Msa1360160:CDS 45.0%
!!! GTTTTCAAGTGTGTGCATGG+AGG + tig0016950:16050-16069 Msa1360160:CDS 45.0%
GGTAGATTGCAATGTAGCAC+TGG + tig0016950:16197-16216 Msa1360160:three_prime_UTR 45.0%
!! TGTGGGTGTTGAGTCATTGT+CGG - tig0016950:16236-16255 None:intergenic 45.0%
ATGGACACAACACTCACACA+TGG - tig0016950:16308-16327 None:intergenic 45.0%
!! CTATCCATGAAGCATTGGCA+CGG - tig0016950:16333-16352 None:intergenic 45.0%
!! AGTAGGGTTGTAGGAGTATC+AGG - tig0016950:16401-16420 None:intergenic 45.0%
CATTCACCTCCATTGCAGTA+GGG - tig0016950:16417-16436 None:intergenic 45.0%
ACGGAATGTATGACTCAGTG+AGG - tig0016950:16471-16490 None:intergenic 45.0%
GTCATACATTCCGTGAAACG+CGG + tig0016950:16477-16496 Msa1360160:three_prime_UTR 45.0%
CAGAAGCTGTGAACTTTCCT+AGG + tig0016950:16551-16570 Msa1360160:three_prime_UTR 45.0%
AAACTAGGACTCATCGGAGG+TGG - tig0016950:6381-6400 None:intergenic 50.0%
CTCAAACTAGGACTCATCGG+AGG - tig0016950:6384-6403 None:intergenic 50.0%
CAACCAGATGAAATCACCGG+CGG - tig0016950:6483-6502 None:intergenic 50.0%
GCCGGTGATTTCATCTGGTT+GGG + tig0016950:6482-6501 Msa1360160:CDS 50.0%
TGGGAAGCTACTACTACCAC+TGG + tig0016950:6573-6592 Msa1360160:CDS 50.0%
!! TACTACTACCACTGGCTCTG+AGG + tig0016950:6581-6600 Msa1360160:CDS 50.0%
! GTGGGATACTCTAAGGAGTC+AGG + tig0016950:6660-6679 Msa1360160:CDS 50.0%
! TACTAGGTTGAGTCACGACC+AGG + tig0016950:6855-6874 Msa1360160:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - tig0016950:6876-6895 None:intergenic 50.0%
GGCACTACCCAAAATTGTGC+AGG + tig0016950:6901-6920 Msa1360160:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - tig0016950:6944-6963 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - tig0016950:6947-6966 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG + tig0016950:7484-7503 Msa1360160:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG + tig0016950:7821-7840 Msa1360160:intron 50.0%
GAAGTCAAGTGGGGGATTGT+TGG - tig0016950:7929-7948 None:intergenic 50.0%
AAAACCGGGATACACGTGCA+GGG - tig0016950:8154-8173 None:intergenic 50.0%
TAAAACCGGGATACACGTGC+AGG - tig0016950:8155-8174 None:intergenic 50.0%
GCCTCGAAATTCCATAGGAC+CGG + tig0016950:8195-8214 Msa1360160:intron 50.0%
CATGATCCTGCAGCGAAAGA+AGG - tig0016950:8327-8346 None:intergenic 50.0%
CTTGGGATCTCCAGTCATGT+AGG + tig0016950:8417-8436 Msa1360160:intron 50.0%
GGATCTCCAGTCATGTAGGT+CGG + tig0016950:8421-8440 Msa1360160:intron 50.0%
GATCTCCAGTCATGTAGGTC+GGG + tig0016950:8422-8441 Msa1360160:intron 50.0%
GTCGGGTTACCATCACTTGT+GGG + tig0016950:8439-8458 Msa1360160:intron 50.0%
TGCCTATAGCCCACAAGTGA+TGG - tig0016950:8451-8470 None:intergenic 50.0%
AGGCATTAGTCCCATCCTAC+TGG + tig0016950:8466-8485 Msa1360160:intron 50.0%
GCTAGCTGAGATCCCTCTAT+GGG - tig0016950:8718-8737 None:intergenic 50.0%
TGCTAGCTGAGATCCCTCTA+TGG - tig0016950:8719-8738 None:intergenic 50.0%
TAGAGGGATCTCAGCTAGCA+AGG + tig0016950:8719-8738 Msa1360160:intron 50.0%
! ATGGGAGCACGACATTAGTG+GGG - tig0016950:10153-10172 None:intergenic 50.0%
!! AGAATAGTGGGGGCACTAGT+GGG - tig0016950:10183-10202 None:intergenic 50.0%
!! AAGAATAGTGGGGGCACTAG+TGG - tig0016950:10184-10203 None:intergenic 50.0%
! TACTAGGTTGAGTCACGACC+AGG + tig0016950:6855-6874 Msa1360160:intron 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - tig0016950:6876-6895 None:intergenic 50.0%
GGCACTACCCAAAATTGTGC+AGG + tig0016950:6901-6920 Msa1360160:intron 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - tig0016950:6944-6963 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - tig0016950:6947-6966 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG + tig0016950:7484-7503 Msa1360160:intron 50.0%
TTGGGGTGACCCTTCAATGT+GGG + tig0016950:7821-7840 Msa1360160:intron 50.0%
TGAGTCCATCAATGTGGGCT+TGG + tig0016950:12992-13011 Msa1360160:intron 50.0%
GAGTCCATCAATGTGGGCTT+GGG + tig0016950:12993-13012 Msa1360160:intron 50.0%
AGTCCATCAATGTGGGCTTG+GGG + tig0016950:12994-13013 Msa1360160:intron 50.0%
AGCTACTCACCTTGACCTCT+TGG - tig0016950:13161-13180 None:intergenic 50.0%
TCGATCTCAGTTTAACGGCC+GGG - tig0016950:13241-13260 None:intergenic 50.0%
AGTTAAGGCGAGATGGCTCT+CGG - tig0016950:14165-14184 None:intergenic 50.0%
TCATTGCTTGTCTAGGGGAG+TGG + tig0016950:14392-14411 Msa1360160:intron 50.0%
AGATGGGATGGGATGTTACG+AGG + tig0016950:14763-14782 Msa1360160:intron 50.0%
! AGTGGTACCTTGTTGTGGAC+AGG + tig0016950:14905-14924 Msa1360160:intron 50.0%
CTAGCACAATTTCTGCCTGC+TGG + tig0016950:15041-15060 Msa1360160:intron 50.0%
!! TTGGCAGGTTGATGTGCATG+TGG + tig0016950:15350-15369 Msa1360160:intron 50.0%
! AATCCCTCAGTGGTTGGCTA+AGG + tig0016950:15560-15579 Msa1360160:CDS 50.0%
!! AAGGTGCCATTGTTCGCAGA+GGG - tig0016950:15650-15669 None:intergenic 50.0%
CTGGTATATGCTCAACGGCA+AGG - tig0016950:15669-15688 None:intergenic 50.0%
CAAGGAGTTCGAGAAGAAGG+TGG + tig0016950:15795-15814 Msa1360160:CDS 50.0%
GTATGGTCCGTACTCCATGT+CGG + tig0016950:15843-15862 Msa1360160:CDS 50.0%
GATCGTTCCGACATGGAGTA+CGG - tig0016950:15853-15872 None:intergenic 50.0%
TACTCCATGTCGGAACGATC+TGG + tig0016950:15853-15872 Msa1360160:CDS 50.0%
AGAACCAGATCGTTCCGACA+TGG - tig0016950:15860-15879 None:intergenic 50.0%
GGTGGAAGCTTTCAGAGCAA+AGG + tig0016950:15921-15940 Msa1360160:CDS 50.0%
CAAAGCCAAAGTTGCCGAAC+AGG + tig0016950:16092-16111 Msa1360160:CDS 50.0%
CTTCACATCACGCTCCTGTT+CGG - tig0016950:16109-16128 None:intergenic 50.0%
CAACACTCACACATGGACAC+CGG - tig0016950:16301-16320 None:intergenic 50.0%
!! ATGAAGCATTGGCACGGACA+TGG - tig0016950:16327-16346 None:intergenic 50.0%
ATGTCCGTGCCAATGCTTCA+TGG + tig0016950:16326-16345 Msa1360160:three_prime_UTR 50.0%
CTCCTACAACCCTACTGCAA+TGG + tig0016950:16405-16424 Msa1360160:three_prime_UTR 50.0%
CTCCATTGCAGTAGGGTTGT+AGG - tig0016950:16410-16429 None:intergenic 50.0%
CTACAACCCTACTGCAATGG+AGG + tig0016950:16408-16427 Msa1360160:three_prime_UTR 50.0%
CCATTCACCTCCATTGCAGT+AGG - tig0016950:16418-16437 None:intergenic 50.0%
CCTACTGCAATGGAGGTGAA+TGG + tig0016950:16415-16434 Msa1360160:three_prime_UTR 50.0%
TTCCGTGAAACGCGGTAGTA+TGG + tig0016950:16485-16504 Msa1360160:three_prime_UTR 50.0%
AGCCATACTACCGCGTTTCA+CGG - tig0016950:16490-16509 None:intergenic 50.0%
CTGTGAACTTTCCTAGGCGT+GGG + tig0016950:16557-16576 Msa1360160:three_prime_UTR 50.0%
GTTGTGGCTCAGGTGGAAGA+TGG - tig0016950:6305-6324 None:intergenic 55.0%
!! AGAATGGGTTGTGGCTCAGG+TGG - tig0016950:6312-6331 None:intergenic 55.0%
!! GGAAGAATGGGTTGTGGCTC+AGG - tig0016950:6315-6334 None:intergenic 55.0%
!! GGAGGTGGAAGAATGGGTTG+TGG - tig0016950:6321-6340 None:intergenic 55.0%
CGCCGGTGATTTCATCTGGT+TGG + tig0016950:6481-6500 Msa1360160:CDS 55.0%
GGTGGAGGTTGCTGCATGAA+AGG - tig0016950:6519-6538 None:intergenic 55.0%
!! TACTACCACTGGCTCTGAGG+TGG + tig0016950:6584-6603 Msa1360160:CDS 55.0%
!! TGGCTCTGAGGTGGTTGTGA+TGG + tig0016950:6593-6612 Msa1360160:CDS 55.0%
! TCTGAGGTGGTTGTGATGGC+TGG + tig0016950:6597-6616 Msa1360160:CDS 55.0%
!! TGGGGTGGTGGGATACTCTA+AGG + tig0016950:6653-6672 Msa1360160:CDS 55.0%
CGGTTACGTACCGTATCGAG+TGG - tig0016950:7056-7075 None:intergenic 55.0%
ACAAGTCGGAGGGAGAAGAG+AGG + tig0016950:7410-7429 Msa1360160:intron 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG + tig0016950:7483-7502 Msa1360160:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG + tig0016950:7820-7839 Msa1360160:intron 55.0%
TGCAGGGCCTTAAAACGCAC+GGG - tig0016950:8138-8157 None:intergenic 55.0%
GTGCAGGGCCTTAAAACGCA+CGG - tig0016950:8139-8158 None:intergenic 55.0%
GCCGGTCCTATGGAATTTCG+AGG - tig0016950:8199-8218 None:intergenic 55.0%
TGGAACTTAGGCCGGTCCTA+TGG - tig0016950:8209-8228 None:intergenic 55.0%
TGAGTGGGGTACACAGCTAC+AGG - tig0016950:8263-8282 None:intergenic 55.0%
CCTGCAGCGAAAGAAGGATG+AGG - tig0016950:8321-8340 None:intergenic 55.0%
CCTCATCCTTCTTTCGCTGC+AGG + tig0016950:8318-8337 Msa1360160:intron 55.0%
GGTAACCCGACCTACATGAC+TGG - tig0016950:8430-8449 None:intergenic 55.0%
GGTCGGGTTACCATCACTTG+TGG + tig0016950:8438-8457 Msa1360160:intron 55.0%
! TGGGAGCACGACATTAGTGG+GGG - tig0016950:10152-10171 None:intergenic 55.0%
! GCACTAGTGGGGGCTCTAAT+GGG - tig0016950:10171-10190 None:intergenic 55.0%
!! AATAGTGGGGGCACTAGTGG+GGG - tig0016950:10181-10200 None:intergenic 55.0%
!! GAATAGTGGGGGCACTAGTG+GGG - tig0016950:10182-10201 None:intergenic 55.0%
GTTCAACTCTCTTGGGGTCC+AGG + tig0016950:10344-10363 Msa1360160:intron 55.0%
CGGTTACGTACCGTATCGAG+TGG - tig0016950:7056-7075 None:intergenic 55.0%
ACAAGTCGGAGGGAGAAGAG+AGG + tig0016950:7410-7429 Msa1360160:intron 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG + tig0016950:7483-7502 Msa1360160:intron 55.0%
GTTGGGGTGACCCTTCAATG+TGG + tig0016950:7820-7839 Msa1360160:intron 55.0%
GAACCCCAAGCCCACATTGA+TGG - tig0016950:13000-13019 None:intergenic 55.0%
GGCCTTGAAGAGGTTGCAGA+AGG - tig0016950:15524-15543 None:intergenic 55.0%
CAACCTCTTCAAGGCCCACA+GGG + tig0016950:15528-15547 Msa1360160:CDS 55.0%
GAGCCTTAGCCAACCACTGA+GGG - tig0016950:15566-15585 None:intergenic 55.0%
TGAGCCTTAGCCAACCACTG+AGG - tig0016950:15567-15586 None:intergenic 55.0%
!! CAAGGTGCCATTGTTCGCAG+AGG - tig0016950:15651-15670 None:intergenic 55.0%
AAGAACGAAGGACCCTGTCG+TGG + tig0016950:15885-15904 Msa1360160:CDS 55.0%
TAGCTCGCTTCTCCACGACA+GGG - tig0016950:15900-15919 None:intergenic 55.0%
TTAGCTCGCTTCTCCACGAC+AGG - tig0016950:15901-15920 None:intergenic 55.0%
TGTCGTGGAGAAGCGAGCTA+AGG + tig0016950:15900-15919 Msa1360160:CDS 55.0%
ACGCTCCTGTTCGGCAACTT+TGG - tig0016950:16100-16119 None:intergenic 55.0%
GCTGTGAACTTTCCTAGGCG+TGG + tig0016950:16556-16575 Msa1360160:three_prime_UTR 55.0%
GTGGCTCAGGTGGAAGATGG+TGG - tig0016950:6302-6321 None:intergenic 60.0%
CTAGGACTCATCGGAGGTGG+TGG - tig0016950:6378-6397 None:intergenic 60.0%
GATGAAATCACCGGCGGTGG+AGG - tig0016950:6477-6496 None:intergenic 60.0%
CCAGATGAAATCACCGGCGG+TGG - tig0016950:6480-6499 None:intergenic 60.0%
CCACCGCCGGTGATTTCATC+TGG + tig0016950:6477-6496 Msa1360160:CDS 60.0%
CTCCACCACCTCCTTCGTCA+CGG + tig0016950:6532-6551 Msa1360160:CDS 60.0%
ACCACCTCCTTCGTCACGGT+CGG + tig0016950:6536-6555 Msa1360160:CDS 60.0%
CACAACCACCTCAGAGCCAG+TGG - tig0016950:6592-6611 None:intergenic 60.0%
GAGGTGGTTGTGATGGCTGG+TGG + tig0016950:6600-6619 Msa1360160:CDS 60.0%
! GGTTGTGATGGCTGGTGGTG+CGG + tig0016950:6605-6624 Msa1360160:CDS 60.0%
AGTATGGCAACTCCGGCGAG+TGG + tig0016950:6633-6652 Msa1360160:CDS 60.0%
GTATGGCAACTCCGGCGAGT+GGG + tig0016950:6634-6653 Msa1360160:CDS 60.0%
TATGGCAACTCCGGCGAGTG+GGG + tig0016950:6635-6654 Msa1360160:CDS 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - tig0016950:6939-6958 None:intergenic 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG - tig0016950:7772-7791 None:intergenic 60.0%
AAGGCCCTGCACGTGTATCC+CGG + tig0016950:8147-8166 Msa1360160:intron 60.0%
! GGCACTAGTGGGGGCTCTAA+TGG - tig0016950:10172-10191 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - tig0016950:6939-6958 None:intergenic 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG - tig0016950:7772-7791 None:intergenic 60.0%
GACGAAAAGCAATCCCGGCC+CGG + tig0016950:13220-13239 Msa1360160:intron 60.0%
TCTCAGTTTAACGGCCGGGC+CGG - tig0016950:13237-13256 None:intergenic 60.0%
CGGAGGCTCACCAATCACCA+AGG - tig0016950:14145-14164 None:intergenic 60.0%
TAAGGCGAGATGGCTCTCGG+AGG - tig0016950:14162-14181 None:intergenic 60.0%
GCAACCTCTTCAAGGCCCAC+AGG + tig0016950:15527-15546 Msa1360160:CDS 60.0%
AGTCCCTGTGGGCCTTGAAG+AGG - tig0016950:15534-15553 None:intergenic 60.0%
CGTGGAGAAGCGAGCTAAGG+TGG + tig0016950:15903-15922 Msa1360160:CDS 60.0%
GGCGGCGGAGGTGGAAGAAT+GGG - tig0016950:6327-6346 None:intergenic 65.0%
!! CTCATCGGAGGTGGTGGTGG+CGG - tig0016950:6372-6391 None:intergenic 65.0%
! GGACTCATCGGAGGTGGTGG+TGG - tig0016950:6375-6394 None:intergenic 65.0%
GAAATCACCGGCGGTGGAGG+TGG - tig0016950:6474-6493 None:intergenic 65.0%
! CGTGACGAAGGAGGTGGTGG+AGG - tig0016950:6534-6553 None:intergenic 65.0%
GACCGTGACGAAGGAGGTGG+TGG - tig0016950:6537-6556 None:intergenic 65.0%
TCCTTCGTCACGGTCGGCGA+CGG + tig0016950:6542-6561 Msa1360160:CDS 65.0%
GTCGGCGACGGAGGAAGAGT+GGG + tig0016950:6554-6573 Msa1360160:CDS 65.0%
! TGTGATGGCTGGTGGTGCGG+CGG + tig0016950:6608-6627 Msa1360160:CDS 65.0%
GGCGGCGAGTATGGCAACTC+CGG + tig0016950:6626-6645 Msa1360160:CDS 65.0%
TATCCCACCACCCCACTCGC+CGG - tig0016950:6648-6667 None:intergenic 65.0%
CTATCAACCACGCCGCCTCC+AGG + tig0016950:6929-6948 Msa1360160:intron 65.0%
! GTACCCCAAGGGCACACCCT+TGG + tig0016950:7765-7784 Msa1360160:intron 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG - tig0016950:7771-7790 None:intergenic 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - tig0016950:7773-7792 None:intergenic 65.0%
CTATCAACCACGCCGCCTCC+AGG + tig0016950:6929-6948 Msa1360160:intron 65.0%
! GTACCCCAAGGGCACACCCT+TGG + tig0016950:7765-7784 Msa1360160:intron 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG - tig0016950:7771-7790 None:intergenic 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - tig0016950:7773-7792 None:intergenic 65.0%
CTCAGTTTAACGGCCGGGCC+GGG - tig0016950:13236-13255 None:intergenic 65.0%
GGGCGGCGGAGGTGGAAGAA+TGG - tig0016950:6328-6347 None:intergenic 70.0%
ATTGGCGACGGAGCACGGGG+CGG - tig0016950:6345-6364 None:intergenic 70.0%
!! GGCATTGGCGACGGAGCACG+GGG - tig0016950:6348-6367 None:intergenic 70.0%
!! CGGCATTGGCGACGGAGCAC+GGG - tig0016950:6349-6368 None:intergenic 70.0%
!! GCGGCATTGGCGACGGAGCA+CGG - tig0016950:6350-6369 None:intergenic 70.0%
!! ATCGGAGGTGGTGGTGGCGG+CGG - tig0016950:6369-6388 None:intergenic 70.0%
ATCACCGGCGGTGGAGGTGG+TGG - tig0016950:6471-6490 None:intergenic 70.0%
GCCGACCGTGACGAAGGAGG+TGG - tig0016950:6540-6559 None:intergenic 70.0%
GTCGCCGACCGTGACGAAGG+AGG - tig0016950:6543-6562 None:intergenic 70.0%
TCCGTCGCCGACCGTGACGA+AGG - tig0016950:6546-6565 None:intergenic 70.0%
TTCGTCACGGTCGGCGACGG+AGG + tig0016950:6545-6564 Msa1360160:CDS 70.0%
GGTCGGCGACGGAGGAAGAG+TGG + tig0016950:6553-6572 Msa1360160:CDS 70.0%
! TGGTGGTGCGGCGGCGAGTA+TGG + tig0016950:6617-6636 Msa1360160:CDS 70.0%
AACTCCGGCGAGTGGGGTGG+TGG + tig0016950:6641-6660 Msa1360160:CDS 70.0%
ACTCCGGCGAGTGGGGTGGT+GGG + tig0016950:6642-6661 Msa1360160:CDS 70.0%
! CCCCAAGGGCACACCCTTGG+AGG + tig0016950:7768-7787 Msa1360160:intron 70.0%
! CCCCAAGGGCACACCCTTGG+AGG + tig0016950:7768-7787 Msa1360160:intron 70.0%
!! GGTGGCGGCGGCATTGGCGA+CGG - tig0016950:6357-6376 None:intergenic 75.0%
!! GGTGGTGGTGGCGGCGGCAT+TGG - tig0016950:6363-6382 None:intergenic 75.0%
!! GGTGGTGGCGGTGGAGGAGG+CGG - tig0016950:6456-6475 None:intergenic 75.0%
!! GGAGGTGGTGGCGGTGGAGG+AGG - tig0016950:6459-6478 None:intergenic 75.0%
!! GGTGGAGGTGGTGGCGGTGG+AGG - tig0016950:6462-6481 None:intergenic 75.0%
ACCGCCACCACCTCCACCGC+CGG + tig0016950:6464-6483 Msa1360160:CDS 75.0%
! ACCGGCGGTGGAGGTGGTGG+CGG - tig0016950:6468-6487 None:intergenic 75.0%
GGCAACTCCGGCGAGTGGGG+TGG + tig0016950:6638-6657 Msa1360160:CDS 75.0%
!! GGTGGCGGTGGAGGAGGCGG+AGG - tig0016950:6453-6472 None:intergenic 80.0%
!!! GGCGGTGGAGGTGGTGGCGG+TGG - tig0016950:6465-6484 None:intergenic 80.0%
! GGAGCACGGGGCGGCGGAGG+TGG - tig0016950:6336-6355 None:intergenic 85.0%
! GACGGAGCACGGGGCGGCGG+AGG - tig0016950:6339-6358 None:intergenic 85.0%
! GGCGACGGAGCACGGGGCGG+CGG - tig0016950:6342-6361 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0016950 gene 6105 16586 6105 ID=Msa1360160;Name=Msa1360160
tig0016950 mRNA 6105 16586 6105 ID=Msa1360160-mRNA-1;Parent=Msa1360160;Name=Msa1360160-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.5|0.66|1|1|1|3|443|543
tig0016950 exon 6105 6725 6105 ID=Msa1360160-mRNA-1:exon:11797;Parent=Msa1360160-mRNA-1
tig0016950 exon 13731 13954 13731 ID=Msa1360160-mRNA-1:exon:11798;Parent=Msa1360160-mRNA-1
tig0016950 exon 15357 16586 15357 ID=Msa1360160-mRNA-1:exon:11799;Parent=Msa1360160-mRNA-1
tig0016950 CDS 6105 6725 6105 ID=Msa1360160-mRNA-1:cds;Parent=Msa1360160-mRNA-1
tig0016950 CDS 13731 13954 13731 ID=Msa1360160-mRNA-1:cds;Parent=Msa1360160-mRNA-1
tig0016950 CDS 15357 16143 15357 ID=Msa1360160-mRNA-1:cds;Parent=Msa1360160-mRNA-1
tig0016950 three_prime_UTR 16144 16586 16144 ID=Msa1360160-mRNA-1:three_prime_utr;Parent=Msa1360160-mRNA-1
Gene Sequence

>Msa1360160

ATGGGTTGTTGCTATTCAAGAGTAGAGAGAGAAGAAACAGTGTCACATTGCAAATCAAGAAAACGTTACATGAAACAGTTGGTTGAAGCAAGACATGCTTTTTCAGCTTCACATGTTATGTACATTCGTTCTCTTCGTTCAACTGGTTCTGCTTTGTTTCACTTTGCTAACGCTGAAAAAACCACTCATCTTAACCACCATCTTCCACCTGAGCCACAACCCATTCTTCCACCTCCGCCGCCCCGTGCTCCGTCGCCAATGCCGCCGCCACCACCACCTCCGATGAGTCCTAGTTTGAGTTCTTATACTTGGACTTCTGGTACTGGTTCACAATCATCTGCACTTCCTCCGCCTCCTCCACCGCCACCACCTCCACCGCCGGTGATTTCATCTGGTTGGGATTTCTGGGATCCTTTCATGCAGCAACCTCCACCACCTCCTTCGTCACGGTCGGCGACGGAGGAAGAGTGGGAAGCTACTACTACCACTGGCTCTGAGGTGGTTGTGATGGCTGGTGGTGCGGCGGCGAGTATGGCAACTCCGGCGAGTGGGGTGGTGGGATACTCTAAGGAGTCAGGAAGTGAACTTGCAATGGTGGTTTCAAGAAACAGTAAAGATCTGAATGCTAAAACAATAAAGATGGAGCATGAGAAGAAGGTAGAATTGGTAAGGAAGTTAGAGATGAGAAGGGCTGATTATGTGAAGACAGAAAAGGCAAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCACAAACCATTGATAGTACATCCGCTGAAATCGTTAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAGCTTGTTAAAGGGTTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTTCAGAAGCACATAGTTCAGCAACTGGAATACCTCAATACCATACCATCAAATAACCCTACATCTGAAATTCATAGGCAATCAACACTTCAGCTGGAGCTTGAAGTACAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCCCACAGGGACTATATTGAATCCCTCAGTGGTTGGCTAAGGCTCAGCCTTTACCAATTTAGCCGAAACCCTCTTAGTAGAACAACTGAGGAGTCGAAGATATTCACCCTCTGCGAACAATGGCACCTTGCCGTTGAGCATATACCAGACAAAGTAGCATCTGAAGGAATAAAAAGCTTGTTGACGGTTATTCATGCGATTGTAGTTCAACAGACGGAGGAGCATAAACAAAAGAAGAAGTCAGAGTATGCGTTCAAGGAGTTCGAGAAGAAGGTGGTTCAGCTTAGATCTTTGGAGTGCAAGTATGGTCCGTACTCCATGTCGGAACGATCTGGTTCTGTGAGAAGAACGAAGGACCCTGTCGTGGAGAAGCGAGCTAAGGTGGAAGCTTTCAGAGCAAAGGCTGAAGAAGAGAAGATCAAGCATGAAAAGGCAGTGAGTGTTACAAGGTCAATGACATTGAATAACTTGCAAATGGGTTGTCCTCAAGTTTTTCAAGGGATTGTAGGGTTTTCAAGTGTGTGCATGGAGGCTTTTGAATCTGTATACAACAAAGCCAAAGTTGCCGAACAGGAGCGTGATGTGAAGAGAATATTACCTTAG
Protein sequence

>Msa1360160

MGCCYSRVEREETVSHCKSRKRYMKQLVEARHAFSASHVMYIRSLRSTGSALFHFANAEKTTHLNHHLPPEPQPILPPPPPRAPSPMPPPPPPPMSPSLSSYTWTSGTGSQSSALPPPPPPPPPPPPVISSGWDFWDPFMQQPPPPPSSRSATEEEWEATTTTGSEVVVMAGGAAASMATPASGVVGYSKESGSELAMVVSRNSKDLNAKTIKMEHEKKVELVRKLEMRRADYVKTEKAKKEVEKLESQMMVASQTIDSTSAEIVKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIESLSGWLRLSLYQFSRNPLSRTTEESKIFTLCEQWHLAVEHIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKKSEYAFKEFEKKVVQLRSLECKYGPYSMSERSGSVRRTKDPVVEKRAKVEAFRAKAEEEKIKHEKAVSVTRSMTLNNLQMGCPQVFQGIVGFSSVCMEAFESVYNKAKVAEQERDVKRILP*