AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0838240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838240 MtrunA17_Chr5g0405741 99.077 650 5 1 1 650 1 649 0.0 1328
Msa0838240 MtrunA17_Chr8g0335341 33.924 734 372 21 1 636 1 719 5.73e-105 334
Msa0838240 MtrunA17_Chr7g0250681 38.415 492 273 7 165 636 358 839 1.67e-96 315
Msa0838240 MtrunA17_Chr7g0250681 54.237 59 27 0 1 59 1 59 5.07e-12 69.3
Msa0838240 MtrunA17_Chr2g0331821 31.486 451 272 6 198 629 313 745 8.46e-57 205
Msa0838240 MtrunA17_Chr2g0331821 50.847 59 29 0 1 59 1 59 1.81e-12 70.5
Msa0838240 MtrunA17_Chr3g0139411 30.562 445 269 8 207 632 277 700 5.31e-54 196
Msa0838240 MtrunA17_Chr1g0211271 26.401 553 350 12 132 634 172 717 2.35e-52 192
Msa0838240 MtrunA17_Chr3g0124841 28.000 350 237 3 297 632 551 899 6.94e-45 172
Msa0838240 MtrunA17_Chr4g0004471 29.452 438 283 10 199 625 117 539 4.22e-40 154
Msa0838240 MtrunA17_Chr5g0448571 29.942 344 219 8 208 542 357 687 6.57e-38 150
Msa0838240 MtrunA17_Chr4g0072011 29.060 351 227 7 189 524 319 662 1.02e-35 143
Msa0838240 MtrunA17_Chr5g0440551 36.207 232 139 4 287 510 422 652 2.63e-33 136
Msa0838240 MtrunA17_Chr2g0298171 27.671 365 220 11 189 521 516 868 1.98e-32 134
Msa0838240 MtrunA17_Chr3g0118401 33.597 253 157 4 287 530 438 688 7.48e-32 132
Msa0838240 MtrunA17_Chr3g0143731 25.450 444 286 9 205 637 275 684 1.00e-29 125
Msa0838240 MtrunA17_Chr3g0130761 24.667 450 298 12 207 632 342 774 1.85e-27 118
Msa0838240 MtrunA17_Chr8g0382551 25.714 420 223 9 1 331 1 420 1.31e-20 95.1
Msa0838240 MtrunA17_Chr8g0382541 30.994 171 103 3 374 534 1 166 2.72e-20 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0838240 AT3G51290.3 58.445 669 230 11 1 650 1 640 0.0 692
Msa0838240 AT3G51290.2 59.940 664 217 12 1 644 1 635 0.0 680
Msa0838240 AT3G51290.1 57.549 669 230 12 1 650 1 634 0.0 670
Msa0838240 AT1G02110.1 40.774 439 244 7 205 636 270 699 6.10e-97 313
Msa0838240 AT2G34670.2 32.514 692 389 14 1 632 1 674 6.11e-91 297
Msa0838240 AT3G60320.1 35.659 516 280 11 141 636 309 792 1.31e-84 282
Msa0838240 AT3G60320.1 39.706 136 71 3 1 125 1 136 7.01e-11 65.9
Msa0838240 AT2G34670.1 31.306 559 309 12 1 502 1 541 2.30e-63 220
Msa0838240 AT5G25590.1 30.973 452 264 8 206 632 330 758 1.18e-54 200
Msa0838240 AT1G52320.1 28.450 471 304 8 193 646 314 768 4.35e-51 189
Msa0838240 AT1G52320.2 27.719 469 310 6 193 646 337 791 7.79e-51 189
Msa0838240 AT1G52320.5 27.719 469 310 6 193 646 337 791 7.79e-51 189
Msa0838240 AT1G52320.3 28.884 457 292 8 207 646 25 465 2.33e-50 182
Msa0838240 AT1G52320.4 28.884 457 292 8 207 646 25 465 2.33e-50 182
Msa0838240 AT1G21740.1 27.826 460 307 9 194 632 486 941 1.63e-48 183
Msa0838240 AT4G39790.1 25.700 607 334 16 1 510 9 595 9.14e-45 170
Msa0838240 AT1G77500.1 27.928 444 284 7 204 632 448 870 1.77e-43 168
Msa0838240 AT4G35240.4 26.077 441 279 9 209 635 423 830 9.26e-39 154
Msa0838240 AT4G35240.3 26.077 441 279 9 209 635 423 830 9.26e-39 154
Msa0838240 AT4G35240.2 26.077 441 279 9 209 635 423 830 9.37e-39 154
Msa0838240 AT4G35240.1 26.077 441 279 9 209 635 423 830 9.37e-39 154
Msa0838240 AT2G27090.2 29.581 382 230 6 205 549 307 686 1.14e-35 144
Msa0838240 AT2G27090.1 29.581 382 230 6 205 549 307 686 1.14e-35 144
Msa0838240 AT2G17110.1 29.814 322 206 5 209 515 313 629 3.46e-35 142
Msa0838240 AT1G20530.1 29.917 361 215 7 204 551 230 565 8.80e-35 140
Msa0838240 AT4G30130.3 31.250 368 220 9 185 524 279 641 9.83e-33 135
Msa0838240 AT4G30130.1 31.250 368 220 9 185 524 279 641 9.83e-33 135
Msa0838240 AT2G19090.1 29.383 405 239 12 153 524 334 724 1.12e-31 132
Msa0838240 AT5G54480.1 25.373 335 230 4 298 632 401 715 4.47e-26 114
Msa0838240 AT4G30130.4 32.727 220 128 4 185 389 279 493 1.85e-15 80.1
Msa0838240 AT4G30130.2 32.727 220 128 4 185 389 279 493 1.85e-15 80.1

Find 225 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTCATTGAACTTGTTAA+AGG 0.163552 5_4:+12628663 Msa0838240:CDS
CCGCTGAAATCGTTAAATTA+AGG 0.198328 5_4:+12628622 Msa0838240:CDS
AGTTCTTATACTTGGACTTC+TGG 0.218104 5_4:+12626970 Msa0838240:CDS
TAAGAGGGTTTCGGCTAAAT+TGG 0.237736 5_4:-12630326 None:intergenic
GGTGGTTCAGCTTAGATCTT+TGG 0.258572 5_4:+12630545 Msa0838240:CDS
GAGTCCATCAATGTGGGCTT+GGG 0.274226 5_4:+12627680 Msa0838240:CDS
AGATCTGGTTGAAGTTATTA+AGG 0.287678 5_4:+12627287 Msa0838240:CDS
CCTTCAGATGCTACTTTGTC+TGG 0.291223 5_4:-12630417 None:intergenic
CTGTTACAAGTTCCAAGTTC+TGG 0.295867 5_4:+12627363 Msa0838240:CDS
TTCCGTGAAACGCGGTAGTA+TGG 0.301653 5_4:+12631215 Msa0838240:three_prime_UTR
TGGTGGTGCGGCGGCGAGTA+TGG 0.312686 5_4:+12627185 Msa0838240:CDS
TGTTTAAGGAAAGGTTATTA+TGG 0.322387 5_4:-12626345 None:intergenic
AGTCCTAAACTGAATGGATT+TGG 0.323942 5_4:+12627711 Msa0838240:CDS
TTGCCAAATCCATTCAGTTT+AGG 0.324852 5_4:-12627714 None:intergenic
GGTGGAGGTGGCGGCGGTGG+AGG 0.328751 5_4:-12627027 None:intergenic
GGAGGTGGCGGCGGTGGAGG+AGG 0.333241 5_4:-12627024 None:intergenic
AGGAAAGGTTATTATGGTTT+GGG 0.335308 5_4:-12626339 None:intergenic
AAGGAAAGGTTATTATGGTT+TGG 0.336741 5_4:-12626340 None:intergenic
GGCGGTGGAGGTGGCGGCGG+TGG 0.338137 5_4:-12627030 None:intergenic
CTAGTTTGAGTTCTTATACT+TGG 0.340909 5_4:+12626962 Msa0838240:CDS
GGAAGAATGGGTTGTGGCTC+AGG 0.343501 5_4:-12626880 None:intergenic
ATGTCCGTGCCAATGCTTCA+TGG 0.353967 5_4:+12631056 Msa0838240:three_prime_UTR
ATTCGTTCTCTTCGTTCAAC+TGG 0.361840 5_4:+12626796 Msa0838240:CDS
GGTGGCGGCGGTGGAGGAGG+CGG 0.362022 5_4:-12627021 None:intergenic
TTGTTCTACTAAGAGGGTTT+CGG 0.362841 5_4:-12630335 None:intergenic
GGTGGTGGTGGCGGCGGCAT+TGG 0.364079 5_4:-12626928 None:intergenic
GACATTGAATAACTTGCAAA+TGG 0.364382 5_4:+12630728 Msa0838240:CDS
TCTGAGGTGGTTGTGATGGC+TGG 0.368338 5_4:+12627165 Msa0838240:CDS
GGAGCACGCGGCGGCGGAGG+TGG 0.371641 5_4:-12626901 None:intergenic
GAACCCCAAGCCCACATTGA+TGG 0.373780 5_4:-12627684 None:intergenic
AACTCATTGAACTTGTTAAA+GGG 0.373818 5_4:+12628664 Msa0838240:CDS
AGATCTTTGGAGTGCAAGTA+TGG 0.374680 5_4:+12630558 Msa0838240:CDS
AGTAGGGTTGTAGGAGTATC+AGG 0.374874 5_4:-12631128 None:intergenic
CGCTGAAATCGTTAAATTAA+GGG 0.377951 5_4:+12628623 Msa0838240:CDS
GTTCTTATACTTGGACTTCT+GGG 0.378361 5_4:+12626971 Msa0838240:CDS
GGCGACGGAGCACGCGGCGG+CGG 0.379586 5_4:-12626907 None:intergenic
ATCACCGGCGGTGGAGGTGG+CGG 0.380753 5_4:-12627036 None:intergenic
CAAAGCCAAAGTTGCCGAAC+AGG 0.385210 5_4:+12630824 Msa0838240:CDS
GCATGAGAAGAAGGTAGAAT+TGG 0.386261 5_4:+12628485 Msa0838240:CDS
GGCGGCGGTGGAGGAGGCGG+AGG 0.389223 5_4:-12627018 None:intergenic
ATCCTTCTGCAACCTCTTCA+AGG 0.396106 5_4:+12630251 Msa0838240:CDS
GACGGAGCACGCGGCGGCGG+AGG 0.400909 5_4:-12626904 None:intergenic
TGAGTCCATCAATGTGGGCT+TGG 0.401240 5_4:+12627679 Msa0838240:CDS
TCCTCAGTTGTTCTACTAAG+AGG 0.406306 5_4:-12630342 None:intergenic
ACGCTCCTGTTCGGCAACTT+TGG 0.408625 5_4:-12630829 None:intergenic
GCTAATAATGGTGTTGGAAA+TGG 0.409299 5_4:+12627771 Msa0838240:CDS
GCCGGTGATTTCATCCGGTT+GGG 0.410597 5_4:+12627050 Msa0838240:CDS
TTCGTCGCGGTCTGCGACGG+AGG 0.412074 5_4:+12627113 Msa0838240:CDS
GAAGTCAGAGTATGCGTTCA+AGG 0.414553 5_4:+12630509 Msa0838240:CDS
GAAATCACCGGCGGTGGAGG+TGG 0.415126 5_4:-12627039 None:intergenic
TCAGATGTAGGGTTATTTGA+TGG 0.416093 5_4:-12630174 None:intergenic
TTCAAGAAACAGTAAAGATC+TGG 0.421580 5_4:+12627272 Msa0838240:CDS
CCATTCACCTCCATTGCAGT+AGG 0.421855 5_4:-12631145 None:intergenic
AGCTACTCACCTTGACCTCT+TGG 0.422364 5_4:-12627845 None:intergenic
ACCGGCGGTGGAGGTGGCGG+CGG 0.423187 5_4:-12627033 None:intergenic
TGGTGTGGTGGGGTATTCTA+AGG 0.424929 5_4:+12627221 Msa0838240:CDS
GTAGGTAAAATGTACGGAAA+TGG 0.432180 5_4:+12627648 Msa0838240:intron
ACTCCGGCGAGTGGTGTGGT+GGG 0.436656 5_4:+12627210 Msa0838240:CDS
ATCGGAGGTGGTGGTGGCGG+CGG 0.436722 5_4:-12626934 None:intergenic
TATTTGATGGTATGGTATTG+AGG 0.437293 5_4:-12630161 None:intergenic
CGCCGGTGATTTCATCCGGT+TGG 0.437559 5_4:+12627049 Msa0838240:CDS
TCTTCAAGTCCTAAACTGAA+TGG 0.440329 5_4:+12627705 Msa0838240:CDS
TTTCTTAAAGCTGCTGATGC+TGG 0.441699 5_4:+12627324 Msa0838240:CDS
CTCATCGGAGGTGGTGGTGG+CGG 0.441856 5_4:-12626937 None:intergenic
GCCTATGAATTTCAGATGTA+GGG 0.442368 5_4:-12630185 None:intergenic
ACCCTACATCTGAAATTCAT+AGG 0.445628 5_4:+12630184 Msa0838240:CDS
GGACTCATCGGAGGTGGTGG+TGG 0.448295 5_4:-12626940 None:intergenic
TTTAGGGCTAATAATGGTGT+TGG 0.449008 5_4:+12627765 Msa0838240:CDS
TGTAGGGTTATTTGATGGTA+TGG 0.450510 5_4:-12630169 None:intergenic
TACTCCATGTCGGAACGATC+TGG 0.451657 5_4:+12630585 Msa0838240:CDS
CGGCGGCGGAGGTGGAAGAA+TGG 0.453885 5_4:-12626893 None:intergenic
TTCAGCGGATGTACTATCAA+TGG 0.454069 5_4:-12628607 None:intergenic
TGGCTCTGAGGTGGTTGTGA+TGG 0.455742 5_4:+12627161 Msa0838240:CDS
TGCCTATGAATTTCAGATGT+AGG 0.455749 5_4:-12630186 None:intergenic
TACTCCGGCGAGTGGTGTGG+TGG 0.457368 5_4:+12627209 Msa0838240:CDS
CTCCATTGCAGTAGGGTTGT+AGG 0.457572 5_4:-12631137 None:intergenic
TCAAGTTTCATGATATTACT+AGG 0.458255 5_4:-12631103 None:intergenic
TCTACCGATCATAAGGCAAA+AGG 0.462092 5_4:-12630912 None:intergenic
TCAGAAATGAAGATGGGTAG+AGG 0.464968 5_4:-12626572 None:intergenic
CAGAAGCTGTGAACTTTCCT+AGG 0.468264 5_4:+12631281 Msa0838240:three_prime_UTR
TGGTGGACATTGCTCTACTT+TGG 0.468275 5_4:+12627791 Msa0838240:CDS
GGCGGCGGAGGTGGAAGAAT+GGG 0.470556 5_4:-12626892 None:intergenic
CTTCACATCACGCTCCTGTT+CGG 0.472977 5_4:-12630838 None:intergenic
ATTGCAATCTACCGATCATA+AGG 0.474198 5_4:-12630919 None:intergenic
GGTGGCGGCGGCATTGGCGA+CGG 0.474914 5_4:-12626922 None:intergenic
GAAGCACATAGTTCAGCAAC+TGG 0.477790 5_4:+12630134 Msa0838240:CDS
CGCGACGAAGGAGGTGGTGG+AGG 0.479927 5_4:-12627099 None:intergenic
TATACTTGGACTTCTGGGAC+TGG 0.485331 5_4:+12626976 Msa0838240:CDS
TTAGCTCGCTTCTCCACGAC+AGG 0.487341 5_4:-12630630 None:intergenic
TGAAGAGGTTGCAGAAGGAT+TGG 0.490204 5_4:-12630248 None:intergenic
AAAGATGGAGCATGAGAAGA+AGG 0.491152 5_4:+12628476 Msa0838240:CDS
TAACAAGTTCAATGAGTTGA+GGG 0.491822 5_4:-12628659 None:intergenic
CCACCGCCGGTGATTTCATC+CGG 0.491889 5_4:+12627045 Msa0838240:CDS
GAAATTAGAATCACAAATGA+TGG 0.492400 5_4:+12628572 Msa0838240:CDS
TAAGGAAGTTAGAGATGAGA+AGG 0.492702 5_4:+12628508 Msa0838240:CDS
AGAAGAAGGTAGAATTGGTA+AGG 0.495311 5_4:+12628490 Msa0838240:CDS
TAGGCAATCAACACTTCAGC+TGG 0.495649 5_4:+12630203 Msa0838240:CDS
CAGAAATGAAGATGGGTAGA+GGG 0.497201 5_4:-12626571 None:intergenic
GATGAAATCACCGGCGGTGG+AGG 0.498028 5_4:-12627042 None:intergenic
CATTCACCTCCATTGCAGTA+GGG 0.498363 5_4:-12631144 None:intergenic
AGAGAAGATCAAGCATGAAA+AGG 0.498964 5_4:+12630683 Msa0838240:CDS
GAATGCTAAAACAATAAAGA+TGG 0.499919 5_4:+12628461 Msa0838240:intron
TGTGAAGAGAATATTACCTT+AGG 0.501697 5_4:+12630854 Msa0838240:CDS
CAAGTATAAGAACTCAAACT+AGG 0.505251 5_4:-12626961 None:intergenic
GACCGCGACGAAGGAGGTGG+TGG 0.508380 5_4:-12627102 None:intergenic
AGTCCATCAATGTGGGCTTG+GGG 0.509308 5_4:+12627681 Msa0838240:CDS
CCTCAGTTGTTCTACTAAGA+GGG 0.511516 5_4:-12630341 None:intergenic
GCAACCTCTTCAAGGCCCAC+AGG 0.513509 5_4:+12630259 Msa0838240:CDS
CCGGATGAAATCACCGGCGG+TGG 0.513552 5_4:-12627045 None:intergenic
CTAGGACTCATCGGAGGTGG+TGG 0.522370 5_4:-12626943 None:intergenic
ACAATCTATCCATGAAGCAT+TGG 0.525949 5_4:-12631065 None:intergenic
GGTTGTGATGGCTGGTGGTG+CGG 0.526368 5_4:+12627173 Msa0838240:CDS
ACTCAGTGAGGAATAACAAA+AGG 0.526995 5_4:-12631186 None:intergenic
ACCGCCGCCACCTCCACCGC+CGG 0.527997 5_4:+12627032 Msa0838240:CDS
CGTGGAGAAGCGAGCTAAGG+TGG 0.529785 5_4:+12630635 Msa0838240:CDS
GTTGTGGCTCAGGTGGAAGA+TGG 0.530578 5_4:-12626870 None:intergenic
AGAAAAGGCAAAGAAAGAAG+TGG 0.531914 5_4:+12628548 Msa0838240:CDS
CTCCGGCGAGTGGTGTGGTG+GGG 0.533094 5_4:+12627211 Msa0838240:CDS
AATCCCTCAGTGGTTGGCTA+AGG 0.534625 5_4:+12630292 Msa0838240:CDS
GTCTGCGACGGAGGAAGAGT+GGG 0.535773 5_4:+12627122 Msa0838240:CDS
AGGAAGTGAACTTGCAATGG+TGG 0.536931 5_4:+12627248 Msa0838240:CDS
TTAACAAGTTCAATGAGTTG+AGG 0.546156 5_4:-12628660 None:intergenic
CTTTGGAGAGGCTATATGCA+TGG 0.547076 5_4:+12627808 Msa0838240:CDS
GGCATTGGCGACGGAGCACG+CGG 0.547402 5_4:-12626913 None:intergenic
GTTCAAGGAGTTCGAGAAGA+AGG 0.549473 5_4:+12630524 Msa0838240:CDS
TACCCCACCACACCACTCGC+CGG 0.558007 5_4:-12627213 None:intergenic
CCTACTGCAATGGAGGTGAA+TGG 0.559874 5_4:+12631145 Msa0838240:three_prime_UTR
ACATTGAATAACTTGCAAAT+GGG 0.560318 5_4:+12630729 Msa0838240:CDS
CTACCGATCATAAGGCAAAA+GGG 0.560655 5_4:-12630911 None:intergenic
GTTGAGATCAGAAATGAAGA+TGG 0.562472 5_4:-12626579 None:intergenic
GGTCTGCGACGGAGGAAGAG+TGG 0.563525 5_4:+12627121 Msa0838240:CDS
TGATTATGTGAAGACAGAAA+AGG 0.563772 5_4:+12628533 Msa0838240:CDS
GTAAAATGTACGGAAATGGA+TGG 0.566408 5_4:+12627652 Msa0838240:CDS
GAACTCAAACTAGGACTCAT+CGG 0.567558 5_4:-12626952 None:intergenic
ATGAAGCATTGGCACGGACA+TGG 0.568673 5_4:-12631054 None:intergenic
TCTTCATCAACAAGGCTATG+TGG 0.569222 5_4:-12626371 None:intergenic
GCAGACCGCGACGAAGGAGG+TGG 0.569457 5_4:-12627105 None:intergenic
GGTTTCGGCTAAATTGGTAA+AGG 0.569697 5_4:-12630320 None:intergenic
CTCCTACAACCCTACTGCAA+TGG 0.569858 5_4:+12631135 Msa0838240:three_prime_UTR
AAGGAAGTTAGAGATGAGAA+GGG 0.570552 5_4:+12628509 Msa0838240:CDS
GAGGTGGTTGTGATGGCTGG+TGG 0.571563 5_4:+12627168 Msa0838240:CDS
TCCCAACCGGATGAAATCAC+CGG 0.571658 5_4:-12627051 None:intergenic
TGCGATTGTAGTTCAACAGA+CGG 0.572167 5_4:+12630467 Msa0838240:CDS
TGTGGGTGTTGAGTCATTGT+CGG 0.573362 5_4:-12630965 None:intergenic
GGTAGATTGCAATGTAGCAC+TGG 0.574386 5_4:+12630929 Msa0838240:three_prime_UTR
AGAATGGGTTGTGGCTCAGG+TGG 0.576840 5_4:-12626877 None:intergenic
CTGTGAACTTTCCTAGGCGT+GGG 0.577027 5_4:+12631287 Msa0838240:three_prime_UTR
GGTGGAGGTTGCTGCATGAA+AGG 0.577342 5_4:-12627084 None:intergenic
TACTACCACTGGCTCTGAGG+TGG 0.577905 5_4:+12627152 Msa0838240:CDS
GGCCTTGAAGAGGTTGCAGA+AGG 0.580739 5_4:-12630253 None:intergenic
CTACAACCCTACTGCAATGG+AGG 0.581879 5_4:+12631138 Msa0838240:three_prime_UTR
GAAATTGTACCAAGAGGTCA+AGG 0.582633 5_4:+12627836 Msa0838240:CDS
CCTTAATTTAACGATTTCAG+CGG 0.583461 5_4:-12628622 None:intergenic
ATATTGAATCCCTCAGTGGT+TGG 0.583645 5_4:+12630286 Msa0838240:CDS
CTGTCTCAAGAGGTTTCTGT+TGG 0.584325 5_4:+12627738 Msa0838240:CDS
CTGGTATATGCTCAACGGCA+AGG 0.584813 5_4:-12630398 None:intergenic
GCTGTGAACTTTCCTAGGCG+TGG 0.585934 5_4:+12631286 Msa0838240:three_prime_UTR
AAAACGTTACATGAAACAGT+TGG 0.586207 5_4:+12626732 Msa0838240:CDS
GATCGTTCCGACATGGAGTA+CGG 0.586607 5_4:-12630582 None:intergenic
AAAAGGCAGTGAGTGTTACA+AGG 0.586835 5_4:+12630700 Msa0838240:CDS
AATAATGGTGTTGGAAATGG+TGG 0.587362 5_4:+12627774 Msa0838240:CDS
GTGGCTCAGGTGGAAGATGG+TGG 0.588457 5_4:-12626867 None:intergenic
GAGCCTTAGCCAACCACTGA+GGG 0.589727 5_4:-12630295 None:intergenic
GAATTTGAGTCCATCAATGT+GGG 0.590249 5_4:+12627674 Msa0838240:CDS
AGTCCCTGTGGGCCTTGAAG+AGG 0.594322 5_4:-12630263 None:intergenic
AAACTAGGACTCATCGGAGG+TGG 0.594612 5_4:-12626946 None:intergenic
GACATTGCTCTACTTTGGAG+AGG 0.594696 5_4:+12627796 Msa0838240:CDS
TTTGGGTTATGTCTGTGTAG+TGG 0.596450 5_4:-12626322 None:intergenic
ATTGGCGACGGAGCACGCGG+CGG 0.597977 5_4:-12626910 None:intergenic
ATTTGGCAAGCTGTCTCAAG+AGG 0.598339 5_4:+12627728 Msa0838240:CDS
TTTGGAGAGGCTATATGCAT+GGG 0.600762 5_4:+12627809 Msa0838240:CDS
TGTGATGGCTGGTGGTGCGG+CGG 0.601290 5_4:+12627176 Msa0838240:CDS
GGCTACTCCGGCGAGTGGTG+TGG 0.602614 5_4:+12627206 Msa0838240:CDS
TTGAGATCAGAAATGAAGAT+GGG 0.604170 5_4:-12626578 None:intergenic
ATGGGTAGAGGGTAGTGTAG+TGG 0.604325 5_4:-12626560 None:intergenic
ACATGGACACAACACTCACA+TGG 0.604345 5_4:-12631037 None:intergenic
CACAACACTCACATGGACAC+CGG 0.605227 5_4:-12631030 None:intergenic
GGGTTATGTCTGTGTAGTGG+AGG 0.606284 5_4:-12626319 None:intergenic
CCAGACAAAGTAGCATCTGA+AGG 0.606651 5_4:+12630417 Msa0838240:CDS
GTCGCAGACCGCGACGAAGG+AGG 0.608516 5_4:-12627108 None:intergenic
ATGGTGGTAGGTAAAATGTA+CGG 0.609045 5_4:+12627642 Msa0838240:intron
TGTCGTGGAGAAGCGAGCTA+AGG 0.609115 5_4:+12630632 Msa0838240:CDS
TATTCACCCTCTGCGAACAA+TGG 0.609504 5_4:+12630373 Msa0838240:CDS
GTCAGGAAGTGAACTTGCAA+TGG 0.609741 5_4:+12627245 Msa0838240:CDS
TACTACTACCACTGGCTCTG+AGG 0.610685 5_4:+12627149 Msa0838240:CDS
TTTAATGTAAACTACATGTG+TGG 0.611852 5_4:-12630983 None:intergenic
GGTGGAAGCTTTCAGAGCAA+AGG 0.612220 5_4:+12630653 Msa0838240:CDS
TGGGAAGCTACTACTACCAC+TGG 0.612359 5_4:+12627141 Msa0838240:CDS
AGAACCAGATCGTTCCGACA+TGG 0.612832 5_4:-12630589 None:intergenic
CTGAAACATCTTCATCAACA+AGG 0.615120 5_4:-12626379 None:intergenic
TCCGTCGCAGACCGCGACGA+AGG 0.615215 5_4:-12627111 None:intergenic
AAGGTGCCATTGTTCGCAGA+GGG 0.617481 5_4:-12630379 None:intergenic
GCTGCAACGTTCCCACGCCT+AGG 0.621616 5_4:-12631298 None:intergenic
CACAACCACCTCAGAGCCAG+TGG 0.624285 5_4:-12627157 None:intergenic
CAAGGAGTTCGAGAAGAAGG+TGG 0.624953 5_4:+12630527 Msa0838240:CDS
CAACCTCTTCAAGGCCCACA+GGG 0.625842 5_4:+12630260 Msa0838240:CDS
GTCATACATTCCGTGAAACG+CGG 0.629113 5_4:+12631207 Msa0838240:three_prime_UTR
TTACCTTAGGAAAATTGACA+TGG 0.630359 5_4:+12630867 Msa0838240:exon
TTATTTCTAAATGCATGCAG+TGG 0.631776 5_4:+12631255 Msa0838240:three_prime_UTR
TTGGCAGGTTGATGTGCATG+TGG 0.634595 5_4:+12630082 Msa0838240:intron
GGAGGTGGAAGAATGGGTTG+TGG 0.635584 5_4:-12626886 None:intergenic
TTAATGTAAACTACATGTGT+GGG 0.637311 5_4:-12630982 None:intergenic
GGATTCAATATAGTCCCTGT+GGG 0.637488 5_4:-12630274 None:intergenic
GGCGGCGAGTATGGCTACTC+CGG 0.638070 5_4:+12627194 Msa0838240:CDS
CAAGGTGCCATTGTTCGCAG+AGG 0.639669 5_4:-12630380 None:intergenic
AAGAACGAAGGACCCTGTCG+TGG 0.642509 5_4:+12630617 Msa0838240:CDS
GGGATTCAATATAGTCCCTG+TGG 0.644115 5_4:-12630275 None:intergenic
AAGATGGTGGTTAAGATGAG+TGG 0.644159 5_4:-12626854 None:intergenic
GGAATTTGAGTCCATCAATG+TGG 0.647299 5_4:+12627673 Msa0838240:CDS
AGTATGGCTACTCCGGCGAG+TGG 0.648744 5_4:+12627201 Msa0838240:CDS
TTTGTCTGGTATATGCTCAA+CGG 0.655425 5_4:-12630403 None:intergenic
TGGAGCTTGAAGTACAGCAA+TGG 0.657391 5_4:+12630223 Msa0838240:CDS
CTCCACCACCTCCTTCGTCG+CGG 0.662257 5_4:+12627100 Msa0838240:CDS
CCCTCTTAGTAGAACAACTG+AGG 0.665771 5_4:+12630341 Msa0838240:CDS
CTATCCATGAAGCATTGGCA+CGG 0.672447 5_4:-12631060 None:intergenic
GGAGAAGAAATTGTACCAAG+AGG 0.672591 5_4:+12627830 Msa0838240:CDS
TGGTTCTGTGAGAAGAACGA+AGG 0.676496 5_4:+12630605 Msa0838240:CDS
GACTATATTGAATCCCTCAG+TGG 0.688023 5_4:+12630282 Msa0838240:CDS
TAGCTCGCTTCTCCACGACA+GGG 0.695149 5_4:-12630629 None:intergenic
TGAGCCTTAGCCAACCACTG+AGG 0.698511 5_4:-12630296 None:intergenic
ACGGAATGTATGACTCAGTG+AGG 0.698840 5_4:-12631198 None:intergenic
GTATGGTCCGTACTCCATGT+CGG 0.723585 5_4:+12630575 Msa0838240:CDS
CAACCGGATGAAATCACCGG+CGG 0.730184 5_4:-12627048 None:intergenic
CTCAAACTAGGACTCATCGG+AGG 0.735263 5_4:-12626949 None:intergenic
GATTGTAGTTCAACAGACGG+AGG 0.775056 5_4:+12630470 Msa0838240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATGGTTTTTTTTTTTA+TGG - chr5_4:12626617-12626636 None:intergenic 10.0%
!!! CATAGTATTTATTATTTTTT+TGG + chr5_4:12628766-12628785 Msa0838240:intron 10.0%
!! ATAAAATAACAAAACAAATT+TGG - chr5_4:12630022-12630041 None:intergenic 10.0%
!!! TTGATTTCTTTTTGTTTTAT+GGG - chr5_4:12626486-12626505 None:intergenic 15.0%
!! TAAAATTTCAAATCTCAAAT+AGG - chr5_4:12627464-12627483 None:intergenic 15.0%
!!! TATTTGAGATTTGAAATTTT+AGG + chr5_4:12627463-12627482 Msa0838240:intron 15.0%
!!! TTTTTGTATTTGAATTTTGA+AGG + chr5_4:12627599-12627618 Msa0838240:intron 15.0%
!! AATTCTCAAATTAACAATTA+AGG - chr5_4:12627991-12628010 None:intergenic 15.0%
!! AAAAGAAAAAAGAGAAATAA+AGG + chr5_4:12628166-12628185 Msa0838240:intron 15.0%
!! TAATGAATCTAATAACAAAA+AGG - chr5_4:12628378-12628397 None:intergenic 15.0%
!!! ATAAAAAATATTGTTTTCGT+AGG + chr5_4:12629811-12629830 Msa0838240:intron 15.0%
!! AAAAAACAAGAACTTTAACT+AGG - chr5_4:12626457-12626476 None:intergenic 20.0%
!!! GTTGATTTCTTTTTGTTTTA+TGG - chr5_4:12626487-12626506 None:intergenic 20.0%
!! TAGTTGAAGAAAAAGAAAAT+GGG + chr5_4:12626655-12626674 Msa0838240:exon 20.0%
!! CAAATTACAATAAGCAAAAA+AGG - chr5_4:12627539-12627558 None:intergenic 20.0%
!!! AATTACTAATGATTTGGATT+TGG - chr5_4:12628046-12628065 None:intergenic 20.0%
!!! TAACTTCGATGATATTTTTT+TGG + chr5_4:12628428-12628447 Msa0838240:intron 20.0%
!!! TTTTTAACAAGGAAAAGTTA+AGG - chr5_4:12628911-12628930 None:intergenic 20.0%
!!! ACAAGATCATTTTTTTAACA+AGG - chr5_4:12628922-12628941 None:intergenic 20.0%
!!! TTATTTTGTGTAACAATAGA+TGG + chr5_4:12629478-12629497 Msa0838240:intron 20.0%
!!! TATTTTGTGTAACAATAGAT+GGG + chr5_4:12629479-12629498 Msa0838240:intron 20.0%
!!! TATACTTTTTCCATTACTTT+GGG + chr5_4:12629568-12629587 Msa0838240:intron 20.0%
!!! TAATTTTAAATCTTTGACAC+AGG - chr5_4:12629671-12629690 None:intergenic 20.0%
!! AAGTGACAATAATTTAATTC+CGG - chr5_4:12629727-12629746 None:intergenic 20.0%
! TGTTTAAGGAAAGGTTATTA+TGG - chr5_4:12626348-12626367 None:intergenic 25.0%
!!! TCTTGAACTTTGATTTTTGT+TGG - chr5_4:12626521-12626540 None:intergenic 25.0%
!! CAAAGAAAGCACAATAAAAA+TGG - chr5_4:12626632-12626651 None:intergenic 25.0%
! CTAGTTGAAGAAAAAGAAAA+TGG + chr5_4:12626654-12626673 Msa0838240:exon 25.0%
!! TACATGCATGTCATAAATTT+TGG + chr5_4:12627417-12627436 Msa0838240:intron 25.0%
!! TTTTTGTTGAGTGTTAATGA+AGG + chr5_4:12627503-12627522 Msa0838240:intron 25.0%
! TCACACAATTACTAATGATT+TGG - chr5_4:12628052-12628071 None:intergenic 25.0%
! AATTATATTACCCTCTAAGT+AGG - chr5_4:12628092-12628111 None:intergenic 25.0%
! TTATCAAATCAACCTTAGTT+TGG - chr5_4:12628338-12628357 None:intergenic 25.0%
! CGAAGTTAAGCAATTATTAA+TGG - chr5_4:12628416-12628435 None:intergenic 25.0%
!!! TTCGATGATATTTTTTTGGT+TGG + chr5_4:12628432-12628451 Msa0838240:intron 25.0%
! GAATGCTAAAACAATAAAGA+TGG + chr5_4:12628461-12628480 Msa0838240:intron 25.0%
! GAAATTAGAATCACAAATGA+TGG + chr5_4:12628572-12628591 Msa0838240:CDS 25.0%
!!! AACTCATTGAACTTGTTAAA+GGG + chr5_4:12628664-12628683 Msa0838240:CDS 25.0%
!! AAAATGATCTTGTTAACTTG+CGG + chr5_4:12628929-12628948 Msa0838240:intron 25.0%
! TCGTTATTGTGTAATATGTT+AGG - chr5_4:12628955-12628974 None:intergenic 25.0%
!! ATTTTATACTGTACTATGCT+AGG - chr5_4:12629218-12629237 None:intergenic 25.0%
!! AACTACTTTATAGTTTTTGC+TGG + chr5_4:12629252-12629271 Msa0838240:intron 25.0%
!! TTTCCCAATGTACTTTTATA+TGG + chr5_4:12629450-12629469 Msa0838240:intron 25.0%
!! CATCCATATAAAAGTACATT+GGG - chr5_4:12629456-12629475 None:intergenic 25.0%
!!! CTATACTTTTTCCATTACTT+TGG + chr5_4:12629567-12629586 Msa0838240:intron 25.0%
! TAGAGACAATTTGAATAAAG+TGG + chr5_4:12629619-12629638 Msa0838240:intron 25.0%
!! AAATATTGTTTTCGTAGGAT+CGG + chr5_4:12629816-12629835 Msa0838240:intron 25.0%
!! ACAAAAAACACTGTTTTCTT+AGG + chr5_4:12629873-12629892 Msa0838240:intron 25.0%
! ACTATCAGTTTATACATCAA+TGG - chr5_4:12629923-12629942 None:intergenic 25.0%
!!! TCTTTATTTTCTCACTTTAG+AGG + chr5_4:12629994-12630013 Msa0838240:intron 25.0%
!! ACATTGAATAACTTGCAAAT+GGG + chr5_4:12630729-12630748 Msa0838240:CDS 25.0%
! TTAATGTAAACTACATGTGT+GGG - chr5_4:12630985-12631004 None:intergenic 25.0%
! TTTAATGTAAACTACATGTG+TGG - chr5_4:12630986-12631005 None:intergenic 25.0%
!! TCACATTTTCAAATGATTAC+CGG + chr5_4:12631011-12631030 Msa0838240:three_prime_UTR 25.0%
! TCAAGTTTCATGATATTACT+AGG - chr5_4:12631106-12631125 None:intergenic 25.0%
AGGAAAGGTTATTATGGTTT+GGG - chr5_4:12626342-12626361 None:intergenic 30.0%
AAGGAAAGGTTATTATGGTT+TGG - chr5_4:12626343-12626362 None:intergenic 30.0%
!!! ATGTGGTTTTGTTTAAGGAA+AGG - chr5_4:12626357-12626376 None:intergenic 30.0%
!!! TTCTTTTTGTTTTATGGGTG+TGG - chr5_4:12626481-12626500 None:intergenic 30.0%
TTGAGATCAGAAATGAAGAT+GGG - chr5_4:12626581-12626600 None:intergenic 30.0%
AAAACGTTACATGAAACAGT+TGG + chr5_4:12626732-12626751 Msa0838240:CDS 30.0%
CAAGTATAAGAACTCAAACT+AGG - chr5_4:12626964-12626983 None:intergenic 30.0%
! CTAGTTTGAGTTCTTATACT+TGG + chr5_4:12626962-12626981 Msa0838240:CDS 30.0%
TTCAAGAAACAGTAAAGATC+TGG + chr5_4:12627272-12627291 Msa0838240:CDS 30.0%
AGATCTGGTTGAAGTTATTA+AGG + chr5_4:12627287-12627306 Msa0838240:CDS 30.0%
TGTGATGTAATTGTACTTGA+TGG + chr5_4:12627623-12627642 Msa0838240:intron 30.0%
TTCTACAAAATCCTACTTAG+AGG + chr5_4:12628078-12628097 Msa0838240:intron 30.0%
TCTACAAAATCCTACTTAGA+GGG + chr5_4:12628079-12628098 Msa0838240:intron 30.0%
AGAGAAATAAAGGTTGAAGA+AGG + chr5_4:12628176-12628195 Msa0838240:intron 30.0%
!! AAGAAGGTTTTGTCTTTTGT+GGG + chr5_4:12628192-12628211 Msa0838240:intron 30.0%
TGGAGACTTCAAAAAAATGA+GGG - chr5_4:12628318-12628337 None:intergenic 30.0%
TTGGAGACTTCAAAAAAATG+AGG - chr5_4:12628319-12628338 None:intergenic 30.0%
!!! TTTTTGAAGTCTCCAAACTA+AGG + chr5_4:12628323-12628342 Msa0838240:intron 30.0%
TGATTATGTGAAGACAGAAA+AGG + chr5_4:12628533-12628552 Msa0838240:CDS 30.0%
CCTTAATTTAACGATTTCAG+CGG - chr5_4:12628625-12628644 None:intergenic 30.0%
CGCTGAAATCGTTAAATTAA+GGG + chr5_4:12628623-12628642 Msa0838240:CDS 30.0%
! TAACAAGTTCAATGAGTTGA+GGG - chr5_4:12628662-12628681 None:intergenic 30.0%
TTAACAAGTTCAATGAGTTG+AGG - chr5_4:12628663-12628682 None:intergenic 30.0%
!! CAACTCATTGAACTTGTTAA+AGG + chr5_4:12628663-12628682 Msa0838240:CDS 30.0%
TTGTTCAAAAAACGAGATTC+TGG - chr5_4:12629361-12629380 None:intergenic 30.0%
ATCACCAAGAACAAGAAAAA+GGG - chr5_4:12629406-12629425 None:intergenic 30.0%
AATCACCAAGAACAAGAAAA+AGG - chr5_4:12629407-12629426 None:intergenic 30.0%
AAGTACATTGGGAAAATAGA+TGG - chr5_4:12629445-12629464 None:intergenic 30.0%
! GCATCCATATAAAAGTACAT+TGG - chr5_4:12629457-12629476 None:intergenic 30.0%
! GTAATGGAAAAAGTATAGCA+TGG - chr5_4:12629565-12629584 None:intergenic 30.0%
! CATTTTACTGAATGATTCTC+CGG + chr5_4:12629705-12629724 Msa0838240:intron 30.0%
! AAACACTGTTTTCTTAGGAT+CGG + chr5_4:12629878-12629897 Msa0838240:intron 30.0%
! TATTTGATGGTATGGTATTG+AGG - chr5_4:12630164-12630183 None:intergenic 30.0%
!! AGGAATAAAAAGCTTGTTGA+CGG + chr5_4:12630437-12630456 Msa0838240:CDS 30.0%
! GACATTGAATAACTTGCAAA+TGG + chr5_4:12630728-12630747 Msa0838240:CDS 30.0%
!!! AAGTTTTTCAAGGGATTGTA+GGG + chr5_4:12630760-12630779 Msa0838240:CDS 30.0%
TGTGAAGAGAATATTACCTT+AGG + chr5_4:12630854-12630873 Msa0838240:CDS 30.0%
TTACCTTAGGAAAATTGACA+TGG + chr5_4:12630867-12630886 Msa0838240:exon 30.0%
!! TTATTTCTAAATGCATGCAG+TGG + chr5_4:12631255-12631274 Msa0838240:three_prime_UTR 30.0%
!!! AGGCTATGTGGTTTTGTTTA+AGG - chr5_4:12626362-12626381 None:intergenic 35.0%
CTGAAACATCTTCATCAACA+AGG - chr5_4:12626382-12626401 None:intergenic 35.0%
! TAGTGTAGTTGTCTGTTTTG+TGG - chr5_4:12626419-12626438 None:intergenic 35.0%
!! CTTTGATTTTTGTTGGCAAG+TGG - chr5_4:12626514-12626533 None:intergenic 35.0%
GTTGAGATCAGAAATGAAGA+TGG - chr5_4:12626582-12626601 None:intergenic 35.0%
AGTTCTTATACTTGGACTTC+TGG + chr5_4:12626970-12626989 Msa0838240:CDS 35.0%
GTTCTTATACTTGGACTTCT+GGG + chr5_4:12626971-12626990 Msa0838240:CDS 35.0%
TGATCAGAAAAACCAGAACT+TGG - chr5_4:12627378-12627397 None:intergenic 35.0%
!! GTGCTGTTTAAGATTCAAGT+TGG + chr5_4:12627563-12627582 Msa0838240:intron 35.0%
GATGTAATTGTACTTGATGG+TGG + chr5_4:12627626-12627645 Msa0838240:intron 35.0%
!! TAATTGTACTTGATGGTGGT+AGG + chr5_4:12627630-12627649 Msa0838240:intron 35.0%
ATGGTGGTAGGTAAAATGTA+CGG + chr5_4:12627642-12627661 Msa0838240:intron 35.0%
GTAGGTAAAATGTACGGAAA+TGG + chr5_4:12627648-12627667 Msa0838240:intron 35.0%
GTAAAATGTACGGAAATGGA+TGG + chr5_4:12627652-12627671 Msa0838240:CDS 35.0%
GAATTTGAGTCCATCAATGT+GGG + chr5_4:12627674-12627693 Msa0838240:CDS 35.0%
TCTTCAAGTCCTAAACTGAA+TGG + chr5_4:12627705-12627724 Msa0838240:CDS 35.0%
! AGTCCTAAACTGAATGGATT+TGG + chr5_4:12627711-12627730 Msa0838240:CDS 35.0%
TTGCCAAATCCATTCAGTTT+AGG - chr5_4:12627717-12627736 None:intergenic 35.0%
!!! AGGTTTCTGTTGGTAGTTTT+AGG + chr5_4:12627748-12627767 Msa0838240:CDS 35.0%
!!! GGTTTCTGTTGGTAGTTTTA+GGG + chr5_4:12627749-12627768 Msa0838240:CDS 35.0%
!!! GGTAGTTTTAGGGCTAATAA+TGG + chr5_4:12627759-12627778 Msa0838240:CDS 35.0%
! TTTAGGGCTAATAATGGTGT+TGG + chr5_4:12627765-12627784 Msa0838240:CDS 35.0%
! GCTAATAATGGTGTTGGAAA+TGG + chr5_4:12627771-12627790 Msa0838240:CDS 35.0%
! AATAATGGTGTTGGAAATGG+TGG + chr5_4:12627774-12627793 Msa0838240:CDS 35.0%
!!! GTTGAATGTGTGCTTTTTCA+AGG - chr5_4:12627890-12627909 None:intergenic 35.0%
AAATTGCACAGCAACCAAAT+CGG + chr5_4:12627955-12627974 Msa0838240:intron 35.0%
! AAGGTCGTTTAAAACCGATT+TGG - chr5_4:12627972-12627991 None:intergenic 35.0%
!! GAAGAAGGTTTTGTCTTTTG+TGG + chr5_4:12628191-12628210 Msa0838240:intron 35.0%
CATAGTTATCCACAGAATGT+TGG - chr5_4:12628263-12628282 None:intergenic 35.0%
CAACATTCTGTGGATAACTA+TGG + chr5_4:12628261-12628280 Msa0838240:intron 35.0%
AGAAGAAGGTAGAATTGGTA+AGG + chr5_4:12628490-12628509 Msa0838240:CDS 35.0%
TAAGGAAGTTAGAGATGAGA+AGG + chr5_4:12628508-12628527 Msa0838240:CDS 35.0%
AAGGAAGTTAGAGATGAGAA+GGG + chr5_4:12628509-12628528 Msa0838240:CDS 35.0%
AGAAAAGGCAAAGAAAGAAG+TGG + chr5_4:12628548-12628567 Msa0838240:CDS 35.0%
CCGCTGAAATCGTTAAATTA+AGG + chr5_4:12628622-12628641 Msa0838240:CDS 35.0%
! AGCATCTCAATAAGCGTTTT+TGG + chr5_4:12628838-12628857 Msa0838240:intron 35.0%
ACAATCACCAAGGTTAAGAT+AGG - chr5_4:12628866-12628885 None:intergenic 35.0%
! CTGACCTGTTAATTTGAGAT+TGG + chr5_4:12629008-12629027 Msa0838240:intron 35.0%
! CCTGTTAATTTGAGATTGGA+CGG + chr5_4:12629012-12629031 Msa0838240:intron 35.0%
AGAGAATCAAGTACTAGAAC+TGG + chr5_4:12629179-12629198 Msa0838240:intron 35.0%
!! GTCTGTTTCTCACTTGTTTT+TGG + chr5_4:12629285-12629304 Msa0838240:intron 35.0%
TTGTGTAACAATAGATGGGA+TGG + chr5_4:12629483-12629502 Msa0838240:intron 35.0%
TGTGTAACAATAGATGGGAT+GGG + chr5_4:12629484-12629503 Msa0838240:intron 35.0%
CGATTAAGTTCCCAAAGTAA+TGG - chr5_4:12629581-12629600 None:intergenic 35.0%
AATAAAGTGGTACCTTGTTG+TGG + chr5_4:12629632-12629651 Msa0838240:intron 35.0%
CGGAGAATCATTCAGTAAAA+TGG - chr5_4:12629707-12629726 None:intergenic 35.0%
! TGTAGGGTTATTTGATGGTA+TGG - chr5_4:12630172-12630191 None:intergenic 35.0%
TCAGATGTAGGGTTATTTGA+TGG - chr5_4:12630177-12630196 None:intergenic 35.0%
! ACCCTACATCTGAAATTCAT+AGG + chr5_4:12630184-12630203 Msa0838240:CDS 35.0%
GCCTATGAATTTCAGATGTA+GGG - chr5_4:12630188-12630207 None:intergenic 35.0%
TGCCTATGAATTTCAGATGT+AGG - chr5_4:12630189-12630208 None:intergenic 35.0%
TTGTTCTACTAAGAGGGTTT+CGG - chr5_4:12630338-12630357 None:intergenic 35.0%
TTTGTCTGGTATATGCTCAA+CGG - chr5_4:12630406-12630425 None:intergenic 35.0%
AGAGAAGATCAAGCATGAAA+AGG + chr5_4:12630683-12630702 Msa0838240:CDS 35.0%
!! GTTGTCCTCAAGTTTTTCAA+GGG + chr5_4:12630751-12630770 Msa0838240:CDS 35.0%
ACAATCCCTTGAAAAACTTG+AGG - chr5_4:12630759-12630778 None:intergenic 35.0%
!!! CAAGTTTTTCAAGGGATTGT+AGG + chr5_4:12630759-12630778 Msa0838240:CDS 35.0%
! GATCCATGTCAATTTTCCTA+AGG - chr5_4:12630873-12630892 None:intergenic 35.0%
ATTGCAATCTACCGATCATA+AGG - chr5_4:12630922-12630941 None:intergenic 35.0%
ACAATCTATCCATGAAGCAT+TGG - chr5_4:12631068-12631087 None:intergenic 35.0%
ACTCAGTGAGGAATAACAAA+AGG - chr5_4:12631189-12631208 None:intergenic 35.0%
! TTTGGGTTATGTCTGTGTAG+TGG - chr5_4:12626325-12626344 None:intergenic 40.0%
TCTTCATCAACAAGGCTATG+TGG - chr5_4:12626374-12626393 None:intergenic 40.0%
CAGAAATGAAGATGGGTAGA+GGG - chr5_4:12626574-12626593 None:intergenic 40.0%
TCAGAAATGAAGATGGGTAG+AGG - chr5_4:12626575-12626594 None:intergenic 40.0%
ATTCGTTCTCTTCGTTCAAC+TGG + chr5_4:12626796-12626815 Msa0838240:CDS 40.0%
! AAGATGGTGGTTAAGATGAG+TGG - chr5_4:12626857-12626876 None:intergenic 40.0%
GAACTCAAACTAGGACTCAT+CGG - chr5_4:12626955-12626974 None:intergenic 40.0%
! TTTCATCCGGTTGGGATTTT+TGG + chr5_4:12627058-12627077 Msa0838240:CDS 40.0%
! TTCATCCGGTTGGGATTTTT+GGG + chr5_4:12627059-12627078 Msa0838240:CDS 40.0%
TTTCTTAAAGCTGCTGATGC+TGG + chr5_4:12627324-12627343 Msa0838240:CDS 40.0%
CTGTTACAAGTTCCAAGTTC+TGG + chr5_4:12627363-12627382 Msa0838240:CDS 40.0%
GGAATTTGAGTCCATCAATG+TGG + chr5_4:12627673-12627692 Msa0838240:CDS 40.0%
TTTGGAGAGGCTATATGCAT+GGG + chr5_4:12627809-12627828 Msa0838240:CDS 40.0%
GGAGAAGAAATTGTACCAAG+AGG + chr5_4:12627830-12627849 Msa0838240:CDS 40.0%
GAAATTGTACCAAGAGGTCA+AGG + chr5_4:12627836-12627855 Msa0838240:CDS 40.0%
!!! GTGTGCTTTTTCAAGGCATA+GGG - chr5_4:12627883-12627902 None:intergenic 40.0%
!!! TGTGTGCTTTTTCAAGGCAT+AGG - chr5_4:12627884-12627903 None:intergenic 40.0%
CATTCAACGAAAAGCAATCC+TGG + chr5_4:12627902-12627921 Msa0838240:intron 40.0%
GCTGTTCGATCTCAGTTTAA+CGG - chr5_4:12627933-12627952 None:intergenic 40.0%
TTGTGGGCATAAACATGATG+TGG + chr5_4:12628208-12628227 Msa0838240:intron 40.0%
TGTGGGCATAAACATGATGT+GGG + chr5_4:12628209-12628228 Msa0838240:intron 40.0%
TCTATGCAACCAACATTCTG+TGG + chr5_4:12628251-12628270 Msa0838240:intron 40.0%
AAAGATGGAGCATGAGAAGA+AGG + chr5_4:12628476-12628495 Msa0838240:CDS 40.0%
GCATGAGAAGAAGGTAGAAT+TGG + chr5_4:12628485-12628504 Msa0838240:CDS 40.0%
TTCAGCGGATGTACTATCAA+TGG - chr5_4:12628610-12628629 None:intergenic 40.0%
! TTTGGAGCCTATCTTAACCT+TGG + chr5_4:12628856-12628875 Msa0838240:intron 40.0%
AAGGAAAAGTTAAGGCGAGA+TGG - chr5_4:12628903-12628922 None:intergenic 40.0%
CCGTCCAATCTCAAATTAAC+AGG - chr5_4:12629015-12629034 None:intergenic 40.0%
CATGCTTCAAGACAGATTCT+TGG - chr5_4:12629069-12629088 None:intergenic 40.0%
CAAGAATCTGTCTTGAAGCA+TGG + chr5_4:12629067-12629086 Msa0838240:intron 40.0%
!! AGCATGGACTGCATTTTGTT+TGG + chr5_4:12629083-12629102 Msa0838240:intron 40.0%
TTGTTTGGTTGTGATCCCTT+TGG + chr5_4:12629098-12629117 Msa0838240:intron 40.0%
AGACAAGCAATGACTCCAAA+GGG - chr5_4:12629116-12629135 None:intergenic 40.0%
TAGACAAGCAATGACTCCAA+AGG - chr5_4:12629117-12629136 None:intergenic 40.0%
! TTTGGAGTCATTGCTTGTCT+AGG + chr5_4:12629116-12629135 Msa0838240:intron 40.0%
TTGGAGTCATTGCTTGTCTA+GGG + chr5_4:12629117-12629136 Msa0838240:intron 40.0%
CCAAGAACAAGAAAAAGGGT+TGG - chr5_4:12629402-12629421 None:intergenic 40.0%
! CCAACCCTTTTTCTTGTTCT+TGG + chr5_4:12629399-12629418 Msa0838240:intron 40.0%
CAAATTACCTGTCCACAACA+AGG - chr5_4:12629647-12629666 None:intergenic 40.0%
TCATCCATGAATAATCCAGC+AGG - chr5_4:12629791-12629810 None:intergenic 40.0%
! GCATTTTGAGCTTCTTGTGT+TGG + chr5_4:12630063-12630082 Msa0838240:intron 40.0%
GGATTCAATATAGTCCCTGT+GGG - chr5_4:12630277-12630296 None:intergenic 40.0%
GACTATATTGAATCCCTCAG+TGG + chr5_4:12630282-12630301 Msa0838240:CDS 40.0%
ATATTGAATCCCTCAGTGGT+TGG + chr5_4:12630286-12630305 Msa0838240:CDS 40.0%
GGTTTCGGCTAAATTGGTAA+AGG - chr5_4:12630323-12630342 None:intergenic 40.0%
TAAGAGGGTTTCGGCTAAAT+TGG - chr5_4:12630329-12630348 None:intergenic 40.0%
CCTCAGTTGTTCTACTAAGA+GGG - chr5_4:12630344-12630363 None:intergenic 40.0%
TCCTCAGTTGTTCTACTAAG+AGG - chr5_4:12630345-12630364 None:intergenic 40.0%
TGCGATTGTAGTTCAACAGA+CGG + chr5_4:12630467-12630486 Msa0838240:CDS 40.0%
!! AGATCTTTGGAGTGCAAGTA+TGG + chr5_4:12630558-12630577 Msa0838240:CDS 40.0%
AAAAGGCAGTGAGTGTTACA+AGG + chr5_4:12630700-12630719 Msa0838240:CDS 40.0%
! GGTTGTCCTCAAGTTTTTCA+AGG + chr5_4:12630750-12630769 Msa0838240:CDS 40.0%
! TCACCCTTTTGCCTTATGAT+CGG + chr5_4:12630908-12630927 Msa0838240:three_prime_UTR 40.0%
CTACCGATCATAAGGCAAAA+GGG - chr5_4:12630914-12630933 None:intergenic 40.0%
TCTACCGATCATAAGGCAAA+AGG - chr5_4:12630915-12630934 None:intergenic 40.0%
!! TATACTTGGACTTCTGGGAC+TGG + chr5_4:12626976-12626995 Msa0838240:CDS 45.0%
AGGATCCCAAAAATCCCAAC+CGG - chr5_4:12627067-12627086 None:intergenic 45.0%
GTCAGGAAGTGAACTTGCAA+TGG + chr5_4:12627245-12627264 Msa0838240:CDS 45.0%
AGGAAGTGAACTTGCAATGG+TGG + chr5_4:12627248-12627267 Msa0838240:CDS 45.0%
ATTTGGCAAGCTGTCTCAAG+AGG + chr5_4:12627728-12627747 Msa0838240:CDS 45.0%
CTGTCTCAAGAGGTTTCTGT+TGG + chr5_4:12627738-12627757 Msa0838240:CDS 45.0%
! TGGTGGACATTGCTCTACTT+TGG + chr5_4:12627791-12627810 Msa0838240:CDS 45.0%
! GACATTGCTCTACTTTGGAG+AGG + chr5_4:12627796-12627815 Msa0838240:CDS 45.0%
! CTTTGGAGAGGCTATATGCA+TGG + chr5_4:12627808-12627827 Msa0838240:CDS 45.0%
TTCGATCTCAGTTTAACGGC+CGG - chr5_4:12627929-12627948 None:intergenic 45.0%
ACATGATGTGGGTCTAGTGA+AGG + chr5_4:12628220-12628239 Msa0838240:intron 45.0%
TGGAGTCATTGCTTGTCTAG+GGG + chr5_4:12629118-12629137 Msa0838240:intron 45.0%
GTTACGAGGTTCATGCATGA+TGG + chr5_4:12629509-12629528 Msa0838240:intron 45.0%
TCTGCCTGCTGGATTATTCA+TGG + chr5_4:12629784-12629803 Msa0838240:intron 45.0%
! TTTGAGCTTCTTGTGTTGGC+AGG + chr5_4:12630067-12630086 Msa0838240:intron 45.0%
GAAGCACATAGTTCAGCAAC+TGG + chr5_4:12630134-12630153 Msa0838240:CDS 45.0%
TAGGCAATCAACACTTCAGC+TGG + chr5_4:12630203-12630222 Msa0838240:CDS 45.0%
TGGAGCTTGAAGTACAGCAA+TGG + chr5_4:12630223-12630242 Msa0838240:CDS 45.0%
TGAAGAGGTTGCAGAAGGAT+TGG - chr5_4:12630251-12630270 None:intergenic 45.0%
ATCCTTCTGCAACCTCTTCA+AGG + chr5_4:12630251-12630270 Msa0838240:CDS 45.0%
GGGATTCAATATAGTCCCTG+TGG - chr5_4:12630278-12630297 None:intergenic 45.0%
CCCTCTTAGTAGAACAACTG+AGG + chr5_4:12630341-12630360 Msa0838240:CDS 45.0%
TATTCACCCTCTGCGAACAA+TGG + chr5_4:12630373-12630392 Msa0838240:CDS 45.0%
!! CCTTCAGATGCTACTTTGTC+TGG - chr5_4:12630420-12630439 None:intergenic 45.0%
CCAGACAAAGTAGCATCTGA+AGG + chr5_4:12630417-12630436 Msa0838240:CDS 45.0%
GATTGTAGTTCAACAGACGG+AGG + chr5_4:12630470-12630489 Msa0838240:CDS 45.0%
GAAGTCAGAGTATGCGTTCA+AGG + chr5_4:12630509-12630528 Msa0838240:CDS 45.0%
GTTCAAGGAGTTCGAGAAGA+AGG + chr5_4:12630524-12630543 Msa0838240:CDS 45.0%
GGTGGTTCAGCTTAGATCTT+TGG + chr5_4:12630545-12630564 Msa0838240:CDS 45.0%
! TGGTTCTGTGAGAAGAACGA+AGG + chr5_4:12630605-12630624 Msa0838240:CDS 45.0%
!!! AGGGTTTTCAAGTGTGTGCA+TGG + chr5_4:12630779-12630798 Msa0838240:CDS 45.0%
!!! GTTTTCAAGTGTGTGCATGG+AGG + chr5_4:12630782-12630801 Msa0838240:CDS 45.0%
GGTAGATTGCAATGTAGCAC+TGG + chr5_4:12630929-12630948 Msa0838240:three_prime_UTR 45.0%
!! TGTGGGTGTTGAGTCATTGT+CGG - chr5_4:12630968-12630987 None:intergenic 45.0%
ACATGGACACAACACTCACA+TGG - chr5_4:12631040-12631059 None:intergenic 45.0%
!! CTATCCATGAAGCATTGGCA+CGG - chr5_4:12631063-12631082 None:intergenic 45.0%
!! AGTAGGGTTGTAGGAGTATC+AGG - chr5_4:12631131-12631150 None:intergenic 45.0%
CATTCACCTCCATTGCAGTA+GGG - chr5_4:12631147-12631166 None:intergenic 45.0%
ACGGAATGTATGACTCAGTG+AGG - chr5_4:12631201-12631220 None:intergenic 45.0%
GTCATACATTCCGTGAAACG+CGG + chr5_4:12631207-12631226 Msa0838240:three_prime_UTR 45.0%
CAGAAGCTGTGAACTTTCCT+AGG + chr5_4:12631281-12631300 Msa0838240:three_prime_UTR 45.0%
ATGGGTAGAGGGTAGTGTAG+TGG - chr5_4:12626563-12626582 None:intergenic 50.0%
AAACTAGGACTCATCGGAGG+TGG - chr5_4:12626949-12626968 None:intergenic 50.0%
CTCAAACTAGGACTCATCGG+AGG - chr5_4:12626952-12626971 None:intergenic 50.0%
TCCCAACCGGATGAAATCAC+CGG - chr5_4:12627054-12627073 None:intergenic 50.0%
TGGGAAGCTACTACTACCAC+TGG + chr5_4:12627141-12627160 Msa0838240:CDS 50.0%
!! TACTACTACCACTGGCTCTG+AGG + chr5_4:12627149-12627168 Msa0838240:CDS 50.0%
! TGGTGTGGTGGGGTATTCTA+AGG + chr5_4:12627221-12627240 Msa0838240:CDS 50.0%
! GTGGGGTATTCTAAGGAGTC+AGG + chr5_4:12627228-12627247 Msa0838240:CDS 50.0%
TGAGTCCATCAATGTGGGCT+TGG + chr5_4:12627679-12627698 Msa0838240:CDS 50.0%
GAGTCCATCAATGTGGGCTT+GGG + chr5_4:12627680-12627699 Msa0838240:CDS 50.0%
AGTCCATCAATGTGGGCTTG+GGG + chr5_4:12627681-12627700 Msa0838240:CDS 50.0%
AGCTACTCACCTTGACCTCT+TGG - chr5_4:12627848-12627867 None:intergenic 50.0%
AACGAAAAGCAATCCTGGCC+CGG + chr5_4:12627907-12627926 Msa0838240:intron 50.0%
TCGATCTCAGTTTAACGGCC+GGG - chr5_4:12627928-12627947 None:intergenic 50.0%
AGTTAAGGCGAGATGGCTCT+CGG - chr5_4:12628896-12628915 None:intergenic 50.0%
TCATTGCTTGTCTAGGGGAG+TGG + chr5_4:12629123-12629142 Msa0838240:intron 50.0%
AGATGGGATGGGATGTTACG+AGG + chr5_4:12629495-12629514 Msa0838240:intron 50.0%
! AGTGGTACCTTGTTGTGGAC+AGG + chr5_4:12629637-12629656 Msa0838240:intron 50.0%
CTAGCACAATTTCTGCCTGC+TGG + chr5_4:12629773-12629792 Msa0838240:intron 50.0%
!! TTGGCAGGTTGATGTGCATG+TGG + chr5_4:12630082-12630101 Msa0838240:intron 50.0%
! AATCCCTCAGTGGTTGGCTA+AGG + chr5_4:12630292-12630311 Msa0838240:CDS 50.0%
!! AAGGTGCCATTGTTCGCAGA+GGG - chr5_4:12630382-12630401 None:intergenic 50.0%
CTGGTATATGCTCAACGGCA+AGG - chr5_4:12630401-12630420 None:intergenic 50.0%
CAAGGAGTTCGAGAAGAAGG+TGG + chr5_4:12630527-12630546 Msa0838240:CDS 50.0%
GTATGGTCCGTACTCCATGT+CGG + chr5_4:12630575-12630594 Msa0838240:CDS 50.0%
GATCGTTCCGACATGGAGTA+CGG - chr5_4:12630585-12630604 None:intergenic 50.0%
TACTCCATGTCGGAACGATC+TGG + chr5_4:12630585-12630604 Msa0838240:CDS 50.0%
AGAACCAGATCGTTCCGACA+TGG - chr5_4:12630592-12630611 None:intergenic 50.0%
GGTGGAAGCTTTCAGAGCAA+AGG + chr5_4:12630653-12630672 Msa0838240:CDS 50.0%
CAAAGCCAAAGTTGCCGAAC+AGG + chr5_4:12630824-12630843 Msa0838240:CDS 50.0%
CTTCACATCACGCTCCTGTT+CGG - chr5_4:12630841-12630860 None:intergenic 50.0%
CACAACACTCACATGGACAC+CGG - chr5_4:12631033-12631052 None:intergenic 50.0%
!! ATGAAGCATTGGCACGGACA+TGG - chr5_4:12631057-12631076 None:intergenic 50.0%
ATGTCCGTGCCAATGCTTCA+TGG + chr5_4:12631056-12631075 Msa0838240:three_prime_UTR 50.0%
CTCCTACAACCCTACTGCAA+TGG + chr5_4:12631135-12631154 Msa0838240:three_prime_UTR 50.0%
CTCCATTGCAGTAGGGTTGT+AGG - chr5_4:12631140-12631159 None:intergenic 50.0%
CTACAACCCTACTGCAATGG+AGG + chr5_4:12631138-12631157 Msa0838240:three_prime_UTR 50.0%
CCATTCACCTCCATTGCAGT+AGG - chr5_4:12631148-12631167 None:intergenic 50.0%
CCTACTGCAATGGAGGTGAA+TGG + chr5_4:12631145-12631164 Msa0838240:three_prime_UTR 50.0%
TTCCGTGAAACGCGGTAGTA+TGG + chr5_4:12631215-12631234 Msa0838240:three_prime_UTR 50.0%
AGCCATACTACCGCGTTTCA+CGG - chr5_4:12631220-12631239 None:intergenic 50.0%
CTGTGAACTTTCCTAGGCGT+GGG + chr5_4:12631287-12631306 Msa0838240:three_prime_UTR 50.0%
GTTGTGGCTCAGGTGGAAGA+TGG - chr5_4:12626873-12626892 None:intergenic 55.0%
!! AGAATGGGTTGTGGCTCAGG+TGG - chr5_4:12626880-12626899 None:intergenic 55.0%
!! GGAAGAATGGGTTGTGGCTC+AGG - chr5_4:12626883-12626902 None:intergenic 55.0%
!! GGAGGTGGAAGAATGGGTTG+TGG - chr5_4:12626889-12626908 None:intergenic 55.0%
CAACCGGATGAAATCACCGG+CGG - chr5_4:12627051-12627070 None:intergenic 55.0%
GCCGGTGATTTCATCCGGTT+GGG + chr5_4:12627050-12627069 Msa0838240:CDS 55.0%
GGTGGAGGTTGCTGCATGAA+AGG - chr5_4:12627087-12627106 None:intergenic 55.0%
!! TACTACCACTGGCTCTGAGG+TGG + chr5_4:12627152-12627171 Msa0838240:CDS 55.0%
!! TGGCTCTGAGGTGGTTGTGA+TGG + chr5_4:12627161-12627180 Msa0838240:CDS 55.0%
! TCTGAGGTGGTTGTGATGGC+TGG + chr5_4:12627165-12627184 Msa0838240:CDS 55.0%
GAACCCCAAGCCCACATTGA+TGG - chr5_4:12627687-12627706 None:intergenic 55.0%
CGGAGGCTCAACAATCACCA+AGG - chr5_4:12628876-12628895 None:intergenic 55.0%
GGCCTTGAAGAGGTTGCAGA+AGG - chr5_4:12630256-12630275 None:intergenic 55.0%
CAACCTCTTCAAGGCCCACA+GGG + chr5_4:12630260-12630279 Msa0838240:CDS 55.0%
GAGCCTTAGCCAACCACTGA+GGG - chr5_4:12630298-12630317 None:intergenic 55.0%
TGAGCCTTAGCCAACCACTG+AGG - chr5_4:12630299-12630318 None:intergenic 55.0%
!! CAAGGTGCCATTGTTCGCAG+AGG - chr5_4:12630383-12630402 None:intergenic 55.0%
AAGAACGAAGGACCCTGTCG+TGG + chr5_4:12630617-12630636 Msa0838240:CDS 55.0%
TAGCTCGCTTCTCCACGACA+GGG - chr5_4:12630632-12630651 None:intergenic 55.0%
TTAGCTCGCTTCTCCACGAC+AGG - chr5_4:12630633-12630652 None:intergenic 55.0%
TGTCGTGGAGAAGCGAGCTA+AGG + chr5_4:12630632-12630651 Msa0838240:CDS 55.0%
ACGCTCCTGTTCGGCAACTT+TGG - chr5_4:12630832-12630851 None:intergenic 55.0%
GCTGTGAACTTTCCTAGGCG+TGG + chr5_4:12631286-12631305 Msa0838240:three_prime_UTR 55.0%
GTGGCTCAGGTGGAAGATGG+TGG - chr5_4:12626870-12626889 None:intergenic 60.0%
CTAGGACTCATCGGAGGTGG+TGG - chr5_4:12626946-12626965 None:intergenic 60.0%
GATGAAATCACCGGCGGTGG+AGG - chr5_4:12627045-12627064 None:intergenic 60.0%
CCACCGCCGGTGATTTCATC+CGG + chr5_4:12627045-12627064 Msa0838240:CDS 60.0%
CGCCGGTGATTTCATCCGGT+TGG + chr5_4:12627049-12627068 Msa0838240:CDS 60.0%
GTCTGCGACGGAGGAAGAGT+GGG + chr5_4:12627122-12627141 Msa0838240:CDS 60.0%
CACAACCACCTCAGAGCCAG+TGG - chr5_4:12627160-12627179 None:intergenic 60.0%
GAGGTGGTTGTGATGGCTGG+TGG + chr5_4:12627168-12627187 Msa0838240:CDS 60.0%
! GGTTGTGATGGCTGGTGGTG+CGG + chr5_4:12627173-12627192 Msa0838240:CDS 60.0%
AGTATGGCTACTCCGGCGAG+TGG + chr5_4:12627201-12627220 Msa0838240:CDS 60.0%
TAAGGCGAGATGGCTCTCGG+AGG - chr5_4:12628893-12628912 None:intergenic 60.0%
GCAACCTCTTCAAGGCCCAC+AGG + chr5_4:12630259-12630278 Msa0838240:CDS 60.0%
AGTCCCTGTGGGCCTTGAAG+AGG - chr5_4:12630266-12630285 None:intergenic 60.0%
CGTGGAGAAGCGAGCTAAGG+TGG + chr5_4:12630635-12630654 Msa0838240:CDS 60.0%
GGCGGCGGAGGTGGAAGAAT+GGG - chr5_4:12626895-12626914 None:intergenic 65.0%
!! CTCATCGGAGGTGGTGGTGG+CGG - chr5_4:12626940-12626959 None:intergenic 65.0%
! GGACTCATCGGAGGTGGTGG+TGG - chr5_4:12626943-12626962 None:intergenic 65.0%
GAAATCACCGGCGGTGGAGG+TGG - chr5_4:12627042-12627061 None:intergenic 65.0%
CCGGATGAAATCACCGGCGG+TGG - chr5_4:12627048-12627067 None:intergenic 65.0%
CTCCACCACCTCCTTCGTCG+CGG + chr5_4:12627100-12627119 Msa0838240:CDS 65.0%
TCCTTCGTCGCGGTCTGCGA+CGG + chr5_4:12627110-12627129 Msa0838240:CDS 65.0%
GGTCTGCGACGGAGGAAGAG+TGG + chr5_4:12627121-12627140 Msa0838240:CDS 65.0%
! TGTGATGGCTGGTGGTGCGG+CGG + chr5_4:12627176-12627195 Msa0838240:CDS 65.0%
GGCGGCGAGTATGGCTACTC+CGG + chr5_4:12627194-12627213 Msa0838240:CDS 65.0%
TACTCCGGCGAGTGGTGTGG+TGG + chr5_4:12627209-12627228 Msa0838240:CDS 65.0%
ACTCCGGCGAGTGGTGTGGT+GGG + chr5_4:12627210-12627229 Msa0838240:CDS 65.0%
TACCCCACCACACCACTCGC+CGG - chr5_4:12627216-12627235 None:intergenic 65.0%
CTCAGTTTAACGGCCGGGCC+AGG - chr5_4:12627923-12627942 None:intergenic 65.0%
CGGCGGCGGAGGTGGAAGAA+TGG - chr5_4:12626896-12626915 None:intergenic 70.0%
ATTGGCGACGGAGCACGCGG+CGG - chr5_4:12626913-12626932 None:intergenic 70.0%
!! GGCATTGGCGACGGAGCACG+CGG - chr5_4:12626916-12626935 None:intergenic 70.0%
!! ATCGGAGGTGGTGGTGGCGG+CGG - chr5_4:12626937-12626956 None:intergenic 70.0%
ATCACCGGCGGTGGAGGTGG+CGG - chr5_4:12627039-12627058 None:intergenic 70.0%
! CGCGACGAAGGAGGTGGTGG+AGG - chr5_4:12627102-12627121 None:intergenic 70.0%
GACCGCGACGAAGGAGGTGG+TGG - chr5_4:12627105-12627124 None:intergenic 70.0%
GCAGACCGCGACGAAGGAGG+TGG - chr5_4:12627108-12627127 None:intergenic 70.0%
GTCGCAGACCGCGACGAAGG+AGG - chr5_4:12627111-12627130 None:intergenic 70.0%
TCCGTCGCAGACCGCGACGA+AGG - chr5_4:12627114-12627133 None:intergenic 70.0%
TTCGTCGCGGTCTGCGACGG+AGG + chr5_4:12627113-12627132 Msa0838240:CDS 70.0%
! TGGTGGTGCGGCGGCGAGTA+TGG + chr5_4:12627185-12627204 Msa0838240:CDS 70.0%
GGCTACTCCGGCGAGTGGTG+TGG + chr5_4:12627206-12627225 Msa0838240:CDS 70.0%
CTCCGGCGAGTGGTGTGGTG+GGG + chr5_4:12627211-12627230 Msa0838240:CDS 70.0%
!! GGTGGCGGCGGCATTGGCGA+CGG - chr5_4:12626925-12626944 None:intergenic 75.0%
!! GGTGGTGGTGGCGGCGGCAT+TGG - chr5_4:12626931-12626950 None:intergenic 75.0%
!! GGTGGCGGCGGTGGAGGAGG+CGG - chr5_4:12627024-12627043 None:intergenic 80.0%
!! GGAGGTGGCGGCGGTGGAGG+AGG - chr5_4:12627027-12627046 None:intergenic 80.0%
!! GGTGGAGGTGGCGGCGGTGG+AGG - chr5_4:12627030-12627049 None:intergenic 80.0%
! ACCGCCGCCACCTCCACCGC+CGG + chr5_4:12627032-12627051 Msa0838240:CDS 80.0%
!! ACCGGCGGTGGAGGTGGCGG+CGG - chr5_4:12627036-12627055 None:intergenic 80.0%
! GGAGCACGCGGCGGCGGAGG+TGG - chr5_4:12626904-12626923 None:intergenic 85.0%
! GACGGAGCACGCGGCGGCGG+AGG - chr5_4:12626907-12626926 None:intergenic 85.0%
! GGCGACGGAGCACGCGGCGG+CGG - chr5_4:12626910-12626929 None:intergenic 85.0%
! GGCGGCGGTGGAGGAGGCGG+AGG - chr5_4:12627021-12627040 None:intergenic 85.0%
!! GGCGGTGGAGGTGGCGGCGG+TGG - chr5_4:12627033-12627052 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 12626322 12631316 12626322 ID=Msa0838240;Name=Msa0838240
chr5_4 mRNA 12626322 12631316 12626322 ID=Msa0838240-mRNA-1;Parent=Msa0838240;Name=Msa0838240-mRNA-1;_AED=0.04;_eAED=0.04;_QI=351|1|1|1|1|1|4|441|650
chr5_4 exon 12626322 12627408 12626322 ID=Msa0838240-mRNA-1:exon:5524;Parent=Msa0838240-mRNA-1
chr5_4 exon 12627652 12627857 12627652 ID=Msa0838240-mRNA-1:exon:5525;Parent=Msa0838240-mRNA-1
chr5_4 exon 12628462 12628685 12628462 ID=Msa0838240-mRNA-1:exon:5526;Parent=Msa0838240-mRNA-1
chr5_4 exon 12630089 12631316 12630089 ID=Msa0838240-mRNA-1:exon:5527;Parent=Msa0838240-mRNA-1
chr5_4 five_prime_UTR 12626322 12626672 12626322 ID=Msa0838240-mRNA-1:five_prime_utr;Parent=Msa0838240-mRNA-1
chr5_4 CDS 12626673 12627408 12626673 ID=Msa0838240-mRNA-1:cds;Parent=Msa0838240-mRNA-1
chr5_4 CDS 12627652 12627857 12627652 ID=Msa0838240-mRNA-1:cds;Parent=Msa0838240-mRNA-1
chr5_4 CDS 12628462 12628685 12628462 ID=Msa0838240-mRNA-1:cds;Parent=Msa0838240-mRNA-1
chr5_4 CDS 12630089 12630875 12630089 ID=Msa0838240-mRNA-1:cds;Parent=Msa0838240-mRNA-1
chr5_4 three_prime_UTR 12630876 12631316 12630876 ID=Msa0838240-mRNA-1:three_prime_utr;Parent=Msa0838240-mRNA-1
Gene Sequence

>Msa0838240

ATGGGTTGTTGCTATTCAAGAGTAGAAAGAGAAGAAACTGTTTCACATTGCAAATCAAGAAAACGTTACATGAAACAGTTGGTTGAAGCAAGACATGCTTTTTCAGCTTCACATGTTATGTACATTCGTTCTCTTCGTTCAACTGGTTCAGCTTTGTTTCACTTTGCTAACGCTGAAAAAACCACTCATCTTAACCACCATCTTCCACCTGAGCCACAACCCATTCTTCCACCTCCGCCGCCGCGTGCTCCGTCGCCAATGCCGCCGCCACCACCACCTCCGATGAGTCCTAGTTTGAGTTCTTATACTTGGACTTCTGGGACTGGTTCACAATCATCTGCACTTCCTCCGCCTCCTCCACCGCCGCCACCTCCACCGCCGGTGATTTCATCCGGTTGGGATTTTTGGGATCCTTTCATGCAGCAACCTCCACCACCTCCTTCGTCGCGGTCTGCGACGGAGGAAGAGTGGGAAGCTACTACTACCACTGGCTCTGAGGTGGTTGTGATGGCTGGTGGTGCGGCGGCGAGTATGGCTACTCCGGCGAGTGGTGTGGTGGGGTATTCTAAGGAGTCAGGAAGTGAACTTGCAATGGTGGTTTCAAGAAACAGTAAAGATCTGGTTGAAGTTATTAAGGAGCTTGATGATTATTTTCTTAAAGCTGCTGATGCTGGTTCTCATGTTTCATATCTGTTACAAGTTCCAAGTTCTGGTTTTTCTGATCATAGTAAAGCAAGTAAAATGTACGGAAATGGATGGAATTTGAGTCCATCAATGTGGGCTTGGGGTTCTTCAAGTCCTAAACTGAATGGATTTGGCAAGCTGTCTCAAGAGGTTTCTGTTGGTAGTTTTAGGGCTAATAATGGTGTTGGAAATGGTGGACATTGCTCTACTTTGGAGAGGCTATATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGAATGCTAAAACAATAAAGATGGAGCATGAGAAGAAGGTAGAATTGGTAAGGAAGTTAGAGATGAGAAGGGCTGATTATGTGAAGACAGAAAAGGCAAAGAAAGAAGTGGAGAAATTAGAATCACAAATGATGGTTGCTTCACAAACCATTGATAGTACATCCGCTGAAATCGTTAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAACTTGTTAAAGGGTTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTTCAGAAGCACATAGTTCAGCAACTGGAATACCTCAATACCATACCATCAAATAACCCTACATCTGAAATTCATAGGCAATCAACACTTCAGCTGGAGCTTGAAGTACAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCCCACAGGGACTATATTGAATCCCTCAGTGGTTGGCTAAGGCTCAGCCTTTACCAATTTAGCCGAAACCCTCTTAGTAGAACAACTGAGGAGTCGAAGATATTCACCCTCTGCGAACAATGGCACCTTGCCGTTGAGCATATACCAGACAAAGTAGCATCTGAAGGAATAAAAAGCTTGTTGACGGTTATTCATGCGATTGTAGTTCAACAGACGGAGGAGCATAAACAAAAGAAGAAGTCAGAGTATGCGTTCAAGGAGTTCGAGAAGAAGGTGGTTCAGCTTAGATCTTTGGAGTGCAAGTATGGTCCGTACTCCATGTCGGAACGATCTGGTTCTGTGAGAAGAACGAAGGACCCTGTCGTGGAGAAGCGAGCTAAGGTGGAAGCTTTCAGAGCAAAGGCTGAAGAAGAGAAGATCAAGCATGAAAAGGCAGTGAGTGTTACAAGGTCAATGACATTGAATAACTTGCAAATGGGTTGTCCTCAAGTTTTTCAAGGGATTGTAGGGTTTTCAAGTGTGTGCATGGAGGCTTTTGAATCTGTATACAACAAAGCCAAAGTTGCCGAACAGGAGCGTGATGTGAAGAGAATATTACCTTAG
Protein sequence

>Msa0838240

MGCCYSRVEREETVSHCKSRKRYMKQLVEARHAFSASHVMYIRSLRSTGSALFHFANAEKTTHLNHHLPPEPQPILPPPPPRAPSPMPPPPPPPMSPSLSSYTWTSGTGSQSSALPPPPPPPPPPPPVISSGWDFWDPFMQQPPPPPSSRSATEEEWEATTTTGSEVVVMAGGAAASMATPASGVVGYSKESGSELAMVVSRNSKDLVEVIKELDDYFLKAADAGSHVSYLLQVPSSGFSDHSKASKMYGNGWNLSPSMWAWGSSSPKLNGFGKLSQEVSVGSFRANNGVGNGGHCSTLERLYAWEKKLYQEVKNAKTIKMEHEKKVELVRKLEMRRADYVKTEKAKKEVEKLESQMMVASQTIDSTSAEIVKLREIELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIESLSGWLRLSLYQFSRNPLSRTTEESKIFTLCEQWHLAVEHIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKKSEYAFKEFEKKVVQLRSLECKYGPYSMSERSGSVRRTKDPVVEKRAKVEAFRAKAEEEKIKHEKAVSVTRSMTLNNLQMGCPQVFQGIVGFSSVCMEAFESVYNKAKVAEQERDVKRILP*