Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137710 | XP_013470199.1 | 68.990 | 416 | 90 | 11 | 1 | 404 | 1 | 389 | 7.28e-134 | 402 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137710 | sp|Q9SQI8|ODP24_ARATH | 54.286 | 315 | 126 | 6 | 7 | 310 | 16 | 323 | 4.87e-74 | 242 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137710 | A0A072VR15 | 68.990 | 416 | 90 | 11 | 1 | 404 | 1 | 389 | 3.48e-134 | 402 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028660 | Msa0137710 | -0.809891 | 1.512158e-50 | -8.615850e-47 |
| Msa0030150 | Msa0137710 | 0.805133 | 1.546394e-49 | -8.615850e-47 |
| Msa0042980 | Msa0137710 | 0.813793 | 2.138143e-51 | -8.615850e-47 |
| Msa0073460 | Msa0137710 | -0.803016 | 4.263571e-49 | -8.615850e-47 |
| Msa0083280 | Msa0137710 | -0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa0096030 | Msa0137710 | -0.806187 | 9.290240e-50 | -8.615850e-47 |
| Msa0124550 | Msa0137710 | -0.830339 | 3.105792e-55 | -8.615850e-47 |
| Msa0125640 | Msa0137710 | 0.826380 | 2.800348e-54 | -8.615850e-47 |
| Msa0137710 | Msa0170110 | 0.840427 | 8.754017e-58 | -8.615850e-47 |
| Msa0137710 | Msa0175540 | -0.815293 | 9.958553e-52 | -8.615850e-47 |
| Msa0137710 | Msa0178860 | 0.809908 | 1.499761e-50 | -8.615850e-47 |
| Msa0137710 | Msa0182790 | 0.814030 | 1.896018e-51 | -8.615850e-47 |
| Msa0137710 | Msa0217680 | -0.822618 | 2.151140e-53 | -8.615850e-47 |
| Msa0137710 | Msa0233610 | -0.804015 | 2.646198e-49 | -8.615850e-47 |
| Msa0137710 | Msa0257500 | -0.807930 | 3.972958e-50 | -8.615850e-47 |
| Msa0137710 | Msa0265380 | -0.816619 | 5.036412e-52 | -8.615850e-47 |
| Msa0137710 | Msa0272450 | -0.820424 | 6.909544e-53 | -8.615850e-47 |
| Msa0137710 | Msa0303360 | -0.812702 | 3.711124e-51 | -8.615850e-47 |
| Msa0137710 | Msa0306210 | 0.819070 | 1.408473e-52 | -8.615850e-47 |
| Msa0137710 | Msa0347610 | -0.806930 | 6.474690e-50 | -8.615850e-47 |
| Msa0137710 | Msa0366480 | 0.805989 | 1.022444e-49 | -8.615850e-47 |
| Msa0137710 | Msa0385490 | -0.805807 | 1.116937e-49 | -8.615850e-47 |
| Msa0137710 | Msa0389610 | 0.843565 | 1.295595e-58 | -8.615850e-47 |
| Msa0137710 | Msa0394340 | -0.833662 | 4.688063e-56 | -8.615850e-47 |
| Msa0137710 | Msa0412840 | -0.842408 | 2.633740e-58 | -8.615850e-47 |
| Msa0137710 | Msa0442200 | -0.831885 | 1.295067e-55 | -8.615850e-47 |
| Msa0137710 | Msa0457510 | -0.851499 | 8.530876e-61 | -8.615850e-47 |
| Msa0137710 | Msa0460400 | 0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa0137710 | Msa0468130 | -0.800106 | 1.684135e-48 | -8.615850e-47 |
| Msa0137710 | Msa0472960 | 0.833379 | 5.517118e-56 | -8.615850e-47 |
| Msa0137710 | Msa0473730 | 0.800311 | 1.529936e-48 | -8.615850e-47 |
| Msa0137710 | Msa0477080 | -0.833529 | 5.062050e-56 | -8.615850e-47 |
| Msa0137710 | Msa0477130 | 0.805589 | 1.241018e-49 | -8.615850e-47 |
| Msa0137710 | Msa0489610 | -0.832504 | 9.105782e-56 | -8.615850e-47 |
| Msa0137710 | Msa0493630 | -0.807319 | 5.355771e-50 | -8.615850e-47 |
| Msa0137710 | Msa0528020 | 0.824438 | 8.071544e-54 | -8.615850e-47 |
| Msa0137710 | Msa0528610 | 0.839786 | 1.286697e-57 | -8.615850e-47 |
| Msa0137710 | Msa0530650 | -0.815328 | 9.782671e-52 | -8.615850e-47 |
| Msa0137710 | Msa0544840 | -0.803078 | 4.139376e-49 | -8.615850e-47 |
| Msa0137710 | Msa0555200 | -0.824720 | 6.926659e-54 | -8.615850e-47 |
| Msa0137710 | Msa0578260 | -0.816787 | 4.619183e-52 | -8.615850e-47 |
| Msa0137710 | Msa0587190 | -0.829446 | 5.125479e-55 | -8.615850e-47 |
| Msa0137710 | Msa0608710 | -0.864608 | 1.075584e-64 | -8.615850e-47 |
| Msa0137710 | Msa0610130 | -0.809655 | 1.699680e-50 | -8.615850e-47 |
| Msa0137710 | Msa0626990 | -0.819447 | 1.155804e-52 | -8.615850e-47 |
| Msa0137710 | Msa0627350 | -0.813386 | 2.628245e-51 | -8.615850e-47 |
| Msa0137710 | Msa0661190 | 0.817143 | 3.841709e-52 | -8.615850e-47 |
| Msa0137710 | Msa0679550 | -0.824724 | 6.910509e-54 | -8.615850e-47 |
| Msa0137710 | Msa0700230 | -0.801765 | 7.714781e-49 | -8.615850e-47 |
| Msa0137710 | Msa0797970 | -0.820636 | 6.178414e-53 | -8.615850e-47 |
| Msa0137710 | Msa0821010 | -0.812454 | 4.205794e-51 | -8.615850e-47 |
| Msa0137710 | Msa0825240 | 0.822143 | 2.772912e-53 | -8.615850e-47 |
| Msa0137710 | Msa0827350 | 0.818706 | 1.703956e-52 | -8.615850e-47 |
| Msa0137710 | Msa0831590 | -0.826538 | 2.568580e-54 | -8.615850e-47 |
| Msa0137710 | Msa0833460 | -0.802887 | 4.531523e-49 | -8.615850e-47 |
| Msa0137710 | Msa0862110 | -0.804580 | 2.017652e-49 | -8.615850e-47 |
| Msa0137710 | Msa0864470 | 0.841426 | 4.785143e-58 | -8.615850e-47 |
| Msa0137710 | Msa0867520 | 0.803780 | 2.960049e-49 | -8.615850e-47 |
| Msa0137710 | Msa0869120 | -0.801255 | 9.814131e-49 | -8.615850e-47 |
| Msa0137710 | Msa0876360 | -0.817162 | 3.805523e-52 | -8.615850e-47 |
| Msa0137710 | Msa0901320 | -0.802662 | 5.044138e-49 | -8.615850e-47 |
| Msa0137710 | Msa0942550 | 0.814196 | 1.742411e-51 | -8.615850e-47 |
| Msa0137710 | Msa0942560 | 0.808598 | 2.863109e-50 | -8.615850e-47 |
| Msa0137710 | Msa0946280 | 0.859845 | 3.119620e-63 | -8.615850e-47 |
| Msa0137710 | Msa0946690 | 0.811468 | 6.895393e-51 | -8.615850e-47 |
| Msa0137710 | Msa0978700 | -0.804561 | 2.035875e-49 | -8.615850e-47 |
| Msa0137710 | Msa0984220 | 0.802591 | 5.215975e-49 | -8.615850e-47 |
| Msa0137710 | Msa1016910 | -0.809720 | 1.645841e-50 | -8.615850e-47 |
| Msa0137710 | Msa1026410 | -0.844980 | 5.402023e-59 | -8.615850e-47 |
| Msa0137710 | Msa1029080 | 0.811058 | 8.466337e-51 | -8.615850e-47 |
| Msa0137710 | Msa1033410 | 0.801729 | 7.849098e-49 | -8.615850e-47 |
| Msa0137710 | Msa1043250 | 0.809493 | 1.841163e-50 | -8.615850e-47 |
| Msa0137710 | Msa1055680 | -0.808840 | 2.541899e-50 | -8.615850e-47 |
| Msa0137710 | Msa1058170 | -0.829162 | 6.005403e-55 | -8.615850e-47 |
| Msa0137710 | Msa1065110 | -0.802598 | 5.200400e-49 | -8.615850e-47 |
| Msa0137710 | Msa1079730 | 0.805276 | 1.443239e-49 | -8.615850e-47 |
| Msa0137710 | Msa1080330 | 0.820561 | 6.426026e-53 | -8.615850e-47 |
| Msa0137710 | Msa1081790 | 0.808085 | 3.682519e-50 | -8.615850e-47 |
| Msa0137710 | Msa1102790 | -0.826941 | 2.058124e-54 | -8.615850e-47 |
| Msa0137710 | Msa1124540 | 0.841949 | 3.482735e-58 | -8.615850e-47 |
| Msa0137710 | Msa1156150 | 0.821070 | 4.908279e-53 | -8.615850e-47 |
| Msa0137710 | Msa1156170 | 0.811340 | 7.353769e-51 | -8.615850e-47 |
| Msa0137710 | Msa1163590 | 0.800938 | 1.139640e-48 | -8.615850e-47 |
| Msa0137710 | Msa1166090 | 0.800914 | 1.152540e-48 | -8.615850e-47 |
| Msa0137710 | Msa1168040 | 0.808187 | 3.502815e-50 | -8.615850e-47 |
| Msa0137710 | Msa1183100 | 0.817530 | 3.144111e-52 | -8.615850e-47 |
| Msa0137710 | Msa1191050 | 0.833098 | 6.481436e-56 | -8.615850e-47 |
| Msa0137710 | Msa1191890 | 0.810396 | 1.176785e-50 | -8.615850e-47 |
| Msa0137710 | Msa1207470 | 0.803551 | 3.302669e-49 | -8.615850e-47 |
| Msa0137710 | Msa1225150 | 0.833025 | 6.758426e-56 | -8.615850e-47 |
| Msa0137710 | Msa1242580 | 0.821385 | 4.152730e-53 | -8.615850e-47 |
| Msa0137710 | Msa1244720 | 0.872525 | 2.973822e-67 | -8.615850e-47 |
| Msa0137710 | Msa1270660 | -0.805568 | 1.253662e-49 | -8.615850e-47 |
| Msa0137710 | Msa1270730 | -0.807059 | 6.081642e-50 | -8.615850e-47 |
| Msa0137710 | Msa1276510 | -0.827050 | 1.937619e-54 | -8.615850e-47 |
| Msa0137710 | Msa1314770 | -0.800107 | 1.683383e-48 | -8.615850e-47 |
| Msa0137710 | Msa1325860 | 0.828585 | 8.282646e-55 | -8.615850e-47 |
| Msa0137710 | Msa1332040 | 0.806341 | 8.622992e-50 | -8.615850e-47 |
| Msa0137710 | Msa1361280 | 0.813719 | 2.220249e-51 | -8.615850e-47 |
| Msa0137710 | Msa1364330 | 0.807690 | 4.469412e-50 | -8.615850e-47 |
| Msa0137710 | Msa1371240 | -0.816646 | 4.968141e-52 | -8.615850e-47 |
| Msa0137710 | Msa1376160 | 0.800319 | 1.523627e-48 | -8.615850e-47 |
| Msa0137710 | Msa1388860 | -0.811405 | 7.116909e-51 | -8.615850e-47 |
| Msa0137710 | Msa1403340 | -0.847031 | 1.495036e-59 | -8.615850e-47 |
| Msa0137710 | Msa1404240 | 0.813884 | 2.042003e-51 | -8.615850e-47 |
| Msa0137710 | Msa1404300 | -0.814398 | 1.572629e-51 | -8.615850e-47 |
| Msa0137710 | Msa1406110 | 0.827447 | 1.556825e-54 | -8.615850e-47 |
| Msa0137710 | Msa1407470 | -0.848067 | 7.762644e-60 | -8.615850e-47 |
| Msa0137710 | Msa1418830 | 0.810845 | 9.414340e-51 | -8.615850e-47 |
| Msa0137710 | Msa1444740 | -0.861584 | 9.255855e-64 | -8.615850e-47 |
| Msa0137710 | Msa1452170 | -0.817660 | 2.939367e-52 | -8.615850e-47 |
| Msa0137710 | Msa1459760 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137710 | MtrunA17_Chr1g0210021 | 68.990 | 416 | 90 | 11 | 1 | 404 | 1 | 389 | 6.70e-138 | 402 |
| Msa0137710 | MtrunA17_Chr1g0200441 | 50.000 | 314 | 119 | 10 | 1 | 308 | 5 | 286 | 3.33e-63 | 210 |
| Msa0137710 | MtrunA17_Chr1g0210031 | 91.339 | 127 | 5 | 3 | 289 | 414 | 2 | 123 | 4.21e-63 | 199 |
| Msa0137710 | MtrunA17_Chr5g0422991 | 63.710 | 124 | 39 | 4 | 289 | 412 | 2 | 119 | 1.15e-38 | 135 |
| Msa0137710 | MtrunA17_Chr8g0343061 | 39.444 | 180 | 91 | 5 | 47 | 215 | 115 | 287 | 3.43e-25 | 107 |
| Msa0137710 | MtrunA17_Chr1g0197901 | 36.310 | 168 | 88 | 4 | 51 | 217 | 205 | 354 | 1.28e-18 | 88.2 |
| Msa0137710 | MtrunA17_Chr1g0197901 | 46.575 | 73 | 38 | 1 | 51 | 122 | 79 | 151 | 9.95e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0137710 | AT3G25860.1 | 54.286 | 315 | 126 | 6 | 7 | 310 | 16 | 323 | 4.95e-75 | 242 |
| Msa0137710 | AT1G34430.1 | 46.104 | 308 | 132 | 8 | 17 | 308 | 5 | 294 | 2.35e-60 | 203 |
| Msa0137710 | AT1G54220.1 | 39.181 | 171 | 102 | 2 | 47 | 215 | 112 | 282 | 1.55e-26 | 112 |
| Msa0137710 | AT1G54220.2 | 39.181 | 171 | 102 | 2 | 47 | 215 | 112 | 282 | 1.55e-26 | 112 |
| Msa0137710 | AT3G13930.1 | 38.953 | 172 | 101 | 3 | 47 | 215 | 112 | 282 | 6.75e-24 | 104 |
| Msa0137710 | AT3G52200.2 | 29.104 | 268 | 157 | 7 | 51 | 309 | 293 | 536 | 4.35e-19 | 90.1 |
| Msa0137710 | AT3G52200.2 | 36.000 | 125 | 75 | 2 | 51 | 170 | 166 | 290 | 2.01e-15 | 79.0 |
| Msa0137710 | AT3G52200.1 | 28.938 | 273 | 151 | 8 | 51 | 309 | 217 | 460 | 7.82e-19 | 89.4 |
| Msa0137710 | AT3G52200.1 | 36.000 | 125 | 75 | 2 | 51 | 170 | 90 | 214 | 3.33e-15 | 78.2 |
| Msa0137710 | AT1G68585.1 | 48.913 | 92 | 38 | 3 | 315 | 400 | 24 | 112 | 2.36e-17 | 78.2 |
Find 123 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTGATAATGGCAAATTT+AGG | 0.131684 | 1_3:-70329305 | None:intergenic |
| TGGGACTAGTCTTGCATCTT+TGG | 0.189720 | 1_3:+70328384 | Msa0137710:CDS |
| AAGATTGTTATTATGATAAA+AGG | 0.195948 | 1_3:+70328311 | Msa0137710:CDS |
| TGCTGCACCAGCTGCGATTC+CGG | 0.219139 | 1_3:+70327962 | Msa0137710:CDS |
| GGGGAAGGAGTCTTGTTTAA+TGG | 0.240314 | 1_3:-70329284 | None:intergenic |
| GGGAGGAGCGGTGAGGGAGG+AGG | 0.245830 | 1_3:-70327305 | None:intergenic |
| AGAAGGTGATACTTACATTT+AGG | 0.262994 | 1_3:+70329216 | Msa0137710:CDS |
| GCGGATGTGGAGGCTGCTGC+TGG | 0.275235 | 1_3:+70327864 | Msa0137710:CDS |
| GTTTGATAATGGCAAATTTA+GGG | 0.296856 | 1_3:-70329304 | None:intergenic |
| AGGTGTCGCTGTGATATTCT+TGG | 0.331912 | 1_3:-70327760 | None:intergenic |
| TAATGTCAGCAACTCTCTTC+TGG | 0.333777 | 1_3:-70328569 | None:intergenic |
| GCTGCACCAGCTGCGATTCC+GGG | 0.340411 | 1_3:+70327963 | Msa0137710:CDS |
| GGAAAAGGATTTGCGGGGAG+GGG | 0.354418 | 1_3:-70327325 | None:intergenic |
| GAGGGGAGGAGCGGTGAGGG+AGG | 0.354889 | 1_3:-70327308 | None:intergenic |
| TGAATCTGATAAGGCTGATA+TGG | 0.376491 | 1_3:+70327479 | Msa0137710:CDS |
| GCCGCCGGTGGAGGCGGTGG+TGG | 0.387927 | 1_3:-70327714 | None:intergenic |
| CGCCGGAGGAGGAGAGGAAG+AGG | 0.399022 | 1_3:-70327661 | None:intergenic |
| GGAGGAGAGTGGTGAATTGA+GGG | 0.399212 | 1_3:-70327287 | None:intergenic |
| AGGAGGAGAGTGGTGAATTG+AGG | 0.399224 | 1_3:-70327288 | None:intergenic |
| TTTGAAGGAAAAGGATTTGC+GGG | 0.403176 | 1_3:-70327331 | None:intergenic |
| GCGGAATATCCGTTTGATAA+TGG | 0.404318 | 1_3:-70329315 | None:intergenic |
| GGAGTCTTTGTCACTGCCAC+TGG | 0.407535 | 1_3:+70328405 | Msa0137710:CDS |
| CGGATTTGACGGATTTAGCC+TGG | 0.408800 | 1_3:-70327626 | None:intergenic |
| GCTCCGGTTGGTGCTCCAAT+TGG | 0.424384 | 1_3:+70327561 | Msa0137710:CDS |
| GCCGGTGGAGGCGGTGGTGG+AGG | 0.425148 | 1_3:-70327711 | None:intergenic |
| ACCGCCGCCGGTGGAGGCGG+TGG | 0.426146 | 1_3:-70327717 | None:intergenic |
| CGGGGAGGGGAGGAGCGGTG+AGG | 0.432565 | 1_3:-70327312 | None:intergenic |
| TTAACCGCCGCCGGTGGAGG+CGG | 0.434204 | 1_3:-70327720 | None:intergenic |
| AAAGGATTTGCGGGGAGGGG+AGG | 0.434206 | 1_3:-70327322 | None:intergenic |
| GGTGGAGGCGGTGGTGGAGG+AGG | 0.439450 | 1_3:-70327708 | None:intergenic |
| TCCTCCTCCGGCGACTCCTC+AGG | 0.441707 | 1_3:+70327671 | Msa0137710:CDS |
| TAGGATTACTCCGGCGGATG+TGG | 0.442153 | 1_3:+70327851 | Msa0137710:CDS |
| CCTTTAGGCGCGGTGGGAGC+AGG | 0.450725 | 1_3:-70327927 | None:intergenic |
| CCTGCTCCCACCGCGCCTAA+AGG | 0.451441 | 1_3:+70327927 | Msa0137710:CDS |
| AACAACGACACTATCACCTT+TGG | 0.458858 | 1_3:-70327454 | None:intergenic |
| AGGAAAAGGATTTGCGGGGA+GGG | 0.466496 | 1_3:-70327326 | None:intergenic |
| GTCAATGGGACTGGTCCGTT+TGG | 0.467430 | 1_3:+70327828 | Msa0137710:CDS |
| CTAAATTTGCCATTATCAAA+CGG | 0.468003 | 1_3:+70329306 | Msa0137710:CDS |
| TTCCTCTTCCTCTCCTCCTC+CGG | 0.468287 | 1_3:+70327659 | Msa0137710:CDS |
| GTTTCAGCAAGTAAACCAAT+TGG | 0.469325 | 1_3:-70327576 | None:intergenic |
| AATAAACACTCAGTTTCTGT+TGG | 0.469610 | 1_3:+70328249 | Msa0137710:intron |
| CGTTGTTGTTGAATCTGATA+AGG | 0.474840 | 1_3:+70327470 | Msa0137710:CDS |
| AGAAGAAGAAGCGGATTTGA+CGG | 0.475207 | 1_3:-70327637 | None:intergenic |
| GCAGTAGAAGAACCACCTTT+AGG | 0.475879 | 1_3:-70327942 | None:intergenic |
| CCCAGAAAGAGGAAAACTCT+TGG | 0.478273 | 1_3:-70328365 | None:intergenic |
| TTTGGAGAGAGTGTCGCCTT+CGG | 0.478453 | 1_3:-70327436 | None:intergenic |
| CGGATGTGGAGGCTGCTGCT+GGG | 0.484662 | 1_3:+70327865 | Msa0137710:CDS |
| TCCTGAGGAGTCGCCGGAGG+AGG | 0.486371 | 1_3:-70327672 | None:intergenic |
| ATTTGCGGGGAGGGGAGGAG+CGG | 0.486564 | 1_3:-70327317 | None:intergenic |
| GGGGAGGGGAGGAGCGGTGA+GGG | 0.488786 | 1_3:-70327311 | None:intergenic |
| GCGGTGAGGGAGGAGGAGAG+TGG | 0.492755 | 1_3:-70327298 | None:intergenic |
| GTTGACATTGCATCAGTCAA+TGG | 0.493986 | 1_3:+70327813 | Msa0137710:CDS |
| GACTTAACCGCCGCCGGTGG+AGG | 0.494592 | 1_3:-70327723 | None:intergenic |
| AAACCAATTGGAGCACCAAC+CGG | 0.494669 | 1_3:-70327564 | None:intergenic |
| GTCAGCAACTCTCTTCTGGC+AGG | 0.495054 | 1_3:-70328565 | None:intergenic |
| GTCAATTGTGGTGAATGTAT+TGG | 0.498672 | 1_3:+70329190 | Msa0137710:CDS |
| CCGAGGGTAAAATCGTCTCT+TGG | 0.507291 | 1_3:+70327406 | Msa0137710:CDS |
| TAAGAAGTTAAATAAAACTA+AGG | 0.508098 | 1_3:+70328282 | Msa0137710:CDS |
| TCCTCCACCACCGCCTCCAC+CGG | 0.509369 | 1_3:+70327710 | Msa0137710:CDS |
| TTGACATTGCATCAGTCAAT+GGG | 0.511963 | 1_3:+70327814 | Msa0137710:CDS |
| TCACAAATAGTAGAGATGTA+AGG | 0.514214 | 1_3:+70329493 | Msa0137710:three_prime_UTR |
| GAAGCTTGCAAAGCAGCATA+AGG | 0.516061 | 1_3:+70327791 | Msa0137710:CDS |
| GGTGTCGCTGTGATATTCTT+GGG | 0.516252 | 1_3:-70327759 | None:intergenic |
| TTGTTATTGCTTTCTCAACA+TGG | 0.518334 | 1_3:+70329466 | Msa0137710:three_prime_UTR |
| AGATTTCACGGATCTTAGCT+TGG | 0.518622 | 1_3:-70327356 | None:intergenic |
| ATGGGACTGGTCCGTTTGGT+AGG | 0.522274 | 1_3:+70327832 | Msa0137710:CDS |
| TTTGCAAGCTTCTTCGCTTG+AGG | 0.523490 | 1_3:-70327780 | None:intergenic |
| GGAAGAGGAAGAAGAAGAAG+CGG | 0.527687 | 1_3:-70327646 | None:intergenic |
| ACCACCGCCTCCACCGGCGG+CGG | 0.527835 | 1_3:+70327716 | Msa0137710:CDS |
| CTCGAACCCGGAATCGCAGC+TGG | 0.528731 | 1_3:-70327969 | None:intergenic |
| AGGAATCTTCAGAAATCAGC+TGG | 0.529337 | 1_3:+70328331 | Msa0137710:CDS |
| ATAATGGCAAATTTAGGGGA+AGG | 0.529849 | 1_3:-70329299 | None:intergenic |
| TATAATTACTAATTAACCAC+TGG | 0.531693 | 1_3:-70329342 | None:intergenic |
| TGCTGTTGCTAAGAATATGA+TGG | 0.531804 | 1_3:+70328019 | Msa0137710:CDS |
| GCTCCCACCGCGCCTAAAGG+TGG | 0.537172 | 1_3:+70327930 | Msa0137710:CDS |
| GTGCAGGCATGAAGATTTCA+CGG | 0.539099 | 1_3:-70327368 | None:intergenic |
| GCAAGACTAGTCCCAGAAAG+AGG | 0.539833 | 1_3:-70328376 | None:intergenic |
| AGGAGTCGCCGGAGGAGGAG+AGG | 0.540356 | 1_3:-70327667 | None:intergenic |
| GCGGTTAAGTCTGTTTCCGA+TGG | 0.542027 | 1_3:+70327735 | Msa0137710:CDS |
| CGACGAAGGCGAAACAGCTC+CGG | 0.544268 | 1_3:+70327545 | Msa0137710:CDS |
| AAGGAAAAGGATTTGCGGGG+AGG | 0.547486 | 1_3:-70327327 | None:intergenic |
| GCCGCTATCGTTGTCGACGA+AGG | 0.556593 | 1_3:+70327531 | Msa0137710:CDS |
| TATCGCTGAAGCTCAAGCCC+AGG | 0.558264 | 1_3:+70327608 | Msa0137710:CDS |
| GGTGATGAGTAATGTAGCTC+CGG | 0.561935 | 1_3:+70327896 | Msa0137710:CDS |
| GAAGTTTCCTGAGGAGTCGC+CGG | 0.562506 | 1_3:-70327678 | None:intergenic |
| GTCATAGTGGAACTGAGTGC+AGG | 0.565894 | 1_3:-70327384 | None:intergenic |
| GATTACTCCGGCGGATGTGG+AGG | 0.566437 | 1_3:+70327854 | Msa0137710:CDS |
| GAACCACCTTTAGGCGCGGT+GGG | 0.571512 | 1_3:-70327933 | None:intergenic |
| TGTGATATTCTTGGGACCAT+CGG | 0.577315 | 1_3:-70327751 | None:intergenic |
| GCAGCAGCCTCCACATCCGC+CGG | 0.578668 | 1_3:-70327861 | None:intergenic |
| GGTGAATGTATTGGAAAAGA+AGG | 0.579398 | 1_3:+70329199 | Msa0137710:CDS |
| CGGATATTCCGCTCATCCAG+TGG | 0.579718 | 1_3:+70329326 | Msa0137710:CDS |
| GTGGGAGCAGGAGTCGCCAC+CGG | 0.583580 | 1_3:-70327915 | None:intergenic |
| ATTGCATCAGTCAATGGGAC+TGG | 0.584574 | 1_3:+70327819 | Msa0137710:CDS |
| ACACTCAGTTTCTGTTGGAG+AGG | 0.587433 | 1_3:+70328254 | Msa0137710:intron |
| GGATTTGACGGATTTAGCCT+GGG | 0.588827 | 1_3:-70327625 | None:intergenic |
| GAGGAGAGTGGTGAATTGAG+GGG | 0.588927 | 1_3:-70327286 | None:intergenic |
| TTTGATAATGGCAAATTTAG+GGG | 0.595724 | 1_3:-70329303 | None:intergenic |
| GCCGGAGTAATCCTACCAAA+CGG | 0.596459 | 1_3:-70327843 | None:intergenic |
| TCCACCACCGCCTCCACCGG+CGG | 0.601506 | 1_3:+70327713 | Msa0137710:CDS |
| TCCGTTTGGTAGGATTACTC+CGG | 0.603724 | 1_3:+70327842 | Msa0137710:CDS |
| AACAGAATCTTATGCACATG+TGG | 0.606171 | 1_3:-70329382 | None:intergenic |
| CTAATTAACCACTGGATGAG+CGG | 0.609688 | 1_3:-70329334 | None:intergenic |
| AGAACCACCTTTAGGCGCGG+TGG | 0.612275 | 1_3:-70327934 | None:intergenic |
| GAAACAGACTTAACCGCCGC+CGG | 0.613417 | 1_3:-70327729 | None:intergenic |
| ACAGACTTAACCGCCGCCGG+TGG | 0.613983 | 1_3:-70327726 | None:intergenic |
| CTCAGTTCCACTATGACCGA+GGG | 0.618720 | 1_3:+70327390 | Msa0137710:CDS |
| GCCTTCGTCGACAACGATAG+CGG | 0.619826 | 1_3:-70327532 | None:intergenic |
| GGAGCTACATTACTCATCAC+CGG | 0.621644 | 1_3:-70327894 | None:intergenic |
| GTCTCTTGGATCAAATCCGA+AGG | 0.623986 | 1_3:+70327420 | Msa0137710:CDS |
| AGCAGAGACAGAGTCAATTG+TGG | 0.625282 | 1_3:+70329178 | Msa0137710:intron |
| TTGAAGGAAAAGGATTTGCG+GGG | 0.626517 | 1_3:-70327330 | None:intergenic |
| GACGTTGAAACTTTCTACGA+CGG | 0.630695 | 1_3:+70327501 | Msa0137710:CDS |
| GTTTCCTGAGGAGTCGCCGG+AGG | 0.633462 | 1_3:-70327675 | None:intergenic |
| ACTCAGTTCCACTATGACCG+AGG | 0.633716 | 1_3:+70327389 | Msa0137710:CDS |
| GATGAGTAATGTAGCTCCGG+TGG | 0.634350 | 1_3:+70327899 | Msa0137710:CDS |
| GTTTGGTAGGATTACTCCGG+CGG | 0.637694 | 1_3:+70327845 | Msa0137710:CDS |
| GGCTGCTGCTGGGATTACAC+CGG | 0.642960 | 1_3:+70327875 | Msa0137710:CDS |
| GAAGGCGACACTCTCTCCAA+AGG | 0.645069 | 1_3:+70327438 | Msa0137710:CDS |
| GAAGGCGAAACAGCTCCGGT+TGG | 0.650328 | 1_3:+70327549 | Msa0137710:CDS |
| AAAGCAACATTACTCGAACC+CGG | 0.665722 | 1_3:-70327981 | None:intergenic |
| GGAGACTGAGAAGTTTCCTG+AGG | 0.667713 | 1_3:-70327687 | None:intergenic |
| AGAAGAACCACCTTTAGGCG+CGG | 0.690205 | 1_3:-70327937 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAAGTTAAATAAAACTA+AGG | + | chr1_3:70328282-70328301 | Msa0137710:CDS | 15.0% |
| !!! | AAGATTGTTATTATGATAAA+AGG | + | chr1_3:70328311-70328330 | Msa0137710:CDS | 15.0% |
| !! | TCTATATATATAGTGTTTAA+TGG | + | chr1_3:70328481-70328500 | Msa0137710:intron | 15.0% |
| !! | AGTAAATAACAATAATTGTA+AGG | - | chr1_3:70328936-70328955 | None:intergenic | 15.0% |
| !! | TAAGAAGTTAAATAAAACTA+AGG | + | chr1_3:70328282-70328301 | Msa0137710:CDS | 15.0% |
| !!! | AAGATTGTTATTATGATAAA+AGG | + | chr1_3:70328311-70328330 | Msa0137710:CDS | 15.0% |
| !! | TCTATATATATAGTGTTTAA+TGG | + | chr1_3:70328481-70328500 | Msa0137710:intron | 15.0% |
| !! | AGTAAATAACAATAATTGTA+AGG | - | chr1_3:70328936-70328955 | None:intergenic | 15.0% |
| !! | AAAACTCAAAATACAGTAAA+AGG | - | chr1_3:70328445-70328464 | None:intergenic | 20.0% |
| !! | GACATTATTACAAAAATGAA+TGG | + | chr1_3:70328585-70328604 | Msa0137710:CDS | 20.0% |
| !!! | CATTTTTGTTCTGTTAAATA+AGG | + | chr1_3:70328628-70328647 | Msa0137710:intron | 20.0% |
| !! | TATAATTACTAATTAACCAC+TGG | - | chr1_3:70329345-70329364 | None:intergenic | 20.0% |
| !! | AAAACTCAAAATACAGTAAA+AGG | - | chr1_3:70328445-70328464 | None:intergenic | 20.0% |
| !! | GACATTATTACAAAAATGAA+TGG | + | chr1_3:70328585-70328604 | Msa0137710:CDS | 20.0% |
| !!! | CATTTTTGTTCTGTTAAATA+AGG | + | chr1_3:70328628-70328647 | Msa0137710:intron | 20.0% |
| !! | TATAATTACTAATTAACCAC+TGG | - | chr1_3:70329345-70329364 | None:intergenic | 20.0% |
| ! | ATAGAACAATTTCATCTCTT+GGG | - | chr1_3:70328216-70328235 | None:intergenic | 25.0% |
| ! | AAATAAGGAGATATCATGTA+TGG | + | chr1_3:70328643-70328662 | Msa0137710:intron | 25.0% |
| !! | TCTTTCACTGATTATATACA+TGG | + | chr1_3:70328991-70329010 | Msa0137710:intron | 25.0% |
| ! | TGCTGAAAAATTATAGATAC+GGG | - | chr1_3:70329162-70329181 | None:intergenic | 25.0% |
| ! | CTGCTGAAAAATTATAGATA+CGG | - | chr1_3:70329163-70329182 | None:intergenic | 25.0% |
| !!! | TTTGATAATGGCAAATTTAG+GGG | - | chr1_3:70329306-70329325 | None:intergenic | 25.0% |
| !!! | GTTTGATAATGGCAAATTTA+GGG | - | chr1_3:70329307-70329326 | None:intergenic | 25.0% |
| ! | CTAAATTTGCCATTATCAAA+CGG | + | chr1_3:70329306-70329325 | Msa0137710:CDS | 25.0% |
| ! | ATAGAACAATTTCATCTCTT+GGG | - | chr1_3:70328216-70328235 | None:intergenic | 25.0% |
| ! | AAATAAGGAGATATCATGTA+TGG | + | chr1_3:70328643-70328662 | Msa0137710:intron | 25.0% |
| !! | TCTTTCACTGATTATATACA+TGG | + | chr1_3:70328991-70329010 | Msa0137710:intron | 25.0% |
| ! | TGCTGAAAAATTATAGATAC+GGG | - | chr1_3:70329162-70329181 | None:intergenic | 25.0% |
| ! | CTGCTGAAAAATTATAGATA+CGG | - | chr1_3:70329163-70329182 | None:intergenic | 25.0% |
| !!! | TTTGATAATGGCAAATTTAG+GGG | - | chr1_3:70329306-70329325 | None:intergenic | 25.0% |
| !!! | GTTTGATAATGGCAAATTTA+GGG | - | chr1_3:70329307-70329326 | None:intergenic | 25.0% |
| ! | CTAAATTTGCCATTATCAAA+CGG | + | chr1_3:70329306-70329325 | Msa0137710:CDS | 25.0% |
| !! | TTTTGAAGGAAAAGGATTTG+CGG | - | chr1_3:70327335-70327354 | None:intergenic | 30.0% |
| GATAGAACAATTTCATCTCT+TGG | - | chr1_3:70328217-70328236 | None:intergenic | 30.0% | |
| AATAAACACTCAGTTTCTGT+TGG | + | chr1_3:70328249-70328268 | Msa0137710:intron | 30.0% | |
| CTGAAAAATTATAGATACGG+GGG | - | chr1_3:70329160-70329179 | None:intergenic | 30.0% | |
| GCTGAAAAATTATAGATACG+GGG | - | chr1_3:70329161-70329180 | None:intergenic | 30.0% | |
| AGAAGGTGATACTTACATTT+AGG | + | chr1_3:70329216-70329235 | Msa0137710:CDS | 30.0% | |
| AGGATATCAAAAACAACTGT+TGG | + | chr1_3:70329236-70329255 | Msa0137710:CDS | 30.0% | |
| !! | CGTTTGATAATGGCAAATTT+AGG | - | chr1_3:70329308-70329327 | None:intergenic | 30.0% |
| ! | TTGTTATTGCTTTCTCAACA+TGG | + | chr1_3:70329466-70329485 | Msa0137710:three_prime_UTR | 30.0% |
| TCACAAATAGTAGAGATGTA+AGG | + | chr1_3:70329493-70329512 | Msa0137710:three_prime_UTR | 30.0% | |
| !! | TTTTGAAGGAAAAGGATTTG+CGG | - | chr1_3:70327335-70327354 | None:intergenic | 30.0% |
| GATAGAACAATTTCATCTCT+TGG | - | chr1_3:70328217-70328236 | None:intergenic | 30.0% | |
| AATAAACACTCAGTTTCTGT+TGG | + | chr1_3:70328249-70328268 | Msa0137710:intron | 30.0% | |
| CTGAAAAATTATAGATACGG+GGG | - | chr1_3:70329160-70329179 | None:intergenic | 30.0% | |
| GCTGAAAAATTATAGATACG+GGG | - | chr1_3:70329161-70329180 | None:intergenic | 30.0% | |
| AGAAGGTGATACTTACATTT+AGG | + | chr1_3:70329216-70329235 | Msa0137710:CDS | 30.0% | |
| AGGATATCAAAAACAACTGT+TGG | + | chr1_3:70329236-70329255 | Msa0137710:CDS | 30.0% | |
| !! | CGTTTGATAATGGCAAATTT+AGG | - | chr1_3:70329308-70329327 | None:intergenic | 30.0% |
| ! | TTGTTATTGCTTTCTCAACA+TGG | + | chr1_3:70329466-70329485 | Msa0137710:three_prime_UTR | 30.0% |
| TCACAAATAGTAGAGATGTA+AGG | + | chr1_3:70329493-70329512 | Msa0137710:three_prime_UTR | 30.0% | |
| TTTGAAGGAAAAGGATTTGC+GGG | - | chr1_3:70327334-70327353 | None:intergenic | 35.0% | |
| !! | AGCTTGGATTTTGAAGGAAA+AGG | - | chr1_3:70327343-70327362 | None:intergenic | 35.0% |
| !! | GATCTTAGCTTGGATTTTGA+AGG | - | chr1_3:70327349-70327368 | None:intergenic | 35.0% |
| ! | CGTTGTTGTTGAATCTGATA+AGG | + | chr1_3:70327470-70327489 | Msa0137710:CDS | 35.0% |
| TGAATCTGATAAGGCTGATA+TGG | + | chr1_3:70327479-70327498 | Msa0137710:CDS | 35.0% | |
| GTTTCAGCAAGTAAACCAAT+TGG | - | chr1_3:70327579-70327598 | None:intergenic | 35.0% | |
| TTGACATTGCATCAGTCAAT+GGG | + | chr1_3:70327814-70327833 | Msa0137710:CDS | 35.0% | |
| TGCTGTTGCTAAGAATATGA+TGG | + | chr1_3:70328019-70328038 | Msa0137710:CDS | 35.0% | |
| ! | TTATGACTTGAGTTGTTGGT+GGG | - | chr1_3:70328189-70328208 | None:intergenic | 35.0% |
| ! | ATGCTTATGACTTGAGTTGT+TGG | - | chr1_3:70328193-70328212 | None:intergenic | 35.0% |
| !! | GTGATTGTTTTGTTGAGAAC+AGG | + | chr1_3:70328503-70328522 | Msa0137710:intron | 35.0% |
| TCTTCTTGCAAAGCAAATAG+AGG | - | chr1_3:70328756-70328775 | None:intergenic | 35.0% | |
| TCTATTTGCTTTGCAAGAAG+AGG | + | chr1_3:70328755-70328774 | Msa0137710:intron | 35.0% | |
| CAGTAGCAACATAAACAGTA+AGG | - | chr1_3:70328813-70328832 | None:intergenic | 35.0% | |
| CAAGCTAGAGGAATGTTATA+GGG | + | chr1_3:70328867-70328886 | Msa0137710:intron | 35.0% | |
| GTCAATTGTGGTGAATGTAT+TGG | + | chr1_3:70329190-70329209 | Msa0137710:CDS | 35.0% | |
| GGTGAATGTATTGGAAAAGA+AGG | + | chr1_3:70329199-70329218 | Msa0137710:CDS | 35.0% | |
| ATAATGGCAAATTTAGGGGA+AGG | - | chr1_3:70329302-70329321 | None:intergenic | 35.0% | |
| AACAGAATCTTATGCACATG+TGG | - | chr1_3:70329385-70329404 | None:intergenic | 35.0% | |
| TTTGAAGGAAAAGGATTTGC+GGG | - | chr1_3:70327334-70327353 | None:intergenic | 35.0% | |
| !! | AGCTTGGATTTTGAAGGAAA+AGG | - | chr1_3:70327343-70327362 | None:intergenic | 35.0% |
| !! | GATCTTAGCTTGGATTTTGA+AGG | - | chr1_3:70327349-70327368 | None:intergenic | 35.0% |
| ! | CGTTGTTGTTGAATCTGATA+AGG | + | chr1_3:70327470-70327489 | Msa0137710:CDS | 35.0% |
| TGAATCTGATAAGGCTGATA+TGG | + | chr1_3:70327479-70327498 | Msa0137710:CDS | 35.0% | |
| GTTTCAGCAAGTAAACCAAT+TGG | - | chr1_3:70327579-70327598 | None:intergenic | 35.0% | |
| TTGACATTGCATCAGTCAAT+GGG | + | chr1_3:70327814-70327833 | Msa0137710:CDS | 35.0% | |
| TGCTGTTGCTAAGAATATGA+TGG | + | chr1_3:70328019-70328038 | Msa0137710:CDS | 35.0% | |
| ! | TTATGACTTGAGTTGTTGGT+GGG | - | chr1_3:70328189-70328208 | None:intergenic | 35.0% |
| ! | ATGCTTATGACTTGAGTTGT+TGG | - | chr1_3:70328193-70328212 | None:intergenic | 35.0% |
| !! | GTGATTGTTTTGTTGAGAAC+AGG | + | chr1_3:70328503-70328522 | Msa0137710:intron | 35.0% |
| TCTTCTTGCAAAGCAAATAG+AGG | - | chr1_3:70328756-70328775 | None:intergenic | 35.0% | |
| TCTATTTGCTTTGCAAGAAG+AGG | + | chr1_3:70328755-70328774 | Msa0137710:intron | 35.0% | |
| CAGTAGCAACATAAACAGTA+AGG | - | chr1_3:70328813-70328832 | None:intergenic | 35.0% | |
| CAAGCTAGAGGAATGTTATA+GGG | + | chr1_3:70328867-70328886 | Msa0137710:intron | 35.0% | |
| GTCAATTGTGGTGAATGTAT+TGG | + | chr1_3:70329190-70329209 | Msa0137710:CDS | 35.0% | |
| GGTGAATGTATTGGAAAAGA+AGG | + | chr1_3:70329199-70329218 | Msa0137710:CDS | 35.0% | |
| ATAATGGCAAATTTAGGGGA+AGG | - | chr1_3:70329302-70329321 | None:intergenic | 35.0% | |
| AACAGAATCTTATGCACATG+TGG | - | chr1_3:70329385-70329404 | None:intergenic | 35.0% | |
| TTGAAGGAAAAGGATTTGCG+GGG | - | chr1_3:70327333-70327352 | None:intergenic | 40.0% | |
| AGATTTCACGGATCTTAGCT+TGG | - | chr1_3:70327359-70327378 | None:intergenic | 40.0% | |
| AACAACGACACTATCACCTT+TGG | - | chr1_3:70327457-70327476 | None:intergenic | 40.0% | |
| GACGTTGAAACTTTCTACGA+CGG | + | chr1_3:70327501-70327520 | Msa0137710:CDS | 40.0% | |
| ! | AGAAGAAGAAGCGGATTTGA+CGG | - | chr1_3:70327640-70327659 | None:intergenic | 40.0% |
| TGTGATATTCTTGGGACCAT+CGG | - | chr1_3:70327754-70327773 | None:intergenic | 40.0% | |
| GTTGACATTGCATCAGTCAA+TGG | + | chr1_3:70327813-70327832 | Msa0137710:CDS | 40.0% | |
| AAAGCAACATTACTCGAACC+CGG | - | chr1_3:70327984-70328003 | None:intergenic | 40.0% | |
| ! | TATGACTTGAGTTGTTGGTG+GGG | - | chr1_3:70328188-70328207 | None:intergenic | 40.0% |
| ! | CTTATGACTTGAGTTGTTGG+TGG | - | chr1_3:70328190-70328209 | None:intergenic | 40.0% |
| AGGAATCTTCAGAAATCAGC+TGG | + | chr1_3:70328331-70328350 | Msa0137710:CDS | 40.0% | |
| ! | TCCAAGAGTTTTCCTCTTTC+TGG | + | chr1_3:70328364-70328383 | Msa0137710:CDS | 40.0% |
| ! | CCAAGAGTTTTCCTCTTTCT+GGG | + | chr1_3:70328365-70328384 | Msa0137710:CDS | 40.0% |
| GGTTCAAAACTACATACCAG+TGG | - | chr1_3:70328424-70328443 | None:intergenic | 40.0% | |
| TAATGTCAGCAACTCTCTTC+TGG | - | chr1_3:70328572-70328591 | None:intergenic | 40.0% | |
| AAGGAGATATCATGTATGGC+TGG | + | chr1_3:70328647-70328666 | Msa0137710:intron | 40.0% | |
| AGAGGTTAAAGAAGACAGAG+AGG | + | chr1_3:70328773-70328792 | Msa0137710:intron | 40.0% | |
| ! | ATAAGCCCTGCATGTGTTTT+TGG | + | chr1_3:70328841-70328860 | Msa0137710:intron | 40.0% |
| GCAAGCTAGAGGAATGTTAT+AGG | + | chr1_3:70328866-70328885 | Msa0137710:intron | 40.0% | |
| GCGGAATATCCGTTTGATAA+TGG | - | chr1_3:70329318-70329337 | None:intergenic | 40.0% | |
| CTAATTAACCACTGGATGAG+CGG | - | chr1_3:70329337-70329356 | None:intergenic | 40.0% | |
| TTGAAGGAAAAGGATTTGCG+GGG | - | chr1_3:70327333-70327352 | None:intergenic | 40.0% | |
| AGATTTCACGGATCTTAGCT+TGG | - | chr1_3:70327359-70327378 | None:intergenic | 40.0% | |
| AACAACGACACTATCACCTT+TGG | - | chr1_3:70327457-70327476 | None:intergenic | 40.0% | |
| GACGTTGAAACTTTCTACGA+CGG | + | chr1_3:70327501-70327520 | Msa0137710:CDS | 40.0% | |
| ! | AGAAGAAGAAGCGGATTTGA+CGG | - | chr1_3:70327640-70327659 | None:intergenic | 40.0% |
| TGTGATATTCTTGGGACCAT+CGG | - | chr1_3:70327754-70327773 | None:intergenic | 40.0% | |
| GTTGACATTGCATCAGTCAA+TGG | + | chr1_3:70327813-70327832 | Msa0137710:CDS | 40.0% | |
| AAAGCAACATTACTCGAACC+CGG | - | chr1_3:70327984-70328003 | None:intergenic | 40.0% | |
| ! | TATGACTTGAGTTGTTGGTG+GGG | - | chr1_3:70328188-70328207 | None:intergenic | 40.0% |
| ! | CTTATGACTTGAGTTGTTGG+TGG | - | chr1_3:70328190-70328209 | None:intergenic | 40.0% |
| AGGAATCTTCAGAAATCAGC+TGG | + | chr1_3:70328331-70328350 | Msa0137710:CDS | 40.0% | |
| ! | TCCAAGAGTTTTCCTCTTTC+TGG | + | chr1_3:70328364-70328383 | Msa0137710:CDS | 40.0% |
| ! | CCAAGAGTTTTCCTCTTTCT+GGG | + | chr1_3:70328365-70328384 | Msa0137710:CDS | 40.0% |
| GGTTCAAAACTACATACCAG+TGG | - | chr1_3:70328424-70328443 | None:intergenic | 40.0% | |
| TAATGTCAGCAACTCTCTTC+TGG | - | chr1_3:70328572-70328591 | None:intergenic | 40.0% | |
| AAGGAGATATCATGTATGGC+TGG | + | chr1_3:70328647-70328666 | Msa0137710:intron | 40.0% | |
| AGAGGTTAAAGAAGACAGAG+AGG | + | chr1_3:70328773-70328792 | Msa0137710:intron | 40.0% | |
| ! | ATAAGCCCTGCATGTGTTTT+TGG | + | chr1_3:70328841-70328860 | Msa0137710:intron | 40.0% |
| GCAAGCTAGAGGAATGTTAT+AGG | + | chr1_3:70328866-70328885 | Msa0137710:intron | 40.0% | |
| GCGGAATATCCGTTTGATAA+TGG | - | chr1_3:70329318-70329337 | None:intergenic | 40.0% | |
| CTAATTAACCACTGGATGAG+CGG | - | chr1_3:70329337-70329356 | None:intergenic | 40.0% | |
| GTGCAGGCATGAAGATTTCA+CGG | - | chr1_3:70327371-70327390 | None:intergenic | 45.0% | |
| ! | GATTTTACCCTCGGTCATAG+TGG | - | chr1_3:70327400-70327419 | None:intergenic | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1_3:70327409-70327428 | None:intergenic | 45.0% |
| GTCTCTTGGATCAAATCCGA+AGG | + | chr1_3:70327420-70327439 | Msa0137710:CDS | 45.0% | |
| ! | AAACCAATTGGAGCACCAAC+CGG | - | chr1_3:70327567-70327586 | None:intergenic | 45.0% |
| !! | GGATTTGACGGATTTAGCCT+GGG | - | chr1_3:70327628-70327647 | None:intergenic | 45.0% |
| GGAAGAGGAAGAAGAAGAAG+CGG | - | chr1_3:70327649-70327668 | None:intergenic | 45.0% | |
| !! | GGTGTCGCTGTGATATTCTT+GGG | - | chr1_3:70327762-70327781 | None:intergenic | 45.0% |
| !! | AGGTGTCGCTGTGATATTCT+TGG | - | chr1_3:70327763-70327782 | None:intergenic | 45.0% |
| TTTGCAAGCTTCTTCGCTTG+AGG | - | chr1_3:70327783-70327802 | None:intergenic | 45.0% | |
| GAAGCTTGCAAAGCAGCATA+AGG | + | chr1_3:70327791-70327810 | Msa0137710:CDS | 45.0% | |
| ATTGCATCAGTCAATGGGAC+TGG | + | chr1_3:70327819-70327838 | Msa0137710:CDS | 45.0% | |
| TCCGTTTGGTAGGATTACTC+CGG | + | chr1_3:70327842-70327861 | Msa0137710:CDS | 45.0% | |
| GGAGCTACATTACTCATCAC+CGG | - | chr1_3:70327897-70327916 | None:intergenic | 45.0% | |
| GGTGATGAGTAATGTAGCTC+CGG | + | chr1_3:70327896-70327915 | Msa0137710:CDS | 45.0% | |
| GCAGTAGAAGAACCACCTTT+AGG | - | chr1_3:70327945-70327964 | None:intergenic | 45.0% | |
| ACACTCAGTTTCTGTTGGAG+AGG | + | chr1_3:70328254-70328273 | Msa0137710:intron | 45.0% | |
| CCCAGAAAGAGGAAAACTCT+TGG | - | chr1_3:70328368-70328387 | None:intergenic | 45.0% | |
| !! | TGGGACTAGTCTTGCATCTT+TGG | + | chr1_3:70328384-70328403 | Msa0137710:CDS | 45.0% |
| !! | GTTTTGTTGAGAACAGGTGC+AGG | + | chr1_3:70328509-70328528 | Msa0137710:intron | 45.0% |
| TGCAGCCAAAAACACATGCA+GGG | - | chr1_3:70328849-70328868 | None:intergenic | 45.0% | |
| TTGCAGCCAAAAACACATGC+AGG | - | chr1_3:70328850-70328869 | None:intergenic | 45.0% | |
| !!! | TGTTTTTGGCTGCAAGCTAG+AGG | + | chr1_3:70328855-70328874 | Msa0137710:intron | 45.0% |
| AGCAGAGACAGAGTCAATTG+TGG | + | chr1_3:70329178-70329197 | Msa0137710:intron | 45.0% | |
| !! | GGGGAAGGAGTCTTGTTTAA+TGG | - | chr1_3:70329287-70329306 | None:intergenic | 45.0% |
| GTGCAGGCATGAAGATTTCA+CGG | - | chr1_3:70327371-70327390 | None:intergenic | 45.0% | |
| ! | GATTTTACCCTCGGTCATAG+TGG | - | chr1_3:70327400-70327419 | None:intergenic | 45.0% |
| ! | CCAAGAGACGATTTTACCCT+CGG | - | chr1_3:70327409-70327428 | None:intergenic | 45.0% |
| GTCTCTTGGATCAAATCCGA+AGG | + | chr1_3:70327420-70327439 | Msa0137710:CDS | 45.0% | |
| ! | AAACCAATTGGAGCACCAAC+CGG | - | chr1_3:70327567-70327586 | None:intergenic | 45.0% |
| !! | GGATTTGACGGATTTAGCCT+GGG | - | chr1_3:70327628-70327647 | None:intergenic | 45.0% |
| GGAAGAGGAAGAAGAAGAAG+CGG | - | chr1_3:70327649-70327668 | None:intergenic | 45.0% | |
| !! | GGTGTCGCTGTGATATTCTT+GGG | - | chr1_3:70327762-70327781 | None:intergenic | 45.0% |
| !! | AGGTGTCGCTGTGATATTCT+TGG | - | chr1_3:70327763-70327782 | None:intergenic | 45.0% |
| TTTGCAAGCTTCTTCGCTTG+AGG | - | chr1_3:70327783-70327802 | None:intergenic | 45.0% | |
| GAAGCTTGCAAAGCAGCATA+AGG | + | chr1_3:70327791-70327810 | Msa0137710:CDS | 45.0% | |
| ATTGCATCAGTCAATGGGAC+TGG | + | chr1_3:70327819-70327838 | Msa0137710:CDS | 45.0% | |
| TCCGTTTGGTAGGATTACTC+CGG | + | chr1_3:70327842-70327861 | Msa0137710:CDS | 45.0% | |
| GGAGCTACATTACTCATCAC+CGG | - | chr1_3:70327897-70327916 | None:intergenic | 45.0% | |
| GGTGATGAGTAATGTAGCTC+CGG | + | chr1_3:70327896-70327915 | Msa0137710:CDS | 45.0% | |
| GCAGTAGAAGAACCACCTTT+AGG | - | chr1_3:70327945-70327964 | None:intergenic | 45.0% | |
| ACACTCAGTTTCTGTTGGAG+AGG | + | chr1_3:70328254-70328273 | Msa0137710:intron | 45.0% | |
| CCCAGAAAGAGGAAAACTCT+TGG | - | chr1_3:70328368-70328387 | None:intergenic | 45.0% | |
| !! | TGGGACTAGTCTTGCATCTT+TGG | + | chr1_3:70328384-70328403 | Msa0137710:CDS | 45.0% |
| !! | GTTTTGTTGAGAACAGGTGC+AGG | + | chr1_3:70328509-70328528 | Msa0137710:intron | 45.0% |
| TGCAGCCAAAAACACATGCA+GGG | - | chr1_3:70328849-70328868 | None:intergenic | 45.0% | |
| TTGCAGCCAAAAACACATGC+AGG | - | chr1_3:70328850-70328869 | None:intergenic | 45.0% | |
| !!! | TGTTTTTGGCTGCAAGCTAG+AGG | + | chr1_3:70328855-70328874 | Msa0137710:intron | 45.0% |
| AGCAGAGACAGAGTCAATTG+TGG | + | chr1_3:70329178-70329197 | Msa0137710:intron | 45.0% | |
| !! | GGGGAAGGAGTCTTGTTTAA+TGG | - | chr1_3:70329287-70329306 | None:intergenic | 45.0% |
| GAGGAGAGTGGTGAATTGAG+GGG | - | chr1_3:70327289-70327308 | None:intergenic | 50.0% | |
| GGAGGAGAGTGGTGAATTGA+GGG | - | chr1_3:70327290-70327309 | None:intergenic | 50.0% | |
| AGGAGGAGAGTGGTGAATTG+AGG | - | chr1_3:70327291-70327310 | None:intergenic | 50.0% | |
| AGGAAAAGGATTTGCGGGGA+GGG | - | chr1_3:70327329-70327348 | None:intergenic | 50.0% | |
| AAGGAAAAGGATTTGCGGGG+AGG | - | chr1_3:70327330-70327349 | None:intergenic | 50.0% | |
| ! | GTCATAGTGGAACTGAGTGC+AGG | - | chr1_3:70327387-70327406 | None:intergenic | 50.0% |
| ACTCAGTTCCACTATGACCG+AGG | + | chr1_3:70327389-70327408 | Msa0137710:CDS | 50.0% | |
| CTCAGTTCCACTATGACCGA+GGG | + | chr1_3:70327390-70327409 | Msa0137710:CDS | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1_3:70327406-70327425 | Msa0137710:CDS | 50.0% | |
| !! | TTTGGAGAGAGTGTCGCCTT+CGG | - | chr1_3:70327439-70327458 | None:intergenic | 50.0% |
| !! | CGGATTTGACGGATTTAGCC+TGG | - | chr1_3:70327629-70327648 | None:intergenic | 50.0% |
| GGAGACTGAGAAGTTTCCTG+AGG | - | chr1_3:70327690-70327709 | None:intergenic | 50.0% | |
| GCGGTTAAGTCTGTTTCCGA+TGG | + | chr1_3:70327735-70327754 | Msa0137710:CDS | 50.0% | |
| GCCGGAGTAATCCTACCAAA+CGG | - | chr1_3:70327846-70327865 | None:intergenic | 50.0% | |
| GTTTGGTAGGATTACTCCGG+CGG | + | chr1_3:70327845-70327864 | Msa0137710:CDS | 50.0% | |
| GATGAGTAATGTAGCTCCGG+TGG | + | chr1_3:70327899-70327918 | Msa0137710:CDS | 50.0% | |
| AGAAGAACCACCTTTAGGCG+CGG | - | chr1_3:70327940-70327959 | None:intergenic | 50.0% | |
| ! | ACTTGAGTTGTTGGTGGGGT+TGG | - | chr1_3:70328184-70328203 | None:intergenic | 50.0% |
| ! | GCAAGACTAGTCCCAGAAAG+AGG | - | chr1_3:70328379-70328398 | None:intergenic | 50.0% |
| GACAGAGAGGAAAAGAGCTG+TGG | + | chr1_3:70328786-70328805 | Msa0137710:intron | 50.0% | |
| GAGGAGAGTGGTGAATTGAG+GGG | - | chr1_3:70327289-70327308 | None:intergenic | 50.0% | |
| GGAGGAGAGTGGTGAATTGA+GGG | - | chr1_3:70327290-70327309 | None:intergenic | 50.0% | |
| AGGAGGAGAGTGGTGAATTG+AGG | - | chr1_3:70327291-70327310 | None:intergenic | 50.0% | |
| AGGAAAAGGATTTGCGGGGA+GGG | - | chr1_3:70327329-70327348 | None:intergenic | 50.0% | |
| AAGGAAAAGGATTTGCGGGG+AGG | - | chr1_3:70327330-70327349 | None:intergenic | 50.0% | |
| ! | GTCATAGTGGAACTGAGTGC+AGG | - | chr1_3:70327387-70327406 | None:intergenic | 50.0% |
| ACTCAGTTCCACTATGACCG+AGG | + | chr1_3:70327389-70327408 | Msa0137710:CDS | 50.0% | |
| CTCAGTTCCACTATGACCGA+GGG | + | chr1_3:70327390-70327409 | Msa0137710:CDS | 50.0% | |
| CCGAGGGTAAAATCGTCTCT+TGG | + | chr1_3:70327406-70327425 | Msa0137710:CDS | 50.0% | |
| !! | TTTGGAGAGAGTGTCGCCTT+CGG | - | chr1_3:70327439-70327458 | None:intergenic | 50.0% |
| !! | CGGATTTGACGGATTTAGCC+TGG | - | chr1_3:70327629-70327648 | None:intergenic | 50.0% |
| GGAGACTGAGAAGTTTCCTG+AGG | - | chr1_3:70327690-70327709 | None:intergenic | 50.0% | |
| GCGGTTAAGTCTGTTTCCGA+TGG | + | chr1_3:70327735-70327754 | Msa0137710:CDS | 50.0% | |
| GCCGGAGTAATCCTACCAAA+CGG | - | chr1_3:70327846-70327865 | None:intergenic | 50.0% | |
| GTTTGGTAGGATTACTCCGG+CGG | + | chr1_3:70327845-70327864 | Msa0137710:CDS | 50.0% | |
| GATGAGTAATGTAGCTCCGG+TGG | + | chr1_3:70327899-70327918 | Msa0137710:CDS | 50.0% | |
| AGAAGAACCACCTTTAGGCG+CGG | - | chr1_3:70327940-70327959 | None:intergenic | 50.0% | |
| ! | ACTTGAGTTGTTGGTGGGGT+TGG | - | chr1_3:70328184-70328203 | None:intergenic | 50.0% |
| ! | GCAAGACTAGTCCCAGAAAG+AGG | - | chr1_3:70328379-70328398 | None:intergenic | 50.0% |
| GACAGAGAGGAAAAGAGCTG+TGG | + | chr1_3:70328786-70328805 | Msa0137710:intron | 50.0% | |
| GGAAAAGGATTTGCGGGGAG+GGG | - | chr1_3:70327328-70327347 | None:intergenic | 55.0% | |
| GAAGGCGACACTCTCTCCAA+AGG | + | chr1_3:70327438-70327457 | Msa0137710:CDS | 55.0% | |
| GCCTTCGTCGACAACGATAG+CGG | - | chr1_3:70327535-70327554 | None:intergenic | 55.0% | |
| TATCGCTGAAGCTCAAGCCC+AGG | + | chr1_3:70327608-70327627 | Msa0137710:CDS | 55.0% | |
| TTCCTCTTCCTCTCCTCCTC+CGG | + | chr1_3:70327659-70327678 | Msa0137710:CDS | 55.0% | |
| GAAGTTTCCTGAGGAGTCGC+CGG | - | chr1_3:70327681-70327700 | None:intergenic | 55.0% | |
| GAAACAGACTTAACCGCCGC+CGG | - | chr1_3:70327732-70327751 | None:intergenic | 55.0% | |
| !! | GTCAATGGGACTGGTCCGTT+TGG | + | chr1_3:70327828-70327847 | Msa0137710:CDS | 55.0% |
| !! | ATGGGACTGGTCCGTTTGGT+AGG | + | chr1_3:70327832-70327851 | Msa0137710:CDS | 55.0% |
| TAGGATTACTCCGGCGGATG+TGG | + | chr1_3:70327851-70327870 | Msa0137710:CDS | 55.0% | |
| GGAGTCTTTGTCACTGCCAC+TGG | + | chr1_3:70328405-70328424 | Msa0137710:CDS | 55.0% | |
| GTCAGCAACTCTCTTCTGGC+AGG | - | chr1_3:70328568-70328587 | None:intergenic | 55.0% | |
| CGGATATTCCGCTCATCCAG+TGG | + | chr1_3:70329326-70329345 | Msa0137710:CDS | 55.0% | |
| GGAAAAGGATTTGCGGGGAG+GGG | - | chr1_3:70327328-70327347 | None:intergenic | 55.0% | |
| GAAGGCGACACTCTCTCCAA+AGG | + | chr1_3:70327438-70327457 | Msa0137710:CDS | 55.0% | |
| GCCTTCGTCGACAACGATAG+CGG | - | chr1_3:70327535-70327554 | None:intergenic | 55.0% | |
| TATCGCTGAAGCTCAAGCCC+AGG | + | chr1_3:70327608-70327627 | Msa0137710:CDS | 55.0% | |
| TTCCTCTTCCTCTCCTCCTC+CGG | + | chr1_3:70327659-70327678 | Msa0137710:CDS | 55.0% | |
| GAAGTTTCCTGAGGAGTCGC+CGG | - | chr1_3:70327681-70327700 | None:intergenic | 55.0% | |
| GAAACAGACTTAACCGCCGC+CGG | - | chr1_3:70327732-70327751 | None:intergenic | 55.0% | |
| !! | GTCAATGGGACTGGTCCGTT+TGG | + | chr1_3:70327828-70327847 | Msa0137710:CDS | 55.0% |
| !! | ATGGGACTGGTCCGTTTGGT+AGG | + | chr1_3:70327832-70327851 | Msa0137710:CDS | 55.0% |
| TAGGATTACTCCGGCGGATG+TGG | + | chr1_3:70327851-70327870 | Msa0137710:CDS | 55.0% | |
| GGAGTCTTTGTCACTGCCAC+TGG | + | chr1_3:70328405-70328424 | Msa0137710:CDS | 55.0% | |
| GTCAGCAACTCTCTTCTGGC+AGG | - | chr1_3:70328568-70328587 | None:intergenic | 55.0% | |
| CGGATATTCCGCTCATCCAG+TGG | + | chr1_3:70329326-70329345 | Msa0137710:CDS | 55.0% | |
| AAAGGATTTGCGGGGAGGGG+AGG | - | chr1_3:70327325-70327344 | None:intergenic | 60.0% | |
| GCCGCTATCGTTGTCGACGA+AGG | + | chr1_3:70327531-70327550 | Msa0137710:CDS | 60.0% | |
| CGACGAAGGCGAAACAGCTC+CGG | + | chr1_3:70327545-70327564 | Msa0137710:CDS | 60.0% | |
| GAAGGCGAAACAGCTCCGGT+TGG | + | chr1_3:70327549-70327568 | Msa0137710:CDS | 60.0% | |
| ! | GCTCCGGTTGGTGCTCCAAT+TGG | + | chr1_3:70327561-70327580 | Msa0137710:CDS | 60.0% |
| GATTACTCCGGCGGATGTGG+AGG | + | chr1_3:70327854-70327873 | Msa0137710:CDS | 60.0% | |
| GGCTGCTGCTGGGATTACAC+CGG | + | chr1_3:70327875-70327894 | Msa0137710:CDS | 60.0% | |
| GAACCACCTTTAGGCGCGGT+GGG | - | chr1_3:70327936-70327955 | None:intergenic | 60.0% | |
| AGAACCACCTTTAGGCGCGG+TGG | - | chr1_3:70327937-70327956 | None:intergenic | 60.0% | |
| TGCTGCACCAGCTGCGATTC+CGG | + | chr1_3:70327962-70327981 | Msa0137710:CDS | 60.0% | |
| AAAGGATTTGCGGGGAGGGG+AGG | - | chr1_3:70327325-70327344 | None:intergenic | 60.0% | |
| GCCGCTATCGTTGTCGACGA+AGG | + | chr1_3:70327531-70327550 | Msa0137710:CDS | 60.0% | |
| CGACGAAGGCGAAACAGCTC+CGG | + | chr1_3:70327545-70327564 | Msa0137710:CDS | 60.0% | |
| GAAGGCGAAACAGCTCCGGT+TGG | + | chr1_3:70327549-70327568 | Msa0137710:CDS | 60.0% | |
| ! | GCTCCGGTTGGTGCTCCAAT+TGG | + | chr1_3:70327561-70327580 | Msa0137710:CDS | 60.0% |
| GATTACTCCGGCGGATGTGG+AGG | + | chr1_3:70327854-70327873 | Msa0137710:CDS | 60.0% | |
| GGCTGCTGCTGGGATTACAC+CGG | + | chr1_3:70327875-70327894 | Msa0137710:CDS | 60.0% | |
| GAACCACCTTTAGGCGCGGT+GGG | - | chr1_3:70327936-70327955 | None:intergenic | 60.0% | |
| AGAACCACCTTTAGGCGCGG+TGG | - | chr1_3:70327937-70327956 | None:intergenic | 60.0% | |
| TGCTGCACCAGCTGCGATTC+CGG | + | chr1_3:70327962-70327981 | Msa0137710:CDS | 60.0% | |
| ATTTGCGGGGAGGGGAGGAG+CGG | - | chr1_3:70327320-70327339 | None:intergenic | 65.0% | |
| GTTTCCTGAGGAGTCGCCGG+AGG | - | chr1_3:70327678-70327697 | None:intergenic | 65.0% | |
| ACAGACTTAACCGCCGCCGG+TGG | - | chr1_3:70327729-70327748 | None:intergenic | 65.0% | |
| CGGATGTGGAGGCTGCTGCT+GGG | + | chr1_3:70327865-70327884 | Msa0137710:CDS | 65.0% | |
| GCTGCACCAGCTGCGATTCC+GGG | + | chr1_3:70327963-70327982 | Msa0137710:CDS | 65.0% | |
| CTCGAACCCGGAATCGCAGC+TGG | - | chr1_3:70327972-70327991 | None:intergenic | 65.0% | |
| ATTTGCGGGGAGGGGAGGAG+CGG | - | chr1_3:70327320-70327339 | None:intergenic | 65.0% | |
| GTTTCCTGAGGAGTCGCCGG+AGG | - | chr1_3:70327678-70327697 | None:intergenic | 65.0% | |
| ACAGACTTAACCGCCGCCGG+TGG | - | chr1_3:70327729-70327748 | None:intergenic | 65.0% | |
| CGGATGTGGAGGCTGCTGCT+GGG | + | chr1_3:70327865-70327884 | Msa0137710:CDS | 65.0% | |
| GCTGCACCAGCTGCGATTCC+GGG | + | chr1_3:70327963-70327982 | Msa0137710:CDS | 65.0% | |
| CTCGAACCCGGAATCGCAGC+TGG | - | chr1_3:70327972-70327991 | None:intergenic | 65.0% | |
| GCGGTGAGGGAGGAGGAGAG+TGG | - | chr1_3:70327301-70327320 | None:intergenic | 70.0% | |
| CGCCGGAGGAGGAGAGGAAG+AGG | - | chr1_3:70327664-70327683 | None:intergenic | 70.0% | |
| AGGAGTCGCCGGAGGAGGAG+AGG | - | chr1_3:70327670-70327689 | None:intergenic | 70.0% | |
| TCCTCCTCCGGCGACTCCTC+AGG | + | chr1_3:70327671-70327690 | Msa0137710:CDS | 70.0% | |
| TCCTGAGGAGTCGCCGGAGG+AGG | - | chr1_3:70327675-70327694 | None:intergenic | 70.0% | |
| TCCTCCACCACCGCCTCCAC+CGG | + | chr1_3:70327710-70327729 | Msa0137710:CDS | 70.0% | |
| TTAACCGCCGCCGGTGGAGG+CGG | - | chr1_3:70327723-70327742 | None:intergenic | 70.0% | |
| GACTTAACCGCCGCCGGTGG+AGG | - | chr1_3:70327726-70327745 | None:intergenic | 70.0% | |
| GCAGCAGCCTCCACATCCGC+CGG | - | chr1_3:70327864-70327883 | None:intergenic | 70.0% | |
| GCGGATGTGGAGGCTGCTGC+TGG | + | chr1_3:70327864-70327883 | Msa0137710:CDS | 70.0% | |
| GTGGGAGCAGGAGTCGCCAC+CGG | - | chr1_3:70327918-70327937 | None:intergenic | 70.0% | |
| CCTTTAGGCGCGGTGGGAGC+AGG | - | chr1_3:70327930-70327949 | None:intergenic | 70.0% | |
| CCTGCTCCCACCGCGCCTAA+AGG | + | chr1_3:70327927-70327946 | Msa0137710:CDS | 70.0% | |
| GCTCCCACCGCGCCTAAAGG+TGG | + | chr1_3:70327930-70327949 | Msa0137710:CDS | 70.0% | |
| GCGGTGAGGGAGGAGGAGAG+TGG | - | chr1_3:70327301-70327320 | None:intergenic | 70.0% | |
| CGCCGGAGGAGGAGAGGAAG+AGG | - | chr1_3:70327664-70327683 | None:intergenic | 70.0% | |
| AGGAGTCGCCGGAGGAGGAG+AGG | - | chr1_3:70327670-70327689 | None:intergenic | 70.0% | |
| TCCTCCTCCGGCGACTCCTC+AGG | + | chr1_3:70327671-70327690 | Msa0137710:CDS | 70.0% | |
| TCCTGAGGAGTCGCCGGAGG+AGG | - | chr1_3:70327675-70327694 | None:intergenic | 70.0% | |
| TCCTCCACCACCGCCTCCAC+CGG | + | chr1_3:70327710-70327729 | Msa0137710:CDS | 70.0% | |
| TTAACCGCCGCCGGTGGAGG+CGG | - | chr1_3:70327723-70327742 | None:intergenic | 70.0% | |
| GACTTAACCGCCGCCGGTGG+AGG | - | chr1_3:70327726-70327745 | None:intergenic | 70.0% | |
| GCAGCAGCCTCCACATCCGC+CGG | - | chr1_3:70327864-70327883 | None:intergenic | 70.0% | |
| GCGGATGTGGAGGCTGCTGC+TGG | + | chr1_3:70327864-70327883 | Msa0137710:CDS | 70.0% | |
| GTGGGAGCAGGAGTCGCCAC+CGG | - | chr1_3:70327918-70327937 | None:intergenic | 70.0% | |
| CCTTTAGGCGCGGTGGGAGC+AGG | - | chr1_3:70327930-70327949 | None:intergenic | 70.0% | |
| CCTGCTCCCACCGCGCCTAA+AGG | + | chr1_3:70327927-70327946 | Msa0137710:CDS | 70.0% | |
| GCTCCCACCGCGCCTAAAGG+TGG | + | chr1_3:70327930-70327949 | Msa0137710:CDS | 70.0% | |
| GGGAGGAGCGGTGAGGGAGG+AGG | - | chr1_3:70327308-70327327 | None:intergenic | 75.0% | |
| GAGGGGAGGAGCGGTGAGGG+AGG | - | chr1_3:70327311-70327330 | None:intergenic | 75.0% | |
| GGGGAGGGGAGGAGCGGTGA+GGG | - | chr1_3:70327314-70327333 | None:intergenic | 75.0% | |
| !! | GGTGGAGGCGGTGGTGGAGG+AGG | - | chr1_3:70327711-70327730 | None:intergenic | 75.0% |
| TCCACCACCGCCTCCACCGG+CGG | + | chr1_3:70327713-70327732 | Msa0137710:CDS | 75.0% | |
| GGGAGGAGCGGTGAGGGAGG+AGG | - | chr1_3:70327308-70327327 | None:intergenic | 75.0% | |
| GAGGGGAGGAGCGGTGAGGG+AGG | - | chr1_3:70327311-70327330 | None:intergenic | 75.0% | |
| GGGGAGGGGAGGAGCGGTGA+GGG | - | chr1_3:70327314-70327333 | None:intergenic | 75.0% | |
| !! | GGTGGAGGCGGTGGTGGAGG+AGG | - | chr1_3:70327711-70327730 | None:intergenic | 75.0% |
| TCCACCACCGCCTCCACCGG+CGG | + | chr1_3:70327713-70327732 | Msa0137710:CDS | 75.0% | |
| ! | CGGGGAGGGGAGGAGCGGTG+AGG | - | chr1_3:70327315-70327334 | None:intergenic | 80.0% |
| !! | GCCGGTGGAGGCGGTGGTGG+AGG | - | chr1_3:70327714-70327733 | None:intergenic | 80.0% |
| ! | ACCACCGCCTCCACCGGCGG+CGG | + | chr1_3:70327716-70327735 | Msa0137710:CDS | 80.0% |
| ! | CGGGGAGGGGAGGAGCGGTG+AGG | - | chr1_3:70327315-70327334 | None:intergenic | 80.0% |
| !! | GCCGGTGGAGGCGGTGGTGG+AGG | - | chr1_3:70327714-70327733 | None:intergenic | 80.0% |
| ! | ACCACCGCCTCCACCGGCGG+CGG | + | chr1_3:70327716-70327735 | Msa0137710:CDS | 80.0% |
| ! | GCCGCCGGTGGAGGCGGTGG+TGG | - | chr1_3:70327717-70327736 | None:intergenic | 85.0% |
| ! | ACCGCCGCCGGTGGAGGCGG+TGG | - | chr1_3:70327720-70327739 | None:intergenic | 85.0% |
| ! | GCCGCCGGTGGAGGCGGTGG+TGG | - | chr1_3:70327717-70327736 | None:intergenic | 85.0% |
| ! | ACCGCCGCCGGTGGAGGCGG+TGG | - | chr1_3:70327720-70327739 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 70327231 | 70329531 | 70327231 | ID=Msa0137710;Name=Msa0137710 |
| chr1_3 | mRNA | 70327231 | 70329531 | 70327231 | ID=Msa0137710-mRNA-1;Parent=Msa0137710;Name=Msa0137710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.33|0.25|1|1|1|4|179|414 |
| chr1_3 | exon | 70327231 | 70328052 | 70327231 | ID=Msa0137710-mRNA-1:exon:24332;Parent=Msa0137710-mRNA-1 |
| chr1_3 | exon | 70328262 | 70328426 | 70328262 | ID=Msa0137710-mRNA-1:exon:24333;Parent=Msa0137710-mRNA-1 |
| chr1_3 | exon | 70328525 | 70328609 | 70328525 | ID=Msa0137710-mRNA-1:exon:24334;Parent=Msa0137710-mRNA-1 |
| chr1_3 | exon | 70329180 | 70329531 | 70329180 | ID=Msa0137710-mRNA-1:exon:24335;Parent=Msa0137710-mRNA-1 |
| chr1_3 | CDS | 70327231 | 70328052 | 70327231 | ID=Msa0137710-mRNA-1:cds;Parent=Msa0137710-mRNA-1 |
| chr1_3 | CDS | 70328262 | 70328426 | 70328262 | ID=Msa0137710-mRNA-1:cds;Parent=Msa0137710-mRNA-1 |
| chr1_3 | CDS | 70328525 | 70328609 | 70328525 | ID=Msa0137710-mRNA-1:cds;Parent=Msa0137710-mRNA-1 |
| chr1_3 | CDS | 70329180 | 70329352 | 70329180 | ID=Msa0137710-mRNA-1:cds;Parent=Msa0137710-mRNA-1 |
| chr1_3 | three_prime_UTR | 70329353 | 70329531 | 70329353 | ID=Msa0137710-mRNA-1:three_prime_utr;Parent=Msa0137710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
