Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362200 | XP_003625933.2 | 99.843 | 635 | 1 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362200 | sp|Q53RH0|ERS1_ORYSJ | 78.716 | 592 | 126 | 0 | 2 | 593 | 1 | 592 | 0.0 | 957 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362200 | G7KSQ0 | 99.843 | 635 | 1 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1310 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0099340 | Msa1362200 | 0.807692 | 4.463908e-50 | -8.615850e-47 |
| Msa0622220 | Msa1362200 | 0.991411 | 1.669230e-187 | -8.615850e-47 |
| Msa0748360 | Msa1362200 | 0.989509 | 1.995899e-178 | -8.615850e-47 |
| Msa1268230 | Msa1362200 | 0.832356 | 9.904356e-56 | -8.615850e-47 |
| Msa1304790 | Msa1362200 | 0.802741 | 4.857500e-49 | -8.615850e-47 |
| Msa1041720 | Msa1362200 | 0.808379 | 3.188666e-50 | -8.615850e-47 |
| Msa1082180 | Msa1362200 | 0.956957 | 8.614725e-115 | -8.615850e-47 |
| Msa1114680 | Msa1362200 | 0.825425 | 4.719758e-54 | -8.615850e-47 |
| Msa1165590 | Msa1362200 | 0.989968 | 1.850359e-180 | -8.615850e-47 |
| Msa1165630 | Msa1362200 | 0.994060 | 2.883344e-204 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362200 | MtrunA17_Chr7g0269631 | 99.843 | 635 | 1 | 0 | 1 | 635 | 1 | 635 | 0.0 | 1310 |
| Msa1362200 | MtrunA17_Chr4g0013831 | 73.194 | 623 | 167 | 0 | 1 | 623 | 1 | 623 | 0.0 | 942 |
| Msa1362200 | MtrunA17_Chr1g0186431 | 42.007 | 588 | 325 | 9 | 5 | 586 | 29 | 606 | 1.37e-140 | 427 |
| Msa1362200 | MtrunA17_Chr1g0168161 | 40.210 | 572 | 323 | 11 | 5 | 567 | 28 | 589 | 7.65e-128 | 394 |
| Msa1362200 | MtrunA17_Chr7g0274831 | 38.035 | 631 | 325 | 15 | 5 | 598 | 34 | 635 | 7.75e-122 | 379 |
| Msa1362200 | MtrunA17_Chr1g0190021 | 38.088 | 638 | 358 | 15 | 3 | 623 | 26 | 643 | 2.88e-120 | 375 |
| Msa1362200 | MtrunA17_Chr5g0405701 | 33.721 | 258 | 145 | 4 | 334 | 567 | 499 | 754 | 9.93e-36 | 144 |
| Msa1362200 | MtrunA17_Chr3g0136601 | 32.258 | 341 | 179 | 11 | 300 | 596 | 331 | 663 | 1.25e-33 | 137 |
| Msa1362200 | MtrunA17_Chr8g0371601 | 32.031 | 256 | 152 | 3 | 334 | 567 | 461 | 716 | 5.56e-33 | 135 |
| Msa1362200 | MtrunA17_Chr8g0377481 | 30.357 | 280 | 162 | 4 | 335 | 582 | 383 | 661 | 2.13e-32 | 134 |
| Msa1362200 | MtrunA17_Chr3g0122391 | 28.333 | 300 | 175 | 5 | 335 | 598 | 431 | 726 | 8.11e-32 | 132 |
| Msa1362200 | MtrunA17_Chr5g0447641 | 30.389 | 283 | 158 | 5 | 338 | 582 | 611 | 892 | 6.59e-29 | 123 |
| Msa1362200 | MtrunA17_Chr8g0392301 | 30.820 | 305 | 156 | 6 | 338 | 588 | 377 | 680 | 7.56e-29 | 122 |
| Msa1362200 | MtrunA17_Chr1g0150511 | 32.973 | 185 | 116 | 4 | 300 | 483 | 337 | 514 | 2.42e-20 | 95.9 |
| Msa1362200 | MtrunA17_Chr1g0150511 | 38.393 | 112 | 64 | 3 | 484 | 592 | 585 | 694 | 8.15e-12 | 68.6 |
| Msa1362200 | MtrunA17_Chr1g0194741 | 26.846 | 298 | 160 | 11 | 312 | 563 | 367 | 652 | 2.03e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362200 | AT2G40940.1 | 76.962 | 599 | 138 | 0 | 2 | 600 | 1 | 599 | 0.0 | 935 |
| Msa1362200 | AT1G66340.1 | 71.383 | 622 | 174 | 1 | 2 | 623 | 1 | 618 | 0.0 | 900 |
| Msa1362200 | AT3G23150.2 | 40.555 | 577 | 306 | 14 | 5 | 562 | 32 | 590 | 1.41e-120 | 371 |
| Msa1362200 | AT3G23150.1 | 40.722 | 582 | 308 | 14 | 5 | 567 | 32 | 595 | 7.96e-120 | 374 |
| Msa1362200 | AT3G04580.2 | 36.478 | 636 | 377 | 13 | 4 | 623 | 26 | 650 | 7.74e-114 | 358 |
| Msa1362200 | AT3G04580.1 | 36.478 | 636 | 377 | 13 | 4 | 623 | 26 | 650 | 7.74e-114 | 358 |
| Msa1362200 | AT1G04310.1 | 36.965 | 514 | 299 | 10 | 5 | 497 | 34 | 543 | 4.77e-92 | 298 |
| Msa1362200 | AT1G04310.2 | 36.965 | 514 | 299 | 10 | 5 | 497 | 34 | 543 | 4.77e-92 | 298 |
| Msa1362200 | AT5G10720.1 | 32.500 | 320 | 186 | 8 | 323 | 619 | 339 | 651 | 9.92e-38 | 150 |
| Msa1362200 | AT2G17820.1 | 32.246 | 276 | 161 | 5 | 314 | 567 | 472 | 743 | 4.04e-35 | 142 |
| Msa1362200 | AT1G27320.1 | 29.885 | 348 | 185 | 7 | 266 | 582 | 398 | 717 | 6.85e-35 | 142 |
| Msa1362200 | AT5G35750.1 | 30.405 | 296 | 165 | 7 | 335 | 593 | 578 | 869 | 5.64e-31 | 130 |
| Msa1362200 | AT2G01830.5 | 29.545 | 308 | 165 | 5 | 338 | 597 | 455 | 758 | 3.00e-30 | 127 |
| Msa1362200 | AT2G01830.1 | 29.545 | 308 | 165 | 5 | 338 | 597 | 443 | 746 | 3.52e-30 | 127 |
| Msa1362200 | AT2G01830.4 | 29.545 | 308 | 165 | 5 | 338 | 597 | 443 | 746 | 3.52e-30 | 127 |
| Msa1362200 | AT2G01830.6 | 29.545 | 308 | 165 | 5 | 338 | 597 | 443 | 746 | 3.52e-30 | 127 |
| Msa1362200 | AT2G01830.3 | 29.545 | 308 | 165 | 5 | 338 | 597 | 443 | 746 | 3.52e-30 | 127 |
| Msa1362200 | AT2G01830.2 | 29.545 | 308 | 165 | 5 | 338 | 597 | 466 | 769 | 3.58e-30 | 127 |
| Msa1362200 | AT2G47430.1 | 27.491 | 291 | 167 | 10 | 334 | 586 | 385 | 669 | 1.60e-16 | 84.3 |
| Msa1362200 | AT4G16250.1 | 23.577 | 246 | 161 | 8 | 326 | 567 | 914 | 1136 | 6.27e-11 | 66.2 |
Find 173 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTCACATGCTGCTATTT+TGG | 0.127774 | tig0017690:+329418 | Msa1362200:CDS |
| GATATAAAGATATGCAATTT+TGG | 0.178667 | tig0017690:-330883 | None:intergenic |
| GCTCAGGCCAATCATTAATT+TGG | 0.179813 | tig0017690:-328234 | None:intergenic |
| TTTGTGCAGGTTAAGGATTC+TGG | 0.190806 | tig0017690:+330367 | Msa1362200:intron |
| AATCAACCTTCATGGTGTTT+TGG | 0.215357 | tig0017690:+329748 | Msa1362200:CDS |
| CTGCTTTCTTTCCATATAGA+TGG | 0.223591 | tig0017690:+327591 | Msa1362200:CDS |
| GTGGAGTTGGGTAGGACTTT+AGG | 0.238818 | tig0017690:+327956 | Msa1362200:CDS |
| GATGGGTTCTTATGCAGTTT+GGG | 0.252158 | tig0017690:+327609 | Msa1362200:CDS |
| AGCATTGTCATCACTTCTTT+TGG | 0.253771 | tig0017690:+329589 | Msa1362200:CDS |
| CGCCAATCCTGTAAGGATTC+TGG | 0.273695 | tig0017690:-330057 | None:intergenic |
| TTGGACTAGCTATTTGTAAA+AGG | 0.274567 | tig0017690:+330482 | Msa1362200:CDS |
| CGTTAGTTCAACCATTGATT+TGG | 0.279070 | tig0017690:+331138 | Msa1362200:three_prime_UTR |
| GTGGATTGGATACCGGAAAA+AGG | 0.285030 | tig0017690:-326813 | None:intergenic |
| GCTCTTCCGCCTTGTTCTTA+AGG | 0.299367 | tig0017690:-327817 | None:intergenic |
| AGATGGGTTCTTATGCAGTT+TGG | 0.302430 | tig0017690:+327608 | Msa1362200:CDS |
| ACAAGGCGGAAGAGCTTGAT+AGG | 0.308682 | tig0017690:+327825 | Msa1362200:CDS |
| TGCAAAACCAGAATCCTTAC+AGG | 0.315260 | tig0017690:+330050 | Msa1362200:CDS |
| CAATGAAACTACAATATAAT+CGG | 0.315913 | tig0017690:-331191 | None:intergenic |
| TGCATAAGAACCCATCTATA+TGG | 0.316824 | tig0017690:-327602 | None:intergenic |
| AAGTCTCCGCCTAATCTATT+TGG | 0.318508 | tig0017690:+326765 | Msa1362200:five_prime_UTR |
| CAACATTCTCACATGTCTTC+CGG | 0.319637 | tig0017690:-327879 | None:intergenic |
| ATCTCATGGGTGGGCACATA+TGG | 0.329280 | tig0017690:+330646 | Msa1362200:CDS |
| TAATGATTGGCCTGAGCTTT+CGG | 0.339005 | tig0017690:+328240 | Msa1362200:CDS |
| CACCTGAAGTTGTTGCGGTT+CGG | 0.344532 | tig0017690:+328185 | Msa1362200:CDS |
| CAAATTTCCAAATTAATGAT+TGG | 0.349017 | tig0017690:+328227 | Msa1362200:CDS |
| TCTAGCAGTGGTTCAGGTCT+TGG | 0.350863 | tig0017690:+330463 | Msa1362200:CDS |
| TTCATTGAACCGAGTTAAAC+TGG | 0.353085 | tig0017690:+331207 | Msa1362200:three_prime_UTR |
| ATTGAAGAGTAGTAATGTTT+TGG | 0.359573 | tig0017690:+329655 | Msa1362200:CDS |
| CTGAAGACTTCATTGACAAT+AGG | 0.366052 | tig0017690:-328088 | None:intergenic |
| TGAACCACAATTGGTTCAAC+TGG | 0.370506 | tig0017690:+331231 | Msa1362200:three_prime_UTR |
| ATAGAAGACTTCAAGTATAA+AGG | 0.374332 | tig0017690:-326637 | None:intergenic |
| GAATGTTGACTCATGAAATT+AGG | 0.375510 | tig0017690:+327894 | Msa1362200:CDS |
| GAGAGCGAGGGTCACGATAA+AGG | 0.377013 | tig0017690:+330672 | Msa1362200:CDS |
| GCTGTTTGCAGCTATAGATT+AGG | 0.378023 | tig0017690:+330962 | Msa1362200:three_prime_UTR |
| ACCTGAAGTTGTTGCGGTTC+GGG | 0.378789 | tig0017690:+328186 | Msa1362200:CDS |
| TGTCGATGTTGTTGCAGATC+AGG | 0.380378 | tig0017690:+328339 | Msa1362200:CDS |
| GTTAGTTCAACCATTGATTT+GGG | 0.382348 | tig0017690:+331139 | Msa1362200:three_prime_UTR |
| CTCTCGCCGAGCTAAATCTA+AGG | 0.393829 | tig0017690:-329486 | None:intergenic |
| TAAACTGGTTGAACCACAAT+TGG | 0.408863 | tig0017690:+331222 | Msa1362200:three_prime_UTR |
| ATGGCATGAGTAGGTAGATC+AGG | 0.413426 | tig0017690:-329931 | None:intergenic |
| AGATTCAAACCACTTCTTGA+TGG | 0.415200 | tig0017690:-328004 | None:intergenic |
| GTTCGATCTAGCAGTGGTTC+AGG | 0.425531 | tig0017690:+330457 | Msa1362200:CDS |
| CTCCACTTCCACTATATGCT+TGG | 0.434484 | tig0017690:-330773 | None:intergenic |
| ATTCATTGCTTAATATAACT+TGG | 0.435679 | tig0017690:+331075 | Msa1362200:three_prime_UTR |
| AAATTAGGAGCACTCTTGAT+AGG | 0.435699 | tig0017690:+327909 | Msa1362200:CDS |
| GGGGCAAGAATTAAAGTAAT+GGG | 0.436802 | tig0017690:-329910 | None:intergenic |
| GAGTTGATCCCGGGCTCGCA+TGG | 0.439303 | tig0017690:-329447 | None:intergenic |
| TACTTGACAAGAAGTTCATC+TGG | 0.439756 | tig0017690:-327491 | None:intergenic |
| AGCTCGGCGAGAGGCTGAAA+TGG | 0.447274 | tig0017690:+329496 | Msa1362200:CDS |
| AATGAAACTACAATATAATC+GGG | 0.448185 | tig0017690:-331190 | None:intergenic |
| ATTGATTGATATTCATATGA+AGG | 0.448953 | tig0017690:-326735 | None:intergenic |
| GCTACATTTGTAGTCAAACT+TGG | 0.452125 | tig0017690:+330702 | Msa1362200:CDS |
| GGGTAGGACTTTAGGATTGG+AGG | 0.452722 | tig0017690:+327964 | Msa1362200:CDS |
| ACCCGAACCGCAACAACTTC+AGG | 0.453206 | tig0017690:-328187 | None:intergenic |
| GGCCAAGCATATAGTGGAAG+TGG | 0.455936 | tig0017690:+330771 | Msa1362200:CDS |
| ATTCAGATTTGTAAATCTCA+TGG | 0.457675 | tig0017690:+330632 | Msa1362200:intron |
| ATTCTTACTCAGGAAGAAAC+CGG | 0.461381 | tig0017690:+327860 | Msa1362200:CDS |
| CCAAAATAGCAGCATGTGAA+AGG | 0.461533 | tig0017690:-329418 | None:intergenic |
| TTGTTCCATGAGTTGATCCC+GGG | 0.464658 | tig0017690:-329456 | None:intergenic |
| AGCAGAGGCCAAGCATATAG+TGG | 0.467264 | tig0017690:+330765 | Msa1362200:CDS |
| AGAAGTTCATCTGGAGGATA+AGG | 0.468819 | tig0017690:-327482 | None:intergenic |
| TTGACAATAGGAAGGTTTGT+TGG | 0.470136 | tig0017690:-328076 | None:intergenic |
| AAAGACCACTCTTGTGGAGT+TGG | 0.471472 | tig0017690:+327943 | Msa1362200:CDS |
| AAATCAATGGTTGAACTAAC+GGG | 0.472002 | tig0017690:-331136 | None:intergenic |
| TGGTAGCCTTGAATTAGAAA+TGG | 0.472836 | tig0017690:+329721 | Msa1362200:CDS |
| GTAGTCAAACTTGGGATTTG+TGG | 0.473180 | tig0017690:+330711 | Msa1362200:CDS |
| TGCTTTCTTTCCATATAGAT+GGG | 0.474314 | tig0017690:+327592 | Msa1362200:CDS |
| TTTGTTCCATGAGTTGATCC+CGG | 0.480126 | tig0017690:-329457 | None:intergenic |
| AAGACCACTCTTGTGGAGTT+GGG | 0.480183 | tig0017690:+327944 | Msa1362200:CDS |
| CAAATCAATGGTTGAACTAA+CGG | 0.485230 | tig0017690:-331137 | None:intergenic |
| ACAAAATAAATGAGTTCGAC+AGG | 0.487975 | tig0017690:-327560 | None:intergenic |
| GTTGGGTAGGACTTTAGGAT+TGG | 0.493614 | tig0017690:+327961 | Msa1362200:CDS |
| TGGAGGAGTCCATGCGAGCC+CGG | 0.494071 | tig0017690:+329438 | Msa1362200:CDS |
| TGTGGTATACGCATAGCTCT+CGG | 0.503245 | tig0017690:-328115 | None:intergenic |
| TCAACCATTGATTTGGGAGT+CGG | 0.504463 | tig0017690:+331145 | Msa1362200:three_prime_UTR |
| TCTATCATAACCCTCTGCTC+TGG | 0.509698 | tig0017690:-329626 | None:intergenic |
| GAACCACTGCTAGATCGAAC+AGG | 0.510532 | tig0017690:-330454 | None:intergenic |
| GGAGGAGTCCATGCGAGCCC+GGG | 0.516805 | tig0017690:+329439 | Msa1362200:CDS |
| GTTATGTTTGTGTTGTGAGT+GGG | 0.520905 | tig0017690:-326664 | None:intergenic |
| GTTCTTAAGGAACAACTCAC+GGG | 0.520997 | tig0017690:-327804 | None:intergenic |
| AACCAGAATCCTTACAGGAT+TGG | 0.521860 | tig0017690:+330055 | Msa1362200:CDS |
| CGGAGTGCGCCAAATAGATT+AGG | 0.523903 | tig0017690:-326774 | None:intergenic |
| TTCAGATTTGTAAATCTCAT+GGG | 0.524035 | tig0017690:+330633 | Msa1362200:intron |
| TCTGCTTGCAGCTTGATGAT+CGG | 0.525516 | tig0017690:-330748 | None:intergenic |
| AGGAGGTCGCCAATCCTGTA+AGG | 0.525729 | tig0017690:-330064 | None:intergenic |
| TATAACTAGTTGATACGATA+GGG | 0.528891 | tig0017690:-331030 | None:intergenic |
| AAATGACCATCACTTGATGC+TGG | 0.529879 | tig0017690:-330096 | None:intergenic |
| GGAAGAGCTTGATAGGGAGA+TGG | 0.530026 | tig0017690:+327832 | Msa1362200:CDS |
| CTACATTTGTAGTCAAACTT+GGG | 0.530312 | tig0017690:+330703 | Msa1362200:CDS |
| GTGGTATACGCATAGCTCTC+GGG | 0.531017 | tig0017690:-328114 | None:intergenic |
| TGTTCTTAAGGAACAACTCA+CGG | 0.533686 | tig0017690:-327805 | None:intergenic |
| CTGAACTGACTCCAGAGCAG+AGG | 0.535510 | tig0017690:+329615 | Msa1362200:CDS |
| AAAACCAGTTGAACCAATTG+TGG | 0.536954 | tig0017690:-331235 | None:intergenic |
| GATGGGACTTATTCTTACTC+AGG | 0.538781 | tig0017690:+327850 | Msa1362200:CDS |
| CATGTGGGTGTGTTAGATGA+TGG | 0.539856 | tig0017690:+327436 | Msa1362200:exon |
| ATGGGTTCTTATGCAGTTTG+GGG | 0.539955 | tig0017690:+327610 | Msa1362200:CDS |
| TTAACTTATCATGTACAAGT+TGG | 0.540061 | tig0017690:+328043 | Msa1362200:CDS |
| ATCTTTATATCAATGTCGAC+TGG | 0.540215 | tig0017690:+330895 | Msa1362200:three_prime_UTR |
| GATCTGTCCCGACTGGAAGA+TGG | 0.542916 | tig0017690:+329701 | Msa1362200:CDS |
| TTACTCAATGATGACGACAT+AGG | 0.543430 | tig0017690:+330816 | Msa1362200:CDS |
| AGGGGCAAGAATTAAAGTAA+TGG | 0.544261 | tig0017690:-329911 | None:intergenic |
| ACTCTGAGACTGAGTAAACT+TGG | 0.544636 | tig0017690:-330428 | None:intergenic |
| TCATTTCTATATACGAGTCC+AGG | 0.548157 | tig0017690:+330113 | Msa1362200:CDS |
| GAAGAGCTTGATAGGGAGAT+GGG | 0.548570 | tig0017690:+327833 | Msa1362200:CDS |
| CAATGCTGTCAAATATACTA+AGG | 0.548729 | tig0017690:+329999 | Msa1362200:CDS |
| CATGGGTGGGCACATATGGA+TGG | 0.549664 | tig0017690:+330650 | Msa1362200:CDS |
| GCGAGCCCGGGATCAACTCA+TGG | 0.550447 | tig0017690:+329451 | Msa1362200:CDS |
| GTATAACTAGTTGATACGAT+AGG | 0.554353 | tig0017690:-331031 | None:intergenic |
| AAGGCTACCATCTTCCAGTC+GGG | 0.554665 | tig0017690:-329708 | None:intergenic |
| CAAAATAGCAGCATGTGAAA+GGG | 0.558668 | tig0017690:-329417 | None:intergenic |
| CACTTTCTAGCACTATCAGT+AGG | 0.560837 | tig0017690:-328295 | None:intergenic |
| CTTGATGCTGGATAAAACTC+AGG | 0.561674 | tig0017690:-330084 | None:intergenic |
| CAGGTTAAGGATTCTGGATG+TGG | 0.561926 | tig0017690:+330373 | Msa1362200:intron |
| GAGTCGGTTAGTTCATCAGT+TGG | 0.566578 | tig0017690:+331161 | Msa1362200:three_prime_UTR |
| CTTGCAGCTTGATGATCGGA+TGG | 0.567335 | tig0017690:-330744 | None:intergenic |
| CTAACCGACTCCCAAATCAA+TGG | 0.568057 | tig0017690:-331149 | None:intergenic |
| CAAGGCGGAAGAGCTTGATA+GGG | 0.569408 | tig0017690:+327826 | Msa1362200:CDS |
| CATCGACAAGCTCCAACTCA+TGG | 0.570916 | tig0017690:-328324 | None:intergenic |
| ATCTAACACACCCACATGAA+AGG | 0.572240 | tig0017690:-327431 | None:intergenic |
| TGGCATGAGTAGGTAGATCA+GGG | 0.573826 | tig0017690:-329930 | None:intergenic |
| AGATTTGTAAATCTCATGGG+TGG | 0.574861 | tig0017690:+330636 | Msa1362200:intron |
| ACGTTGCCTTAGATTTAGCT+CGG | 0.574999 | tig0017690:+329480 | Msa1362200:CDS |
| TGCTGTCAAATATACTAAGG+AGG | 0.577420 | tig0017690:+330002 | Msa1362200:CDS |
| GCTGTCAAATATACTAAGGA+GGG | 0.577474 | tig0017690:+330003 | Msa1362200:CDS |
| TATTCTAAAGACCACTCTTG+TGG | 0.580698 | tig0017690:+327937 | Msa1362200:CDS |
| GTAAACTTGGTAAAGAGATG+TGG | 0.583173 | tig0017690:-330415 | None:intergenic |
| CTACTGATAGTGCTAGAAAG+TGG | 0.585604 | tig0017690:+328296 | Msa1362200:CDS |
| GCTAGGATAAGACCTCTTGT+CGG | 0.586111 | tig0017690:+328151 | Msa1362200:CDS |
| TGTTCTAGATCTGTCCCGAC+TGG | 0.586169 | tig0017690:+329694 | Msa1362200:CDS |
| CACACACTTGTCCACTTGCT+AGG | 0.588144 | tig0017690:+328134 | Msa1362200:CDS |
| TTTCATGATTCATGACTGCA+AGG | 0.589191 | tig0017690:-329541 | None:intergenic |
| CCACTCTTGTGGAGTTGGGT+AGG | 0.594476 | tig0017690:+327948 | Msa1362200:CDS |
| GATTTGTAAATCTCATGGGT+GGG | 0.596709 | tig0017690:+330637 | Msa1362200:intron |
| ACTTTCTAGCACTATCAGTA+GGG | 0.597780 | tig0017690:-328294 | None:intergenic |
| AGACTTCATTGACAATAGGA+AGG | 0.597850 | tig0017690:-328084 | None:intergenic |
| GTAAGTGCTTAAATCTAGCA+AGG | 0.598885 | tig0017690:-330797 | None:intergenic |
| CAAGGCTACCATCTTCCAGT+CGG | 0.599285 | tig0017690:-329709 | None:intergenic |
| TGAACTGACTCCAGAGCAGA+GGG | 0.605152 | tig0017690:+329616 | Msa1362200:CDS |
| TGAGTTGTTCCTTAAGAACA+AGG | 0.610418 | tig0017690:+327808 | Msa1362200:CDS |
| GCACATATGGATGGAGAGCG+AGG | 0.610844 | tig0017690:+330659 | Msa1362200:CDS |
| GGCACATATCTTCCGACAAG+AGG | 0.613814 | tig0017690:-328163 | None:intergenic |
| AAGAGATGTGGAATATCTTG+TGG | 0.615014 | tig0017690:-330403 | None:intergenic |
| GTGGTTCAACCAGTTTAACT+CGG | 0.615420 | tig0017690:-331216 | None:intergenic |
| AGAGGTCTTATCCTAGCAAG+TGG | 0.615685 | tig0017690:-328145 | None:intergenic |
| TCATCACCGATGGCATGAGT+AGG | 0.616501 | tig0017690:-329940 | None:intergenic |
| TGTTATGTTTGTGTTGTGAG+TGG | 0.617981 | tig0017690:-326665 | None:intergenic |
| CTTAGATTTAGCTCGGCGAG+AGG | 0.619358 | tig0017690:+329487 | Msa1362200:CDS |
| AGCACACGACACTTTAGCGA+TGG | 0.621416 | tig0017690:-327717 | None:intergenic |
| AAAGTGGCGAGACCATGAGT+TGG | 0.625466 | tig0017690:+328312 | Msa1362200:CDS |
| AAATTTGACAAATGTAGAAG+CGG | 0.631499 | tig0017690:-328211 | None:intergenic |
| GATCATCAAGCTGCAAGCAG+AGG | 0.631663 | tig0017690:+330750 | Msa1362200:CDS |
| CAAGCATATAGTGGAAGTGG+AGG | 0.635632 | tig0017690:+330774 | Msa1362200:CDS |
| ATGCCATCGGTGATGAAAAG+CGG | 0.635694 | tig0017690:+329947 | Msa1362200:CDS |
| AAGGGAGGTAGATCAGGCGG+CGG | 0.636261 | tig0017690:-326794 | None:intergenic |
| TGTGCCACCTGAAGTTGTTG+CGG | 0.636371 | tig0017690:+328180 | Msa1362200:CDS |
| ATGAACAAGCATAAGTGCAG+TGG | 0.643228 | tig0017690:-327753 | None:intergenic |
| CCTACCCAACTCCACAAGAG+TGG | 0.646184 | tig0017690:-327948 | None:intergenic |
| GATCTACCTACTCATGCCAT+CGG | 0.647848 | tig0017690:+329934 | Msa1362200:CDS |
| CCTCTCCCAAAACACCATGA+AGG | 0.651300 | tig0017690:-329754 | None:intergenic |
| CACATATGGATGGAGAGCGA+GGG | 0.654671 | tig0017690:+330660 | Msa1362200:CDS |
| GGACCTGTTCGATCTAGCAG+TGG | 0.657911 | tig0017690:+330451 | Msa1362200:CDS |
| CGAACCGCAACAACTTCAGG+TGG | 0.664993 | tig0017690:-328184 | None:intergenic |
| CTGTGGATGCCATCAAGAAG+TGG | 0.665478 | tig0017690:+327995 | Msa1362200:CDS |
| AGTGCGCCAAATAGATTAGG+CGG | 0.682072 | tig0017690:-326771 | None:intergenic |
| TTGACAAGAAGTTCATCTGG+AGG | 0.684589 | tig0017690:-327488 | None:intergenic |
| GATGCTGGATAAAACTCAGG+AGG | 0.685050 | tig0017690:-330081 | None:intergenic |
| CTAGCAAGTGGACAAGTGTG+TGG | 0.685475 | tig0017690:-328133 | None:intergenic |
| AATGCTATAATTGCATGCAT+CGG | 0.690508 | tig0017690:-329572 | None:intergenic |
| GGCATGAGTAGGTAGATCAG+GGG | 0.696928 | tig0017690:-329929 | None:intergenic |
| ATGAAACTACAATATAATCG+GGG | 0.698950 | tig0017690:-331189 | None:intergenic |
| AAGTTTACTCAGTCTCAGAG+TGG | 0.708425 | tig0017690:+330430 | Msa1362200:CDS |
| GTTGTTCCTTAAGAACAAGG+CGG | 0.762407 | tig0017690:+327811 | Msa1362200:CDS |
| GATTGGAGGAATGTGCACTG+TGG | 0.783064 | tig0017690:+327978 | Msa1362200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGATTTCTTTTATTTTAT+TGG | + | tig0017690:328366-328385 | Msa1362200:intron | 10.0% |
| !! | AGTATATTAAATAGTAGTAT+TGG | - | tig0017690:327013-327032 | None:intergenic | 15.0% |
| !! | ATTGATTGATATTCATATGA+AGG | - | tig0017690:326738-326757 | None:intergenic | 20.0% |
| !! | AAAAATATATATAGAGAGAG+TGG | - | tig0017690:326835-326854 | None:intergenic | 20.0% |
| !!! | TAAATAGTAGTATTGGATAA+TGG | - | tig0017690:327006-327025 | None:intergenic | 20.0% |
| !! | CAAATTTCCAAATTAATGAT+TGG | + | tig0017690:328227-328246 | Msa1362200:CDS | 20.0% |
| !! | ATACGGAATAAAAAATATTC+AGG | - | tig0017690:328405-328424 | None:intergenic | 20.0% |
| !! | AATAGTTGAAAATTAGGAAA+TGG | + | tig0017690:328549-328568 | Msa1362200:intron | 20.0% |
| !! | GTATTAAATACAAATATCAC+AGG | - | tig0017690:328757-328776 | None:intergenic | 20.0% |
| !!! | AAAGTTTCAGGTATTTAATT+TGG | - | tig0017690:329140-329159 | None:intergenic | 20.0% |
| !!! | AAACTTTTCATTCAATTGTA+TGG | + | tig0017690:329153-329172 | Msa1362200:intron | 20.0% |
| !! | AATTTCAAACACAGTTAATA+TGG | - | tig0017690:329215-329234 | None:intergenic | 20.0% |
| !! | AATTCAATCACATTAACATA+TGG | - | tig0017690:330175-330194 | None:intergenic | 20.0% |
| !!! | GATATAAAGATATGCAATTT+TGG | - | tig0017690:330886-330905 | None:intergenic | 20.0% |
| !! | ATTCATTGCTTAATATAACT+TGG | + | tig0017690:331075-331094 | Msa1362200:three_prime_UTR | 20.0% |
| !!! | TTAGGCTATGTTTTTAAAAT+CGG | + | tig0017690:331107-331126 | Msa1362200:three_prime_UTR | 20.0% |
| !! | AATGAAACTACAATATAATC+GGG | - | tig0017690:331193-331212 | None:intergenic | 20.0% |
| !! | CAATGAAACTACAATATAAT+CGG | - | tig0017690:331194-331213 | None:intergenic | 20.0% |
| ! | ATAGAAGACTTCAAGTATAA+AGG | - | tig0017690:326640-326659 | None:intergenic | 25.0% |
| ! | AAGAAGAAGAAGAAGAAAAA+GGG | - | tig0017690:326701-326720 | None:intergenic | 25.0% |
| !!! | AGCTACTGTTTTTTCTTTTT+TGG | + | tig0017690:327189-327208 | Msa1362200:intron | 25.0% |
| !! | CAACTCATTTTATAAATCTG+TGG | + | tig0017690:327654-327673 | Msa1362200:CDS | 25.0% |
| ! | TTAACTTATCATGTACAAGT+TGG | + | tig0017690:328043-328062 | Msa1362200:CDS | 25.0% |
| ! | AAATTTGACAAATGTAGAAG+CGG | - | tig0017690:328214-328233 | None:intergenic | 25.0% |
| ! | AATAGAAAACAACGGAAATA+CGG | - | tig0017690:328422-328441 | None:intergenic | 25.0% |
| ! | AGAAAAGGAATAGAAAACAA+CGG | - | tig0017690:328430-328449 | None:intergenic | 25.0% |
| ! | GTTTAAGCAATCAAAAGAAA+AGG | - | tig0017690:328445-328464 | None:intergenic | 25.0% |
| ! | GCATAGAATAGTTGAAAATT+AGG | + | tig0017690:328543-328562 | Msa1362200:intron | 25.0% |
| ! | AAATAACTATAAAGCCCAAA+TGG | - | tig0017690:328589-328608 | None:intergenic | 25.0% |
| ! | CTTAAGTAAAGAACCATATT+AGG | + | tig0017690:328650-328669 | Msa1362200:intron | 25.0% |
| ! | ACTAAATTTAAGAACGAGAT+TGG | + | tig0017690:328943-328962 | Msa1362200:intron | 25.0% |
| ! | AAATTTACAACAAATGTGTG+TGG | + | tig0017690:329055-329074 | Msa1362200:intron | 25.0% |
| ! | AATTTACAACAAATGTGTGT+GGG | + | tig0017690:329056-329075 | Msa1362200:intron | 25.0% |
| ! | GAATAAAACACTTAAAAGTC+AGG | - | tig0017690:329083-329102 | None:intergenic | 25.0% |
| !!! | GGTATTTAATTTGGTCTTTT+CGG | - | tig0017690:329131-329150 | None:intergenic | 25.0% |
| ! | ACAATTGAATGAAAAGTTTC+AGG | - | tig0017690:329152-329171 | None:intergenic | 25.0% |
| !! | ATTGAAGAGTAGTAATGTTT+TGG | + | tig0017690:329655-329674 | Msa1362200:CDS | 25.0% |
| !!! | TTTTTGCCATTTCTAATTCA+AGG | - | tig0017690:329730-329749 | None:intergenic | 25.0% |
| ! | TGTTAATGTGATTGAATTCT+TGG | + | tig0017690:330177-330196 | Msa1362200:intron | 25.0% |
| ! | GTTAATGTGATTGAATTCTT+GGG | + | tig0017690:330178-330197 | Msa1362200:intron | 25.0% |
| ! | AAGTCGATAACATAATGAAA+AGG | - | tig0017690:330275-330294 | None:intergenic | 25.0% |
| ! | CAACTGTTAGAAATTAATCT+AGG | + | tig0017690:330305-330324 | Msa1362200:intron | 25.0% |
| ! | GTTAATATGCATTTCACATA+GGG | - | tig0017690:330557-330576 | None:intergenic | 25.0% |
| ! | TGTTAATATGCATTTCACAT+AGG | - | tig0017690:330558-330577 | None:intergenic | 25.0% |
| ! | ATTCAGATTTGTAAATCTCA+TGG | + | tig0017690:330632-330651 | Msa1362200:intron | 25.0% |
| ! | TTCAGATTTGTAAATCTCAT+GGG | + | tig0017690:330633-330652 | Msa1362200:intron | 25.0% |
| !! | TATAACTAGTTGATACGATA+GGG | - | tig0017690:331033-331052 | None:intergenic | 25.0% |
| ! | ATGAAACTACAATATAATCG+GGG | - | tig0017690:331192-331211 | None:intergenic | 25.0% |
| GAAGAAGAAGAAGAAGAAAA+AGG | - | tig0017690:326702-326721 | None:intergenic | 30.0% | |
| TATATATAGAGAGAGTGGAT+TGG | - | tig0017690:326830-326849 | None:intergenic | 30.0% | |
| CTAACATGAGCATTATTGAA+TGG | - | tig0017690:326874-326893 | None:intergenic | 30.0% | |
| ACATAAATAAACCCAATCTG+AGG | - | tig0017690:327233-327252 | None:intergenic | 30.0% | |
| !!! | GTTCTTGTTGATTTTGAACT+TGG | + | tig0017690:327288-327307 | Msa1362200:intron | 30.0% |
| ! | TTTTACAGATCCTTTCATGT+GGG | + | tig0017690:327421-327440 | Msa1362200:intron | 30.0% |
| ACAAAATAAATGAGTTCGAC+AGG | - | tig0017690:327563-327582 | None:intergenic | 30.0% | |
| TGCTTTCTTTCCATATAGAT+GGG | + | tig0017690:327592-327611 | Msa1362200:CDS | 30.0% | |
| !! | GAATGTTGACTCATGAAATT+AGG | + | tig0017690:327894-327913 | Msa1362200:CDS | 30.0% |
| GGCAAAAAGTTATGCAATTA+TGG | + | tig0017690:328261-328280 | Msa1362200:CDS | 30.0% | |
| !! | TAGTTATTTCTCAACCATCA+AGG | + | tig0017690:328600-328619 | Msa1362200:intron | 30.0% |
| GAAAAGAAAACGACATAAGA+TGG | - | tig0017690:328828-328847 | None:intergenic | 30.0% | |
| ! | AAATCAAAATTAGACTGGCT+CGG | - | tig0017690:328865-328884 | None:intergenic | 30.0% |
| !!! | AGCCAGTCTAATTTTGATTT+TGG | + | tig0017690:328865-328884 | Msa1362200:intron | 30.0% |
| ! | TTTTGGCCATTGAAGATATA+TGG | + | tig0017690:328882-328901 | Msa1362200:intron | 30.0% |
| TAAGAACGAGATTGGAAAAA+TGG | + | tig0017690:328951-328970 | Msa1362200:intron | 30.0% | |
| AAGAACGAGATTGGAAAAAT+GGG | + | tig0017690:328952-328971 | Msa1362200:intron | 30.0% | |
| !! | TAATTTGGTCTTTTCGGATT+AGG | - | tig0017690:329125-329144 | None:intergenic | 30.0% |
| ! | CATTCAATTGTATGGCTTTT+AGG | + | tig0017690:329161-329180 | Msa1362200:intron | 30.0% |
| ATATCAGCACTAGAAAATGT+TGG | - | tig0017690:329267-329286 | None:intergenic | 30.0% | |
| !!! | AACATTTTCTAGTGCTGATA+TGG | + | tig0017690:329266-329285 | Msa1362200:intron | 30.0% |
| ! | AACTAAATGGATTCAGCATA+CGG | - | tig0017690:329378-329397 | None:intergenic | 30.0% |
| ! | AATCCATTTAGTTTCCATAC+AGG | + | tig0017690:329385-329404 | Msa1362200:intron | 30.0% |
| AATGCTATAATTGCATGCAT+CGG | - | tig0017690:329575-329594 | None:intergenic | 30.0% | |
| CAATACATAAATGCTGTTCA+TGG | - | tig0017690:329828-329847 | None:intergenic | 30.0% | |
| ! | TGCTTTTCTATTGTTAATGC+AGG | + | tig0017690:329846-329865 | Msa1362200:intron | 30.0% |
| !!! | AGTTTTTTCACAGATGCTAT+AGG | - | tig0017690:329889-329908 | None:intergenic | 30.0% |
| CAATGCTGTCAAATATACTA+AGG | + | tig0017690:329999-330018 | Msa1362200:CDS | 30.0% | |
| GAAAAGGTAGAGATATCTTT+GGG | - | tig0017690:330259-330278 | None:intergenic | 30.0% | |
| TGAAAAGGTAGAGATATCTT+TGG | - | tig0017690:330260-330279 | None:intergenic | 30.0% | |
| !! | TTGGACTAGCTATTTGTAAA+AGG | + | tig0017690:330482-330501 | Msa1362200:CDS | 30.0% |
| ACTAGCTATTTGTAAAAGGT+AGG | + | tig0017690:330486-330505 | Msa1362200:intron | 30.0% | |
| CTAGCTATTTGTAAAAGGTA+GGG | + | tig0017690:330487-330506 | Msa1362200:intron | 30.0% | |
| CATTTCACATAGGGTAATAA+TGG | - | tig0017690:330548-330567 | None:intergenic | 30.0% | |
| CTACATTTGTAGTCAAACTT+GGG | + | tig0017690:330703-330722 | Msa1362200:CDS | 30.0% | |
| !!! | AGATATGCAATTTTGGTGTT+TGG | - | tig0017690:330879-330898 | None:intergenic | 30.0% |
| ATCTTTATATCAATGTCGAC+TGG | + | tig0017690:330895-330914 | Msa1362200:three_prime_UTR | 30.0% | |
| ! | GTATAACTAGTTGATACGAT+AGG | - | tig0017690:331034-331053 | None:intergenic | 30.0% |
| ! | ATAACTTGGAGCAGTATTTT+AGG | + | tig0017690:331089-331108 | Msa1362200:three_prime_UTR | 30.0% |
| AAATCAATGGTTGAACTAAC+GGG | - | tig0017690:331139-331158 | None:intergenic | 30.0% | |
| CAAATCAATGGTTGAACTAA+CGG | - | tig0017690:331140-331159 | None:intergenic | 30.0% | |
| !! | GTTAGTTCAACCATTGATTT+GGG | + | tig0017690:331139-331158 | Msa1362200:three_prime_UTR | 30.0% |
| GTTATGTTTGTGTTGTGAGT+GGG | - | tig0017690:326667-326686 | None:intergenic | 35.0% | |
| TGTTATGTTTGTGTTGTGAG+TGG | - | tig0017690:326668-326687 | None:intergenic | 35.0% | |
| CGTAAGATTCGAGTAATTGT+TGG | + | tig0017690:327080-327099 | Msa1362200:intron | 35.0% | |
| ! | ATATTTAGATTCGTGCTGCT+GGG | + | tig0017690:327117-327136 | Msa1362200:intron | 35.0% |
| TCAAACTCAATACCTCAGAT+TGG | + | tig0017690:327218-327237 | Msa1362200:intron | 35.0% | |
| CAAACTCAATACCTCAGATT+GGG | + | tig0017690:327219-327238 | Msa1362200:intron | 35.0% | |
| ACGGGTTCAAAAACAAAAAG+TGG | - | tig0017690:327378-327397 | None:intergenic | 35.0% | |
| ! | CTTTTACAGATCCTTTCATG+TGG | + | tig0017690:327420-327439 | Msa1362200:intron | 35.0% |
| TACTTGACAAGAAGTTCATC+TGG | - | tig0017690:327494-327513 | None:intergenic | 35.0% | |
| CTGCTTTCTTTCCATATAGA+TGG | + | tig0017690:327591-327610 | Msa1362200:CDS | 35.0% | |
| TGCATAAGAACCCATCTATA+TGG | - | tig0017690:327605-327624 | None:intergenic | 35.0% | |
| !! | GTTTTAACACTCAACAGATC+GGG | - | tig0017690:327785-327804 | None:intergenic | 35.0% |
| !! | GGTTTTAACACTCAACAGAT+CGG | - | tig0017690:327786-327805 | None:intergenic | 35.0% |
| TGTTCTTAAGGAACAACTCA+CGG | - | tig0017690:327808-327827 | None:intergenic | 35.0% | |
| TGAGTTGTTCCTTAAGAACA+AGG | + | tig0017690:327808-327827 | Msa1362200:CDS | 35.0% | |
| ATTCTTACTCAGGAAGAAAC+CGG | + | tig0017690:327860-327879 | Msa1362200:CDS | 35.0% | |
| !! | AAATTAGGAGCACTCTTGAT+AGG | + | tig0017690:327909-327928 | Msa1362200:CDS | 35.0% |
| ! | TATTCTAAAGACCACTCTTG+TGG | + | tig0017690:327937-327956 | Msa1362200:CDS | 35.0% |
| AGATTCAAACCACTTCTTGA+TGG | - | tig0017690:328007-328026 | None:intergenic | 35.0% | |
| TTGACAATAGGAAGGTTTGT+TGG | - | tig0017690:328079-328098 | None:intergenic | 35.0% | |
| AGACTTCATTGACAATAGGA+AGG | - | tig0017690:328087-328106 | None:intergenic | 35.0% | |
| CTGAAGACTTCATTGACAAT+AGG | - | tig0017690:328091-328110 | None:intergenic | 35.0% | |
| ! | ACTTTCTAGCACTATCAGTA+GGG | - | tig0017690:328297-328316 | None:intergenic | 35.0% |
| !! | CTATTGCTGTGAACTTGTTT+TGG | + | tig0017690:328512-328531 | Msa1362200:intron | 35.0% |
| !!! | TGTGAACTTGTTTTGGAGTT+TGG | + | tig0017690:328519-328538 | Msa1362200:intron | 35.0% |
| AGGAAATGGCTATCAATCAT+TGG | + | tig0017690:328563-328582 | Msa1362200:intron | 35.0% | |
| CTATCAATCATTGGCCATTT+GGG | + | tig0017690:328572-328591 | Msa1362200:intron | 35.0% | |
| TATTCTGTCTTCTACCTTGA+TGG | - | tig0017690:328617-328636 | None:intergenic | 35.0% | |
| GGTTCTTTACTTAAGTCACT+AGG | - | tig0017690:328645-328664 | None:intergenic | 35.0% | |
| AACCATATTAGGTATGCATG+TGG | + | tig0017690:328661-328680 | Msa1362200:intron | 35.0% | |
| TCCCAATAAGTGGCTAAAAA+AGG | + | tig0017690:328706-328725 | Msa1362200:intron | 35.0% | |
| !!! | CCCTTTTTTAGCCACTTATT+GGG | - | tig0017690:328710-328729 | None:intergenic | 35.0% |
| CCCAATAAGTGGCTAAAAAA+GGG | + | tig0017690:328707-328726 | Msa1362200:intron | 35.0% | |
| !!! | TCCCTTTTTTAGCCACTTAT+TGG | - | tig0017690:328711-328730 | None:intergenic | 35.0% |
| AATAAGTGGCTAAAAAAGGG+AGG | + | tig0017690:328710-328729 | Msa1362200:intron | 35.0% | |
| ATAAGTGGCTAAAAAAGGGA+GGG | + | tig0017690:328711-328730 | Msa1362200:intron | 35.0% | |
| ATGTGTAAACTATATCGCAG+AGG | - | tig0017690:328800-328819 | None:intergenic | 35.0% | |
| TCTGCGATATAGTTTACACA+TGG | + | tig0017690:328799-328818 | Msa1362200:intron | 35.0% | |
| GGCCAAAATCAAAATTAGAC+TGG | - | tig0017690:328870-328889 | None:intergenic | 35.0% | |
| CTCAATATCAAGACTGAGAT+AGG | + | tig0017690:328908-328927 | Msa1362200:intron | 35.0% | |
| AGAACGAGATTGGAAAAATG+GGG | + | tig0017690:328953-328972 | Msa1362200:intron | 35.0% | |
| !! | ATGTTGGCGACATTTTGAAA+CGG | - | tig0017690:329251-329270 | None:intergenic | 35.0% |
| CTACCTGTATGGAAACTAAA+TGG | - | tig0017690:329391-329410 | None:intergenic | 35.0% | |
| CAAAATAGCAGCATGTGAAA+GGG | - | tig0017690:329420-329439 | None:intergenic | 35.0% | |
| TTTCATGATTCATGACTGCA+AGG | - | tig0017690:329544-329563 | None:intergenic | 35.0% | |
| ! | AGCATTGTCATCACTTCTTT+TGG | + | tig0017690:329589-329608 | Msa1362200:CDS | 35.0% |
| ! | TGGTAGCCTTGAATTAGAAA+TGG | + | tig0017690:329721-329740 | Msa1362200:CDS | 35.0% |
| ATGGCAAAAATCAACCTTCA+TGG | + | tig0017690:329740-329759 | Msa1362200:CDS | 35.0% | |
| ! | AATCAACCTTCATGGTGTTT+TGG | + | tig0017690:329748-329767 | Msa1362200:CDS | 35.0% |
| ! | ATCAACCTTCATGGTGTTTT+GGG | + | tig0017690:329749-329768 | Msa1362200:CDS | 35.0% |
| GGGGCAAGAATTAAAGTAAT+GGG | - | tig0017690:329913-329932 | None:intergenic | 35.0% | |
| AGGGGCAAGAATTAAAGTAA+TGG | - | tig0017690:329914-329933 | None:intergenic | 35.0% | |
| ! | CAGACACTTTTGAATGTTGT+GGG | + | tig0017690:329976-329995 | Msa1362200:CDS | 35.0% |
| TGCTGTCAAATATACTAAGG+AGG | + | tig0017690:330002-330021 | Msa1362200:CDS | 35.0% | |
| GCTGTCAAATATACTAAGGA+GGG | + | tig0017690:330003-330022 | Msa1362200:CDS | 35.0% | |
| ! | TTTTATCCAGCATCAAGTGA+TGG | + | tig0017690:330090-330109 | Msa1362200:CDS | 35.0% |
| TCATTTCTATATACGAGTCC+AGG | + | tig0017690:330113-330132 | Msa1362200:CDS | 35.0% | |
| TCATCCATACCTACATTTCT+AGG | + | tig0017690:330227-330246 | Msa1362200:intron | 35.0% | |
| CTTTCCTAGAAATGTAGGTA+TGG | - | tig0017690:330234-330253 | None:intergenic | 35.0% | |
| AAGAGATGTGGAATATCTTG+TGG | - | tig0017690:330406-330425 | None:intergenic | 35.0% | |
| GTAAACTTGGTAAAGAGATG+TGG | - | tig0017690:330418-330437 | None:intergenic | 35.0% | |
| AGATTTGTAAATCTCATGGG+TGG | + | tig0017690:330636-330655 | Msa1362200:intron | 35.0% | |
| GATTTGTAAATCTCATGGGT+GGG | + | tig0017690:330637-330656 | Msa1362200:intron | 35.0% | |
| GCTACATTTGTAGTCAAACT+TGG | + | tig0017690:330702-330721 | Msa1362200:CDS | 35.0% | |
| GTAAGTGCTTAAATCTAGCA+AGG | - | tig0017690:330800-330819 | None:intergenic | 35.0% | |
| ! | TTACTCAATGATGACGACAT+AGG | + | tig0017690:330816-330835 | Msa1362200:CDS | 35.0% |
| ! | CGTTAGTTCAACCATTGATT+TGG | + | tig0017690:331138-331157 | Msa1362200:three_prime_UTR | 35.0% |
| TTCATTGAACCGAGTTAAAC+TGG | + | tig0017690:331207-331226 | Msa1362200:three_prime_UTR | 35.0% | |
| TAAACTGGTTGAACCACAAT+TGG | + | tig0017690:331222-331241 | Msa1362200:three_prime_UTR | 35.0% | |
| AAAACCAGTTGAACCAATTG+TGG | - | tig0017690:331238-331257 | None:intergenic | 35.0% | |
| AAGTCTCCGCCTAATCTATT+TGG | + | tig0017690:326765-326784 | Msa1362200:five_prime_UTR | 40.0% | |
| ! | TGGATTGGATACCGGAAAAA+GGG | - | tig0017690:326815-326834 | None:intergenic | 40.0% |
| CATATTTAGATTCGTGCTGC+TGG | + | tig0017690:327116-327135 | Msa1362200:intron | 40.0% | |
| ATAGCATAGGTTGTCATCAC+GGG | - | tig0017690:327396-327415 | None:intergenic | 40.0% | |
| CATAGCATAGGTTGTCATCA+CGG | - | tig0017690:327397-327416 | None:intergenic | 40.0% | |
| !! | CTGTAAAAGCACCATAGCAT+AGG | - | tig0017690:327409-327428 | None:intergenic | 40.0% |
| ATCTAACACACCCACATGAA+AGG | - | tig0017690:327434-327453 | None:intergenic | 40.0% | |
| AGAAGTTCATCTGGAGGATA+AGG | - | tig0017690:327485-327504 | None:intergenic | 40.0% | |
| TTGACAAGAAGTTCATCTGG+AGG | - | tig0017690:327491-327510 | None:intergenic | 40.0% | |
| ! | AGATGGGTTCTTATGCAGTT+TGG | + | tig0017690:327608-327627 | Msa1362200:CDS | 40.0% |
| ! | GATGGGTTCTTATGCAGTTT+GGG | + | tig0017690:327609-327628 | Msa1362200:CDS | 40.0% |
| ATGGGTTCTTATGCAGTTTG+GGG | + | tig0017690:327610-327629 | Msa1362200:CDS | 40.0% | |
| ! | GGGGCTTTTATTGTTCTATG+TGG | + | tig0017690:327629-327648 | Msa1362200:CDS | 40.0% |
| ATGAACAAGCATAAGTGCAG+TGG | - | tig0017690:327756-327775 | None:intergenic | 40.0% | |
| GTTCTTAAGGAACAACTCAC+GGG | - | tig0017690:327807-327826 | None:intergenic | 40.0% | |
| GTTGTTCCTTAAGAACAAGG+CGG | + | tig0017690:327811-327830 | Msa1362200:CDS | 40.0% | |
| GATGGGACTTATTCTTACTC+AGG | + | tig0017690:327850-327869 | Msa1362200:CDS | 40.0% | |
| CAACATTCTCACATGTCTTC+CGG | - | tig0017690:327882-327901 | None:intergenic | 40.0% | |
| GCTCAGGCCAATCATTAATT+TGG | - | tig0017690:328237-328256 | None:intergenic | 40.0% | |
| !! | TAATGATTGGCCTGAGCTTT+CGG | + | tig0017690:328240-328259 | Msa1362200:CDS | 40.0% |
| ! | TAACTTTTTGCCGAAAGCTC+AGG | - | tig0017690:328253-328272 | None:intergenic | 40.0% |
| ! | CACTTTCTAGCACTATCAGT+AGG | - | tig0017690:328298-328317 | None:intergenic | 40.0% |
| ! | CTACTGATAGTGCTAGAAAG+TGG | + | tig0017690:328296-328315 | Msa1362200:CDS | 40.0% |
| AGACTCAGAACAGAACTTAC+AGG | - | tig0017690:328490-328509 | None:intergenic | 40.0% | |
| GCTATCAATCATTGGCCATT+TGG | + | tig0017690:328571-328590 | Msa1362200:intron | 40.0% | |
| CTCCACATGCATACCTAATA+TGG | - | tig0017690:328666-328685 | None:intergenic | 40.0% | |
| TGGCCATTGAAGATATATGG+TGG | + | tig0017690:328885-328904 | Msa1362200:intron | 40.0% | |
| GAGCCACCATATATCTTCAA+TGG | - | tig0017690:328891-328910 | None:intergenic | 40.0% | |
| TATCAAGACTGAGATAGGCT+CGG | + | tig0017690:328913-328932 | Msa1362200:intron | 40.0% | |
| AATCTGATGCAGATCTGTCT+AGG | + | tig0017690:329030-329049 | Msa1362200:intron | 40.0% | |
| !! | TTTGGTCTTTTCGGATTAGG+AGG | - | tig0017690:329122-329141 | None:intergenic | 40.0% |
| ! | TAAATGGATTCAGCATACGG+AGG | - | tig0017690:329375-329394 | None:intergenic | 40.0% |
| CCAAAATAGCAGCATGTGAA+AGG | - | tig0017690:329421-329440 | None:intergenic | 40.0% | |
| !! | CCTTTCACATGCTGCTATTT+TGG | + | tig0017690:329418-329437 | Msa1362200:CDS | 40.0% |
| !!! | TTCACATGCTGCTATTTTGG+AGG | + | tig0017690:329421-329440 | Msa1362200:CDS | 40.0% |
| !! | TTTGTTCCATGAGTTGATCC+CGG | - | tig0017690:329460-329479 | None:intergenic | 40.0% |
| ACGTTGCCTTAGATTTAGCT+CGG | + | tig0017690:329480-329499 | Msa1362200:CDS | 40.0% | |
| ! | GCAGACACTTTTGAATGTTG+TGG | + | tig0017690:329975-329994 | Msa1362200:CDS | 40.0% |
| TGCAAAACCAGAATCCTTAC+AGG | + | tig0017690:330050-330069 | Msa1362200:CDS | 40.0% | |
| AACCAGAATCCTTACAGGAT+TGG | + | tig0017690:330055-330074 | Msa1362200:CDS | 40.0% | |
| CTTGATGCTGGATAAAACTC+AGG | - | tig0017690:330087-330106 | None:intergenic | 40.0% | |
| AAATGACCATCACTTGATGC+TGG | - | tig0017690:330099-330118 | None:intergenic | 40.0% | |
| TGCACAAAGAAGGATGTTTG+GGG | - | tig0017690:330355-330374 | None:intergenic | 40.0% | |
| CTGCACAAAGAAGGATGTTT+GGG | - | tig0017690:330356-330375 | None:intergenic | 40.0% | |
| ATCCTTCTTTGTGCAGGTTA+AGG | + | tig0017690:330360-330379 | Msa1362200:intron | 40.0% | |
| ATCCTTAACCTGCACAAAGA+AGG | - | tig0017690:330365-330384 | None:intergenic | 40.0% | |
| TTTGTGCAGGTTAAGGATTC+TGG | + | tig0017690:330367-330386 | Msa1362200:intron | 40.0% | |
| !! | ACTCTGAGACTGAGTAAACT+TGG | - | tig0017690:330431-330450 | None:intergenic | 40.0% |
| AAGTTTACTCAGTCTCAGAG+TGG | + | tig0017690:330430-330449 | Msa1362200:CDS | 40.0% | |
| !! | GGTAATAATGGTGACTTGCT+AGG | - | tig0017690:330536-330555 | None:intergenic | 40.0% |
| GTAGTCAAACTTGGGATTTG+TGG | + | tig0017690:330711-330730 | Msa1362200:CDS | 40.0% | |
| GCTGTTTGCAGCTATAGATT+AGG | + | tig0017690:330962-330981 | Msa1362200:three_prime_UTR | 40.0% | |
| !! | TCAACCATTGATTTGGGAGT+CGG | + | tig0017690:331145-331164 | Msa1362200:three_prime_UTR | 40.0% |
| GTGGTTCAACCAGTTTAACT+CGG | - | tig0017690:331219-331238 | None:intergenic | 40.0% | |
| ! | TGAACCACAATTGGTTCAAC+TGG | + | tig0017690:331231-331250 | Msa1362200:three_prime_UTR | 40.0% |
| AGTGCGCCAAATAGATTAGG+CGG | - | tig0017690:326774-326793 | None:intergenic | 45.0% | |
| AAAAAGGGAGGTAGATCAGG+CGG | - | tig0017690:326800-326819 | None:intergenic | 45.0% | |
| ! | CTGATCTACCTCCCTTTTTC+CGG | + | tig0017690:326801-326820 | Msa1362200:five_prime_UTR | 45.0% |
| ATTGGATACCGGAAAAAGGG+AGG | - | tig0017690:326812-326831 | None:intergenic | 45.0% | |
| !! | GTGGATTGGATACCGGAAAA+AGG | - | tig0017690:326816-326835 | None:intergenic | 45.0% |
| !! | AGAGAGAGTGGATTGGATAC+CGG | - | tig0017690:326823-326842 | None:intergenic | 45.0% |
| CGTGATGACAACCTATGCTA+TGG | + | tig0017690:327395-327414 | Msa1362200:intron | 45.0% | |
| CATGTGGGTGTGTTAGATGA+TGG | + | tig0017690:327436-327455 | Msa1362200:exon | 45.0% | |
| GAAGAGCTTGATAGGGAGAT+GGG | + | tig0017690:327833-327852 | Msa1362200:CDS | 45.0% | |
| AAAGACCACTCTTGTGGAGT+TGG | + | tig0017690:327943-327962 | Msa1362200:CDS | 45.0% | |
| AAGACCACTCTTGTGGAGTT+GGG | + | tig0017690:327944-327963 | Msa1362200:CDS | 45.0% | |
| !! | GTTGGGTAGGACTTTAGGAT+TGG | + | tig0017690:327961-327980 | Msa1362200:CDS | 45.0% |
| TGTGGTATACGCATAGCTCT+CGG | - | tig0017690:328118-328137 | None:intergenic | 45.0% | |
| ! | AGAGGTCTTATCCTAGCAAG+TGG | - | tig0017690:328148-328167 | None:intergenic | 45.0% |
| GCTAGGATAAGACCTCTTGT+CGG | + | tig0017690:328151-328170 | Msa1362200:CDS | 45.0% | |
| TGTCGATGTTGTTGCAGATC+AGG | + | tig0017690:328339-328358 | Msa1362200:CDS | 45.0% | |
| AGCCACTTATTGGGATTCAG+CGG | - | tig0017690:328701-328720 | None:intergenic | 45.0% | |
| ATCAAGACTGAGATAGGCTC+GGG | + | tig0017690:328914-328933 | Msa1362200:intron | 45.0% | |
| !! | TTGTTCCATGAGTTGATCCC+GGG | - | tig0017690:329459-329478 | None:intergenic | 45.0% |
| TCTATCATAACCCTCTGCTC+TGG | - | tig0017690:329629-329648 | None:intergenic | 45.0% | |
| TGGCATGAGTAGGTAGATCA+GGG | - | tig0017690:329933-329952 | None:intergenic | 45.0% | |
| ATGGCATGAGTAGGTAGATC+AGG | - | tig0017690:329934-329953 | None:intergenic | 45.0% | |
| GATCTACCTACTCATGCCAT+CGG | + | tig0017690:329934-329953 | Msa1362200:CDS | 45.0% | |
| ATGCCATCGGTGATGAAAAG+CGG | + | tig0017690:329947-329966 | Msa1362200:CDS | 45.0% | |
| GATGCTGGATAAAACTCAGG+AGG | - | tig0017690:330084-330103 | None:intergenic | 45.0% | |
| ACGAGTCCAGGTTATGACTT+TGG | + | tig0017690:330125-330144 | Msa1362200:intron | 45.0% | |
| GAGATGCCAAAGTCATAACC+TGG | - | tig0017690:330134-330153 | None:intergenic | 45.0% | |
| GGGCTCTTTCCTAGAAATGT+AGG | - | tig0017690:330239-330258 | None:intergenic | 45.0% | |
| CCTGCACAAAGAAGGATGTT+TGG | - | tig0017690:330357-330376 | None:intergenic | 45.0% | |
| CCAAACATCCTTCTTTGTGC+AGG | + | tig0017690:330354-330373 | Msa1362200:intron | 45.0% | |
| CAGGTTAAGGATTCTGGATG+TGG | + | tig0017690:330373-330392 | Msa1362200:intron | 45.0% | |
| ! | TCTGCTTGCAGCTTGATGAT+CGG | - | tig0017690:330751-330770 | None:intergenic | 45.0% |
| CTCCACTTCCACTATATGCT+TGG | - | tig0017690:330776-330795 | None:intergenic | 45.0% | |
| ! | CAAGCATATAGTGGAAGTGG+AGG | + | tig0017690:330774-330793 | Msa1362200:CDS | 45.0% |
| ! | CTAACCGACTCCCAAATCAA+TGG | - | tig0017690:331152-331171 | None:intergenic | 45.0% |
| ! | GAGTCGGTTAGTTCATCAGT+TGG | + | tig0017690:331161-331180 | Msa1362200:three_prime_UTR | 45.0% |
| !! | AAAAAAAAAAAAAATAGTAT+AGG | - | tig0017690:327052-327071 | None:intergenic | 5.0% |
| CGGAGTGCGCCAAATAGATT+AGG | - | tig0017690:326777-326796 | None:intergenic | 50.0% | |
| CGGAAAAAGGGAGGTAGATC+AGG | - | tig0017690:326803-326822 | None:intergenic | 50.0% | |
| AGCACACGACACTTTAGCGA+TGG | - | tig0017690:327720-327739 | None:intergenic | 50.0% | |
| ! | GCTCTTCCGCCTTGTTCTTA+AGG | - | tig0017690:327820-327839 | None:intergenic | 50.0% |
| ACAAGGCGGAAGAGCTTGAT+AGG | + | tig0017690:327825-327844 | Msa1362200:CDS | 50.0% | |
| CAAGGCGGAAGAGCTTGATA+GGG | + | tig0017690:327826-327845 | Msa1362200:CDS | 50.0% | |
| GGAAGAGCTTGATAGGGAGA+TGG | + | tig0017690:327832-327851 | Msa1362200:CDS | 50.0% | |
| GTGGAGTTGGGTAGGACTTT+AGG | + | tig0017690:327956-327975 | Msa1362200:CDS | 50.0% | |
| !! | GGGTAGGACTTTAGGATTGG+AGG | + | tig0017690:327964-327983 | Msa1362200:CDS | 50.0% |
| GATTGGAGGAATGTGCACTG+TGG | + | tig0017690:327978-327997 | Msa1362200:CDS | 50.0% | |
| CTGTGGATGCCATCAAGAAG+TGG | + | tig0017690:327995-328014 | Msa1362200:CDS | 50.0% | |
| GTGGTATACGCATAGCTCTC+GGG | - | tig0017690:328117-328136 | None:intergenic | 50.0% | |
| CTAGCAAGTGGACAAGTGTG+TGG | - | tig0017690:328136-328155 | None:intergenic | 50.0% | |
| CACACACTTGTCCACTTGCT+AGG | + | tig0017690:328134-328153 | Msa1362200:CDS | 50.0% | |
| GGCACATATCTTCCGACAAG+AGG | - | tig0017690:328166-328185 | None:intergenic | 50.0% | |
| TGTGCCACCTGAAGTTGTTG+CGG | + | tig0017690:328180-328199 | Msa1362200:CDS | 50.0% | |
| CACCTGAAGTTGTTGCGGTT+CGG | + | tig0017690:328185-328204 | Msa1362200:CDS | 50.0% | |
| ACCTGAAGTTGTTGCGGTTC+GGG | + | tig0017690:328186-328205 | Msa1362200:CDS | 50.0% | |
| AAAGTGGCGAGACCATGAGT+TGG | + | tig0017690:328312-328331 | Msa1362200:CDS | 50.0% | |
| CATCGACAAGCTCCAACTCA+TGG | - | tig0017690:328327-328346 | None:intergenic | 50.0% | |
| CTCACATGCACCTCAGATGT+GGG | + | tig0017690:329299-329318 | Msa1362200:intron | 50.0% | |
| TCACATGCACCTCAGATGTG+GGG | + | tig0017690:329300-329319 | Msa1362200:intron | 50.0% | |
| CAATCATGTCCCCACATCTG+AGG | - | tig0017690:329312-329331 | None:intergenic | 50.0% | |
| AAGGGCAACTGCTACCTGTA+TGG | - | tig0017690:329402-329421 | None:intergenic | 50.0% | |
| CTCTCGCCGAGCTAAATCTA+AGG | - | tig0017690:329489-329508 | None:intergenic | 50.0% | |
| ! | CTTAGATTTAGCTCGGCGAG+AGG | + | tig0017690:329487-329506 | Msa1362200:CDS | 50.0% |
| ! | TGAACTGACTCCAGAGCAGA+GGG | + | tig0017690:329616-329635 | Msa1362200:CDS | 50.0% |
| ! | TGTTCTAGATCTGTCCCGAC+TGG | + | tig0017690:329694-329713 | Msa1362200:CDS | 50.0% |
| AAGGCTACCATCTTCCAGTC+GGG | - | tig0017690:329711-329730 | None:intergenic | 50.0% | |
| CAAGGCTACCATCTTCCAGT+CGG | - | tig0017690:329712-329731 | None:intergenic | 50.0% | |
| CCTCTCCCAAAACACCATGA+AGG | - | tig0017690:329757-329776 | None:intergenic | 50.0% | |
| !!! | CCTTCATGGTGTTTTGGGAG+AGG | + | tig0017690:329754-329773 | Msa1362200:CDS | 50.0% |
| GGCATGAGTAGGTAGATCAG+GGG | - | tig0017690:329932-329951 | None:intergenic | 50.0% | |
| TCATCACCGATGGCATGAGT+AGG | - | tig0017690:329943-329962 | None:intergenic | 50.0% | |
| !!! | AAGCCGCTTTTCATCACCGA+TGG | - | tig0017690:329953-329972 | None:intergenic | 50.0% |
| CGCCAATCCTGTAAGGATTC+TGG | - | tig0017690:330060-330079 | None:intergenic | 50.0% | |
| ! | GTTTGGGGTCAGTCATGAGA+TGG | - | tig0017690:330340-330359 | None:intergenic | 50.0% |
| GAACCACTGCTAGATCGAAC+AGG | - | tig0017690:330457-330476 | None:intergenic | 50.0% | |
| GTTCGATCTAGCAGTGGTTC+AGG | + | tig0017690:330457-330476 | Msa1362200:CDS | 50.0% | |
| TCTAGCAGTGGTTCAGGTCT+TGG | + | tig0017690:330463-330482 | Msa1362200:CDS | 50.0% | |
| ATCTCATGGGTGGGCACATA+TGG | + | tig0017690:330646-330665 | Msa1362200:CDS | 50.0% | |
| CACATATGGATGGAGAGCGA+GGG | + | tig0017690:330660-330679 | Msa1362200:CDS | 50.0% | |
| ! | CTTGCAGCTTGATGATCGGA+TGG | - | tig0017690:330747-330766 | None:intergenic | 50.0% |
| GATCATCAAGCTGCAAGCAG+AGG | + | tig0017690:330750-330769 | Msa1362200:CDS | 50.0% | |
| AGCAGAGGCCAAGCATATAG+TGG | + | tig0017690:330765-330784 | Msa1362200:CDS | 50.0% | |
| ! | GGCCAAGCATATAGTGGAAG+TGG | + | tig0017690:330771-330790 | Msa1362200:CDS | 50.0% |
| CCTACCCAACTCCACAAGAG+TGG | - | tig0017690:327951-327970 | None:intergenic | 55.0% | |
| CCACTCTTGTGGAGTTGGGT+AGG | + | tig0017690:327948-327967 | Msa1362200:CDS | 55.0% | |
| CGAACCGCAACAACTTCAGG+TGG | - | tig0017690:328187-328206 | None:intergenic | 55.0% | |
| ACCCGAACCGCAACAACTTC+AGG | - | tig0017690:328190-328209 | None:intergenic | 55.0% | |
| TGCATGTGGAGTATGCGCTG+AGG | + | tig0017690:328675-328694 | Msa1362200:intron | 55.0% | |
| GGCCGCTGAATCCCAATAAG+TGG | + | tig0017690:328696-328715 | Msa1362200:intron | 55.0% | |
| GTGGCTAAAAAAGGGAGGGC+AGG | + | tig0017690:328715-328734 | Msa1362200:intron | 55.0% | |
| ! | AGGAGGCATGTGCAGGCAAA+GGG | - | tig0017690:329105-329124 | None:intergenic | 55.0% |
| ! | TAGGAGGCATGTGCAGGCAA+AGG | - | tig0017690:329106-329125 | None:intergenic | 55.0% |
| ! | TCGGATTAGGAGGCATGTGC+AGG | - | tig0017690:329112-329131 | None:intergenic | 55.0% |
| ! | CCACATCTGAGGTGCATGTG+AGG | - | tig0017690:329301-329320 | None:intergenic | 55.0% |
| CCTCACATGCACCTCAGATG+TGG | + | tig0017690:329298-329317 | Msa1362200:intron | 55.0% | |
| ! | CTGAACTGACTCCAGAGCAG+AGG | + | tig0017690:329615-329634 | Msa1362200:CDS | 55.0% |
| GATCTGTCCCGACTGGAAGA+TGG | + | tig0017690:329701-329720 | Msa1362200:CDS | 55.0% | |
| AGGAGGTCGCCAATCCTGTA+AGG | - | tig0017690:330067-330086 | None:intergenic | 55.0% | |
| GGACCTGTTCGATCTAGCAG+TGG | + | tig0017690:330451-330470 | Msa1362200:CDS | 55.0% | |
| CATGGGTGGGCACATATGGA+TGG | + | tig0017690:330650-330669 | Msa1362200:CDS | 55.0% | |
| GCACATATGGATGGAGAGCG+AGG | + | tig0017690:330659-330678 | Msa1362200:CDS | 55.0% | |
| GAGAGCGAGGGTCACGATAA+AGG | + | tig0017690:330672-330691 | Msa1362200:CDS | 55.0% | |
| AAGGGAGGTAGATCAGGCGG+CGG | - | tig0017690:326797-326816 | None:intergenic | 60.0% | |
| AGCTCGGCGAGAGGCTGAAA+TGG | + | tig0017690:329496-329515 | Msa1362200:CDS | 60.0% | |
| TGGAGGAGTCCATGCGAGCC+CGG | + | tig0017690:329438-329457 | Msa1362200:CDS | 65.0% | |
| ! | GAGTTGATCCCGGGCTCGCA+TGG | - | tig0017690:329450-329469 | None:intergenic | 65.0% |
| GCGAGCCCGGGATCAACTCA+TGG | + | tig0017690:329451-329470 | Msa1362200:CDS | 65.0% | |
| GGAGGAGTCCATGCGAGCCC+GGG | + | tig0017690:329439-329458 | Msa1362200:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017690 | gene | 326622 | 331293 | 326622 | ID=Msa1362200;Name=Msa1362200 |
| tig0017690 | mRNA | 326622 | 331293 | 326622 | ID=Msa1362200-mRNA-1;Parent=Msa1362200;Name=Msa1362200-mRNA-1;_AED=0.02;_eAED=0.02;_QI=224|1|1|1|0.8|0.66|6|421|635 |
| tig0017690 | exon | 326622 | 326822 | 326622 | ID=Msa1362200-mRNA-1:exon:12800;Parent=Msa1362200-mRNA-1 |
| tig0017690 | exon | 327429 | 328360 | 327429 | ID=Msa1362200-mRNA-1:exon:12801;Parent=Msa1362200-mRNA-1 |
| tig0017690 | exon | 329407 | 329775 | 329407 | ID=Msa1362200-mRNA-1:exon:12802;Parent=Msa1362200-mRNA-1 |
| tig0017690 | exon | 329868 | 330134 | 329868 | ID=Msa1362200-mRNA-1:exon:12803;Parent=Msa1362200-mRNA-1 |
| tig0017690 | exon | 330376 | 330503 | 330376 | ID=Msa1362200-mRNA-1:exon:12804;Parent=Msa1362200-mRNA-1 |
| tig0017690 | exon | 330638 | 331293 | 330638 | ID=Msa1362200-mRNA-1:exon:12805;Parent=Msa1362200-mRNA-1 |
| tig0017690 | five_prime_UTR | 326622 | 326822 | 326622 | ID=Msa1362200-mRNA-1:five_prime_utr;Parent=Msa1362200-mRNA-1 |
| tig0017690 | five_prime_UTR | 327429 | 327451 | 327429 | ID=Msa1362200-mRNA-1:five_prime_utr;Parent=Msa1362200-mRNA-1 |
| tig0017690 | CDS | 327452 | 328360 | 327452 | ID=Msa1362200-mRNA-1:cds;Parent=Msa1362200-mRNA-1 |
| tig0017690 | CDS | 329407 | 329775 | 329407 | ID=Msa1362200-mRNA-1:cds;Parent=Msa1362200-mRNA-1 |
| tig0017690 | CDS | 329868 | 330134 | 329868 | ID=Msa1362200-mRNA-1:cds;Parent=Msa1362200-mRNA-1 |
| tig0017690 | CDS | 330376 | 330503 | 330376 | ID=Msa1362200-mRNA-1:cds;Parent=Msa1362200-mRNA-1 |
| tig0017690 | CDS | 330638 | 330872 | 330638 | ID=Msa1362200-mRNA-1:cds;Parent=Msa1362200-mRNA-1 |
| tig0017690 | three_prime_UTR | 330873 | 331293 | 330873 | ID=Msa1362200-mRNA-1:three_prime_utr;Parent=Msa1362200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
