Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460400 | XP_003600690.1 | 98.381 | 741 | 10 | 1 | 56 | 796 | 1 | 739 | 0.0 | 1504 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460400 | sp|Q43644|NDUS1_SOLTU | 80.593 | 742 | 138 | 2 | 56 | 795 | 1 | 738 | 0.0 | 1256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460400 | G7J8R4 | 98.381 | 741 | 10 | 1 | 56 | 796 | 1 | 739 | 0.0 | 1504 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0460400 | 0.801880 | 7.307872e-49 | -8.615850e-47 |
| Msa0030150 | Msa0460400 | 0.807088 | 5.996661e-50 | -8.615850e-47 |
| Msa0054750 | Msa0460400 | -0.812652 | 3.806523e-51 | -8.615850e-47 |
| Msa0057680 | Msa0460400 | 0.814274 | 1.674572e-51 | -8.615850e-47 |
| Msa0063350 | Msa0460400 | 0.813186 | 2.907466e-51 | -8.615850e-47 |
| Msa0076320 | Msa0460400 | -0.809830 | 1.558837e-50 | -8.615850e-47 |
| Msa0125640 | Msa0460400 | 0.810273 | 1.251206e-50 | -8.615850e-47 |
| Msa0129190 | Msa0460400 | 0.810777 | 9.738811e-51 | -8.615850e-47 |
| Msa0136890 | Msa0460400 | 0.841664 | 4.143814e-58 | -8.615850e-47 |
| Msa0137710 | Msa0460400 | 0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa0162130 | Msa0460400 | -0.805077 | 1.588879e-49 | -8.615850e-47 |
| Msa0170110 | Msa0460400 | 0.822783 | 1.969137e-53 | -8.615850e-47 |
| Msa0189520 | Msa0460400 | -0.822091 | 2.851337e-53 | -8.615850e-47 |
| Msa0229490 | Msa0460400 | 0.817901 | 2.592259e-52 | -8.615850e-47 |
| Msa0233630 | Msa0460400 | 0.837875 | 4.014740e-57 | -8.615850e-47 |
| Msa0380100 | Msa0460400 | -0.800371 | 1.487185e-48 | -8.615850e-47 |
| Msa0389610 | Msa0460400 | 0.836603 | 8.494343e-57 | -8.615850e-47 |
| Msa0394340 | Msa0460400 | -0.805605 | 1.231238e-49 | -8.615850e-47 |
| Msa0412840 | Msa0460400 | -0.807836 | 4.161044e-50 | -8.615850e-47 |
| Msa0457510 | Msa0460400 | -0.834584 | 2.754205e-56 | -8.615850e-47 |
| Msa0460400 | Msa0472960 | 0.819561 | 1.088523e-52 | -8.615850e-47 |
| Msa0460400 | Msa0528020 | 0.983107 | 7.558860e-157 | -8.615850e-47 |
| Msa0460400 | Msa0528610 | 0.815899 | 7.297997e-52 | -8.615850e-47 |
| Msa0460400 | Msa0553220 | 0.800802 | 1.214913e-48 | -8.615850e-47 |
| Msa0460400 | Msa0588260 | -0.811865 | 5.653687e-51 | -8.615850e-47 |
| Msa0460400 | Msa0661190 | 0.824352 | 8.454738e-54 | -8.615850e-47 |
| Msa0460400 | Msa0661210 | -0.808925 | 2.436899e-50 | -8.615850e-47 |
| Msa0460400 | Msa0867520 | 0.848191 | 7.171083e-60 | -8.615850e-47 |
| Msa0460400 | Msa0942550 | 0.843177 | 1.644400e-58 | -8.615850e-47 |
| Msa0460400 | Msa0942560 | 0.826597 | 2.486429e-54 | -8.615850e-47 |
| Msa0460400 | Msa0946280 | 0.815214 | 1.036923e-51 | -8.615850e-47 |
| Msa0460400 | Msa0989470 | 0.800221 | 1.595408e-48 | -8.615850e-47 |
| Msa0460400 | Msa0999050 | 0.816560 | 5.193585e-52 | -8.615850e-47 |
| Msa0460400 | Msa1029080 | 0.830027 | 3.699284e-55 | -8.615850e-47 |
| Msa0460400 | Msa1063510 | -0.810159 | 1.324148e-50 | -8.615850e-47 |
| Msa0460400 | Msa1081790 | 0.808002 | 3.835653e-50 | -8.615850e-47 |
| Msa0460400 | Msa1133230 | -0.819483 | 1.134100e-52 | -8.615850e-47 |
| Msa0460400 | Msa1156170 | 0.827597 | 1.433101e-54 | -8.615850e-47 |
| Msa0460400 | Msa1166090 | 0.817822 | 2.701437e-52 | -8.615850e-47 |
| Msa0460400 | Msa1176720 | -0.808229 | 3.431173e-50 | -8.615850e-47 |
| Msa0460400 | Msa1191050 | 0.811467 | 6.900620e-51 | -8.615850e-47 |
| Msa0460400 | Msa1191890 | 0.835015 | 2.145769e-56 | -8.615850e-47 |
| Msa0460400 | Msa1201430 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0460400 | Msa1244720 | 0.818054 | 2.394654e-52 | -8.615850e-47 |
| Msa0460400 | Msa1254370 | 0.802256 | 6.114495e-49 | -8.615850e-47 |
| Msa0460400 | Msa1284340 | 0.806468 | 8.106601e-50 | -8.615850e-47 |
| Msa0460400 | Msa1294610 | 0.807293 | 5.425350e-50 | -8.615850e-47 |
| Msa0460400 | Msa1325860 | 0.815398 | 9.437765e-52 | -8.615850e-47 |
| Msa0460400 | Msa1332040 | 0.817724 | 2.842923e-52 | -8.615850e-47 |
| Msa0460400 | Msa1359630 | -0.820774 | 5.741680e-53 | -8.615850e-47 |
| Msa0460400 | Msa1361280 | 0.850640 | 1.490279e-60 | -8.615850e-47 |
| Msa0460400 | Msa1365700 | 0.851796 | 7.027491e-61 | -8.615850e-47 |
| Msa0460400 | Msa1396400 | 0.819006 | 1.456659e-52 | -8.615850e-47 |
| Msa0460400 | Msa1403340 | -0.826860 | 2.151472e-54 | -8.615850e-47 |
| Msa0460400 | Msa1445950 | 0.805089 | 1.579590e-49 | -8.615850e-47 |
| Msa0460400 | Msa1453780 | 0.812289 | 4.568736e-51 | -8.615850e-47 |
| Msa0295330 | Msa0460400 | -0.807974 | 3.887860e-50 | -8.615850e-47 |
| Msa0306210 | Msa0460400 | 0.803089 | 4.117092e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460400 | MtrunA17_Chr3g0110161 | 98.381 | 741 | 10 | 1 | 56 | 796 | 1 | 739 | 0.0 | 1504 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460400 | AT5G37510.1 | 78.523 | 745 | 156 | 1 | 56 | 796 | 1 | 745 | 0.0 | 1212 |
| Msa0460400 | AT5G37510.2 | 78.523 | 745 | 156 | 1 | 56 | 796 | 1 | 745 | 0.0 | 1212 |
Find 246 sgRNAs with CRISPR-Local
Find 549 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTCCTTCTCGTGCTTTCT+TGG | 0.148903 | 3_3:-57717303 | None:intergenic |
| TGCAAAGTTTGTATATTTAA+TGG | 0.190393 | 3_3:+57721713 | Msa0460400:CDS |
| TTTGAAATAGTCTTGGAAAA+TGG | 0.193927 | 3_3:-57721483 | None:intergenic |
| GTACGATATGATTTGAAATT+AGG | 0.200909 | 3_3:+57722310 | Msa0460400:three_prime_UTR |
| TCTCCACCCTGATCACAAAT+TGG | 0.219635 | 3_3:-57717362 | None:intergenic |
| GAAGAAATTGTTGGAATATC+TGG | 0.232864 | 3_3:+57720822 | Msa0460400:CDS |
| TAGATCTGTGTTGTTGATTT+GGG | 0.239867 | 3_3:-57715568 | None:intergenic |
| TGCGCCATGCCCGCTCTTCC+TGG | 0.245156 | 3_3:+57715993 | Msa0460400:CDS |
| TTGGGGCTGAGCGGCGGGTT+CGG | 0.245373 | 3_3:-57715709 | None:intergenic |
| GAGGAGGAGGCGGGTGGTGG+TGG | 0.250324 | 3_3:-57715649 | None:intergenic |
| TTAGATCTGTGTTGTTGATT+TGG | 0.281459 | 3_3:-57715569 | None:intergenic |
| TGGGGCTGAGCGGCGGGTTC+GGG | 0.281624 | 3_3:-57715708 | None:intergenic |
| TATTCTTCAACTCCCAATTC+CGG | 0.285395 | 3_3:-57718233 | None:intergenic |
| GAGGAGGCGGGTGGTGGTGG+TGG | 0.291433 | 3_3:-57715646 | None:intergenic |
| TTGCATTTAAAGCCCGGAAT+TGG | 0.299665 | 3_3:+57718220 | Msa0460400:CDS |
| ATAAACCAAACCCCATTGTT+AGG | 0.307081 | 3_3:-57715599 | None:intergenic |
| CATAGCAGACTTTCCATTGC+TGG | 0.307168 | 3_3:+57715915 | Msa0460400:CDS |
| GGGTTCGGGTTTGCGGAGTT+CGG | 0.321764 | 3_3:-57715694 | None:intergenic |
| AATGGTGATGCGAGTGTATA+TGG | 0.321818 | 3_3:-57715542 | None:intergenic |
| GACGAGAGGTTGTTCAGGTT+GGG | 0.322345 | 3_3:-57715727 | None:intergenic |
| GCAAAGTTTGTATATTTAAT+GGG | 0.327097 | 3_3:+57721714 | Msa0460400:CDS |
| TCTCGTGCTTTCTTGGCTAT+AGG | 0.335594 | 3_3:-57717296 | None:intergenic |
| TCTGCTATCAATACGAATAT+TGG | 0.336308 | 3_3:-57718289 | None:intergenic |
| GATATTCCAACAATTTCTTC+TGG | 0.338173 | 3_3:-57720819 | None:intergenic |
| GGGTGGAGAGTGTGATCTTC+AGG | 0.340342 | 3_3:+57717376 | Msa0460400:CDS |
| TTGAAATAGTCTTGGAAAAT+GGG | 0.343715 | 3_3:-57721482 | None:intergenic |
| ATACAAACTTTGCAGATTCA+AGG | 0.344116 | 3_3:-57721704 | None:intergenic |
| CGTTTACCCTATGATACAAT+TGG | 0.350227 | 3_3:+57721981 | Msa0460400:CDS |
| GGTTCGGGTTTGCGGAGTTC+GGG | 0.354183 | 3_3:-57715693 | None:intergenic |
| CCATCAGGACCACGAATCAT+AGG | 0.356983 | 3_3:-57720729 | None:intergenic |
| GGATGATCCGATTTCAGATT+CGG | 0.358068 | 3_3:-57715466 | None:intergenic |
| GTTCAGGATCTTGGCATGTT+AGG | 0.371949 | 3_3:+57718087 | Msa0460400:CDS |
| GGCACAATGCGCATGACTTC+AGG | 0.374783 | 3_3:-57718315 | None:intergenic |
| CTGGCGTGAAGCCCTTTCTT+TGG | 0.376057 | 3_3:+57720770 | Msa0460400:CDS |
| ATTCTTCAACTCCCAATTCC+GGG | 0.378095 | 3_3:-57718232 | None:intergenic |
| CACTAAAAGATTTCTTAAAC+AGG | 0.378664 | 3_3:+57720874 | Msa0460400:CDS |
| CCAGCACCAACAATGATAAC+AGG | 0.379076 | 3_3:-57721516 | None:intergenic |
| GTTGCAGGGGTTCAGGATCT+TGG | 0.379251 | 3_3:+57718078 | Msa0460400:CDS |
| TCGATAGCGTCATCGGGATT+GGG | 0.379722 | 3_3:-57715795 | None:intergenic |
| GAGGAGGAGGAGGCGGGTGG+TGG | 0.381251 | 3_3:-57715652 | None:intergenic |
| TCACAAATTGGGCAATCTAA+TGG | 0.385374 | 3_3:-57717350 | None:intergenic |
| TCAGGTTGGGGCTGAGCGGC+GGG | 0.387179 | 3_3:-57715714 | None:intergenic |
| CTCGATAGCGTCATCGGGAT+TGG | 0.388965 | 3_3:-57715796 | None:intergenic |
| GGGTTTGCGGAGTTCGGGTT+TGG | 0.389818 | 3_3:-57715688 | None:intergenic |
| CAGGCTGCTGCACTTGACCT+TGG | 0.391023 | 3_3:+57721657 | Msa0460400:CDS |
| AGATTGCCCAATTTGTGATC+AGG | 0.398118 | 3_3:+57717355 | Msa0460400:CDS |
| GTTGGAAAACATATGATAAA+CGG | 0.398234 | 3_3:+57715429 | None:intergenic |
| CAGGATCAGTCAATGGCATT+TGG | 0.398437 | 3_3:+57717395 | Msa0460400:CDS |
| ATTATGAATACTAGCATTGC+TGG | 0.399661 | 3_3:+57720966 | Msa0460400:CDS |
| CTTCAAGCGTGTGAGGTTGC+TGG | 0.401893 | 3_3:+57715867 | Msa0460400:CDS |
| CATGGAGAAGTAATACATTA+AGG | 0.402841 | 3_3:-57721629 | None:intergenic |
| TACCAGGGCATCAAAGATAA+TGG | 0.403072 | 3_3:+57722166 | Msa0460400:CDS |
| ATCAGAGGTTGCAGGGGTTC+AGG | 0.403687 | 3_3:+57718071 | Msa0460400:CDS |
| CTGCTATGATAACAAAATCT+AGG | 0.407506 | 3_3:-57715900 | None:intergenic |
| AAAAGATTTCTTAAACAGGC+TGG | 0.409928 | 3_3:+57720878 | Msa0460400:CDS |
| TCGTCCATTTGCGCAAGGTT+TGG | 0.410243 | 3_3:-57722035 | None:intergenic |
| TGCATTTAAAGCCCGGAATT+GGG | 0.411080 | 3_3:+57718221 | Msa0460400:CDS |
| GTTTACCCTATGATACAATT+GGG | 0.415159 | 3_3:+57721982 | Msa0460400:CDS |
| GTTAAACCAGAAGAAATTGT+TGG | 0.417305 | 3_3:+57720813 | Msa0460400:CDS |
| TCCACCCTAACAATGGGGTT+TGG | 0.419261 | 3_3:+57715594 | Msa0460400:CDS |
| AATGTATGGGGCGAAGGAAT+TGG | 0.421514 | 3_3:+57720909 | Msa0460400:CDS |
| GAGCGGCGGGTTCGGGTTTG+CGG | 0.422300 | 3_3:-57715701 | None:intergenic |
| AGCGCCAAACCTTGCGCAAA+TGG | 0.424180 | 3_3:+57722031 | Msa0460400:CDS |
| TGGAGAGTGGGGTGAGAGGG+TGG | 0.424206 | 3_3:-57715522 | None:intergenic |
| TTCAGGTTGGGGCTGAGCGG+CGG | 0.426747 | 3_3:-57715715 | None:intergenic |
| AGGTGGATCCATCACCATTC+GGG | 0.428089 | 3_3:+57722108 | Msa0460400:CDS |
| GGCTGGGGTCAAATAATGTA+TGG | 0.432511 | 3_3:+57720895 | Msa0460400:CDS |
| AGCGCCAGCGACGGGTGTAC+GGG | 0.434794 | 3_3:-57715760 | None:intergenic |
| GCGCAAGAAGCAACAGGCTT+AGG | 0.435847 | 3_3:-57715975 | None:intergenic |
| TTGGAAAACATATGATAAAC+GGG | 0.436201 | 3_3:+57715430 | None:intergenic |
| AATTATCTTCCAATCATCTC+TGG | 0.439607 | 3_3:-57721931 | None:intergenic |
| AGATCGACGAGAGGTTGTTC+AGG | 0.439627 | 3_3:-57715732 | None:intergenic |
| AAACAACAAAAGCATCCTTC+GGG | 0.441280 | 3_3:-57721764 | None:intergenic |
| GATGATCCGATTTCAGATTC+GGG | 0.442991 | 3_3:-57715465 | None:intergenic |
| AGCCATTATCTTTGATGCCC+TGG | 0.443739 | 3_3:-57722168 | None:intergenic |
| AAAGATTTCTTAAACAGGCT+GGG | 0.445416 | 3_3:+57720879 | Msa0460400:CDS |
| AGCAAACCCGAATCTGAAAT+CGG | 0.445881 | 3_3:+57715459 | Msa0460400:CDS |
| TTCTCACTGAATGCAGCTGC+TGG | 0.446093 | 3_3:-57721837 | None:intergenic |
| CGACGAGAGGTTGTTCAGGT+TGG | 0.449270 | 3_3:-57715728 | None:intergenic |
| ACTAATGCTGATTTCAGATC+AGG | 0.449684 | 3_3:+57720939 | Msa0460400:CDS |
| CAAGGTCAAGTGCAGCAGCC+TGG | 0.450413 | 3_3:-57721656 | None:intergenic |
| CTCTCTCGTCCATTTGCGCA+AGG | 0.451054 | 3_3:-57722040 | None:intergenic |
| TTTGGCATTTGAAATAGTCT+TGG | 0.453444 | 3_3:-57721490 | None:intergenic |
| TGAAGAACAGAGAATCCTTT+CGG | 0.453943 | 3_3:-57715849 | None:intergenic |
| AACTATGATAACGAACATCT+TGG | 0.457876 | 3_3:+57721417 | Msa0460400:CDS |
| TTGAACGGAGGAGGAGGAGG+CGG | 0.458930 | 3_3:-57715659 | None:intergenic |
| TAAACAACAAAAGCATCCTT+CGG | 0.459831 | 3_3:-57721765 | None:intergenic |
| TTCCGGGCTTTAAATGCAAA+AGG | 0.460040 | 3_3:-57718216 | None:intergenic |
| GCAATTTCAAGAAGTGTTTG+AGG | 0.460236 | 3_3:-57721447 | None:intergenic |
| TCTCCAACTGTTGGAACTGC+AGG | 0.461407 | 3_3:-57721906 | None:intergenic |
| TTACACCAGCAAAATACAAA+TGG | 0.461758 | 3_3:-57722344 | None:intergenic |
| CTCCACCCTGATCACAAATT+GGG | 0.462587 | 3_3:-57717361 | None:intergenic |
| GGCATGGCGCAAGAAGCAAC+AGG | 0.463187 | 3_3:-57715981 | None:intergenic |
| TGGTGGTGATTGAACGGAGG+AGG | 0.463432 | 3_3:-57715668 | None:intergenic |
| TAGCGCCAGCGACGGGTGTA+CGG | 0.465790 | 3_3:-57715761 | None:intergenic |
| CAAGCCAAGGTCGGTTACAT+TGG | 0.466458 | 3_3:+57721378 | Msa0460400:CDS |
| CTAACATCCACCCTAACAAT+GGG | 0.466724 | 3_3:+57715588 | Msa0460400:CDS |
| CCTGTTATCATTGTTGGTGC+TGG | 0.468259 | 3_3:+57721516 | Msa0460400:CDS |
| CGAGCTCTGTCCGAGATAGC+AGG | 0.468342 | 3_3:+57721954 | Msa0460400:CDS |
| CTGTTATCATTGTTGGTGCT+GGG | 0.468439 | 3_3:+57721517 | Msa0460400:CDS |
| ACAGGCTTAAAGCGGCCATC+AGG | 0.470321 | 3_3:-57720744 | None:intergenic |
| GAAAACCTCGATAGCGTCAT+CGG | 0.473854 | 3_3:-57715802 | None:intergenic |
| TGGTGATTGAACGGAGGAGG+AGG | 0.476683 | 3_3:-57715665 | None:intergenic |
| CAACCTCTGCTACCAAAGAA+AGG | 0.479683 | 3_3:-57720782 | None:intergenic |
| AAGGTGGATCCATCACCATT+CGG | 0.479718 | 3_3:+57722107 | Msa0460400:CDS |
| CTCTGTTCTTCAAGCGTGTG+AGG | 0.480791 | 3_3:+57715860 | Msa0460400:CDS |
| TAAACGCACCCCTGCTATCT+CGG | 0.480951 | 3_3:-57721964 | None:intergenic |
| AAGGTCAAGTGCAGCAGCCT+GGG | 0.483480 | 3_3:-57721655 | None:intergenic |
| GCCGCTTTAAGCCTGTGAAC+TGG | 0.484016 | 3_3:+57720751 | Msa0460400:CDS |
| AAGCCAAGGTCGGTTACATT+GGG | 0.484241 | 3_3:+57721379 | Msa0460400:CDS |
| TGAACGGAGGAGGAGGAGGC+GGG | 0.484386 | 3_3:-57715658 | None:intergenic |
| TCCACCTTCTTAGTGAAGGT+TGG | 0.484390 | 3_3:-57722092 | None:intergenic |
| CAATGTAACCGACCTTGGCT+TGG | 0.485781 | 3_3:-57721377 | None:intergenic |
| ATACCTGGGTGCCAACCAAC+AGG | 0.486083 | 3_3:-57721010 | None:intergenic |
| CGGGTTTGGTGGTGATTGAA+CGG | 0.490273 | 3_3:-57715674 | None:intergenic |
| ACGAGAGGTTGTTCAGGTTG+GGG | 0.490622 | 3_3:-57715726 | None:intergenic |
| TTGGAGACTCCAGAGATGAT+TGG | 0.491323 | 3_3:+57721922 | Msa0460400:CDS |
| TTTGAAGTGAGTGCTCCTAC+AGG | 0.494027 | 3_3:-57718192 | None:intergenic |
| GATTGCCCAATTTGTGATCA+GGG | 0.494519 | 3_3:+57717356 | Msa0460400:CDS |
| TAAACCAAACCCCATTGTTA+GGG | 0.495727 | 3_3:-57715598 | None:intergenic |
| ATGATGGTTTGAAGAGGCAG+AGG | 0.496611 | 3_3:+57720697 | Msa0460400:CDS |
| ATATGGAGAGTGGGGTGAGA+GGG | 0.497461 | 3_3:-57715525 | None:intergenic |
| AGAATCTAACCAGGAAGAGC+GGG | 0.498480 | 3_3:-57716002 | None:intergenic |
| TTTCCTGTTGGTTGGCACCC+AGG | 0.498602 | 3_3:+57721007 | Msa0460400:CDS |
| TGATTGAACGGAGGAGGAGG+AGG | 0.499246 | 3_3:-57715662 | None:intergenic |
| TTTGCGGAGTTCGGGTTTGG+TGG | 0.501325 | 3_3:-57715685 | None:intergenic |
| TCAAATAATGTATGGGGCGA+AGG | 0.502062 | 3_3:+57720903 | Msa0460400:CDS |
| CAAACCATCATAACAAAAGC+GGG | 0.502070 | 3_3:-57720685 | None:intergenic |
| AGTGAAGATGGCAATGCAGC+TGG | 0.503709 | 3_3:-57722065 | None:intergenic |
| CATTGTGCCTCGTTTAAATG+AGG | 0.505239 | 3_3:+57718329 | Msa0460400:CDS |
| CGTGGTAGTGGAGAAGAGAT+TGG | 0.506494 | 3_3:+57718111 | Msa0460400:CDS |
| GAAAGCACGAGAAGGAGTGA+TGG | 0.508097 | 3_3:+57717307 | Msa0460400:CDS |
| ACGGAGGAGGAGGAGGCGGG+TGG | 0.509605 | 3_3:-57715655 | None:intergenic |
| GCAGATGCTTTCCTGTTGGT+TGG | 0.510700 | 3_3:+57720999 | Msa0460400:CDS |
| GGTGGTGGTGGTTTGACGAA+AGG | 0.512548 | 3_3:-57715634 | None:intergenic |
| AGGGCTTCACGCCAGTTCAC+AGG | 0.513098 | 3_3:-57720762 | None:intergenic |
| AGCCCTTTCTTTGGTAGCAG+AGG | 0.515340 | 3_3:+57720779 | Msa0460400:CDS |
| TCCAAATTTGCAGCCACGGG+TGG | 0.516967 | 3_3:+57721308 | Msa0460400:intron |
| ACCGCAATCCCGAATGGTGA+TGG | 0.517659 | 3_3:-57722116 | None:intergenic |
| GTAATAGATATCTGCCCTGT+AGG | 0.517990 | 3_3:+57718177 | Msa0460400:CDS |
| AAGATTTCTTAAACAGGCTG+GGG | 0.519660 | 3_3:+57720880 | Msa0460400:CDS |
| GCCACGGGTGGAAGCTGCTA+TGG | 0.519839 | 3_3:+57721320 | Msa0460400:intron |
| TCCGCAAGCAAGGTCTTGCT+TGG | 0.522854 | 3_3:-57722285 | None:intergenic |
| CACGGTGCATTCAATGTACA+AGG | 0.523747 | 3_3:+57717498 | Msa0460400:CDS |
| AAAACCTCGATAGCGTCATC+GGG | 0.526600 | 3_3:-57715801 | None:intergenic |
| AAGGTTGGTCTCAGTGAAGA+TGG | 0.527216 | 3_3:-57722077 | None:intergenic |
| GTGCAGCAGCCTGGGCAGCA+TGG | 0.527867 | 3_3:-57721647 | None:intergenic |
| TCCATCACCATTCGGGATTG+CGG | 0.530979 | 3_3:+57722115 | Msa0460400:CDS |
| GATTCGCATCAGAGGTTGCA+GGG | 0.532762 | 3_3:+57718064 | Msa0460400:CDS |
| TCAAACCATCATAACAAAAG+CGG | 0.533289 | 3_3:-57720686 | None:intergenic |
| ACTCCCCGTACACCCGTCGC+TGG | 0.533775 | 3_3:+57715756 | Msa0460400:CDS |
| TCTCTGGAGTCTCCAACTGT+TGG | 0.533784 | 3_3:-57721915 | None:intergenic |
| TGCGAGTGTATATGGAGAGT+GGG | 0.533852 | 3_3:-57715534 | None:intergenic |
| AAGAATCTAACCAGGAAGAG+CGG | 0.534209 | 3_3:-57716003 | None:intergenic |
| CAGATTGGGGCACAAGTCCA+AGG | 0.534798 | 3_3:-57721674 | None:intergenic |
| GGCATGTTAGGTCGTGGTAG+TGG | 0.535963 | 3_3:+57718099 | Msa0460400:CDS |
| AAGCAAGGTCTTGCTTGGCC+AGG | 0.537505 | 3_3:-57722280 | None:intergenic |
| ATATGACTGATGCAATTACC+AGG | 0.537594 | 3_3:+57722150 | Msa0460400:CDS |
| AACCTCTGCTACCAAAGAAA+GGG | 0.540408 | 3_3:-57720781 | None:intergenic |
| TTGTCGTATGTGTCTTGTTG+AGG | 0.541076 | 3_3:+57715941 | Msa0460400:CDS |
| GATAACGAACATCTTGGTAC+TGG | 0.541143 | 3_3:+57721423 | Msa0460400:CDS |
| AGGCCCAATGTAACCGACCT+TGG | 0.541841 | 3_3:-57721382 | None:intergenic |
| TGGCCTGCAGTTCCAACAGT+TGG | 0.541849 | 3_3:+57721903 | Msa0460400:CDS |
| TTGGCGCTACAGTCCTCAGT+CGG | 0.542821 | 3_3:-57722016 | None:intergenic |
| CCAGCAAAATACAAATGGAA+TGG | 0.543143 | 3_3:-57722339 | None:intergenic |
| AGCAGCTGCATTCAGTGAGA+AGG | 0.545961 | 3_3:+57721839 | Msa0460400:CDS |
| CCTATGATTCGTGGTCCTGA+TGG | 0.547239 | 3_3:+57720729 | Msa0460400:CDS |
| TGTACTCTAGCGCCAGCGAC+GGG | 0.547564 | 3_3:-57715768 | None:intergenic |
| ATTACTTCTCCATGCTGCCC+AGG | 0.551990 | 3_3:+57721638 | Msa0460400:CDS |
| AGATCTGTGTTGTTGATTTG+GGG | 0.552360 | 3_3:-57715567 | None:intergenic |
| TGGCGCTACAGTCCTCAGTC+GGG | 0.554048 | 3_3:-57722015 | None:intergenic |
| GCTGGGGTCAAATAATGTAT+GGG | 0.555168 | 3_3:+57720896 | Msa0460400:CDS |
| AACACTTCTTGAAATTGCTG+AGG | 0.556487 | 3_3:+57721452 | Msa0460400:CDS |
| CTAACCAGGAAGAGCGGGCA+TGG | 0.557243 | 3_3:-57715997 | None:intergenic |
| TCATAGTTGAAATCAGTAGC+AGG | 0.557491 | 3_3:-57721402 | None:intergenic |
| CGATAGCGTCATCGGGATTG+GGG | 0.558144 | 3_3:-57715794 | None:intergenic |
| AGATTCGCATCAGAGGTTGC+AGG | 0.558678 | 3_3:+57718063 | Msa0460400:CDS |
| GGGAGCTGATGATACAAACT+TGG | 0.560243 | 3_3:+57721734 | Msa0460400:CDS |
| ATGCGAGTGTATATGGAGAG+TGG | 0.561036 | 3_3:-57715535 | None:intergenic |
| GGGGAGTTCGCGCCCGACTG+AGG | 0.561987 | 3_3:+57722003 | Msa0460400:CDS |
| GTTGAAACCATCGCAAAACA+AGG | 0.564233 | 3_3:+57721579 | Msa0460400:CDS |
| GAGCTCTGTCCGAGATAGCA+GGG | 0.566857 | 3_3:+57721955 | Msa0460400:CDS |
| ATTGATGTTACTGATGCTGT+TGG | 0.567155 | 3_3:+57718264 | Msa0460400:CDS |
| TGATCTTCAGGATCAGTCAA+TGG | 0.567607 | 3_3:+57717388 | Msa0460400:CDS |
| ATGTACTCTAGCGCCAGCGA+CGG | 0.568207 | 3_3:-57715769 | None:intergenic |
| GGACTAACCCGAATTGTACA+TGG | 0.571193 | 3_3:-57722391 | None:intergenic |
| CATCAGGACCACGAATCATA+GGG | 0.571545 | 3_3:-57720728 | None:intergenic |
| AAGGATGCACACAGCAAACA+TGG | 0.573067 | 3_3:+57721883 | Msa0460400:CDS |
| CTCATGACAAGTGAACTCTC+TGG | 0.573975 | 3_3:+57718150 | Msa0460400:CDS |
| TATATGGAGAGTGGGGTGAG+AGG | 0.574887 | 3_3:-57715526 | None:intergenic |
| TTAAATGACCCTATGATTCG+TGG | 0.576146 | 3_3:+57720720 | Msa0460400:CDS |
| TCTAACATCCACCCTAACAA+TGG | 0.577250 | 3_3:+57715587 | Msa0460400:CDS |
| CATACGACAATTTCCAGCAA+TGG | 0.579258 | 3_3:-57715928 | None:intergenic |
| GGAATGTCATCAGATCTGAT+TGG | 0.582105 | 3_3:+57721601 | Msa0460400:CDS |
| GATCTTGGCATGTTAGGTCG+TGG | 0.583375 | 3_3:+57718093 | Msa0460400:CDS |
| AACAGCATCAGTAACATCAA+TGG | 0.585328 | 3_3:-57718262 | None:intergenic |
| ACACTTCTTGAAATTGCTGA+GGG | 0.586259 | 3_3:+57721453 | Msa0460400:CDS |
| TTCTCAACCGCAATCCCGAA+TGG | 0.588558 | 3_3:-57722122 | None:intergenic |
| ACCAAACCCCATTGTTAGGG+TGG | 0.591247 | 3_3:-57715595 | None:intergenic |
| TGCAGGACATAAACGAAGAG+TGG | 0.593125 | 3_3:+57720649 | Msa0460400:intron |
| GAGACCAACCTTCACTAAGA+AGG | 0.595141 | 3_3:+57722088 | Msa0460400:CDS |
| TTTACCCTATGATACAATTG+GGG | 0.596584 | 3_3:+57721983 | Msa0460400:CDS |
| TGGATCCACCTTCTTAGTGA+AGG | 0.596835 | 3_3:-57722096 | None:intergenic |
| TTGAAGTGAGTGCTCCTACA+GGG | 0.600626 | 3_3:-57718191 | None:intergenic |
| ATGGCATTTGGCTCTGATCG+TGG | 0.602789 | 3_3:+57717407 | Msa0460400:CDS |
| TTGTTCAGGTTGGGGCTGAG+CGG | 0.604200 | 3_3:-57715718 | None:intergenic |
| GATCTGTGTTGTTGATTTGG+GGG | 0.604683 | 3_3:-57715566 | None:intergenic |
| GTCATCAGATCTGATTGGAA+TGG | 0.604807 | 3_3:+57721606 | Msa0460400:CDS |
| ACCATAGCAGCTTCCACCCG+TGG | 0.605776 | 3_3:-57721321 | None:intergenic |
| GTGTGTTAGATTCGCATCAG+AGG | 0.608633 | 3_3:+57718056 | Msa0460400:CDS |
| GAAAGCAGATGCTTTCCTGT+TGG | 0.608999 | 3_3:+57720995 | Msa0460400:CDS |
| TACCCCGTTAAAATTCCGAA+AGG | 0.610431 | 3_3:+57715834 | Msa0460400:CDS |
| GTCATCACAGTCTTTACCAA+AGG | 0.611871 | 3_3:-57717476 | None:intergenic |
| GCCAGTTCACAGGCTTAAAG+CGG | 0.612009 | 3_3:-57720752 | None:intergenic |
| TATCGTACTATCCGCAAGCA+AGG | 0.612375 | 3_3:-57722295 | None:intergenic |
| ACCAACCTTCACTAAGAAGG+TGG | 0.614871 | 3_3:+57722091 | Msa0460400:CDS |
| GCGCCAGCGACGGGTGTACG+GGG | 0.624880 | 3_3:-57715759 | None:intergenic |
| GGTACATATGAAAATACTGA+AGG | 0.625208 | 3_3:+57721864 | Msa0460400:CDS |
| GTTGTTTATCAAGGTCACCA+TGG | 0.628883 | 3_3:+57721780 | Msa0460400:CDS |
| AATATTCGTATTGATAGCAG+AGG | 0.629612 | 3_3:+57718291 | Msa0460400:CDS |
| TTTGTTATGATGGTTTGAAG+AGG | 0.631528 | 3_3:+57720691 | Msa0460400:CDS |
| GCCAAGCAAGACCTTGCTTG+CGG | 0.634950 | 3_3:+57722284 | Msa0460400:three_prime_UTR |
| CAATCCCGATGACGCTATCG+AGG | 0.640482 | 3_3:+57715797 | Msa0460400:CDS |
| ATAGCCAAGAAAGCACGAGA+AGG | 0.643724 | 3_3:+57717299 | Msa0460400:CDS |
| CAGCACCAACAATGATAACA+GGG | 0.645958 | 3_3:-57721515 | None:intergenic |
| GCTGCATTCAGTGAGAAGGA+AGG | 0.652544 | 3_3:+57721843 | Msa0460400:CDS |
| CTGGGGTCAAATAATGTATG+GGG | 0.653742 | 3_3:+57720897 | Msa0460400:CDS |
| TAGAATACGCAAGACTGTCA+CGG | 0.655290 | 3_3:+57721350 | Msa0460400:CDS |
| GCGAGTGTATATGGAGAGTG+GGG | 0.661951 | 3_3:-57715533 | None:intergenic |
| ATTCGCATCAGAGGTTGCAG+GGG | 0.664579 | 3_3:+57718065 | Msa0460400:CDS |
| TGATATGAAGAGATCTGTGG+TGG | 0.665318 | 3_3:+57717439 | Msa0460400:CDS |
| TTGAAACCATCGCAAAACAA+GGG | 0.668125 | 3_3:+57721580 | Msa0460400:CDS |
| TATGACTGATGCAATTACCA+GGG | 0.680312 | 3_3:+57722151 | Msa0460400:CDS |
| AGCTCTGTCCGAGATAGCAG+GGG | 0.680552 | 3_3:+57721956 | Msa0460400:CDS |
| GATAAACACTCTTATCACCA+TGG | 0.680783 | 3_3:-57721797 | None:intergenic |
| ACGGCAAACCAAGCCAAGGT+CGG | 0.681995 | 3_3:+57721369 | Msa0460400:CDS |
| TGTCACGGCAAACCAAGCCA+AGG | 0.683373 | 3_3:+57721365 | Msa0460400:CDS |
| TTACCCTATGATACAATTGG+GGG | 0.685077 | 3_3:+57721984 | Msa0460400:CDS |
| TGCCCAATTTGTGATCAGGG+TGG | 0.691459 | 3_3:+57717359 | Msa0460400:CDS |
| GTTTGGTGGTGATTGAACGG+AGG | 0.700949 | 3_3:-57715671 | None:intergenic |
| CACTGATATGAAGAGATCTG+TGG | 0.705213 | 3_3:+57717436 | Msa0460400:CDS |
| CGGGGAGTGAGATCGACGAG+AGG | 0.710019 | 3_3:-57715741 | None:intergenic |
| AAACTTGGACAAGATCCCGA+AGG | 0.712042 | 3_3:+57721749 | Msa0460400:CDS |
| TAACATCCACCCTAACAATG+GGG | 0.738744 | 3_3:+57715589 | Msa0460400:CDS |
| TGGTAAAGACTGTGATGACA+CGG | 0.740395 | 3_3:+57717480 | Msa0460400:CDS |
| AATCTAACCTCATTTAAACG+AGG | 0.763738 | 3_3:-57718336 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTAAAAAATCATTTTTTA+TGG | + | chr3_3:57716396-57716415 | Msa0460400:intron | 10.0% |
| !!! | GTTAAAAAATCATTTTTTAT+GGG | + | chr3_3:57716397-57716416 | Msa0460400:intron | 10.0% |
| !!! | ATTACATTTTTAACAATAAA+TGG | - | chr3_3:57717232-57717251 | None:intergenic | 10.0% |
| !! | ATATGATTAAAATAATATTC+TGG | + | chr3_3:57717791-57717810 | Msa0460400:intron | 10.0% |
| !!! | GATTTTCAAATTTTATTAAT+TGG | + | chr3_3:57718673-57718692 | Msa0460400:intron | 10.0% |
| !!! | ATAACATTTTTAAAAAGTTT+GGG | - | chr3_3:57719290-57719309 | None:intergenic | 10.0% |
| !!! | AATAACATTTTTAAAAAGTT+TGG | - | chr3_3:57719291-57719310 | None:intergenic | 10.0% |
| !!! | AATAAAATTATTCGATATTT+TGG | - | chr3_3:57720016-57720035 | None:intergenic | 10.0% |
| !!! | ATATTTTTGGTATATAATAA+TGG | + | chr3_3:57720207-57720226 | Msa0460400:intron | 10.0% |
| !!! | TATGAAAATTATTGTTTTAT+TGG | + | chr3_3:57721199-57721218 | Msa0460400:intron | 10.0% |
| !!! | TGTTTGAAAAAATAGATTTT+GGG | - | chr3_3:57716355-57716374 | None:intergenic | 15.0% |
| !!! | ACTATTAAGTTTAATACTTT+TGG | - | chr3_3:57716800-57716819 | None:intergenic | 15.0% |
| !! | AAAATTATCATATGTTTAGT+TGG | + | chr3_3:57717092-57717111 | Msa0460400:intron | 15.0% |
| !!! | ATCTTACATTTAATTTCATT+TGG | + | chr3_3:57717146-57717165 | Msa0460400:intron | 15.0% |
| !! | TATAATCATATGTTCAATTT+AGG | + | chr3_3:57717251-57717270 | Msa0460400:intron | 15.0% |
| !! | ATAATCATATGTTCAATTTA+GGG | + | chr3_3:57717252-57717271 | Msa0460400:intron | 15.0% |
| !! | ATATATATTAAATTAAGTGG+TGG | + | chr3_3:57717714-57717733 | Msa0460400:intron | 15.0% |
| !! | CTATTATCACAATTTATTAT+GGG | + | chr3_3:57718839-57718858 | Msa0460400:intron | 15.0% |
| !!! | TTTTTTAAGTGTTATTTACT+GGG | + | chr3_3:57719105-57719124 | Msa0460400:intron | 15.0% |
| !!! | TAACATTTTTAAAAAGTTTG+GGG | - | chr3_3:57719289-57719308 | None:intergenic | 15.0% |
| !!! | ATAATAATGGTATAATTTTG+TGG | + | chr3_3:57720220-57720239 | Msa0460400:intron | 15.0% |
| !! | ATATATTAATGCATAAAAGA+TGG | - | chr3_3:57721257-57721276 | None:intergenic | 15.0% |
| !!! | CGTGTATTATTTATTTTTTT+TGG | + | chr3_3:57722223-57722242 | Msa0460400:three_prime_UTR | 15.0% |
| !!! | ATGAATTTTGTTGAAGATAT+TGG | - | chr3_3:57715490-57715509 | None:intergenic | 20.0% |
| !!! | GTGTTTGAAAAAATAGATTT+TGG | - | chr3_3:57716356-57716375 | None:intergenic | 20.0% |
| !!! | AAAAAATCATTTTTTATGGG+CGG | + | chr3_3:57716400-57716419 | Msa0460400:intron | 20.0% |
| !!! | AAATTGTAGTTTGTAGATAA+CGG | + | chr3_3:57716854-57716873 | Msa0460400:intron | 20.0% |
| !! | TGATATTCTTGTAAGAATTA+AGG | + | chr3_3:57717664-57717683 | Msa0460400:intron | 20.0% |
| !! | ATTTAATTGACAACAAAAAG+AGG | - | chr3_3:57717965-57717984 | None:intergenic | 20.0% |
| !!! | ATGTTTTATTAAACTACTTG+CGG | + | chr3_3:57718368-57718387 | Msa0460400:intron | 20.0% |
| !! | ACAACCAATTAAATAAATCA+AGG | - | chr3_3:57718596-57718615 | None:intergenic | 20.0% |
| !! | TGATTTATTTAATTGGTTGT+AGG | + | chr3_3:57718596-57718615 | Msa0460400:intron | 20.0% |
| !! | TAATAAATTGTGATAATAGG+AGG | - | chr3_3:57718838-57718857 | None:intergenic | 20.0% |
| !! | CCATAATAAATTGTGATAAT+AGG | - | chr3_3:57718841-57718860 | None:intergenic | 20.0% |
| !! | CCTATTATCACAATTTATTA+TGG | + | chr3_3:57718838-57718857 | Msa0460400:intron | 20.0% |
| !!! | GTTTTTTAAGTGTTATTTAC+TGG | + | chr3_3:57719104-57719123 | Msa0460400:intron | 20.0% |
| !!! | AACATTTTTAAAAAGTTTGG+GGG | - | chr3_3:57719288-57719307 | None:intergenic | 20.0% |
| !!! | GAGATGATGTTTTATATTTA+GGG | + | chr3_3:57719596-57719615 | Msa0460400:intron | 20.0% |
| !! | TAATGTCTAACAAATGTTTA+CGG | + | chr3_3:57719740-57719759 | Msa0460400:intron | 20.0% |
| !! | TTAGAGTTAGAAATTCATAT+GGG | + | chr3_3:57719766-57719785 | Msa0460400:intron | 20.0% |
| !!! | AAAATTATTCGATATTTTGG+CGG | - | chr3_3:57720013-57720032 | None:intergenic | 20.0% |
| !!! | ATTATAATTTGTAGATTCTG+AGG | + | chr3_3:57720176-57720195 | Msa0460400:intron | 20.0% |
| !! | AATAAATTAGAGATATACCT+GGG | - | chr3_3:57721027-57721046 | None:intergenic | 20.0% |
| !! | AAATAAATTAGAGATATACC+TGG | - | chr3_3:57721028-57721047 | None:intergenic | 20.0% |
| !!! | CTTTTATGCATTAATATATC+TGG | + | chr3_3:57721258-57721277 | Msa0460400:intron | 20.0% |
| !! | TGCAAAGTTTGTATATTTAA+TGG | + | chr3_3:57721713-57721732 | Msa0460400:CDS | 20.0% |
| !! | GCAAAGTTTGTATATTTAAT+GGG | + | chr3_3:57721714-57721733 | Msa0460400:CDS | 20.0% |
| !!! | TTCTTTTTTTTTTCTGTTGC+TGG | + | chr3_3:57716030-57716049 | Msa0460400:intron | 25.0% |
| !!! | CTACTACACTTATTTTAATC+CGG | - | chr3_3:57716167-57716186 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTTGTAAGTGTT+AGG | + | chr3_3:57716271-57716290 | Msa0460400:intron | 25.0% |
| !!! | GAAAAAATAGATTTTGGGAA+AGG | - | chr3_3:57716350-57716369 | None:intergenic | 25.0% |
| !!! | CTATTTTTTCAAACACAAAG+AGG | + | chr3_3:57716360-57716379 | Msa0460400:intron | 25.0% |
| ! | ACAATATTAGATAGAGAGTT+GGG | + | chr3_3:57716468-57716487 | Msa0460400:intron | 25.0% |
| ! | TATGAGAGAAACTATTAAGA+AGG | + | chr3_3:57716638-57716657 | Msa0460400:intron | 25.0% |
| ! | TATATGATAGAACATTATGC+CGG | + | chr3_3:57716694-57716713 | Msa0460400:intron | 25.0% |
| !!! | TGATTCTTTTGATTAGTTCA+AGG | + | chr3_3:57716774-57716793 | Msa0460400:intron | 25.0% |
| ! | AAAAAGAAATGTCAACTAGA+TGG | - | chr3_3:57716937-57716956 | None:intergenic | 25.0% |
| ! | TATCATATGTTTAGTTGGTT+TGG | + | chr3_3:57717097-57717116 | Msa0460400:intron | 25.0% |
| !! | ATCATATGTTTAGTTGGTTT+GGG | + | chr3_3:57717098-57717117 | Msa0460400:intron | 25.0% |
| ! | TAAAGATAATCAAGTTTGCA+GGG | - | chr3_3:57717533-57717552 | None:intergenic | 25.0% |
| !! | TTGATAACTATATCATACCT+TGG | + | chr3_3:57717563-57717582 | Msa0460400:intron | 25.0% |
| ! | TAAATTAAAAGAAACCTAGC+TGG | - | chr3_3:57717870-57717889 | None:intergenic | 25.0% |
| !!! | GCTAGGTTTCTTTTAATTTA+TGG | + | chr3_3:57717870-57717889 | Msa0460400:intron | 25.0% |
| !! | ATTTTATCTGAGTTCCTTAA+TGG | + | chr3_3:57718003-57718022 | Msa0460400:intron | 25.0% |
| ! | AATTCATACTACGAAATCAT+AGG | - | chr3_3:57718483-57718502 | None:intergenic | 25.0% |
| ! | CTGACCTTGATTTATTTAAT+TGG | + | chr3_3:57718589-57718608 | Msa0460400:intron | 25.0% |
| ! | AAGTAATCAGGTTAATATCA+GGG | - | chr3_3:57718760-57718779 | None:intergenic | 25.0% |
| ! | AAAGTAATCAGGTTAATATC+AGG | - | chr3_3:57718761-57718780 | None:intergenic | 25.0% |
| ! | TATAAAACATCATCTCCAAA+AGG | - | chr3_3:57719592-57719611 | None:intergenic | 25.0% |
| !! | GGAGATGATGTTTTATATTT+AGG | + | chr3_3:57719595-57719614 | Msa0460400:intron | 25.0% |
| ! | CCTATTATAAACCAAACAAT+GGG | + | chr3_3:57719666-57719685 | Msa0460400:intron | 25.0% |
| ! | TTTGTTAGACATTAGGAATT+AGG | - | chr3_3:57719734-57719753 | None:intergenic | 25.0% |
| !! | GTAAACATTTGTTAGACATT+AGG | - | chr3_3:57719741-57719760 | None:intergenic | 25.0% |
| ! | GTTAGAGTTAGAAATTCATA+TGG | + | chr3_3:57719765-57719784 | Msa0460400:intron | 25.0% |
| ! | AGAGAAGTTATTAAGTATGA+TGG | + | chr3_3:57719838-57719857 | Msa0460400:intron | 25.0% |
| !!! | CTATCTAGTTTTAACAACAT+GGG | + | chr3_3:57719974-57719993 | Msa0460400:intron | 25.0% |
| !!! | TGAGGTATCTCTAATATTTT+TGG | + | chr3_3:57720194-57720213 | Msa0460400:intron | 25.0% |
| ! | TATATGCTTAATTTAGCAGA+AGG | + | chr3_3:57720577-57720596 | Msa0460400:intron | 25.0% |
| ! | ATATGCTTAATTTAGCAGAA+GGG | + | chr3_3:57720578-57720597 | Msa0460400:intron | 25.0% |
| ! | CACTAAAAGATTTCTTAAAC+AGG | + | chr3_3:57720874-57720893 | Msa0460400:CDS | 25.0% |
| !!! | ACTTCTCTAGTTTTATGTTA+TGG | + | chr3_3:57721057-57721076 | Msa0460400:intron | 25.0% |
| ! | CAATATATAACAGGAATCAT+TGG | - | chr3_3:57721087-57721106 | None:intergenic | 25.0% |
| ! | ATCGCATTTCAATATATAAC+AGG | - | chr3_3:57721096-57721115 | None:intergenic | 25.0% |
| !! | GGATTTCATAATTGTAGTTT+TGG | + | chr3_3:57721143-57721162 | Msa0460400:intron | 25.0% |
| !! | TTGAAATAGTCTTGGAAAAT+GGG | - | chr3_3:57721485-57721504 | None:intergenic | 25.0% |
| !! | TTTGAAATAGTCTTGGAAAA+TGG | - | chr3_3:57721486-57721505 | None:intergenic | 25.0% |
| !! | GTACGATATGATTTGAAATT+AGG | + | chr3_3:57722310-57722329 | Msa0460400:three_prime_UTR | 25.0% |
| !! | AATTTTTGCCATGTACAATT+CGG | + | chr3_3:57722383-57722402 | Msa0460400:three_prime_UTR | 25.0% |
| !! | GTAAACTTTTAACAAACAGT+CGG | - | chr3_3:57722415-57722434 | None:intergenic | 25.0% |
| !! | TAGATCTGTGTTGTTGATTT+GGG | - | chr3_3:57715571-57715590 | None:intergenic | 30.0% |
| ! | TTAGATCTGTGTTGTTGATT+TGG | - | chr3_3:57715572-57715591 | None:intergenic | 30.0% |
| !! | AATCCTTTCGGAATTTTAAC+GGG | - | chr3_3:57715840-57715859 | None:intergenic | 30.0% |
| ! | GAATCCTTTCGGAATTTTAA+CGG | - | chr3_3:57715841-57715860 | None:intergenic | 30.0% |
| CTGCTATGATAACAAAATCT+AGG | - | chr3_3:57715903-57715922 | None:intergenic | 30.0% | |
| !!! | TGAGTTTTGTTGTGTGTAAA+TGG | + | chr3_3:57716117-57716136 | Msa0460400:intron | 30.0% |
| TAGAGATGAAGATATTGCAT+TGG | + | chr3_3:57716184-57716203 | Msa0460400:intron | 30.0% | |
| TAATGCTAGACCATGATTTA+GGG | + | chr3_3:57716215-57716234 | Msa0460400:intron | 30.0% | |
| TCATTTGTAAGTGTTAGGTT+AGG | + | chr3_3:57716276-57716295 | Msa0460400:intron | 30.0% | |
| GACAATATTAGATAGAGAGT+TGG | + | chr3_3:57716467-57716486 | Msa0460400:intron | 30.0% | |
| CAATATTAGATAGAGAGTTG+GGG | + | chr3_3:57716469-57716488 | Msa0460400:intron | 30.0% | |
| ! | AATAAGGAGAGTATATCAGA+TGG | + | chr3_3:57716572-57716591 | Msa0460400:intron | 30.0% |
| ! | GTTTCTCTCATAGTTTTTCT+AGG | - | chr3_3:57716630-57716649 | None:intergenic | 30.0% |
| ! | AGAGATTAATGAGTTGGATA+AGG | + | chr3_3:57716665-57716684 | Msa0460400:intron | 30.0% |
| CTATTAGACACATAACTAGA+TGG | - | chr3_3:57716896-57716915 | None:intergenic | 30.0% | |
| !! | TCATATGTTTAGTTGGTTTG+GGG | + | chr3_3:57717099-57717118 | Msa0460400:intron | 30.0% |
| !! | ACCTTGATTTTGTTTAGTTG+AGG | + | chr3_3:57717199-57717218 | Msa0460400:intron | 30.0% |
| ACCTCAACTAAACAAAATCA+AGG | - | chr3_3:57717203-57717222 | None:intergenic | 30.0% | |
| GTAAAGATAATCAAGTTTGC+AGG | - | chr3_3:57717534-57717553 | None:intergenic | 30.0% | |
| TATATATATGCAACTCAACG+AGG | - | chr3_3:57717691-57717710 | None:intergenic | 30.0% | |
| TTACAGTATGATAGTTTCTG+AGG | + | chr3_3:57717743-57717762 | Msa0460400:intron | 30.0% | |
| TACAGTATGATAGTTTCTGA+GGG | + | chr3_3:57717744-57717763 | Msa0460400:intron | 30.0% | |
| TCTGGTGTGATAATTTAGTT+TGG | + | chr3_3:57717809-57717828 | Msa0460400:intron | 30.0% | |
| AATTTATGGTTAACGACATC+TGG | + | chr3_3:57717884-57717903 | Msa0460400:intron | 30.0% | |
| AATTGACAACAAAAAGAGGA+TGG | - | chr3_3:57717961-57717980 | None:intergenic | 30.0% | |
| GGAAGAAAGTAATATTTCAC+CGG | - | chr3_3:57718031-57718050 | None:intergenic | 30.0% | |
| AAATATTACTTTCTTCCCAC+AGG | + | chr3_3:57718034-57718053 | Msa0460400:intron | 30.0% | |
| TCTGCTATCAATACGAATAT+TGG | - | chr3_3:57718292-57718311 | None:intergenic | 30.0% | |
| ! | AATATTCGTATTGATAGCAG+AGG | + | chr3_3:57718291-57718310 | Msa0460400:CDS | 30.0% |
| AATCTAACCTCATTTAAACG+AGG | - | chr3_3:57718339-57718358 | None:intergenic | 30.0% | |
| TAAATGAGGTTAGATTCTGA+TGG | + | chr3_3:57718343-57718362 | Msa0460400:intron | 30.0% | |
| ACAACACTCATAAGTACTTA+AGG | - | chr3_3:57718460-57718479 | None:intergenic | 30.0% | |
| CAATCTACACTACAACTTAT+AGG | + | chr3_3:57718531-57718550 | Msa0460400:intron | 30.0% | |
| AGTAATCAGGTTAATATCAG+GGG | - | chr3_3:57718759-57718778 | None:intergenic | 30.0% | |
| GCTAGTGATATAAAGTAATC+AGG | - | chr3_3:57718772-57718791 | None:intergenic | 30.0% | |
| ACAATTTATTATGGGACTGA+AGG | + | chr3_3:57718847-57718866 | Msa0460400:intron | 30.0% | |
| TGAATAACTACTCAGACAAT+TGG | - | chr3_3:57718871-57718890 | None:intergenic | 30.0% | |
| AAAATGCTCACATATTCTTC+TGG | - | chr3_3:57718972-57718991 | None:intergenic | 30.0% | |
| CATGATTCATGATCAATCAA+TGG | - | chr3_3:57719131-57719150 | None:intergenic | 30.0% | |
| GGATACACATTCAACTAAAT+GGG | + | chr3_3:57719254-57719273 | Msa0460400:intron | 30.0% | |
| GATACACATTCAACTAAATG+GGG | + | chr3_3:57719255-57719274 | Msa0460400:intron | 30.0% | |
| ATACACATTCAACTAAATGG+GGG | + | chr3_3:57719256-57719275 | Msa0460400:intron | 30.0% | |
| ! | AGAATGTACATCTTAGCTTT+AGG | + | chr3_3:57719624-57719643 | Msa0460400:intron | 30.0% |
| !! | GAATGTACATCTTAGCTTTA+GGG | + | chr3_3:57719625-57719644 | Msa0460400:intron | 30.0% |
| GCCTATTATAAACCAAACAA+TGG | + | chr3_3:57719665-57719684 | Msa0460400:intron | 30.0% | |
| ! | CCCATTGTTTGGTTTATAAT+AGG | - | chr3_3:57719669-57719688 | None:intergenic | 30.0% |
| TCTTCCTAATGTCTAACAAA+TGG | + | chr3_3:57719696-57719715 | Msa0460400:intron | 30.0% | |
| CTTCCTAATGTCTAACAAAT+GGG | + | chr3_3:57719697-57719716 | Msa0460400:intron | 30.0% | |
| TTAGGAATTAGGAACATACT+TGG | - | chr3_3:57719723-57719742 | None:intergenic | 30.0% | |
| GACTATAAATCAGTGTACAA+AGG | - | chr3_3:57719909-57719928 | None:intergenic | 30.0% | |
| ! | TATCTCGCTATAGCATTTTA+AGG | + | chr3_3:57719943-57719962 | Msa0460400:intron | 30.0% |
| ! | ATCTCGCTATAGCATTTTAA+GGG | + | chr3_3:57719944-57719963 | Msa0460400:intron | 30.0% |
| !!! | GCTATCTAGTTTTAACAACA+TGG | + | chr3_3:57719973-57719992 | Msa0460400:intron | 30.0% |
| GAGATTATTGAATGCTTGTT+TGG | + | chr3_3:57720069-57720088 | Msa0460400:intron | 30.0% | |
| ! | TTGTCGTTGATAGAAATTTC+TGG | + | chr3_3:57720334-57720353 | Msa0460400:intron | 30.0% |
| CGTAAAATATTAATCCTCAC+TGG | - | chr3_3:57720523-57720542 | None:intergenic | 30.0% | |
| TCAAACCATCATAACAAAAG+CGG | - | chr3_3:57720689-57720708 | None:intergenic | 30.0% | |
| ! | TTTGTTATGATGGTTTGAAG+AGG | + | chr3_3:57720691-57720710 | Msa0460400:CDS | 30.0% |
| GTTAAACCAGAAGAAATTGT+TGG | + | chr3_3:57720813-57720832 | Msa0460400:CDS | 30.0% | |
| GATATTCCAACAATTTCTTC+TGG | - | chr3_3:57720822-57720841 | None:intergenic | 30.0% | |
| GAAGAAATTGTTGGAATATC+TGG | + | chr3_3:57720822-57720841 | Msa0460400:CDS | 30.0% | |
| ! | GAAATCTTTTAGTGCAATCA+TGG | - | chr3_3:57720868-57720887 | None:intergenic | 30.0% |
| AAAAGATTTCTTAAACAGGC+TGG | + | chr3_3:57720878-57720897 | Msa0460400:CDS | 30.0% | |
| AAAGATTTCTTAAACAGGCT+GGG | + | chr3_3:57720879-57720898 | Msa0460400:CDS | 30.0% | |
| ATTATGAATACTAGCATTGC+TGG | + | chr3_3:57720966-57720985 | Msa0460400:CDS | 30.0% | |
| TAATATATCTGGTGTCTGTT+TGG | + | chr3_3:57721269-57721288 | Msa0460400:intron | 30.0% | |
| ! | AACTATGATAACGAACATCT+TGG | + | chr3_3:57721417-57721436 | Msa0460400:CDS | 30.0% |
| ! | TTTGGCATTTGAAATAGTCT+TGG | - | chr3_3:57721493-57721512 | None:intergenic | 30.0% |
| ! | AACAATGATAACAGGGTTTT+TGG | - | chr3_3:57721511-57721530 | None:intergenic | 30.0% |
| AAAAACCCTGTTATCATTGT+TGG | + | chr3_3:57721510-57721529 | Msa0460400:CDS | 30.0% | |
| CATGGAGAAGTAATACATTA+AGG | - | chr3_3:57721632-57721651 | None:intergenic | 30.0% | |
| !!! | TTCAAGGCTTTTTTCAGATT+GGG | - | chr3_3:57721691-57721710 | None:intergenic | 30.0% |
| !!! | ATTCAAGGCTTTTTTCAGAT+TGG | - | chr3_3:57721692-57721711 | None:intergenic | 30.0% |
| ATACAAACTTTGCAGATTCA+AGG | - | chr3_3:57721707-57721726 | None:intergenic | 30.0% | |
| !! | TAAACAACAAAAGCATCCTT+CGG | - | chr3_3:57721768-57721787 | None:intergenic | 30.0% |
| !!! | GATGCTTTTGTTGTTTATCA+AGG | + | chr3_3:57721771-57721790 | Msa0460400:CDS | 30.0% |
| GGTACATATGAAAATACTGA+AGG | + | chr3_3:57721864-57721883 | Msa0460400:CDS | 30.0% | |
| AATTATCTTCCAATCATCTC+TGG | - | chr3_3:57721934-57721953 | None:intergenic | 30.0% | |
| GTTTACCCTATGATACAATT+GGG | + | chr3_3:57721982-57722001 | Msa0460400:CDS | 30.0% | |
| TTTACCCTATGATACAATTG+GGG | + | chr3_3:57721983-57722002 | Msa0460400:CDS | 30.0% | |
| TTACACCAGCAAAATACAAA+TGG | - | chr3_3:57722347-57722366 | None:intergenic | 30.0% | |
| ! | ATTTTTGCCATGTACAATTC+GGG | + | chr3_3:57722384-57722403 | Msa0460400:three_prime_UTR | 30.0% |
| !! | AGATCTGTGTTGTTGATTTG+GGG | - | chr3_3:57715570-57715589 | None:intergenic | 35.0% |
| TAAACCAAACCCCATTGTTA+GGG | - | chr3_3:57715601-57715620 | None:intergenic | 35.0% | |
| ATAAACCAAACCCCATTGTT+AGG | - | chr3_3:57715602-57715621 | None:intergenic | 35.0% | |
| !! | ATCCTTTCGGAATTTTAACG+GGG | - | chr3_3:57715839-57715858 | None:intergenic | 35.0% |
| TGAAGAACAGAGAATCCTTT+CGG | - | chr3_3:57715852-57715871 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAATCTAACC+AGG | - | chr3_3:57716014-57716033 | None:intergenic | 35.0% | |
| AAGATATTGCATTGGATGTG+TGG | + | chr3_3:57716192-57716211 | Msa0460400:intron | 35.0% | |
| GTAATGCTAGACCATGATTT+AGG | + | chr3_3:57716214-57716233 | Msa0460400:intron | 35.0% | |
| ! | TCTACCATCTTTTCTCCAAT+AGG | - | chr3_3:57716501-57716520 | None:intergenic | 35.0% |
| GAGAAAAGATGGTAGAAACT+CGG | + | chr3_3:57716505-57716524 | Msa0460400:intron | 35.0% | |
| GACTTGTAGATTCTGCAATA+AGG | + | chr3_3:57716556-57716575 | Msa0460400:intron | 35.0% | |
| GGATCTAGAGATTAATGAGT+TGG | + | chr3_3:57716659-57716678 | Msa0460400:intron | 35.0% | |
| ATGTCAACTAGATGGTTACA+AGG | - | chr3_3:57716929-57716948 | None:intergenic | 35.0% | |
| TCACAAATTGGGCAATCTAA+TGG | - | chr3_3:57717353-57717372 | None:intergenic | 35.0% | |
| !! | TCTGTGGTGGATAAAAATCT+TGG | + | chr3_3:57717452-57717471 | Msa0460400:CDS | 35.0% |
| GGATAAAAATCTTGGACCTT+TGG | + | chr3_3:57717460-57717479 | Msa0460400:CDS | 35.0% | |
| !! | CAACAAATTTCTAGCTTCCA+AGG | - | chr3_3:57717583-57717602 | None:intergenic | 35.0% |
| ! | ATAGTTTCTGAGGGAACTTA+CGG | + | chr3_3:57717753-57717772 | Msa0460400:intron | 35.0% |
| AAAACCCAACCTTCAACATT+TGG | + | chr3_3:57717932-57717951 | Msa0460400:intron | 35.0% | |
| AAACCCAACCTTCAACATTT+GGG | + | chr3_3:57717933-57717952 | Msa0460400:intron | 35.0% | |
| ATATTTCACCGGATCCATTA+AGG | - | chr3_3:57718020-57718039 | None:intergenic | 35.0% | |
| !! | AACCTTTTGCATTTAAAGCC+CGG | + | chr3_3:57718214-57718233 | Msa0460400:CDS | 35.0% |
| TATTCTTCAACTCCCAATTC+CGG | - | chr3_3:57718236-57718255 | None:intergenic | 35.0% | |
| AACAGCATCAGTAACATCAA+TGG | - | chr3_3:57718265-57718284 | None:intergenic | 35.0% | |
| ATTGATGTTACTGATGCTGT+TGG | + | chr3_3:57718264-57718283 | Msa0460400:CDS | 35.0% | |
| CCACAAGAAAATTGAAGCTT+TGG | - | chr3_3:57718397-57718416 | None:intergenic | 35.0% | |
| ! | CCAAAGCTTCAATTTTCTTG+TGG | + | chr3_3:57718394-57718413 | Msa0460400:intron | 35.0% |
| AACTCTTGCAAGAAAAACCA+TGG | + | chr3_3:57718432-57718451 | Msa0460400:intron | 35.0% | |
| ! | CATAAGTACTTAAGGTACCA+TGG | - | chr3_3:57718452-57718471 | None:intergenic | 35.0% |
| AATCGATGCTTACCAAAAGT+TGG | + | chr3_3:57718554-57718573 | Msa0460400:intron | 35.0% | |
| ! | AATTCACTGGTACCAACTTT+TGG | - | chr3_3:57718569-57718588 | None:intergenic | 35.0% |
| AAATCAAGGTCAGAATTCAC+TGG | - | chr3_3:57718582-57718601 | None:intergenic | 35.0% | |
| ACATGTGTAATGTGTTTCAG+AGG | - | chr3_3:57718702-57718721 | None:intergenic | 35.0% | |
| CACATTACACATGTTGTGTT+TGG | + | chr3_3:57718708-57718727 | Msa0460400:intron | 35.0% | |
| ! | TAGCAATGATTGCATTGATG+TGG | + | chr3_3:57718788-57718807 | Msa0460400:intron | 35.0% |
| ! | AGCAATGATTGCATTGATGT+GGG | + | chr3_3:57718789-57718808 | Msa0460400:intron | 35.0% |
| TTTACAGACTGGTAAGCTAA+AGG | - | chr3_3:57719041-57719060 | None:intergenic | 35.0% | |
| TTACCAGTCTGTAAATGCTA+TGG | + | chr3_3:57719046-57719065 | Msa0460400:intron | 35.0% | |
| TACCAGTCTGTAAATGCTAT+GGG | + | chr3_3:57719047-57719066 | Msa0460400:intron | 35.0% | |
| AGGGATAACAATTAAGAAGC+TGG | + | chr3_3:57719082-57719101 | Msa0460400:intron | 35.0% | |
| CATGAATCATGAAGTAACCT+TGG | + | chr3_3:57719140-57719159 | Msa0460400:intron | 35.0% | |
| ! | TGCACATTTTATACAGTCCA+AGG | - | chr3_3:57719160-57719179 | None:intergenic | 35.0% |
| TAGTGAAAAATTAGCATGGG+AGG | - | chr3_3:57719214-57719233 | None:intergenic | 35.0% | |
| ! | TCCCATGCTAATTTTTCACT+AGG | + | chr3_3:57719213-57719232 | Msa0460400:intron | 35.0% |
| CCCTAGTGAAAAATTAGCAT+GGG | - | chr3_3:57719217-57719236 | None:intergenic | 35.0% | |
| ! | CCCATGCTAATTTTTCACTA+GGG | + | chr3_3:57719214-57719233 | Msa0460400:intron | 35.0% |
| ACCCTAGTGAAAAATTAGCA+TGG | - | chr3_3:57719218-57719237 | None:intergenic | 35.0% | |
| CGGATACACATTCAACTAAA+TGG | + | chr3_3:57719253-57719272 | Msa0460400:intron | 35.0% | |
| TTCAACAATGGCTATGATAG+TGG | + | chr3_3:57719393-57719412 | Msa0460400:intron | 35.0% | |
| ! | CTTGTTTCTTCACAACATGA+GGG | - | chr3_3:57719497-57719516 | None:intergenic | 35.0% |
| ! | ACTTGTTTCTTCACAACATG+AGG | - | chr3_3:57719498-57719517 | None:intergenic | 35.0% |
| ! | TGATGATGACGAAAATATGC+AGG | + | chr3_3:57719534-57719553 | Msa0460400:intron | 35.0% |
| ! | GATGATGACGAAAATATGCA+GGG | + | chr3_3:57719535-57719554 | Msa0460400:intron | 35.0% |
| ! | ATGATGACGAAAATATGCAG+GGG | + | chr3_3:57719536-57719555 | Msa0460400:intron | 35.0% |
| AAGATACTTGACCCATTGTT+TGG | - | chr3_3:57719680-57719699 | None:intergenic | 35.0% | |
| TGTCTAACAAATGTTTACGG+CGG | + | chr3_3:57719743-57719762 | Msa0460400:intron | 35.0% | |
| ! | TCTCGCTATAGCATTTTAAG+GGG | + | chr3_3:57719945-57719964 | Msa0460400:intron | 35.0% |
| !! | AAAACCCGCTTTTGTTATGA+TGG | + | chr3_3:57720681-57720700 | Msa0460400:CDS | 35.0% |
| CAAACCATCATAACAAAAGC+GGG | - | chr3_3:57720688-57720707 | None:intergenic | 35.0% | |
| TTAAATGACCCTATGATTCG+TGG | + | chr3_3:57720720-57720739 | Msa0460400:CDS | 35.0% | |
| AAGATTTCTTAAACAGGCTG+GGG | + | chr3_3:57720880-57720899 | Msa0460400:CDS | 35.0% | |
| !! | ACTAATGCTGATTTCAGATC+AGG | + | chr3_3:57720939-57720958 | Msa0460400:CDS | 35.0% |
| TCATAGTTGAAATCAGTAGC+AGG | - | chr3_3:57721405-57721424 | None:intergenic | 35.0% | |
| !! | GCAATTTCAAGAAGTGTTTG+AGG | - | chr3_3:57721450-57721469 | None:intergenic | 35.0% |
| AACACTTCTTGAAATTGCTG+AGG | + | chr3_3:57721452-57721471 | Msa0460400:CDS | 35.0% | |
| ACACTTCTTGAAATTGCTGA+GGG | + | chr3_3:57721453-57721472 | Msa0460400:CDS | 35.0% | |
| TTGAAACCATCGCAAAACAA+GGG | + | chr3_3:57721580-57721599 | Msa0460400:CDS | 35.0% | |
| !!! | TCAAGGCTTTTTTCAGATTG+GGG | - | chr3_3:57721690-57721709 | None:intergenic | 35.0% |
| !! | AAACAACAAAAGCATCCTTC+GGG | - | chr3_3:57721767-57721786 | None:intergenic | 35.0% |
| GATAAACACTCTTATCACCA+TGG | - | chr3_3:57721800-57721819 | None:intergenic | 35.0% | |
| CGTTTACCCTATGATACAAT+TGG | + | chr3_3:57721981-57722000 | Msa0460400:CDS | 35.0% | |
| TTACCCTATGATACAATTGG+GGG | + | chr3_3:57721984-57722003 | Msa0460400:CDS | 35.0% | |
| ATATGACTGATGCAATTACC+AGG | + | chr3_3:57722150-57722169 | Msa0460400:CDS | 35.0% | |
| TATGACTGATGCAATTACCA+GGG | + | chr3_3:57722151-57722170 | Msa0460400:CDS | 35.0% | |
| ! | GTTTCGTGTTTTTCTTTTCC+TGG | + | chr3_3:57722262-57722281 | Msa0460400:three_prime_UTR | 35.0% |
| CCAGCAAAATACAAATGGAA+TGG | - | chr3_3:57722342-57722361 | None:intergenic | 35.0% | |
| ! | CCATTCCATTTGTATTTTGC+TGG | + | chr3_3:57722339-57722358 | Msa0460400:three_prime_UTR | 35.0% |
| ! | AGCAAACCCGAATCTGAAAT+CGG | + | chr3_3:57715459-57715478 | Msa0460400:CDS | 40.0% |
| GATGATCCGATTTCAGATTC+GGG | - | chr3_3:57715468-57715487 | None:intergenic | 40.0% | |
| GGATGATCCGATTTCAGATT+CGG | - | chr3_3:57715469-57715488 | None:intergenic | 40.0% | |
| ! | AATGGTGATGCGAGTGTATA+TGG | - | chr3_3:57715545-57715564 | None:intergenic | 40.0% |
| !! | TGTTGTTGATTTGGGGGAAA+TGG | - | chr3_3:57715563-57715582 | None:intergenic | 40.0% |
| !! | GATCTGTGTTGTTGATTTGG+GGG | - | chr3_3:57715569-57715588 | None:intergenic | 40.0% |
| TCTAACATCCACCCTAACAA+TGG | + | chr3_3:57715587-57715606 | Msa0460400:CDS | 40.0% | |
| CTAACATCCACCCTAACAAT+GGG | + | chr3_3:57715588-57715607 | Msa0460400:CDS | 40.0% | |
| TAACATCCACCCTAACAATG+GGG | + | chr3_3:57715589-57715608 | Msa0460400:CDS | 40.0% | |
| TACCCCGTTAAAATTCCGAA+AGG | + | chr3_3:57715834-57715853 | Msa0460400:CDS | 40.0% | |
| CATACGACAATTTCCAGCAA+TGG | - | chr3_3:57715931-57715950 | None:intergenic | 40.0% | |
| ! | TTGTCGTATGTGTCTTGTTG+AGG | + | chr3_3:57715941-57715960 | Msa0460400:CDS | 40.0% |
| AAGAATCTAACCAGGAAGAG+CGG | - | chr3_3:57716006-57716025 | None:intergenic | 40.0% | |
| GTTGTGTGTAAATGGAGTGT+TGG | + | chr3_3:57716125-57716144 | Msa0460400:intron | 40.0% | |
| !! | TGTGTAAATGGAGTGTTGGA+TGG | + | chr3_3:57716129-57716148 | Msa0460400:intron | 40.0% |
| TGGATGGTAAAGAACAACAC+CGG | + | chr3_3:57716145-57716164 | Msa0460400:intron | 40.0% | |
| AACAAACGCACCCTAAATCA+TGG | - | chr3_3:57716228-57716247 | None:intergenic | 40.0% | |
| ! | ACCATCTTTTCTCCAATAGG+TGG | - | chr3_3:57716498-57716517 | None:intergenic | 40.0% |
| ! | AAGGAGAGTATATCAGATGG+AGG | + | chr3_3:57716575-57716594 | Msa0460400:intron | 40.0% |
| TGGCTACATGTATCAAACAC+CGG | - | chr3_3:57716716-57716735 | None:intergenic | 40.0% | |
| CTTATTCCACTAAGTGTGGT+TGG | - | chr3_3:57716736-57716755 | None:intergenic | 40.0% | |
| CAACCACACTTAGTGGAATA+AGG | + | chr3_3:57716734-57716753 | Msa0460400:intron | 40.0% | |
| !! | AAGCCTTATTCCACTAAGTG+TGG | - | chr3_3:57716740-57716759 | None:intergenic | 40.0% |
| AGATTGCCCAATTTGTGATC+AGG | + | chr3_3:57717355-57717374 | Msa0460400:CDS | 40.0% | |
| GATTGCCCAATTTGTGATCA+GGG | + | chr3_3:57717356-57717375 | Msa0460400:CDS | 40.0% | |
| TGATCTTCAGGATCAGTCAA+TGG | + | chr3_3:57717388-57717407 | Msa0460400:CDS | 40.0% | |
| CACTGATATGAAGAGATCTG+TGG | + | chr3_3:57717436-57717455 | Msa0460400:CDS | 40.0% | |
| TGATATGAAGAGATCTGTGG+TGG | + | chr3_3:57717439-57717458 | Msa0460400:CDS | 40.0% | |
| GTCATCACAGTCTTTACCAA+AGG | - | chr3_3:57717479-57717498 | None:intergenic | 40.0% | |
| TGGTAAAGACTGTGATGACA+CGG | + | chr3_3:57717480-57717499 | Msa0460400:CDS | 40.0% | |
| ! | TAGTTTCTGAGGGAACTTAC+GGG | + | chr3_3:57717754-57717773 | Msa0460400:intron | 40.0% |
| TAACGACATCTGGTAGCAAT+AGG | + | chr3_3:57717894-57717913 | Msa0460400:intron | 40.0% | |
| ! | TCTGAGTTCCTTAATGGATC+CGG | + | chr3_3:57718009-57718028 | Msa0460400:intron | 40.0% |
| GTAATAGATATCTGCCCTGT+AGG | + | chr3_3:57718177-57718196 | Msa0460400:CDS | 40.0% | |
| !! | TTCCGGGCTTTAAATGCAAA+AGG | - | chr3_3:57718219-57718238 | None:intergenic | 40.0% |
| ! | TTGCATTTAAAGCCCGGAAT+TGG | + | chr3_3:57718220-57718239 | Msa0460400:CDS | 40.0% |
| ! | TGCATTTAAAGCCCGGAATT+GGG | + | chr3_3:57718221-57718240 | Msa0460400:CDS | 40.0% |
| ATTCTTCAACTCCCAATTCC+GGG | - | chr3_3:57718235-57718254 | None:intergenic | 40.0% | |
| CATTGTGCCTCGTTTAAATG+AGG | + | chr3_3:57718329-57718348 | Msa0460400:CDS | 40.0% | |
| GATCTCAAGCCTTTGGTTAT+GGG | + | chr3_3:57718998-57719017 | Msa0460400:intron | 40.0% | |
| ACCAGTCTGTAAATGCTATG+GGG | + | chr3_3:57719048-57719067 | Msa0460400:intron | 40.0% | |
| CTATGGGGATGAGTATTTGA+GGG | + | chr3_3:57719063-57719082 | Msa0460400:intron | 40.0% | |
| CTTTCAATAGCGTGCTATAG+CGG | + | chr3_3:57719317-57719336 | Msa0460400:intron | 40.0% | |
| ! | TGGCCCATTTGTTAGACATT+AGG | - | chr3_3:57719703-57719722 | None:intergenic | 40.0% |
| !!! | GATATTTTGGCGGTAACAAG+GGG | - | chr3_3:57720003-57720022 | None:intergenic | 40.0% |
| !!! | CGATATTTTGGCGGTAACAA+GGG | - | chr3_3:57720004-57720023 | None:intergenic | 40.0% |
| !!! | TCGATATTTTGGCGGTAACA+AGG | - | chr3_3:57720005-57720024 | None:intergenic | 40.0% |
| AATTCGTGACGTTGTGTACA+GGG | - | chr3_3:57720419-57720438 | None:intergenic | 40.0% | |
| AAATTCGTGACGTTGTGTAC+AGG | - | chr3_3:57720420-57720439 | None:intergenic | 40.0% | |
| CTTCTAATCCCTGTGTTATG+CGG | + | chr3_3:57720464-57720483 | Msa0460400:intron | 40.0% | |
| TTCTAATCCCTGTGTTATGC+GGG | + | chr3_3:57720465-57720484 | Msa0460400:intron | 40.0% | |
| CAACTAGTTAAGTTCCAGTG+AGG | + | chr3_3:57720506-57720525 | Msa0460400:intron | 40.0% | |
| GATGCGATTTAGTGTTCTCT+GGG | + | chr3_3:57720542-57720561 | Msa0460400:intron | 40.0% | |
| ATGCGATTTAGTGTTCTCTG+GGG | + | chr3_3:57720543-57720562 | Msa0460400:intron | 40.0% | |
| CTTCGTTTATGTCCTGCAAT+GGG | - | chr3_3:57720647-57720666 | None:intergenic | 40.0% | |
| TCTTCGTTTATGTCCTGCAA+TGG | - | chr3_3:57720648-57720667 | None:intergenic | 40.0% | |
| AACCTCTGCTACCAAAGAAA+GGG | - | chr3_3:57720784-57720803 | None:intergenic | 40.0% | |
| GCTGGGGTCAAATAATGTAT+GGG | + | chr3_3:57720896-57720915 | Msa0460400:CDS | 40.0% | |
| CTGGGGTCAAATAATGTATG+GGG | + | chr3_3:57720897-57720916 | Msa0460400:CDS | 40.0% | |
| TCAAATAATGTATGGGGCGA+AGG | + | chr3_3:57720903-57720922 | Msa0460400:CDS | 40.0% | |
| !! | CGATTCCTTTTTAGCCCTTT+GGG | + | chr3_3:57721112-57721131 | Msa0460400:intron | 40.0% |
| AAATCCAGTGCAATCCCAAA+GGG | - | chr3_3:57721129-57721148 | None:intergenic | 40.0% | |
| TAGAATACGCAAGACTGTCA+CGG | + | chr3_3:57721350-57721369 | Msa0460400:CDS | 40.0% | |
| GATAACGAACATCTTGGTAC+TGG | + | chr3_3:57721423-57721442 | Msa0460400:CDS | 40.0% | |
| CAGCACCAACAATGATAACA+GGG | - | chr3_3:57721518-57721537 | None:intergenic | 40.0% | |
| ! | CTGTTATCATTGTTGGTGCT+GGG | + | chr3_3:57721517-57721536 | Msa0460400:CDS | 40.0% |
| !! | GATTTTTGAGAGGAAGGATC+AGG | + | chr3_3:57721539-57721558 | Msa0460400:CDS | 40.0% |
| GTTGAAACCATCGCAAAACA+AGG | + | chr3_3:57721579-57721598 | Msa0460400:CDS | 40.0% | |
| GGAATGTCATCAGATCTGAT+TGG | + | chr3_3:57721601-57721620 | Msa0460400:CDS | 40.0% | |
| GTCATCAGATCTGATTGGAA+TGG | + | chr3_3:57721606-57721625 | Msa0460400:CDS | 40.0% | |
| GTTGTTTATCAAGGTCACCA+TGG | + | chr3_3:57721780-57721799 | Msa0460400:CDS | 40.0% | |
| ACTCCCCCAATTGTATCATA+GGG | - | chr3_3:57721990-57722009 | None:intergenic | 40.0% | |
| AACTCCCCCAATTGTATCAT+AGG | - | chr3_3:57721991-57722010 | None:intergenic | 40.0% | |
| ! | TACCAGGGCATCAAAGATAA+TGG | + | chr3_3:57722166-57722185 | Msa0460400:CDS | 40.0% |
| TGCGAGTGTATATGGAGAGT+GGG | - | chr3_3:57715537-57715556 | None:intergenic | 45.0% | |
| ATGCGAGTGTATATGGAGAG+TGG | - | chr3_3:57715538-57715557 | None:intergenic | 45.0% | |
| AAAACCTCGATAGCGTCATC+GGG | - | chr3_3:57715804-57715823 | None:intergenic | 45.0% | |
| GAAAACCTCGATAGCGTCAT+CGG | - | chr3_3:57715805-57715824 | None:intergenic | 45.0% | |
| CATAGCAGACTTTCCATTGC+TGG | + | chr3_3:57715915-57715934 | Msa0460400:CDS | 45.0% | |
| AGAATCTAACCAGGAAGAGC+GGG | - | chr3_3:57716005-57716024 | None:intergenic | 45.0% | |
| GCCACCTATTGGAGAAAAGA+TGG | + | chr3_3:57716494-57716513 | Msa0460400:intron | 45.0% | |
| TGGTAGAAACTCGGCATATG+TGG | + | chr3_3:57716514-57716533 | Msa0460400:intron | 45.0% | |
| GAGGATAGTCAGATCACTAG+AGG | + | chr3_3:57716594-57716613 | Msa0460400:intron | 45.0% | |
| AGTCAGATCACTAGAGGTAG+AGG | + | chr3_3:57716600-57716619 | Msa0460400:intron | 45.0% | |
| ATGTAGCCAACCACACTTAG+TGG | + | chr3_3:57716727-57716746 | Msa0460400:intron | 45.0% | |
| TCTCGTGCTTTCTTGGCTAT+AGG | - | chr3_3:57717299-57717318 | None:intergenic | 45.0% | |
| ! | ATAGCCAAGAAAGCACGAGA+AGG | + | chr3_3:57717299-57717318 | Msa0460400:CDS | 45.0% |
| CTCCACCCTGATCACAAATT+GGG | - | chr3_3:57717364-57717383 | None:intergenic | 45.0% | |
| TCTCCACCCTGATCACAAAT+TGG | - | chr3_3:57717365-57717384 | None:intergenic | 45.0% | |
| CAGGATCAGTCAATGGCATT+TGG | + | chr3_3:57717395-57717414 | Msa0460400:CDS | 45.0% | |
| CACGGTGCATTCAATGTACA+AGG | + | chr3_3:57717498-57717517 | Msa0460400:CDS | 45.0% | |
| CATCTGGTAGCAATAGGTGT+TGG | + | chr3_3:57717900-57717919 | Msa0460400:intron | 45.0% | |
| GCTCCCAAATGTTGAAGGTT+GGG | - | chr3_3:57717939-57717958 | None:intergenic | 45.0% | |
| TGCGAATCTAACACACCTGT+GGG | - | chr3_3:57718052-57718071 | None:intergenic | 45.0% | |
| ATGCGAATCTAACACACCTG+TGG | - | chr3_3:57718053-57718072 | None:intergenic | 45.0% | |
| GTGTGTTAGATTCGCATCAG+AGG | + | chr3_3:57718056-57718075 | Msa0460400:CDS | 45.0% | |
| GTTCAGGATCTTGGCATGTT+AGG | + | chr3_3:57718087-57718106 | Msa0460400:CDS | 45.0% | |
| CTCATGACAAGTGAACTCTC+TGG | + | chr3_3:57718150-57718169 | Msa0460400:CDS | 45.0% | |
| TTGAAGTGAGTGCTCCTACA+GGG | - | chr3_3:57718194-57718213 | None:intergenic | 45.0% | |
| ! | TTTGAAGTGAGTGCTCCTAC+AGG | - | chr3_3:57718195-57718214 | None:intergenic | 45.0% |
| TACTTGCGATCTCAAGCCTT+TGG | + | chr3_3:57718991-57719010 | Msa0460400:intron | 45.0% | |
| CGATCTCAAGCCTTTGGTTA+TGG | + | chr3_3:57718997-57719016 | Msa0460400:intron | 45.0% | |
| ACGCAATTGCCCATAACCAA+AGG | - | chr3_3:57719010-57719029 | None:intergenic | 45.0% | |
| GGTTATGGGCAATTGCGTTA+AGG | + | chr3_3:57719012-57719031 | Msa0460400:intron | 45.0% | |
| TCCCCATAGCATTTACAGAC+TGG | - | chr3_3:57719052-57719071 | None:intergenic | 45.0% | |
| GCTATGGGGATGAGTATTTG+AGG | + | chr3_3:57719062-57719081 | Msa0460400:intron | 45.0% | |
| ! | GAAGCACCATTGCAGGAAAA+TGG | - | chr3_3:57719376-57719395 | None:intergenic | 45.0% |
| ! | CATTGTTGAAGCACCATTGC+AGG | - | chr3_3:57719383-57719402 | None:intergenic | 45.0% |
| CTGCAATGGTGCTTCAACAA+TGG | + | chr3_3:57719381-57719400 | Msa0460400:intron | 45.0% | |
| !! | ATGATAGTGGCCGCAAATAG+CGG | + | chr3_3:57719406-57719425 | Msa0460400:intron | 45.0% |
| CATGTTTCCACCGCTATTTG+CGG | - | chr3_3:57719419-57719438 | None:intergenic | 45.0% | |
| GTTTCTTCACAACATGAGGG+TGG | - | chr3_3:57719494-57719513 | None:intergenic | 45.0% | |
| TGACTGATGTAGTGTTGCAG+AGG | + | chr3_3:57719564-57719583 | Msa0460400:intron | 45.0% | |
| GACTTGGGAATCTATGCACA+CGG | - | chr3_3:57720396-57720415 | None:intergenic | 45.0% | |
| ATTCGTGACGTTGTGTACAG+GGG | - | chr3_3:57720418-57720437 | None:intergenic | 45.0% | |
| TCTAATCCCTGTGTTATGCG+GGG | + | chr3_3:57720466-57720485 | Msa0460400:intron | 45.0% | |
| TTGATTCCCCGCATAACACA+GGG | - | chr3_3:57720475-57720494 | None:intergenic | 45.0% | |
| CGATGCGATTTAGTGTTCTC+TGG | + | chr3_3:57720541-57720560 | Msa0460400:intron | 45.0% | |
| TTGTTCCACTTTCCCATTGC+AGG | + | chr3_3:57720632-57720651 | Msa0460400:intron | 45.0% | |
| TATGTCCTGCAATGGGAAAG+TGG | - | chr3_3:57720640-57720659 | None:intergenic | 45.0% | |
| TGCAGGACATAAACGAAGAG+TGG | + | chr3_3:57720649-57720668 | Msa0460400:intron | 45.0% | |
| ATGATGGTTTGAAGAGGCAG+AGG | + | chr3_3:57720697-57720716 | Msa0460400:CDS | 45.0% | |
| CATCAGGACCACGAATCATA+GGG | - | chr3_3:57720731-57720750 | None:intergenic | 45.0% | |
| CAACCTCTGCTACCAAAGAA+AGG | - | chr3_3:57720785-57720804 | None:intergenic | 45.0% | |
| GGCTGGGGTCAAATAATGTA+TGG | + | chr3_3:57720895-57720914 | Msa0460400:CDS | 45.0% | |
| AATGTATGGGGCGAAGGAAT+TGG | + | chr3_3:57720909-57720928 | Msa0460400:CDS | 45.0% | |
| GAAAGCAGATGCTTTCCTGT+TGG | + | chr3_3:57720995-57721014 | Msa0460400:CDS | 45.0% | |
| !! | GCGATTCCTTTTTAGCCCTT+TGG | + | chr3_3:57721111-57721130 | Msa0460400:intron | 45.0% |
| GCAATCCCAAAGGGCTAAAA+AGG | - | chr3_3:57721120-57721139 | None:intergenic | 45.0% | |
| GAAATCCAGTGCAATCCCAA+AGG | - | chr3_3:57721130-57721149 | None:intergenic | 45.0% | |
| CACTTCCAAATTTGCAGCCA+CGG | + | chr3_3:57721304-57721323 | Msa0460400:intron | 45.0% | |
| ACTTCCAAATTTGCAGCCAC+GGG | + | chr3_3:57721305-57721324 | Msa0460400:intron | 45.0% | |
| AAGCCAAGGTCGGTTACATT+GGG | + | chr3_3:57721379-57721398 | Msa0460400:CDS | 45.0% | |
| CCAGCACCAACAATGATAAC+AGG | - | chr3_3:57721519-57721538 | None:intergenic | 45.0% | |
| CCTGTTATCATTGTTGGTGC+TGG | + | chr3_3:57721516-57721535 | Msa0460400:CDS | 45.0% | |
| !!! | TTGGTGCTGGGATTTTTGAG+AGG | + | chr3_3:57721529-57721548 | Msa0460400:CDS | 45.0% |
| !! | TGCTGGGATTTTTGAGAGGA+AGG | + | chr3_3:57721533-57721552 | Msa0460400:CDS | 45.0% |
| !!! | GACATTCCCTTGTTTTGCGA+TGG | - | chr3_3:57721589-57721608 | None:intergenic | 45.0% |
| GGGAGCTGATGATACAAACT+TGG | + | chr3_3:57721734-57721753 | Msa0460400:CDS | 45.0% | |
| AAACTTGGACAAGATCCCGA+AGG | + | chr3_3:57721749-57721768 | Msa0460400:CDS | 45.0% | |
| AAGGATGCACACAGCAAACA+TGG | + | chr3_3:57721883-57721902 | Msa0460400:CDS | 45.0% | |
| TTGGAGACTCCAGAGATGAT+TGG | + | chr3_3:57721922-57721941 | Msa0460400:CDS | 45.0% | |
| !! | AAGGTTGGTCTCAGTGAAGA+TGG | - | chr3_3:57722080-57722099 | None:intergenic | 45.0% |
| GAGACCAACCTTCACTAAGA+AGG | + | chr3_3:57722088-57722107 | Msa0460400:CDS | 45.0% | |
| ACCAACCTTCACTAAGAAGG+TGG | + | chr3_3:57722091-57722110 | Msa0460400:CDS | 45.0% | |
| TCCACCTTCTTAGTGAAGGT+TGG | - | chr3_3:57722095-57722114 | None:intergenic | 45.0% | |
| TGGATCCACCTTCTTAGTGA+AGG | - | chr3_3:57722099-57722118 | None:intergenic | 45.0% | |
| AAGGTGGATCCATCACCATT+CGG | + | chr3_3:57722107-57722126 | Msa0460400:CDS | 45.0% | |
| AGCCATTATCTTTGATGCCC+TGG | - | chr3_3:57722171-57722190 | None:intergenic | 45.0% | |
| TATCGTACTATCCGCAAGCA+AGG | - | chr3_3:57722298-57722317 | None:intergenic | 45.0% | |
| GGACTAACCCGAATTGTACA+TGG | - | chr3_3:57722394-57722413 | None:intergenic | 45.0% | |
| !! | TATATATATATTAAATTAAG+TGG | + | chr3_3:57717711-57717730 | Msa0460400:intron | 5.0% |
| ATATGGAGAGTGGGGTGAGA+GGG | - | chr3_3:57715528-57715547 | None:intergenic | 50.0% | |
| TATATGGAGAGTGGGGTGAG+AGG | - | chr3_3:57715529-57715548 | None:intergenic | 50.0% | |
| GCGAGTGTATATGGAGAGTG+GGG | - | chr3_3:57715536-57715555 | None:intergenic | 50.0% | |
| TCCACCCTAACAATGGGGTT+TGG | + | chr3_3:57715594-57715613 | Msa0460400:CDS | 50.0% | |
| ACCAAACCCCATTGTTAGGG+TGG | - | chr3_3:57715598-57715617 | None:intergenic | 50.0% | |
| !! | GTTTGGTGGTGATTGAACGG+AGG | - | chr3_3:57715674-57715693 | None:intergenic | 50.0% |
| !! | CGGGTTTGGTGGTGATTGAA+CGG | - | chr3_3:57715677-57715696 | None:intergenic | 50.0% |
| !! | ACGAGAGGTTGTTCAGGTTG+GGG | - | chr3_3:57715729-57715748 | None:intergenic | 50.0% |
| ! | GACGAGAGGTTGTTCAGGTT+GGG | - | chr3_3:57715730-57715749 | None:intergenic | 50.0% |
| AGATCGACGAGAGGTTGTTC+AGG | - | chr3_3:57715735-57715754 | None:intergenic | 50.0% | |
| TCGATAGCGTCATCGGGATT+GGG | - | chr3_3:57715798-57715817 | None:intergenic | 50.0% | |
| ! | GCTATCGAGGTTTTCGTCGA+TGG | + | chr3_3:57715810-57715829 | Msa0460400:CDS | 50.0% |
| CTCTGTTCTTCAAGCGTGTG+AGG | + | chr3_3:57715860-57715879 | Msa0460400:CDS | 50.0% | |
| CACTCCTTCTCGTGCTTTCT+TGG | - | chr3_3:57717306-57717325 | None:intergenic | 50.0% | |
| ! | GAAAGCACGAGAAGGAGTGA+TGG | + | chr3_3:57717307-57717326 | Msa0460400:CDS | 50.0% |
| TGCCCAATTTGTGATCAGGG+TGG | + | chr3_3:57717359-57717378 | Msa0460400:CDS | 50.0% | |
| !! | ATGGCATTTGGCTCTGATCG+TGG | + | chr3_3:57717407-57717426 | Msa0460400:CDS | 50.0% |
| ACTTGCTCTCATGTCAGCTC+AGG | + | chr3_3:57717843-57717862 | Msa0460400:intron | 50.0% | |
| CTTGCTCTCATGTCAGCTCA+GGG | + | chr3_3:57717844-57717863 | Msa0460400:intron | 50.0% | |
| GGCTCCCAAATGTTGAAGGT+TGG | - | chr3_3:57717940-57717959 | None:intergenic | 50.0% | |
| GGATGGCTCCCAAATGTTGA+AGG | - | chr3_3:57717944-57717963 | None:intergenic | 50.0% | |
| AGATTCGCATCAGAGGTTGC+AGG | + | chr3_3:57718063-57718082 | Msa0460400:CDS | 50.0% | |
| GATTCGCATCAGAGGTTGCA+GGG | + | chr3_3:57718064-57718083 | Msa0460400:CDS | 50.0% | |
| ATTCGCATCAGAGGTTGCAG+GGG | + | chr3_3:57718065-57718084 | Msa0460400:CDS | 50.0% | |
| GATCTTGGCATGTTAGGTCG+TGG | + | chr3_3:57718093-57718112 | Msa0460400:CDS | 50.0% | |
| !! | CGTGGTAGTGGAGAAGAGAT+TGG | + | chr3_3:57718111-57718130 | Msa0460400:CDS | 50.0% |
| TGCAGGAAAATGGCTTCGCA+GGG | - | chr3_3:57719366-57719385 | None:intergenic | 50.0% | |
| TTGCAGGAAAATGGCTTCGC+AGG | - | chr3_3:57719367-57719386 | None:intergenic | 50.0% | |
| !! | GCGAAGCCATTTTCCTGCAA+TGG | + | chr3_3:57719367-57719386 | Msa0460400:intron | 50.0% |
| GACGAAAATATGCAGGGGCA+CGG | + | chr3_3:57719541-57719560 | Msa0460400:intron | 50.0% | |
| !!! | AGTGTTGCAGAGGTGCCTTT+TGG | + | chr3_3:57719574-57719593 | Msa0460400:intron | 50.0% |
| TCTCCCAAGTCTCACTGTCA+GGG | - | chr3_3:57720366-57720385 | None:intergenic | 50.0% | |
| ACGTTGTGTACAGGGGACTT+GGG | - | chr3_3:57720411-57720430 | None:intergenic | 50.0% | |
| ! | GTTGATTCCCCGCATAACAC+AGG | - | chr3_3:57720476-57720495 | None:intergenic | 50.0% |
| CCATCAGGACCACGAATCAT+AGG | - | chr3_3:57720732-57720751 | None:intergenic | 50.0% | |
| CCTATGATTCGTGGTCCTGA+TGG | + | chr3_3:57720729-57720748 | Msa0460400:CDS | 50.0% | |
| GCCAGTTCACAGGCTTAAAG+CGG | - | chr3_3:57720755-57720774 | None:intergenic | 50.0% | |
| ! | AGCCCTTTCTTTGGTAGCAG+AGG | + | chr3_3:57720779-57720798 | Msa0460400:CDS | 50.0% |
| GCAGATGCTTTCCTGTTGGT+TGG | + | chr3_3:57720999-57721018 | Msa0460400:CDS | 50.0% | |
| !! | TTAGCCCTTTGGGATTGCAC+TGG | + | chr3_3:57721122-57721141 | Msa0460400:intron | 50.0% |
| CAATGTAACCGACCTTGGCT+TGG | - | chr3_3:57721380-57721399 | None:intergenic | 50.0% | |
| CAAGCCAAGGTCGGTTACAT+TGG | + | chr3_3:57721378-57721397 | Msa0460400:CDS | 50.0% | |
| ATTACTTCTCCATGCTGCCC+AGG | + | chr3_3:57721638-57721657 | Msa0460400:CDS | 50.0% | |
| TTCTCACTGAATGCAGCTGC+TGG | - | chr3_3:57721840-57721859 | None:intergenic | 50.0% | |
| AGCAGCTGCATTCAGTGAGA+AGG | + | chr3_3:57721839-57721858 | Msa0460400:CDS | 50.0% | |
| GCTGCATTCAGTGAGAAGGA+AGG | + | chr3_3:57721843-57721862 | Msa0460400:CDS | 50.0% | |
| TCTCCAACTGTTGGAACTGC+AGG | - | chr3_3:57721909-57721928 | None:intergenic | 50.0% | |
| !! | TCTCTGGAGTCTCCAACTGT+TGG | - | chr3_3:57721918-57721937 | None:intergenic | 50.0% |
| TAAACGCACCCCTGCTATCT+CGG | - | chr3_3:57721967-57721986 | None:intergenic | 50.0% | |
| TCGTCCATTTGCGCAAGGTT+TGG | - | chr3_3:57722038-57722057 | None:intergenic | 50.0% | |
| AGTGAAGATGGCAATGCAGC+TGG | - | chr3_3:57722068-57722087 | None:intergenic | 50.0% | |
| AGGTGGATCCATCACCATTC+GGG | + | chr3_3:57722108-57722127 | Msa0460400:CDS | 50.0% | |
| TCCATCACCATTCGGGATTG+CGG | + | chr3_3:57722115-57722134 | Msa0460400:CDS | 50.0% | |
| TTCTCAACCGCAATCCCGAA+TGG | - | chr3_3:57722125-57722144 | None:intergenic | 50.0% | |
| !! | GGTGGTGGTGGTTTGACGAA+AGG | - | chr3_3:57715637-57715656 | None:intergenic | 55.0% |
| TGATTGAACGGAGGAGGAGG+AGG | - | chr3_3:57715665-57715684 | None:intergenic | 55.0% | |
| TGGTGATTGAACGGAGGAGG+AGG | - | chr3_3:57715668-57715687 | None:intergenic | 55.0% | |
| ! | TGGTGGTGATTGAACGGAGG+AGG | - | chr3_3:57715671-57715690 | None:intergenic | 55.0% |
| ! | TTTGCGGAGTTCGGGTTTGG+TGG | - | chr3_3:57715688-57715707 | None:intergenic | 55.0% |
| !! | TTGTTCAGGTTGGGGCTGAG+CGG | - | chr3_3:57715721-57715740 | None:intergenic | 55.0% |
| CGACGAGAGGTTGTTCAGGT+TGG | - | chr3_3:57715731-57715750 | None:intergenic | 55.0% | |
| ATGTACTCTAGCGCCAGCGA+CGG | - | chr3_3:57715772-57715791 | None:intergenic | 55.0% | |
| CGATAGCGTCATCGGGATTG+GGG | - | chr3_3:57715797-57715816 | None:intergenic | 55.0% | |
| CTCGATAGCGTCATCGGGAT+TGG | - | chr3_3:57715799-57715818 | None:intergenic | 55.0% | |
| CAATCCCGATGACGCTATCG+AGG | + | chr3_3:57715797-57715816 | Msa0460400:CDS | 55.0% | |
| CTTCAAGCGTGTGAGGTTGC+TGG | + | chr3_3:57715867-57715886 | Msa0460400:CDS | 55.0% | |
| GCGCAAGAAGCAACAGGCTT+AGG | - | chr3_3:57715978-57715997 | None:intergenic | 55.0% | |
| GAGTTGGGGTAGCCACCTAT+TGG | + | chr3_3:57716483-57716502 | Msa0460400:intron | 55.0% | |
| ! | GGGTGGAGAGTGTGATCTTC+AGG | + | chr3_3:57717376-57717395 | Msa0460400:CDS | 55.0% |
| ATCAGAGGTTGCAGGGGTTC+AGG | + | chr3_3:57718071-57718090 | Msa0460400:CDS | 55.0% | |
| GTTGCAGGGGTTCAGGATCT+TGG | + | chr3_3:57718078-57718097 | Msa0460400:CDS | 55.0% | |
| GGCATGTTAGGTCGTGGTAG+TGG | + | chr3_3:57718099-57718118 | Msa0460400:CDS | 55.0% | |
| GGCACAATGCGCATGACTTC+AGG | - | chr3_3:57718318-57718337 | None:intergenic | 55.0% | |
| TCACTAGGGTCGCAGTGAAC+AGG | + | chr3_3:57719228-57719247 | Msa0460400:intron | 55.0% | |
| CACTAGGGTCGCAGTGAACA+GGG | + | chr3_3:57719229-57719248 | Msa0460400:intron | 55.0% | |
| ! | CGTGCTATAGCGGAATAGCG+TGG | + | chr3_3:57719327-57719346 | Msa0460400:intron | 55.0% |
| ! | ATAGCGGAATAGCGTGGCGA+AGG | + | chr3_3:57719333-57719352 | Msa0460400:intron | 55.0% |
| GCAGGAAAATGGCTTCGCAG+GGG | - | chr3_3:57719365-57719384 | None:intergenic | 55.0% | |
| ATAGTGGCCGCAAATAGCGG+TGG | + | chr3_3:57719409-57719428 | Msa0460400:intron | 55.0% | |
| TGAGGGTGGTAGCCGGAAAA+CGG | - | chr3_3:57719480-57719499 | None:intergenic | 55.0% | |
| CACAACATGAGGGTGGTAGC+CGG | - | chr3_3:57719487-57719506 | None:intergenic | 55.0% | |
| CCAAGTCTCACTGTCAGGGA+CGG | - | chr3_3:57720362-57720381 | None:intergenic | 55.0% | |
| CGTCCCTGACAGTGAGACTT+GGG | + | chr3_3:57720360-57720379 | Msa0460400:intron | 55.0% | |
| CTCTCCCAAGTCTCACTGTC+AGG | - | chr3_3:57720367-57720386 | None:intergenic | 55.0% | |
| GACGTTGTGTACAGGGGACT+TGG | - | chr3_3:57720412-57720431 | None:intergenic | 55.0% | |
| ACAGGCTTAAAGCGGCCATC+AGG | - | chr3_3:57720747-57720766 | None:intergenic | 55.0% | |
| ! | GCCGCTTTAAGCCTGTGAAC+TGG | + | chr3_3:57720751-57720770 | Msa0460400:CDS | 55.0% |
| CTGGCGTGAAGCCCTTTCTT+TGG | + | chr3_3:57720770-57720789 | Msa0460400:CDS | 55.0% | |
| ! | TTTCCTGTTGGTTGGCACCC+AGG | + | chr3_3:57721007-57721026 | Msa0460400:CDS | 55.0% |
| ATACCTGGGTGCCAACCAAC+AGG | - | chr3_3:57721013-57721032 | None:intergenic | 55.0% | |
| TCCAAATTTGCAGCCACGGG+TGG | + | chr3_3:57721308-57721327 | Msa0460400:intron | 55.0% | |
| TCCACCCGTGGCTGCAAATT+TGG | - | chr3_3:57721312-57721331 | None:intergenic | 55.0% | |
| TGTCACGGCAAACCAAGCCA+AGG | + | chr3_3:57721365-57721384 | Msa0460400:CDS | 55.0% | |
| ACGGCAAACCAAGCCAAGGT+CGG | + | chr3_3:57721369-57721388 | Msa0460400:CDS | 55.0% | |
| AGGCCCAATGTAACCGACCT+TGG | - | chr3_3:57721385-57721404 | None:intergenic | 55.0% | |
| AAGGTCAAGTGCAGCAGCCT+GGG | - | chr3_3:57721658-57721677 | None:intergenic | 55.0% | |
| CAGATTGGGGCACAAGTCCA+AGG | - | chr3_3:57721677-57721696 | None:intergenic | 55.0% | |
| TGGCCTGCAGTTCCAACAGT+TGG | + | chr3_3:57721903-57721922 | Msa0460400:CDS | 55.0% | |
| GAGCTCTGTCCGAGATAGCA+GGG | + | chr3_3:57721955-57721974 | Msa0460400:CDS | 55.0% | |
| AGCTCTGTCCGAGATAGCAG+GGG | + | chr3_3:57721956-57721975 | Msa0460400:CDS | 55.0% | |
| TTGGCGCTACAGTCCTCAGT+CGG | - | chr3_3:57722019-57722038 | None:intergenic | 55.0% | |
| AGCGCCAAACCTTGCGCAAA+TGG | + | chr3_3:57722031-57722050 | Msa0460400:CDS | 55.0% | |
| CTCTCTCGTCCATTTGCGCA+AGG | - | chr3_3:57722043-57722062 | None:intergenic | 55.0% | |
| ACCGCAATCCCGAATGGTGA+TGG | - | chr3_3:57722119-57722138 | None:intergenic | 55.0% | |
| AAGCAAGGTCTTGCTTGGCC+AGG | - | chr3_3:57722283-57722302 | None:intergenic | 55.0% | |
| GCCAAGCAAGACCTTGCTTG+CGG | + | chr3_3:57722284-57722303 | Msa0460400:three_prime_UTR | 55.0% | |
| TCCGCAAGCAAGGTCTTGCT+TGG | - | chr3_3:57722288-57722307 | None:intergenic | 55.0% | |
| TTGAACGGAGGAGGAGGAGG+CGG | - | chr3_3:57715662-57715681 | None:intergenic | 60.0% | |
| ! | GGGTTTGCGGAGTTCGGGTT+TGG | - | chr3_3:57715691-57715710 | None:intergenic | 60.0% |
| ! | GGTTCGGGTTTGCGGAGTTC+GGG | - | chr3_3:57715696-57715715 | None:intergenic | 60.0% |
| ! | GGGTTCGGGTTTGCGGAGTT+CGG | - | chr3_3:57715697-57715716 | None:intergenic | 60.0% |
| TGTACTCTAGCGCCAGCGAC+GGG | - | chr3_3:57715771-57715790 | None:intergenic | 60.0% | |
| GGCATGGCGCAAGAAGCAAC+AGG | - | chr3_3:57715984-57716003 | None:intergenic | 60.0% | |
| CTAACCAGGAAGAGCGGGCA+TGG | - | chr3_3:57716000-57716019 | None:intergenic | 60.0% | |
| ATGTCAGCTCAGGGCCAGCT+AGG | + | chr3_3:57717853-57717872 | Msa0460400:intron | 60.0% | |
| AGGGTCGCAGTGAACAGGGA+CGG | + | chr3_3:57719233-57719252 | Msa0460400:intron | 60.0% | |
| CGGGTTCACGTCCGCTTCTA+GGG | + | chr3_3:57719448-57719467 | Msa0460400:intron | 60.0% | |
| AACGGCAGGAGCCCTAGAAG+CGG | - | chr3_3:57719462-57719481 | None:intergenic | 60.0% | |
| !!! | CTAGGGCTCCTGCCGTTTTC+CGG | + | chr3_3:57719465-57719484 | Msa0460400:intron | 60.0% |
| CCGTCCCTGACAGTGAGACT+TGG | + | chr3_3:57720359-57720378 | Msa0460400:intron | 60.0% | |
| AGGGCTTCACGCCAGTTCAC+AGG | - | chr3_3:57720765-57720784 | None:intergenic | 60.0% | |
| ACCATAGCAGCTTCCACCCG+TGG | - | chr3_3:57721324-57721343 | None:intergenic | 60.0% | |
| CAAGGTCAAGTGCAGCAGCC+TGG | - | chr3_3:57721659-57721678 | None:intergenic | 60.0% | |
| CAGGCTGCTGCACTTGACCT+TGG | + | chr3_3:57721657-57721676 | Msa0460400:CDS | 60.0% | |
| CGAGCTCTGTCCGAGATAGC+AGG | + | chr3_3:57721954-57721973 | Msa0460400:CDS | 60.0% | |
| TGGCGCTACAGTCCTCAGTC+GGG | - | chr3_3:57722018-57722037 | None:intergenic | 60.0% | |
| TGGAGAGTGGGGTGAGAGGG+TGG | - | chr3_3:57715525-57715544 | None:intergenic | 65.0% | |
| TGAACGGAGGAGGAGGAGGC+GGG | - | chr3_3:57715661-57715680 | None:intergenic | 65.0% | |
| !! | TTCAGGTTGGGGCTGAGCGG+CGG | - | chr3_3:57715718-57715737 | None:intergenic | 65.0% |
| CGGGGAGTGAGATCGACGAG+AGG | - | chr3_3:57715744-57715763 | None:intergenic | 65.0% | |
| TAGCGCCAGCGACGGGTGTA+CGG | - | chr3_3:57715764-57715783 | None:intergenic | 65.0% | |
| GCGGAATAGCGTGGCGAAGG+AGG | + | chr3_3:57719336-57719355 | Msa0460400:intron | 65.0% | |
| GCGGGTTCACGTCCGCTTCT+AGG | + | chr3_3:57719447-57719466 | Msa0460400:intron | 65.0% | |
| GGTGGTAGCCGGAAAACGGC+AGG | - | chr3_3:57719476-57719495 | None:intergenic | 65.0% | |
| GCCACGGGTGGAAGCTGCTA+TGG | + | chr3_3:57721320-57721339 | Msa0460400:intron | 65.0% | |
| ! | GAGCGGCGGGTTCGGGTTTG+CGG | - | chr3_3:57715704-57715723 | None:intergenic | 70.0% |
| ! | TTGGGGCTGAGCGGCGGGTT+CGG | - | chr3_3:57715712-57715731 | None:intergenic | 70.0% |
| !! | TCAGGTTGGGGCTGAGCGGC+GGG | - | chr3_3:57715717-57715736 | None:intergenic | 70.0% |
| ACTCCCCGTACACCCGTCGC+TGG | + | chr3_3:57715756-57715775 | Msa0460400:CDS | 70.0% | |
| AGCGCCAGCGACGGGTGTAC+GGG | - | chr3_3:57715763-57715782 | None:intergenic | 70.0% | |
| TGCGCCATGCCCGCTCTTCC+TGG | + | chr3_3:57715993-57716012 | Msa0460400:CDS | 70.0% | |
| GTGCAGCAGCCTGGGCAGCA+TGG | - | chr3_3:57721650-57721669 | None:intergenic | 70.0% | |
| !! | GAGGAGGCGGGTGGTGGTGG+TGG | - | chr3_3:57715649-57715668 | None:intergenic | 75.0% |
| ! | GAGGAGGAGGCGGGTGGTGG+TGG | - | chr3_3:57715652-57715671 | None:intergenic | 75.0% |
| GAGGAGGAGGAGGCGGGTGG+TGG | - | chr3_3:57715655-57715674 | None:intergenic | 75.0% | |
| ACGGAGGAGGAGGAGGCGGG+TGG | - | chr3_3:57715658-57715677 | None:intergenic | 75.0% | |
| ! | TGGGGCTGAGCGGCGGGTTC+GGG | - | chr3_3:57715711-57715730 | None:intergenic | 75.0% |
| GCGCCAGCGACGGGTGTACG+GGG | - | chr3_3:57715762-57715781 | None:intergenic | 75.0% | |
| GGGGAGTTCGCGCCCGACTG+AGG | + | chr3_3:57722003-57722022 | Msa0460400:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 57715441 | 57722448 | 57715441 | ID=Msa0460400;Name=Msa0460400 |
| chr3_3 | mRNA | 57715441 | 57722448 | 57715441 | ID=Msa0460400-mRNA-1;Parent=Msa0460400;Name=Msa0460400-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.83|1|0.8|0.66|6|206|796 |
| chr3_3 | exon | 57715441 | 57716014 | 57715441 | ID=Msa0460400-mRNA-1:exon:11791;Parent=Msa0460400-mRNA-1 |
| chr3_3 | exon | 57717273 | 57717519 | 57717273 | ID=Msa0460400-mRNA-1:exon:11792;Parent=Msa0460400-mRNA-1 |
| chr3_3 | exon | 57718056 | 57718350 | 57718056 | ID=Msa0460400-mRNA-1:exon:11793;Parent=Msa0460400-mRNA-1 |
| chr3_3 | exon | 57720654 | 57721028 | 57720654 | ID=Msa0460400-mRNA-1:exon:11794;Parent=Msa0460400-mRNA-1 |
| chr3_3 | exon | 57721321 | 57722360 | 57721321 | ID=Msa0460400-mRNA-1:exon:11795;Parent=Msa0460400-mRNA-1 |
| chr3_3 | exon | 57722383 | 57722448 | 57722383 | ID=Msa0460400-mRNA-1:exon:11796;Parent=Msa0460400-mRNA-1 |
| chr3_3 | CDS | 57715441 | 57716014 | 57715441 | ID=Msa0460400-mRNA-1:cds;Parent=Msa0460400-mRNA-1 |
| chr3_3 | CDS | 57717273 | 57717519 | 57717273 | ID=Msa0460400-mRNA-1:cds;Parent=Msa0460400-mRNA-1 |
| chr3_3 | CDS | 57718056 | 57718350 | 57718056 | ID=Msa0460400-mRNA-1:cds;Parent=Msa0460400-mRNA-1 |
| chr3_3 | CDS | 57720654 | 57721028 | 57720654 | ID=Msa0460400-mRNA-1:cds;Parent=Msa0460400-mRNA-1 |
| chr3_3 | CDS | 57721321 | 57722220 | 57721321 | ID=Msa0460400-mRNA-1:cds;Parent=Msa0460400-mRNA-1 |
| chr3_3 | three_prime_UTR | 57722221 | 57722360 | 57722221 | ID=Msa0460400-mRNA-1:three_prime_utr;Parent=Msa0460400-mRNA-1 |
| chr3_3 | three_prime_UTR | 57722383 | 57722448 | 57722383 | ID=Msa0460400-mRNA-1:three_prime_utr;Parent=Msa0460400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
