Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367360 | XP_003604024.1 | 95.785 | 261 | 10 | 1 | 35 | 294 | 1 | 261 | 4.80e-178 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367360 | sp|Q7XA67|MTN2_ARATH | 63.008 | 246 | 91 | 0 | 49 | 294 | 9 | 254 | 1.72e-122 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367360 | G7J8G7 | 95.785 | 261 | 10 | 1 | 35 | 294 | 1 | 261 | 2.29e-178 | 501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1365070 | Msa1367360 | 0.878015 | 3.950726e-69 | -8.615850e-47 |
| Msa1367360 | Msa1435750 | 0.823592 | 1.275098e-53 | -8.615850e-47 |
| Msa1367360 | Msa1443100 | 0.991374 | 2.601290e-187 | -8.615850e-47 |
| Msa0797120 | Msa1367360 | 0.806876 | 6.647796e-50 | -8.615850e-47 |
| Msa0199690 | Msa1367360 | 0.813114 | 3.014470e-51 | -8.615850e-47 |
| Msa0471590 | Msa1367360 | 0.812228 | 4.712653e-51 | -8.615850e-47 |
| Msa0524180 | Msa1367360 | 0.985544 | 6.747259e-164 | -8.615850e-47 |
| Msa0878980 | Msa1367360 | -0.802172 | 6.363935e-49 | -8.615850e-47 |
| Msa0933290 | Msa1367360 | 0.816804 | 4.578354e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367360 | MtrunA17_Chr3g0145451 | 95.785 | 261 | 10 | 1 | 35 | 294 | 1 | 261 | 0.0 | 501 |
| Msa1367360 | MtrunA17_Chr4g0018461 | 84.946 | 93 | 14 | 0 | 202 | 294 | 1 | 93 | 2.33e-49 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1367360 | AT4G34840.1 | 63.008 | 246 | 91 | 0 | 49 | 294 | 9 | 254 | 1.75e-123 | 353 |
| Msa1367360 | AT4G38800.1 | 61.217 | 263 | 102 | 0 | 32 | 294 | 5 | 267 | 8.72e-122 | 349 |
| Msa1367360 | AT4G34840.2 | 63.948 | 233 | 84 | 0 | 62 | 294 | 1 | 233 | 4.22e-118 | 339 |
| Msa1367360 | AT4G34840.4 | 66.502 | 203 | 68 | 0 | 92 | 294 | 2 | 204 | 1.07e-103 | 301 |
| Msa1367360 | AT4G34840.5 | 61.878 | 181 | 69 | 0 | 49 | 229 | 9 | 189 | 5.99e-88 | 261 |
| Msa1367360 | AT4G34840.3 | 61.878 | 181 | 69 | 0 | 49 | 229 | 9 | 189 | 5.99e-88 | 261 |
Find 63 sgRNAs with CRISPR-Local
Find 542 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAATTCCTACAAAATT+TGG | 0.166272 | tig0018513:+51791 | Msa1367360:CDS |
| CCTGGTAAAGATCCTTCTTT+TGG | 0.203643 | tig0018513:+48529 | Msa1367360:CDS |
| GTCTCAATTTGAACTTGATT+TGG | 0.264829 | tig0018513:+48506 | Msa1367360:CDS |
| ACATGAAACAATATTCGATT+TGG | 0.276638 | tig0018513:+48049 | Msa1367360:exon |
| CTGCTGGTGGCTTCAAGGCC+AGG | 0.284627 | tig0018513:+48641 | Msa1367360:CDS |
| AAAATTGGAAAGATGAAATT+AGG | 0.292361 | tig0018513:-51897 | None:intergenic |
| CGTACCCAAGGAACACCTTC+TGG | 0.300889 | tig0018513:-48463 | None:intergenic |
| TGGCACTGCTGGTGGCTTCA+AGG | 0.343540 | tig0018513:+48636 | Msa1367360:CDS |
| AAAAGAAACGAAACAGAGTT+TGG | 0.355174 | tig0018513:+48123 | Msa1367360:CDS |
| ATGAATGACACATACAATAT+TGG | 0.356948 | tig0018513:-52045 | None:intergenic |
| ATCATTAATGCTGGCACTGC+TGG | 0.358624 | tig0018513:+48625 | Msa1367360:CDS |
| GTTGTACACTACCAATTGAT+TGG | 0.362358 | tig0018513:+51941 | Msa1367360:three_prime_UTR |
| CTCACATATTTCCAATCAAT+TGG | 0.370222 | tig0018513:-51952 | None:intergenic |
| TGTAACAAGAGCAGAGGATA+TGG | 0.391669 | tig0018513:-48569 | None:intergenic |
| TTAAGTTCCTTTACAAGGTT+GGG | 0.394633 | tig0018513:-50024 | None:intergenic |
| TGCTGGTGGCTTCAAGGCCA+GGG | 0.397697 | tig0018513:+48642 | Msa1367360:CDS |
| CATGAAACAATATTCGATTT+GGG | 0.398491 | tig0018513:+48050 | Msa1367360:exon |
| AGCTCAAATTTATTGACAAC+AGG | 0.399480 | tig0018513:-48330 | None:intergenic |
| TGTAACTTCTGCACTTGATC+TGG | 0.402973 | tig0018513:+51818 | Msa1367360:CDS |
| ACTTGATCTGGCTGTCGAAC+AGG | 0.406655 | tig0018513:+51830 | Msa1367360:CDS |
| CCAGCATTAATGATCAAATC+AGG | 0.413935 | tig0018513:-48616 | None:intergenic |
| GACTATGACGATGTTGGAAA+TGG | 0.417905 | tig0018513:-48205 | None:intergenic |
| TCCAACATCGTCATAGTCAT+TGG | 0.422187 | tig0018513:+48210 | Msa1367360:CDS |
| TGATGCAACTGTCAAAGATA+TGG | 0.423834 | tig0018513:+51478 | Msa1367360:CDS |
| GTTCCTTGGGTACGTTATCA+TGG | 0.425081 | tig0018513:+48472 | Msa1367360:CDS |
| ATTAAGTTCCTTTACAAGGT+TGG | 0.433930 | tig0018513:-50025 | None:intergenic |
| GGATTTAGACTTACAGGAAT+GGG | 0.445539 | tig0018513:-48724 | None:intergenic |
| AACAGAGTTTGGACTGCAAA+TGG | 0.457734 | tig0018513:+48134 | Msa1367360:CDS |
| TACAAGGTTGGGTGTTTCAA+AGG | 0.482086 | tig0018513:-50013 | None:intergenic |
| CTAACGGAGAGTTAGGATCT+TGG | 0.490412 | tig0018513:-48356 | None:intergenic |
| TGTAAAGGAACTTAATCTAA+AGG | 0.497465 | tig0018513:+50032 | Msa1367360:CDS |
| GAATGGCGATATAAATTAAG+AGG | 0.498221 | tig0018513:-52089 | None:intergenic |
| TGTAGGAATTCTTCAGCAGT+TGG | 0.499721 | tig0018513:-51783 | None:intergenic |
| AATTTGAACTTGATTTGGCC+TGG | 0.507460 | tig0018513:+48511 | Msa1367360:CDS |
| TGAAACACCCAACCTTGTAA+AGG | 0.516673 | tig0018513:+50017 | Msa1367360:CDS |
| TTAGATTAAGTTCCTTTACA+AGG | 0.520921 | tig0018513:-50029 | None:intergenic |
| GTCACCAACAGTAGCTCCCC+TGG | 0.526826 | tig0018513:-48659 | None:intergenic |
| CCTGATTTGATCATTAATGC+TGG | 0.529062 | tig0018513:+48616 | Msa1367360:CDS |
| ATTAATGCTGGCACTGCTGG+TGG | 0.533938 | tig0018513:+48628 | Msa1367360:CDS |
| CAGGTGGCTAAATTGTCTAC+TGG | 0.538602 | tig0018513:+51407 | Msa1367360:intron |
| GCTGGTGGCTTCAAGGCCAG+GGG | 0.541743 | tig0018513:+48643 | Msa1367360:CDS |
| AGGATTTAGACTTACAGGAA+TGG | 0.544029 | tig0018513:-48725 | None:intergenic |
| CGTTATCATGGAAAATTCAA+AGG | 0.546606 | tig0018513:+48484 | Msa1367360:CDS |
| ACTATGACGATGTTGGAAAT+GGG | 0.546835 | tig0018513:-48204 | None:intergenic |
| AAATTGCAGGAACTTTAAGA+AGG | 0.556348 | tig0018513:-51722 | None:intergenic |
| CCAAAAGAAGGATCTTTACC+AGG | 0.561581 | tig0018513:-48529 | None:intergenic |
| ACCAATGACTATGACGATGT+TGG | 0.562519 | tig0018513:-48211 | None:intergenic |
| ACACTGTCAACCCCAAAAGA+AGG | 0.562843 | tig0018513:-48541 | None:intergenic |
| TTTGCAGGAGTAGACGTGAA+TGG | 0.572420 | tig0018513:-52106 | None:intergenic |
| CCACAAGAGAGTGGTATGGT+TGG | 0.578175 | tig0018513:-52022 | None:intergenic |
| TCCAATATCAGCTATGCAGA+CGG | 0.581725 | tig0018513:+48299 | Msa1367360:intron |
| CTCTTTAGATATGACACCGC+AGG | 0.586462 | tig0018513:+51433 | Msa1367360:CDS |
| GCTGTGACTGATATTATTGA+CGG | 0.587769 | tig0018513:+51753 | Msa1367360:CDS |
| AAGGCCAGGGGAGCTACTGT+TGG | 0.594473 | tig0018513:+48655 | Msa1367360:CDS |
| AGCATATGTAACAAGAGCAG+AGG | 0.596717 | tig0018513:-48575 | None:intergenic |
| TTTCCATGATAACGTACCCA+AGG | 0.610898 | tig0018513:-48475 | None:intergenic |
| TTGGCCACAAGAGAGTGGTA+TGG | 0.634094 | tig0018513:-52026 | None:intergenic |
| GCAGGATGAATCATCAATCA+CGG | 0.637150 | tig0018513:+51451 | Msa1367360:CDS |
| CAATATTGGCCACAAGAGAG+TGG | 0.638924 | tig0018513:-52031 | None:intergenic |
| TGCAACTGTCAAAGATATGG+AGG | 0.640472 | tig0018513:+51481 | Msa1367360:CDS |
| CCAACCATACCACTCTCTTG+TGG | 0.644862 | tig0018513:+52022 | Msa1367360:three_prime_UTR |
| GTGATTGATGATTCATCCTG+CGG | 0.661402 | tig0018513:-51449 | None:intergenic |
| AATATCAGCTATGCAGACGG+AGG | 0.702961 | tig0018513:+48302 | Msa1367360:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATTAATAATTATAT+TGG | - | tig0018513:49079-49098 | None:intergenic | 0.0% |
| !! | ATTATTAATTAATAATTATT+TGG | + | tig0018513:49084-49103 | Msa1367360:intron | 0.0% |
| !! | TTATTAATTAATAATTATAT+TGG | - | tig0018513:49079-49098 | None:intergenic | 0.0% |
| !! | ATTATTAATTAATAATTATT+TGG | + | tig0018513:49084-49103 | Msa1367360:intron | 0.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | + | tig0018513:49093-49112 | Msa1367360:intron | 10.0% |
| !!! | TTTAATAATTATTTCTTACA+AGG | - | tig0018513:49409-49428 | None:intergenic | 10.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | + | tig0018513:49093-49112 | Msa1367360:intron | 10.0% |
| !!! | TTTAATAATTATTTCTTACA+AGG | - | tig0018513:49409-49428 | None:intergenic | 10.0% |
| !! | AAATCAAATAAAAAGACTAA+CGG | - | tig0018513:48375-48394 | None:intergenic | 15.0% |
| !! | AGTATTTAAATTAATGAATC+TGG | + | tig0018513:49028-49047 | Msa1367360:intron | 15.0% |
| !! | GTATTTAAATTAATGAATCT+GGG | + | tig0018513:49029-49048 | Msa1367360:intron | 15.0% |
| !! | TATAAAGAAAACTCTATTAT+AGG | + | tig0018513:50373-50392 | Msa1367360:intron | 15.0% |
| !!! | TGATTTTATCAAATTATTAC+CGG | + | tig0018513:51204-51223 | Msa1367360:intron | 15.0% |
| !! | TGAATAAAGTAATTAAGAAA+AGG | - | tig0018513:51350-51369 | None:intergenic | 15.0% |
| !! | AAATCAAATAAAAAGACTAA+CGG | - | tig0018513:48375-48394 | None:intergenic | 15.0% |
| !! | AGTATTTAAATTAATGAATC+TGG | + | tig0018513:49028-49047 | Msa1367360:intron | 15.0% |
| !! | GTATTTAAATTAATGAATCT+GGG | + | tig0018513:49029-49048 | Msa1367360:intron | 15.0% |
| !! | TATAAAGAAAACTCTATTAT+AGG | + | tig0018513:50373-50392 | Msa1367360:intron | 15.0% |
| !!! | TGATTTTATCAAATTATTAC+CGG | + | tig0018513:51204-51223 | Msa1367360:intron | 15.0% |
| !! | TGAATAAAGTAATTAAGAAA+AGG | - | tig0018513:51350-51369 | None:intergenic | 15.0% |
| !! | CAATTGAAATGAATTGAATT+AGG | - | tig0018513:48432-48451 | None:intergenic | 20.0% |
| !! | ATCCTACAAAATTCATATAT+AGG | + | tig0018513:48823-48842 | Msa1367360:intron | 20.0% |
| !!! | AACCTATATATGAATTTTGT+AGG | - | tig0018513:48828-48847 | None:intergenic | 20.0% |
| !!! | TTATTACATTTTTACGAAAC+CGG | + | tig0018513:49180-49199 | Msa1367360:intron | 20.0% |
| !!! | GTATTTCTAAACATTACATT+AGG | - | tig0018513:49790-49809 | None:intergenic | 20.0% |
| !!! | GAGCAAGAAATAATATATTT+TGG | - | tig0018513:50104-50123 | None:intergenic | 20.0% |
| !!! | ACTCTATTTTATTAACATGT+AGG | + | tig0018513:50869-50888 | Msa1367360:intron | 20.0% |
| !! | TTAACATGTAGGAAAATTTA+TGG | + | tig0018513:50880-50899 | Msa1367360:intron | 20.0% |
| !! | CAAAATAATAAGTAATCTCA+AGG | - | tig0018513:50961-50980 | None:intergenic | 20.0% |
| !!! | TTTGATTTGTGTTCTTTTTA+AGG | + | tig0018513:51012-51031 | Msa1367360:intron | 20.0% |
| !!! | AAACAAATCAAGATGTATTT+TGG | + | tig0018513:51304-51323 | Msa1367360:intron | 20.0% |
| !! | AAAGTAATTAAGAAAAGGAT+TGG | - | tig0018513:51345-51364 | None:intergenic | 20.0% |
| !! | AAAATTGGAAAGATGAAATT+AGG | - | tig0018513:51900-51919 | None:intergenic | 20.0% |
| !! | GTGTTGCATATAAAAAAAAT+TGG | - | tig0018513:51915-51934 | None:intergenic | 20.0% |
| !! | CAATTGAAATGAATTGAATT+AGG | - | tig0018513:48432-48451 | None:intergenic | 20.0% |
| !! | ATCCTACAAAATTCATATAT+AGG | + | tig0018513:48823-48842 | Msa1367360:intron | 20.0% |
| !!! | AACCTATATATGAATTTTGT+AGG | - | tig0018513:48828-48847 | None:intergenic | 20.0% |
| !!! | TTATTACATTTTTACGAAAC+CGG | + | tig0018513:49180-49199 | Msa1367360:intron | 20.0% |
| !!! | GTATTTCTAAACATTACATT+AGG | - | tig0018513:49790-49809 | None:intergenic | 20.0% |
| !!! | GAGCAAGAAATAATATATTT+TGG | - | tig0018513:50104-50123 | None:intergenic | 20.0% |
| !!! | ACTCTATTTTATTAACATGT+AGG | + | tig0018513:50869-50888 | Msa1367360:intron | 20.0% |
| !! | TTAACATGTAGGAAAATTTA+TGG | + | tig0018513:50880-50899 | Msa1367360:intron | 20.0% |
| !! | CAAAATAATAAGTAATCTCA+AGG | - | tig0018513:50961-50980 | None:intergenic | 20.0% |
| !!! | TTTGATTTGTGTTCTTTTTA+AGG | + | tig0018513:51012-51031 | Msa1367360:intron | 20.0% |
| !!! | AAACAAATCAAGATGTATTT+TGG | + | tig0018513:51304-51323 | Msa1367360:intron | 20.0% |
| !! | AAAGTAATTAAGAAAAGGAT+TGG | - | tig0018513:51345-51364 | None:intergenic | 20.0% |
| !! | AAAATTGGAAAGATGAAATT+AGG | - | tig0018513:51900-51919 | None:intergenic | 20.0% |
| !! | GTGTTGCATATAAAAAAAAT+TGG | - | tig0018513:51915-51934 | None:intergenic | 20.0% |
| ! | ACATGAAACAATATTCGATT+TGG | + | tig0018513:48049-48068 | Msa1367360:exon | 25.0% |
| ! | CATGAAACAATATTCGATTT+GGG | + | tig0018513:48050-48069 | Msa1367360:exon | 25.0% |
| ! | TATACTTTATCCTTCAGATT+GGG | + | tig0018513:48771-48790 | Msa1367360:intron | 25.0% |
| !!! | GAGGTTTTTAGTTGTTTTTA+AGG | - | tig0018513:48914-48933 | None:intergenic | 25.0% |
| !!! | ACAGCAAAAAAAGTGTTTTT+TGG | + | tig0018513:49139-49158 | Msa1367360:intron | 25.0% |
| !! | TATTACATTTTTACGAAACC+GGG | + | tig0018513:49181-49200 | Msa1367360:intron | 25.0% |
| ! | TAAGAAAAGTAAGACTAAAG+TGG | + | tig0018513:49488-49507 | Msa1367360:intron | 25.0% |
| ! | AAAAGGAAACAAAAAGAAGA+TGG | - | tig0018513:49583-49602 | None:intergenic | 25.0% |
| ! | AATACAGATGCAAGTTTAAA+AGG | - | tig0018513:49600-49619 | None:intergenic | 25.0% |
| ! | TTAAACTTGCATCTGTATTA+TGG | + | tig0018513:49601-49620 | Msa1367360:intron | 25.0% |
| ! | TGTAATGTTTAGAAATACGA+AGG | + | tig0018513:49792-49811 | Msa1367360:intron | 25.0% |
| !!! | ATTTCTTTTGTTTTCTGGTT+GGG | + | tig0018513:49858-49877 | Msa1367360:intron | 25.0% |
| !! | ATATAATTGTTGTCTTTTGC+AGG | + | tig0018513:49957-49976 | Msa1367360:intron | 25.0% |
| ! | TTAGATTAAGTTCCTTTACA+AGG | - | tig0018513:50032-50051 | None:intergenic | 25.0% |
| ! | TGTAAAGGAACTTAATCTAA+AGG | + | tig0018513:50032-50051 | Msa1367360:CDS | 25.0% |
| ! | CAAGACAATCATAAACAATA+GGG | - | tig0018513:50552-50571 | None:intergenic | 25.0% |
| ! | TTATATATGCATAGTGAACT+AGG | + | tig0018513:50626-50645 | Msa1367360:intron | 25.0% |
| ! | TATATATGCATAGTGAACTA+GGG | + | tig0018513:50627-50646 | Msa1367360:intron | 25.0% |
| ! | AACAAATTCAGCTATTAGAA+TGG | + | tig0018513:50730-50749 | Msa1367360:intron | 25.0% |
| ! | TCATTCTGAATTGAAACATA+TGG | + | tig0018513:51279-51298 | Msa1367360:intron | 25.0% |
| !! | GAACATTTGGTTGATTTATT+GGG | + | tig0018513:51543-51562 | Msa1367360:intron | 25.0% |
| !! | AACATTTGGTTGATTTATTG+GGG | + | tig0018513:51544-51563 | Msa1367360:intron | 25.0% |
| ! | TTAGAAGGTGATTTATTTGA+TGG | - | tig0018513:51611-51630 | None:intergenic | 25.0% |
| ! | TTAGGTCTCTATAATTTAGA+AGG | - | tig0018513:51626-51645 | None:intergenic | 25.0% |
| ! | TGAAGAATTCCTACAAAATT+TGG | + | tig0018513:51791-51810 | Msa1367360:CDS | 25.0% |
| !! | AGGTCATTAATTTTATCGAT+GGG | + | tig0018513:51850-51869 | Msa1367360:CDS | 25.0% |
| ! | ATGAATGACACATACAATAT+TGG | - | tig0018513:52048-52067 | None:intergenic | 25.0% |
| ! | ACATGAAACAATATTCGATT+TGG | + | tig0018513:48049-48068 | Msa1367360:exon | 25.0% |
| ! | CATGAAACAATATTCGATTT+GGG | + | tig0018513:48050-48069 | Msa1367360:exon | 25.0% |
| ! | TATACTTTATCCTTCAGATT+GGG | + | tig0018513:48771-48790 | Msa1367360:intron | 25.0% |
| !!! | GAGGTTTTTAGTTGTTTTTA+AGG | - | tig0018513:48914-48933 | None:intergenic | 25.0% |
| !!! | ACAGCAAAAAAAGTGTTTTT+TGG | + | tig0018513:49139-49158 | Msa1367360:intron | 25.0% |
| !! | TATTACATTTTTACGAAACC+GGG | + | tig0018513:49181-49200 | Msa1367360:intron | 25.0% |
| ! | TAAGAAAAGTAAGACTAAAG+TGG | + | tig0018513:49488-49507 | Msa1367360:intron | 25.0% |
| ! | AAAAGGAAACAAAAAGAAGA+TGG | - | tig0018513:49583-49602 | None:intergenic | 25.0% |
| ! | AATACAGATGCAAGTTTAAA+AGG | - | tig0018513:49600-49619 | None:intergenic | 25.0% |
| ! | TTAAACTTGCATCTGTATTA+TGG | + | tig0018513:49601-49620 | Msa1367360:intron | 25.0% |
| ! | TGTAATGTTTAGAAATACGA+AGG | + | tig0018513:49792-49811 | Msa1367360:intron | 25.0% |
| !!! | ATTTCTTTTGTTTTCTGGTT+GGG | + | tig0018513:49858-49877 | Msa1367360:intron | 25.0% |
| !! | ATATAATTGTTGTCTTTTGC+AGG | + | tig0018513:49957-49976 | Msa1367360:intron | 25.0% |
| ! | TTAGATTAAGTTCCTTTACA+AGG | - | tig0018513:50032-50051 | None:intergenic | 25.0% |
| ! | TGTAAAGGAACTTAATCTAA+AGG | + | tig0018513:50032-50051 | Msa1367360:CDS | 25.0% |
| ! | CAAGACAATCATAAACAATA+GGG | - | tig0018513:50552-50571 | None:intergenic | 25.0% |
| ! | TTATATATGCATAGTGAACT+AGG | + | tig0018513:50626-50645 | Msa1367360:intron | 25.0% |
| ! | TATATATGCATAGTGAACTA+GGG | + | tig0018513:50627-50646 | Msa1367360:intron | 25.0% |
| ! | AACAAATTCAGCTATTAGAA+TGG | + | tig0018513:50730-50749 | Msa1367360:intron | 25.0% |
| ! | TCATTCTGAATTGAAACATA+TGG | + | tig0018513:51279-51298 | Msa1367360:intron | 25.0% |
| !! | GAACATTTGGTTGATTTATT+GGG | + | tig0018513:51543-51562 | Msa1367360:intron | 25.0% |
| !! | AACATTTGGTTGATTTATTG+GGG | + | tig0018513:51544-51563 | Msa1367360:intron | 25.0% |
| ! | TTAGAAGGTGATTTATTTGA+TGG | - | tig0018513:51611-51630 | None:intergenic | 25.0% |
| ! | TTAGGTCTCTATAATTTAGA+AGG | - | tig0018513:51626-51645 | None:intergenic | 25.0% |
| ! | TGAAGAATTCCTACAAAATT+TGG | + | tig0018513:51791-51810 | Msa1367360:CDS | 25.0% |
| !! | AGGTCATTAATTTTATCGAT+GGG | + | tig0018513:51850-51869 | Msa1367360:CDS | 25.0% |
| ! | ATGAATGACACATACAATAT+TGG | - | tig0018513:52048-52067 | None:intergenic | 25.0% |
| ! | CGATTTGGGTACTAAAAAAA+AGG | + | tig0018513:48064-48083 | Msa1367360:CDS | 30.0% |
| GGGTACTAAAAAAAAGGAAA+AGG | + | tig0018513:48070-48089 | Msa1367360:CDS | 30.0% | |
| AAAAGAAACGAAACAGAGTT+TGG | + | tig0018513:48123-48142 | Msa1367360:CDS | 30.0% | |
| AGCTCAAATTTATTGACAAC+AGG | - | tig0018513:48333-48352 | None:intergenic | 30.0% | |
| CGTTATCATGGAAAATTCAA+AGG | + | tig0018513:48484-48503 | Msa1367360:CDS | 30.0% | |
| GTCTCAATTTGAACTTGATT+TGG | + | tig0018513:48506-48525 | Msa1367360:CDS | 30.0% | |
| GATAAAGGATTTAGACTTAC+AGG | - | tig0018513:48733-48752 | None:intergenic | 30.0% | |
| GTAAGTCTAAATCCTTTATC+TGG | + | tig0018513:48733-48752 | Msa1367360:intron | 30.0% | |
| CAAAAAGCAAAACCAGATAA+AGG | - | tig0018513:48748-48767 | None:intergenic | 30.0% | |
| CTATACTTTATCCTTCAGAT+TGG | + | tig0018513:48770-48789 | Msa1367360:intron | 30.0% | |
| !! | GTTGTTTTCTATGCATATGT+AGG | - | tig0018513:48851-48870 | None:intergenic | 30.0% |
| TCTTAAAATTCTGGGTTTGT+GGG | - | tig0018513:49219-49238 | None:intergenic | 30.0% | |
| TTCTTAAAATTCTGGGTTTG+TGG | - | tig0018513:49220-49239 | None:intergenic | 30.0% | |
| GATGGTCTTCTTAAAATTCT+GGG | - | tig0018513:49227-49246 | None:intergenic | 30.0% | |
| !! | CAGAATTTTAAGAAGACCAT+CGG | + | tig0018513:49226-49245 | Msa1367360:intron | 30.0% |
| AAAGTAACGCATGACATAAA+AGG | - | tig0018513:49518-49537 | None:intergenic | 30.0% | |
| !!! | ATAGCTCTAACTGTTTTTAC+TGG | + | tig0018513:49684-49703 | Msa1367360:intron | 30.0% |
| ATGTTTAGAAATACGAAGGT+TGG | + | tig0018513:49796-49815 | Msa1367360:intron | 30.0% | |
| TAGGCACTAAGAAACATTTA+GGG | - | tig0018513:49823-49842 | None:intergenic | 30.0% | |
| ATAGGCACTAAGAAACATTT+AGG | - | tig0018513:49824-49843 | None:intergenic | 30.0% | |
| AAAAGAAATGTAGCTGTGAT+AGG | - | tig0018513:49847-49866 | None:intergenic | 30.0% | |
| !!! | GCTACATTTCTTTTGTTTTC+TGG | + | tig0018513:49853-49872 | Msa1367360:intron | 30.0% |
| !!! | CATTTCTTTTGTTTTCTGGT+TGG | + | tig0018513:49857-49876 | Msa1367360:intron | 30.0% |
| !!! | TTTCTTTTGTTTTCTGGTTG+GGG | + | tig0018513:49859-49878 | Msa1367360:intron | 30.0% |
| TTAAGTTCCTTTACAAGGTT+GGG | - | tig0018513:50027-50046 | None:intergenic | 30.0% | |
| ATTAAGTTCCTTTACAAGGT+TGG | - | tig0018513:50028-50047 | None:intergenic | 30.0% | |
| TGTCTACAATAAACCTACAA+TGG | - | tig0018513:50259-50278 | None:intergenic | 30.0% | |
| CTTACATTTGCATTTGTGAA+AGG | + | tig0018513:50281-50300 | Msa1367360:intron | 30.0% | |
| ATATATGTGTGTTCATGTGA+AGG | - | tig0018513:50356-50375 | None:intergenic | 30.0% | |
| ! | ACATGTTTTGTCATCCAAAT+TGG | + | tig0018513:50441-50460 | Msa1367360:intron | 30.0% |
| GTAAACAATGGTATCCAATT+TGG | - | tig0018513:50458-50477 | None:intergenic | 30.0% | |
| GATATAATTCACGTTCTCAA+AGG | - | tig0018513:50530-50549 | None:intergenic | 30.0% | |
| CCAAGACAATCATAAACAAT+AGG | - | tig0018513:50553-50572 | None:intergenic | 30.0% | |
| CCTATTGTTTATGATTGTCT+TGG | + | tig0018513:50550-50569 | Msa1367360:intron | 30.0% | |
| ATATATGCATAGTGAACTAG+GGG | + | tig0018513:50628-50647 | Msa1367360:intron | 30.0% | |
| GAAGCAAGCATATAATAATG+TGG | + | tig0018513:50660-50679 | Msa1367360:intron | 30.0% | |
| ! | TTGCTAACTTATAGTGGAAT+GGG | - | tig0018513:50776-50795 | None:intergenic | 30.0% |
| ! | ATTGCTAACTTATAGTGGAA+TGG | - | tig0018513:50777-50796 | None:intergenic | 30.0% |
| TATGCATTGCTAACTTATAG+TGG | - | tig0018513:50782-50801 | None:intergenic | 30.0% | |
| CGATGTATATCATAATTGAG+TGG | + | tig0018513:50836-50855 | Msa1367360:intron | 30.0% | |
| !!! | TTTTGGCTGTTATTTTTGAC+AGG | + | tig0018513:50915-50934 | Msa1367360:intron | 30.0% |
| TAATAAGTAATCTCAAGGAG+AGG | - | tig0018513:50956-50975 | None:intergenic | 30.0% | |
| TTGAAAGTAACTACATATGC+CGG | - | tig0018513:51178-51197 | None:intergenic | 30.0% | |
| TATCAAATTATTACCGGTGT+CGG | + | tig0018513:51210-51229 | Msa1367360:intron | 30.0% | |
| GAATGAAACATTGACACAAA+CGG | - | tig0018513:51265-51284 | None:intergenic | 30.0% | |
| ! | GGAACATTTGGTTGATTTAT+TGG | + | tig0018513:51542-51561 | Msa1367360:intron | 30.0% |
| TCCTTTGTTAAATATTCCAC+AGG | + | tig0018513:51674-51693 | Msa1367360:intron | 30.0% | |
| CCTTTGTTAAATATTCCACA+GGG | + | tig0018513:51675-51694 | Msa1367360:intron | 30.0% | |
| ! | AAATTGCAGGAACTTTAAGA+AGG | - | tig0018513:51725-51744 | None:intergenic | 30.0% |
| ! | ACAGCTTTTACAAAAATTGC+AGG | - | tig0018513:51738-51757 | None:intergenic | 30.0% |
| ! | CAGGTCATTAATTTTATCGA+TGG | + | tig0018513:51849-51868 | Msa1367360:CDS | 30.0% |
| CTCACATATTTCCAATCAAT+TGG | - | tig0018513:51955-51974 | None:intergenic | 30.0% | |
| GAATGGCGATATAAATTAAG+AGG | - | tig0018513:52092-52111 | None:intergenic | 30.0% | |
| ! | CGATTTGGGTACTAAAAAAA+AGG | + | tig0018513:48064-48083 | Msa1367360:CDS | 30.0% |
| GGGTACTAAAAAAAAGGAAA+AGG | + | tig0018513:48070-48089 | Msa1367360:CDS | 30.0% | |
| AAAAGAAACGAAACAGAGTT+TGG | + | tig0018513:48123-48142 | Msa1367360:CDS | 30.0% | |
| AGCTCAAATTTATTGACAAC+AGG | - | tig0018513:48333-48352 | None:intergenic | 30.0% | |
| CGTTATCATGGAAAATTCAA+AGG | + | tig0018513:48484-48503 | Msa1367360:CDS | 30.0% | |
| GTCTCAATTTGAACTTGATT+TGG | + | tig0018513:48506-48525 | Msa1367360:CDS | 30.0% | |
| GATAAAGGATTTAGACTTAC+AGG | - | tig0018513:48733-48752 | None:intergenic | 30.0% | |
| GTAAGTCTAAATCCTTTATC+TGG | + | tig0018513:48733-48752 | Msa1367360:intron | 30.0% | |
| CAAAAAGCAAAACCAGATAA+AGG | - | tig0018513:48748-48767 | None:intergenic | 30.0% | |
| CTATACTTTATCCTTCAGAT+TGG | + | tig0018513:48770-48789 | Msa1367360:intron | 30.0% | |
| !! | GTTGTTTTCTATGCATATGT+AGG | - | tig0018513:48851-48870 | None:intergenic | 30.0% |
| TCTTAAAATTCTGGGTTTGT+GGG | - | tig0018513:49219-49238 | None:intergenic | 30.0% | |
| TTCTTAAAATTCTGGGTTTG+TGG | - | tig0018513:49220-49239 | None:intergenic | 30.0% | |
| GATGGTCTTCTTAAAATTCT+GGG | - | tig0018513:49227-49246 | None:intergenic | 30.0% | |
| !! | CAGAATTTTAAGAAGACCAT+CGG | + | tig0018513:49226-49245 | Msa1367360:intron | 30.0% |
| AAAGTAACGCATGACATAAA+AGG | - | tig0018513:49518-49537 | None:intergenic | 30.0% | |
| !!! | ATAGCTCTAACTGTTTTTAC+TGG | + | tig0018513:49684-49703 | Msa1367360:intron | 30.0% |
| ATGTTTAGAAATACGAAGGT+TGG | + | tig0018513:49796-49815 | Msa1367360:intron | 30.0% | |
| TAGGCACTAAGAAACATTTA+GGG | - | tig0018513:49823-49842 | None:intergenic | 30.0% | |
| ATAGGCACTAAGAAACATTT+AGG | - | tig0018513:49824-49843 | None:intergenic | 30.0% | |
| AAAAGAAATGTAGCTGTGAT+AGG | - | tig0018513:49847-49866 | None:intergenic | 30.0% | |
| !!! | GCTACATTTCTTTTGTTTTC+TGG | + | tig0018513:49853-49872 | Msa1367360:intron | 30.0% |
| !!! | CATTTCTTTTGTTTTCTGGT+TGG | + | tig0018513:49857-49876 | Msa1367360:intron | 30.0% |
| !!! | TTTCTTTTGTTTTCTGGTTG+GGG | + | tig0018513:49859-49878 | Msa1367360:intron | 30.0% |
| TTAAGTTCCTTTACAAGGTT+GGG | - | tig0018513:50027-50046 | None:intergenic | 30.0% | |
| ATTAAGTTCCTTTACAAGGT+TGG | - | tig0018513:50028-50047 | None:intergenic | 30.0% | |
| TGTCTACAATAAACCTACAA+TGG | - | tig0018513:50259-50278 | None:intergenic | 30.0% | |
| CTTACATTTGCATTTGTGAA+AGG | + | tig0018513:50281-50300 | Msa1367360:intron | 30.0% | |
| ATATATGTGTGTTCATGTGA+AGG | - | tig0018513:50356-50375 | None:intergenic | 30.0% | |
| ! | ACATGTTTTGTCATCCAAAT+TGG | + | tig0018513:50441-50460 | Msa1367360:intron | 30.0% |
| GTAAACAATGGTATCCAATT+TGG | - | tig0018513:50458-50477 | None:intergenic | 30.0% | |
| GATATAATTCACGTTCTCAA+AGG | - | tig0018513:50530-50549 | None:intergenic | 30.0% | |
| CCAAGACAATCATAAACAAT+AGG | - | tig0018513:50553-50572 | None:intergenic | 30.0% | |
| CCTATTGTTTATGATTGTCT+TGG | + | tig0018513:50550-50569 | Msa1367360:intron | 30.0% | |
| ATATATGCATAGTGAACTAG+GGG | + | tig0018513:50628-50647 | Msa1367360:intron | 30.0% | |
| GAAGCAAGCATATAATAATG+TGG | + | tig0018513:50660-50679 | Msa1367360:intron | 30.0% | |
| ! | TTGCTAACTTATAGTGGAAT+GGG | - | tig0018513:50776-50795 | None:intergenic | 30.0% |
| ! | ATTGCTAACTTATAGTGGAA+TGG | - | tig0018513:50777-50796 | None:intergenic | 30.0% |
| TATGCATTGCTAACTTATAG+TGG | - | tig0018513:50782-50801 | None:intergenic | 30.0% | |
| CGATGTATATCATAATTGAG+TGG | + | tig0018513:50836-50855 | Msa1367360:intron | 30.0% | |
| !!! | TTTTGGCTGTTATTTTTGAC+AGG | + | tig0018513:50915-50934 | Msa1367360:intron | 30.0% |
| TAATAAGTAATCTCAAGGAG+AGG | - | tig0018513:50956-50975 | None:intergenic | 30.0% | |
| TTGAAAGTAACTACATATGC+CGG | - | tig0018513:51178-51197 | None:intergenic | 30.0% | |
| TATCAAATTATTACCGGTGT+CGG | + | tig0018513:51210-51229 | Msa1367360:intron | 30.0% | |
| GAATGAAACATTGACACAAA+CGG | - | tig0018513:51265-51284 | None:intergenic | 30.0% | |
| ! | GGAACATTTGGTTGATTTAT+TGG | + | tig0018513:51542-51561 | Msa1367360:intron | 30.0% |
| TCCTTTGTTAAATATTCCAC+AGG | + | tig0018513:51674-51693 | Msa1367360:intron | 30.0% | |
| CCTTTGTTAAATATTCCACA+GGG | + | tig0018513:51675-51694 | Msa1367360:intron | 30.0% | |
| ! | AAATTGCAGGAACTTTAAGA+AGG | - | tig0018513:51725-51744 | None:intergenic | 30.0% |
| ! | ACAGCTTTTACAAAAATTGC+AGG | - | tig0018513:51738-51757 | None:intergenic | 30.0% |
| ! | CAGGTCATTAATTTTATCGA+TGG | + | tig0018513:51849-51868 | Msa1367360:CDS | 30.0% |
| CTCACATATTTCCAATCAAT+TGG | - | tig0018513:51955-51974 | None:intergenic | 30.0% | |
| GAATGGCGATATAAATTAAG+AGG | - | tig0018513:52092-52111 | None:intergenic | 30.0% | |
| !! | GTTGGAAATGGGTTTTTCAT+CGG | - | tig0018513:48196-48215 | None:intergenic | 35.0% |
| ACTATGACGATGTTGGAAAT+GGG | - | tig0018513:48207-48226 | None:intergenic | 35.0% | |
| AAAAAGACTAACGGAGAGTT+AGG | - | tig0018513:48366-48385 | None:intergenic | 35.0% | |
| !! | ATTGATTCCAGTTTTCCAGA+AGG | + | tig0018513:48448-48467 | Msa1367360:intron | 35.0% |
| !! | AATTTGAACTTGATTTGGCC+TGG | + | tig0018513:48511-48530 | Msa1367360:CDS | 35.0% |
| ! | CTGGTAAAGATCCTTCTTTT+GGG | + | tig0018513:48530-48549 | Msa1367360:CDS | 35.0% |
| ! | TGGTAAAGATCCTTCTTTTG+GGG | + | tig0018513:48531-48550 | Msa1367360:CDS | 35.0% |
| CCAGCATTAATGATCAAATC+AGG | - | tig0018513:48619-48638 | None:intergenic | 35.0% | |
| ! | CCTGATTTGATCATTAATGC+TGG | + | tig0018513:48616-48635 | Msa1367360:CDS | 35.0% |
| GGATTTAGACTTACAGGAAT+GGG | - | tig0018513:48727-48746 | None:intergenic | 35.0% | |
| AGGATTTAGACTTACAGGAA+TGG | - | tig0018513:48728-48747 | None:intergenic | 35.0% | |
| CGATGGTCTTCTTAAAATTC+TGG | - | tig0018513:49228-49247 | None:intergenic | 35.0% | |
| ATCCAGAATCAGAAATTGGT+GGG | - | tig0018513:49312-49331 | None:intergenic | 35.0% | |
| GTAGATCCAGAATCAGAAAT+TGG | - | tig0018513:49316-49335 | None:intergenic | 35.0% | |
| TAGTAGAAACACATGAGACT+AGG | - | tig0018513:49365-49384 | None:intergenic | 35.0% | |
| !! | TATGTCAAGTTGCGTTTTGA+AGG | + | tig0018513:49548-49567 | Msa1367360:intron | 35.0% |
| ! | ATTAGGAGAGTCTGTAGTTT+TGG | - | tig0018513:49773-49792 | None:intergenic | 35.0% |
| AGGCACTAAGAAACATTTAG+GGG | - | tig0018513:49822-49841 | None:intergenic | 35.0% | |
| AAATGTAGCTGTGATAGGAT+AGG | - | tig0018513:49842-49861 | None:intergenic | 35.0% | |
| !!! | TTCTTTTGTTTTCTGGTTGG+GGG | + | tig0018513:49860-49879 | Msa1367360:intron | 35.0% |
| ! | TTGCAGGTTTTTGATCTGTA+TGG | + | tig0018513:49973-49992 | Msa1367360:intron | 35.0% |
| ! | GTTTTTGATCTGTATGGAGT+TGG | + | tig0018513:49979-49998 | Msa1367360:CDS | 35.0% |
| ACATGTGATGTCAAGGAATT+TGG | - | tig0018513:50427-50446 | None:intergenic | 35.0% | |
| TGACAAAACATGTGATGTCA+AGG | - | tig0018513:50434-50453 | None:intergenic | 35.0% | |
| !! | TGATTGTCTTGGCTTTGATT+AGG | + | tig0018513:50561-50580 | Msa1367360:intron | 35.0% |
| ! | TAGCTGAATTTGTTCATGTC+AGG | - | tig0018513:50724-50743 | None:intergenic | 35.0% |
| CAGTTTAAACTATCCCAAGA+AGG | - | tig0018513:51048-51067 | None:intergenic | 35.0% | |
| TCTAACACACTGACACATAT+CGG | - | tig0018513:51142-51161 | None:intergenic | 35.0% | |
| TAATATATTGACACCGACAC+CGG | - | tig0018513:51226-51245 | None:intergenic | 35.0% | |
| ATACGTGCAAATATGGTTGA+AGG | - | tig0018513:51385-51404 | None:intergenic | 35.0% | |
| TGATGCAACTGTCAAAGATA+TGG | + | tig0018513:51478-51497 | Msa1367360:CDS | 35.0% | |
| CCCTGTGGAATATTTAACAA+AGG | - | tig0018513:51678-51697 | None:intergenic | 35.0% | |
| GCTGTGACTGATATTATTGA+CGG | + | tig0018513:51753-51772 | Msa1367360:CDS | 35.0% | |
| ! | TTACAGCAGCCAAATTTTGT+AGG | - | tig0018513:51803-51822 | None:intergenic | 35.0% |
| GTTGTACACTACCAATTGAT+TGG | + | tig0018513:51941-51960 | Msa1367360:three_prime_UTR | 35.0% | |
| !! | GTTGGAAATGGGTTTTTCAT+CGG | - | tig0018513:48196-48215 | None:intergenic | 35.0% |
| ACTATGACGATGTTGGAAAT+GGG | - | tig0018513:48207-48226 | None:intergenic | 35.0% | |
| AAAAAGACTAACGGAGAGTT+AGG | - | tig0018513:48366-48385 | None:intergenic | 35.0% | |
| !! | ATTGATTCCAGTTTTCCAGA+AGG | + | tig0018513:48448-48467 | Msa1367360:intron | 35.0% |
| !! | AATTTGAACTTGATTTGGCC+TGG | + | tig0018513:48511-48530 | Msa1367360:CDS | 35.0% |
| ! | CTGGTAAAGATCCTTCTTTT+GGG | + | tig0018513:48530-48549 | Msa1367360:CDS | 35.0% |
| ! | TGGTAAAGATCCTTCTTTTG+GGG | + | tig0018513:48531-48550 | Msa1367360:CDS | 35.0% |
| CCAGCATTAATGATCAAATC+AGG | - | tig0018513:48619-48638 | None:intergenic | 35.0% | |
| ! | CCTGATTTGATCATTAATGC+TGG | + | tig0018513:48616-48635 | Msa1367360:CDS | 35.0% |
| GGATTTAGACTTACAGGAAT+GGG | - | tig0018513:48727-48746 | None:intergenic | 35.0% | |
| AGGATTTAGACTTACAGGAA+TGG | - | tig0018513:48728-48747 | None:intergenic | 35.0% | |
| CGATGGTCTTCTTAAAATTC+TGG | - | tig0018513:49228-49247 | None:intergenic | 35.0% | |
| ATCCAGAATCAGAAATTGGT+GGG | - | tig0018513:49312-49331 | None:intergenic | 35.0% | |
| GTAGATCCAGAATCAGAAAT+TGG | - | tig0018513:49316-49335 | None:intergenic | 35.0% | |
| TAGTAGAAACACATGAGACT+AGG | - | tig0018513:49365-49384 | None:intergenic | 35.0% | |
| !! | TATGTCAAGTTGCGTTTTGA+AGG | + | tig0018513:49548-49567 | Msa1367360:intron | 35.0% |
| ! | ATTAGGAGAGTCTGTAGTTT+TGG | - | tig0018513:49773-49792 | None:intergenic | 35.0% |
| AGGCACTAAGAAACATTTAG+GGG | - | tig0018513:49822-49841 | None:intergenic | 35.0% | |
| AAATGTAGCTGTGATAGGAT+AGG | - | tig0018513:49842-49861 | None:intergenic | 35.0% | |
| !!! | TTCTTTTGTTTTCTGGTTGG+GGG | + | tig0018513:49860-49879 | Msa1367360:intron | 35.0% |
| ! | TTGCAGGTTTTTGATCTGTA+TGG | + | tig0018513:49973-49992 | Msa1367360:intron | 35.0% |
| ! | GTTTTTGATCTGTATGGAGT+TGG | + | tig0018513:49979-49998 | Msa1367360:CDS | 35.0% |
| ACATGTGATGTCAAGGAATT+TGG | - | tig0018513:50427-50446 | None:intergenic | 35.0% | |
| TGACAAAACATGTGATGTCA+AGG | - | tig0018513:50434-50453 | None:intergenic | 35.0% | |
| !! | TGATTGTCTTGGCTTTGATT+AGG | + | tig0018513:50561-50580 | Msa1367360:intron | 35.0% |
| ! | TAGCTGAATTTGTTCATGTC+AGG | - | tig0018513:50724-50743 | None:intergenic | 35.0% |
| CAGTTTAAACTATCCCAAGA+AGG | - | tig0018513:51048-51067 | None:intergenic | 35.0% | |
| TCTAACACACTGACACATAT+CGG | - | tig0018513:51142-51161 | None:intergenic | 35.0% | |
| TAATATATTGACACCGACAC+CGG | - | tig0018513:51226-51245 | None:intergenic | 35.0% | |
| ATACGTGCAAATATGGTTGA+AGG | - | tig0018513:51385-51404 | None:intergenic | 35.0% | |
| TGATGCAACTGTCAAAGATA+TGG | + | tig0018513:51478-51497 | Msa1367360:CDS | 35.0% | |
| CCCTGTGGAATATTTAACAA+AGG | - | tig0018513:51678-51697 | None:intergenic | 35.0% | |
| GCTGTGACTGATATTATTGA+CGG | + | tig0018513:51753-51772 | Msa1367360:CDS | 35.0% | |
| ! | TTACAGCAGCCAAATTTTGT+AGG | - | tig0018513:51803-51822 | None:intergenic | 35.0% |
| GTTGTACACTACCAATTGAT+TGG | + | tig0018513:51941-51960 | Msa1367360:three_prime_UTR | 35.0% | |
| AACAGAGTTTGGACTGCAAA+TGG | + | tig0018513:48134-48153 | Msa1367360:CDS | 40.0% | |
| GACTATGACGATGTTGGAAA+TGG | - | tig0018513:48208-48227 | None:intergenic | 40.0% | |
| TCCAACATCGTCATAGTCAT+TGG | + | tig0018513:48210-48229 | Msa1367360:CDS | 40.0% | |
| ACCAATGACTATGACGATGT+TGG | - | tig0018513:48214-48233 | None:intergenic | 40.0% | |
| TCTGCATAGCTGATATTGGA+GGG | - | tig0018513:48299-48318 | None:intergenic | 40.0% | |
| TCCAATATCAGCTATGCAGA+CGG | + | tig0018513:48299-48318 | Msa1367360:intron | 40.0% | |
| !!! | TTTTCCAGAAGGTGTTCCTT+GGG | + | tig0018513:48459-48478 | Msa1367360:CDS | 40.0% |
| ! | TTTCCATGATAACGTACCCA+AGG | - | tig0018513:48478-48497 | None:intergenic | 40.0% |
| CCAAAAGAAGGATCTTTACC+AGG | - | tig0018513:48532-48551 | None:intergenic | 40.0% | |
| ! | CCTGGTAAAGATCCTTCTTT+TGG | + | tig0018513:48529-48548 | Msa1367360:CDS | 40.0% |
| TGTAACAAGAGCAGAGGATA+TGG | - | tig0018513:48572-48591 | None:intergenic | 40.0% | |
| AGCATATGTAACAAGAGCAG+AGG | - | tig0018513:48578-48597 | None:intergenic | 40.0% | |
| TTATCCTTCAGATTGGGAAG+TGG | + | tig0018513:48777-48796 | Msa1367360:intron | 40.0% | |
| TATCCTTCAGATTGGGAAGT+GGG | + | tig0018513:48778-48797 | Msa1367360:intron | 40.0% | |
| AGGATCTAACAATCCGTGTT+AGG | - | tig0018513:48808-48827 | None:intergenic | 40.0% | |
| AAATTCTGGGTTTGTGGGTT+GGG | - | tig0018513:49214-49233 | None:intergenic | 40.0% | |
| AAAATTCTGGGTTTGTGGGT+TGG | - | tig0018513:49215-49234 | None:intergenic | 40.0% | |
| GATCCAGAATCAGAAATTGG+TGG | - | tig0018513:49313-49332 | None:intergenic | 40.0% | |
| TACAAGGTTGGGTGTTTCAA+AGG | - | tig0018513:50016-50035 | None:intergenic | 40.0% | |
| TGAAACACCCAACCTTGTAA+AGG | + | tig0018513:50017-50036 | Msa1367360:CDS | 40.0% | |
| AGGTTACATCACATGTTTGC+GGG | - | tig0018513:50313-50332 | None:intergenic | 40.0% | |
| GAGGTTACATCACATGTTTG+CGG | - | tig0018513:50314-50333 | None:intergenic | 40.0% | |
| GTAACCTCCAATTGTTACAC+AGG | + | tig0018513:50326-50345 | Msa1367360:intron | 40.0% | |
| TAAGCCTGTGTAACAATTGG+AGG | - | tig0018513:50333-50352 | None:intergenic | 40.0% | |
| AGGTAAGCCTGTGTAACAAT+TGG | - | tig0018513:50336-50355 | None:intergenic | 40.0% | |
| CAGTTCTTCTGGGTAAACAA+TGG | - | tig0018513:50470-50489 | None:intergenic | 40.0% | |
| CATTGTTTACCCAGAAGAAC+TGG | + | tig0018513:50468-50487 | Msa1367360:intron | 40.0% | |
| TCCTTCAATCCAGTTCTTCT+GGG | - | tig0018513:50480-50499 | None:intergenic | 40.0% | |
| !! | GAAAATTTATGGTGCCACCA+GGG | + | tig0018513:50891-50910 | Msa1367360:intron | 40.0% |
| !! | AAAATTTATGGTGCCACCAG+GGG | + | tig0018513:50892-50911 | Msa1367360:intron | 40.0% |
| AAAATAACAGCCAAAACCCC+TGG | - | tig0018513:50911-50930 | None:intergenic | 40.0% | |
| ! | AAACTATCCCAAGAAGGTAC+TGG | - | tig0018513:51042-51061 | None:intergenic | 40.0% |
| CCATATCCTGCACGTAAATT+GGG | - | tig0018513:51074-51093 | None:intergenic | 40.0% | |
| TCCATATCCTGCACGTAAAT+TGG | - | tig0018513:51075-51094 | None:intergenic | 40.0% | |
| GCACAGACGCATTAGATTAA+AGG | + | tig0018513:51106-51125 | Msa1367360:intron | 40.0% | |
| !! | CGCATTAGATTAAAGGTGTC+TGG | + | tig0018513:51113-51132 | Msa1367360:intron | 40.0% |
| ACCATATTTGCACGTATTCC+AGG | + | tig0018513:51388-51407 | Msa1367360:intron | 40.0% | |
| ACCTGGAATACGTGCAAATA+TGG | - | tig0018513:51392-51411 | None:intergenic | 40.0% | |
| ATATTTGCACGTATTCCAGG+TGG | + | tig0018513:51391-51410 | Msa1367360:intron | 40.0% | |
| ! | GTGATTGATGATTCATCCTG+CGG | - | tig0018513:51452-51471 | None:intergenic | 40.0% |
| GCAGGATGAATCATCAATCA+CGG | + | tig0018513:51451-51470 | Msa1367360:CDS | 40.0% | |
| TGCAACTGTCAAAGATATGG+AGG | + | tig0018513:51481-51500 | Msa1367360:CDS | 40.0% | |
| ! | ATATGGAGGTATGCAGTACA+TGG | + | tig0018513:51495-51514 | Msa1367360:intron | 40.0% |
| !!! | GTTTTCTAGAGCTTCGAAGT+TGG | + | tig0018513:51521-51540 | Msa1367360:intron | 40.0% |
| AGCTTCGAAGTTGGAACATT+TGG | + | tig0018513:51530-51549 | Msa1367360:intron | 40.0% | |
| CGAACAACTGTCAGTTACTT+AGG | - | tig0018513:51644-51663 | None:intergenic | 40.0% | |
| TGTAGGAATTCTTCAGCAGT+TGG | - | tig0018513:51786-51805 | None:intergenic | 40.0% | |
| TGTAACTTCTGCACTTGATC+TGG | + | tig0018513:51818-51837 | Msa1367360:CDS | 40.0% | |
| AACAGAGTTTGGACTGCAAA+TGG | + | tig0018513:48134-48153 | Msa1367360:CDS | 40.0% | |
| GACTATGACGATGTTGGAAA+TGG | - | tig0018513:48208-48227 | None:intergenic | 40.0% | |
| TCCAACATCGTCATAGTCAT+TGG | + | tig0018513:48210-48229 | Msa1367360:CDS | 40.0% | |
| ACCAATGACTATGACGATGT+TGG | - | tig0018513:48214-48233 | None:intergenic | 40.0% | |
| TCTGCATAGCTGATATTGGA+GGG | - | tig0018513:48299-48318 | None:intergenic | 40.0% | |
| TCCAATATCAGCTATGCAGA+CGG | + | tig0018513:48299-48318 | Msa1367360:intron | 40.0% | |
| !!! | TTTTCCAGAAGGTGTTCCTT+GGG | + | tig0018513:48459-48478 | Msa1367360:CDS | 40.0% |
| ! | TTTCCATGATAACGTACCCA+AGG | - | tig0018513:48478-48497 | None:intergenic | 40.0% |
| CCAAAAGAAGGATCTTTACC+AGG | - | tig0018513:48532-48551 | None:intergenic | 40.0% | |
| ! | CCTGGTAAAGATCCTTCTTT+TGG | + | tig0018513:48529-48548 | Msa1367360:CDS | 40.0% |
| TGTAACAAGAGCAGAGGATA+TGG | - | tig0018513:48572-48591 | None:intergenic | 40.0% | |
| AGCATATGTAACAAGAGCAG+AGG | - | tig0018513:48578-48597 | None:intergenic | 40.0% | |
| TTATCCTTCAGATTGGGAAG+TGG | + | tig0018513:48777-48796 | Msa1367360:intron | 40.0% | |
| TATCCTTCAGATTGGGAAGT+GGG | + | tig0018513:48778-48797 | Msa1367360:intron | 40.0% | |
| AGGATCTAACAATCCGTGTT+AGG | - | tig0018513:48808-48827 | None:intergenic | 40.0% | |
| AAATTCTGGGTTTGTGGGTT+GGG | - | tig0018513:49214-49233 | None:intergenic | 40.0% | |
| AAAATTCTGGGTTTGTGGGT+TGG | - | tig0018513:49215-49234 | None:intergenic | 40.0% | |
| GATCCAGAATCAGAAATTGG+TGG | - | tig0018513:49313-49332 | None:intergenic | 40.0% | |
| TACAAGGTTGGGTGTTTCAA+AGG | - | tig0018513:50016-50035 | None:intergenic | 40.0% | |
| TGAAACACCCAACCTTGTAA+AGG | + | tig0018513:50017-50036 | Msa1367360:CDS | 40.0% | |
| AGGTTACATCACATGTTTGC+GGG | - | tig0018513:50313-50332 | None:intergenic | 40.0% | |
| GAGGTTACATCACATGTTTG+CGG | - | tig0018513:50314-50333 | None:intergenic | 40.0% | |
| GTAACCTCCAATTGTTACAC+AGG | + | tig0018513:50326-50345 | Msa1367360:intron | 40.0% | |
| TAAGCCTGTGTAACAATTGG+AGG | - | tig0018513:50333-50352 | None:intergenic | 40.0% | |
| AGGTAAGCCTGTGTAACAAT+TGG | - | tig0018513:50336-50355 | None:intergenic | 40.0% | |
| CAGTTCTTCTGGGTAAACAA+TGG | - | tig0018513:50470-50489 | None:intergenic | 40.0% | |
| CATTGTTTACCCAGAAGAAC+TGG | + | tig0018513:50468-50487 | Msa1367360:intron | 40.0% | |
| TCCTTCAATCCAGTTCTTCT+GGG | - | tig0018513:50480-50499 | None:intergenic | 40.0% | |
| !! | GAAAATTTATGGTGCCACCA+GGG | + | tig0018513:50891-50910 | Msa1367360:intron | 40.0% |
| !! | AAAATTTATGGTGCCACCAG+GGG | + | tig0018513:50892-50911 | Msa1367360:intron | 40.0% |
| AAAATAACAGCCAAAACCCC+TGG | - | tig0018513:50911-50930 | None:intergenic | 40.0% | |
| ! | AAACTATCCCAAGAAGGTAC+TGG | - | tig0018513:51042-51061 | None:intergenic | 40.0% |
| CCATATCCTGCACGTAAATT+GGG | - | tig0018513:51074-51093 | None:intergenic | 40.0% | |
| TCCATATCCTGCACGTAAAT+TGG | - | tig0018513:51075-51094 | None:intergenic | 40.0% | |
| GCACAGACGCATTAGATTAA+AGG | + | tig0018513:51106-51125 | Msa1367360:intron | 40.0% | |
| !! | CGCATTAGATTAAAGGTGTC+TGG | + | tig0018513:51113-51132 | Msa1367360:intron | 40.0% |
| ACCATATTTGCACGTATTCC+AGG | + | tig0018513:51388-51407 | Msa1367360:intron | 40.0% | |
| ACCTGGAATACGTGCAAATA+TGG | - | tig0018513:51392-51411 | None:intergenic | 40.0% | |
| ATATTTGCACGTATTCCAGG+TGG | + | tig0018513:51391-51410 | Msa1367360:intron | 40.0% | |
| ! | GTGATTGATGATTCATCCTG+CGG | - | tig0018513:51452-51471 | None:intergenic | 40.0% |
| GCAGGATGAATCATCAATCA+CGG | + | tig0018513:51451-51470 | Msa1367360:CDS | 40.0% | |
| TGCAACTGTCAAAGATATGG+AGG | + | tig0018513:51481-51500 | Msa1367360:CDS | 40.0% | |
| ! | ATATGGAGGTATGCAGTACA+TGG | + | tig0018513:51495-51514 | Msa1367360:intron | 40.0% |
| !!! | GTTTTCTAGAGCTTCGAAGT+TGG | + | tig0018513:51521-51540 | Msa1367360:intron | 40.0% |
| AGCTTCGAAGTTGGAACATT+TGG | + | tig0018513:51530-51549 | Msa1367360:intron | 40.0% | |
| CGAACAACTGTCAGTTACTT+AGG | - | tig0018513:51644-51663 | None:intergenic | 40.0% | |
| TGTAGGAATTCTTCAGCAGT+TGG | - | tig0018513:51786-51805 | None:intergenic | 40.0% | |
| TGTAACTTCTGCACTTGATC+TGG | + | tig0018513:51818-51837 | Msa1367360:CDS | 40.0% | |
| !! | GGAAATGGGTTTTTCATCGG+CGG | - | tig0018513:48193-48212 | None:intergenic | 45.0% |
| GTCTGCATAGCTGATATTGG+AGG | - | tig0018513:48300-48319 | None:intergenic | 45.0% | |
| TCCGTCTGCATAGCTGATAT+TGG | - | tig0018513:48303-48322 | None:intergenic | 45.0% | |
| AATATCAGCTATGCAGACGG+AGG | + | tig0018513:48302-48321 | Msa1367360:intron | 45.0% | |
| CTAACGGAGAGTTAGGATCT+TGG | - | tig0018513:48359-48378 | None:intergenic | 45.0% | |
| ! | AGGAACACCTTCTGGAAAAC+TGG | - | tig0018513:48458-48477 | None:intergenic | 45.0% |
| !!! | GTTTTCCAGAAGGTGTTCCT+TGG | + | tig0018513:48458-48477 | Msa1367360:intron | 45.0% |
| GTTCCTTGGGTACGTTATCA+TGG | + | tig0018513:48472-48491 | Msa1367360:CDS | 45.0% | |
| ACACTGTCAACCCCAAAAGA+AGG | - | tig0018513:48544-48563 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGGGTTGACAGTGT+TGG | + | tig0018513:48544-48563 | Msa1367360:CDS | 45.0% |
| ATCATTAATGCTGGCACTGC+TGG | + | tig0018513:48625-48644 | Msa1367360:CDS | 45.0% | |
| ATCCTTCAGATTGGGAAGTG+GGG | + | tig0018513:48779-48798 | Msa1367360:intron | 45.0% | |
| ACAGTCGAGGGTTGTTGTAT+CGG | + | tig0018513:48951-48970 | Msa1367360:intron | 45.0% | |
| TGTATCGGGTGAGAAGGAAA+AGG | + | tig0018513:48966-48985 | Msa1367360:intron | 45.0% | |
| ATCTGGGCGTATCACTTCAT+TGG | + | tig0018513:49045-49064 | Msa1367360:intron | 45.0% | |
| TCTGGGCGTATCACTTCATT+GGG | + | tig0018513:49046-49065 | Msa1367360:intron | 45.0% | |
| GCAGCGAAAACACATGAAAG+CGG | - | tig0018513:49276-49295 | None:intergenic | 45.0% | |
| ! | ATGTGTTTTCGCTGCGATAC+CGG | + | tig0018513:49281-49300 | Msa1367360:intron | 45.0% |
| CTCCCACCAATTTCTGATTC+TGG | + | tig0018513:49307-49326 | Msa1367360:intron | 45.0% | |
| !!! | TTTGTTTTCTGGTTGGGGGA+AGG | + | tig0018513:49864-49883 | Msa1367360:intron | 45.0% |
| CACACACACTACTCAAGCAA+TGG | - | tig0018513:50135-50154 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTCTAA+CGG | + | tig0018513:50180-50199 | Msa1367360:intron | 45.0% | |
| ! | AGCTGGTAATGTATAGCTCC+TGG | + | tig0018513:50205-50224 | Msa1367360:intron | 45.0% |
| ! | GCTGGTAATGTATAGCTCCT+GGG | + | tig0018513:50206-50225 | Msa1367360:intron | 45.0% |
| GGAAGGGTTAGATCCATTGT+AGG | + | tig0018513:50243-50262 | Msa1367360:intron | 45.0% | |
| ACCCAGAAGAACTGGATTGA+AGG | + | tig0018513:50476-50495 | Msa1367360:intron | 45.0% | |
| GTCCTTCAATCCAGTTCTTC+TGG | - | tig0018513:50481-50500 | None:intergenic | 45.0% | |
| !! | GGAAAATTTATGGTGCCACC+AGG | + | tig0018513:50890-50909 | Msa1367360:intron | 45.0% |
| AAGGTAGACCAGTACCTTCT+TGG | + | tig0018513:51031-51050 | Msa1367360:intron | 45.0% | |
| AGGTAGACCAGTACCTTCTT+GGG | + | tig0018513:51032-51051 | Msa1367360:intron | 45.0% | |
| CTGAAACCCAATTTACGTGC+AGG | + | tig0018513:51065-51084 | Msa1367360:intron | 45.0% | |
| CCCAATTTACGTGCAGGATA+TGG | + | tig0018513:51071-51090 | Msa1367360:intron | 45.0% | |
| GTTAGACACCAACACAACAC+CGG | + | tig0018513:51156-51175 | Msa1367360:intron | 45.0% | |
| !! | TACATATGCCGGTGTTGTGT+TGG | - | tig0018513:51167-51186 | None:intergenic | 45.0% |
| CAGTAGACAATTTAGCCACC+TGG | - | tig0018513:51409-51428 | None:intergenic | 45.0% | |
| CAGGTGGCTAAATTGTCTAC+TGG | + | tig0018513:51407-51426 | Msa1367360:intron | 45.0% | |
| CTCTTTAGATATGACACCGC+AGG | + | tig0018513:51433-51452 | Msa1367360:CDS | 45.0% | |
| CAATATTGGCCACAAGAGAG+TGG | - | tig0018513:52034-52053 | None:intergenic | 45.0% | |
| !! | GGAAATGGGTTTTTCATCGG+CGG | - | tig0018513:48193-48212 | None:intergenic | 45.0% |
| GTCTGCATAGCTGATATTGG+AGG | - | tig0018513:48300-48319 | None:intergenic | 45.0% | |
| TCCGTCTGCATAGCTGATAT+TGG | - | tig0018513:48303-48322 | None:intergenic | 45.0% | |
| AATATCAGCTATGCAGACGG+AGG | + | tig0018513:48302-48321 | Msa1367360:intron | 45.0% | |
| CTAACGGAGAGTTAGGATCT+TGG | - | tig0018513:48359-48378 | None:intergenic | 45.0% | |
| ! | AGGAACACCTTCTGGAAAAC+TGG | - | tig0018513:48458-48477 | None:intergenic | 45.0% |
| !!! | GTTTTCCAGAAGGTGTTCCT+TGG | + | tig0018513:48458-48477 | Msa1367360:intron | 45.0% |
| GTTCCTTGGGTACGTTATCA+TGG | + | tig0018513:48472-48491 | Msa1367360:CDS | 45.0% | |
| ACACTGTCAACCCCAAAAGA+AGG | - | tig0018513:48544-48563 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGGGTTGACAGTGT+TGG | + | tig0018513:48544-48563 | Msa1367360:CDS | 45.0% |
| ATCATTAATGCTGGCACTGC+TGG | + | tig0018513:48625-48644 | Msa1367360:CDS | 45.0% | |
| ATCCTTCAGATTGGGAAGTG+GGG | + | tig0018513:48779-48798 | Msa1367360:intron | 45.0% | |
| ACAGTCGAGGGTTGTTGTAT+CGG | + | tig0018513:48951-48970 | Msa1367360:intron | 45.0% | |
| TGTATCGGGTGAGAAGGAAA+AGG | + | tig0018513:48966-48985 | Msa1367360:intron | 45.0% | |
| ATCTGGGCGTATCACTTCAT+TGG | + | tig0018513:49045-49064 | Msa1367360:intron | 45.0% | |
| TCTGGGCGTATCACTTCATT+GGG | + | tig0018513:49046-49065 | Msa1367360:intron | 45.0% | |
| GCAGCGAAAACACATGAAAG+CGG | - | tig0018513:49276-49295 | None:intergenic | 45.0% | |
| ! | ATGTGTTTTCGCTGCGATAC+CGG | + | tig0018513:49281-49300 | Msa1367360:intron | 45.0% |
| CTCCCACCAATTTCTGATTC+TGG | + | tig0018513:49307-49326 | Msa1367360:intron | 45.0% | |
| !!! | TTTGTTTTCTGGTTGGGGGA+AGG | + | tig0018513:49864-49883 | Msa1367360:intron | 45.0% |
| CACACACACTACTCAAGCAA+TGG | - | tig0018513:50135-50154 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTCTAA+CGG | + | tig0018513:50180-50199 | Msa1367360:intron | 45.0% | |
| ! | AGCTGGTAATGTATAGCTCC+TGG | + | tig0018513:50205-50224 | Msa1367360:intron | 45.0% |
| ! | GCTGGTAATGTATAGCTCCT+GGG | + | tig0018513:50206-50225 | Msa1367360:intron | 45.0% |
| GGAAGGGTTAGATCCATTGT+AGG | + | tig0018513:50243-50262 | Msa1367360:intron | 45.0% | |
| ACCCAGAAGAACTGGATTGA+AGG | + | tig0018513:50476-50495 | Msa1367360:intron | 45.0% | |
| GTCCTTCAATCCAGTTCTTC+TGG | - | tig0018513:50481-50500 | None:intergenic | 45.0% | |
| !! | GGAAAATTTATGGTGCCACC+AGG | + | tig0018513:50890-50909 | Msa1367360:intron | 45.0% |
| AAGGTAGACCAGTACCTTCT+TGG | + | tig0018513:51031-51050 | Msa1367360:intron | 45.0% | |
| AGGTAGACCAGTACCTTCTT+GGG | + | tig0018513:51032-51051 | Msa1367360:intron | 45.0% | |
| CTGAAACCCAATTTACGTGC+AGG | + | tig0018513:51065-51084 | Msa1367360:intron | 45.0% | |
| CCCAATTTACGTGCAGGATA+TGG | + | tig0018513:51071-51090 | Msa1367360:intron | 45.0% | |
| GTTAGACACCAACACAACAC+CGG | + | tig0018513:51156-51175 | Msa1367360:intron | 45.0% | |
| !! | TACATATGCCGGTGTTGTGT+TGG | - | tig0018513:51167-51186 | None:intergenic | 45.0% |
| CAGTAGACAATTTAGCCACC+TGG | - | tig0018513:51409-51428 | None:intergenic | 45.0% | |
| CAGGTGGCTAAATTGTCTAC+TGG | + | tig0018513:51407-51426 | Msa1367360:intron | 45.0% | |
| CTCTTTAGATATGACACCGC+AGG | + | tig0018513:51433-51452 | Msa1367360:CDS | 45.0% | |
| CAATATTGGCCACAAGAGAG+TGG | - | tig0018513:52034-52053 | None:intergenic | 45.0% | |
| !!! | TGATTTTATTTTATTATATT+AGG | + | tig0018513:48389-48408 | Msa1367360:intron | 5.0% |
| !!! | GATTTTATTTTATTATATTA+GGG | + | tig0018513:48390-48409 | Msa1367360:intron | 5.0% |
| !!! | TGATTTTATTTTATTATATT+AGG | + | tig0018513:48389-48408 | Msa1367360:intron | 5.0% |
| !!! | GATTTTATTTTATTATATTA+GGG | + | tig0018513:48390-48409 | Msa1367360:intron | 5.0% |
| ATTAATGCTGGCACTGCTGG+TGG | + | tig0018513:48628-48647 | Msa1367360:CDS | 50.0% | |
| TCCTTCAGATTGGGAAGTGG+GGG | + | tig0018513:48780-48799 | Msa1367360:intron | 50.0% | |
| !! | ACTGTTTCTGGTGGCTGTTG+TGG | - | tig0018513:48936-48955 | None:intergenic | 50.0% |
| CAACAACCCTCGACTGTTTC+TGG | - | tig0018513:48948-48967 | None:intergenic | 50.0% | |
| CAGTCGAGGGTTGTTGTATC+GGG | + | tig0018513:48952-48971 | Msa1367360:intron | 50.0% | |
| GGTTGTTGTATCGGGTGAGA+AGG | + | tig0018513:48960-48979 | Msa1367360:intron | 50.0% | |
| GGCGTATCACTTCATTGGGA+AGG | + | tig0018513:49050-49069 | Msa1367360:intron | 50.0% | |
| AGAAGACCATCGGAATCGAC+AGG | + | tig0018513:49236-49255 | Msa1367360:intron | 50.0% | |
| !! | TGCATTCCTGTCGATTCCGA+TGG | - | tig0018513:49245-49264 | None:intergenic | 50.0% |
| GCGAAAACACATGAAAGCGG+TGG | - | tig0018513:49273-49292 | None:intergenic | 50.0% | |
| GATCTACTCAAGCACGCAGA+TGG | + | tig0018513:49329-49348 | Msa1367360:intron | 50.0% | |
| !!! | GGAGAGTCTGTAGTTTTGGC+AGG | - | tig0018513:49769-49788 | None:intergenic | 50.0% |
| CGTGCATGCCAAAATCTGCT+CGG | + | tig0018513:49892-49911 | Msa1367360:intron | 50.0% | |
| !!! | TGCAAGCACCGAGCAGATTT+TGG | - | tig0018513:49903-49922 | None:intergenic | 50.0% |
| ! | TCGGTGCTTGCAATGTTGTG+CGG | + | tig0018513:49911-49930 | Msa1367360:intron | 50.0% |
| GTGTGTGTCTAACGGTAAGC+TGG | + | tig0018513:50188-50207 | Msa1367360:intron | 50.0% | |
| GTATAGCTCCTGGGATAGCA+TGG | + | tig0018513:50215-50234 | Msa1367360:intron | 50.0% | |
| TCCTGGGATAGCATGGTCTA+GGG | + | tig0018513:50222-50241 | Msa1367360:intron | 50.0% | |
| GGATAGCATGGTCTAGGGAA+GGG | + | tig0018513:50227-50246 | Msa1367360:intron | 50.0% | |
| ATAACAGCCAAAACCCCTGG+TGG | - | tig0018513:50908-50927 | None:intergenic | 50.0% | |
| ACTTGATCTGGCTGTCGAAC+AGG | + | tig0018513:51830-51849 | Msa1367360:CDS | 50.0% | |
| CCACAAGAGAGTGGTATGGT+TGG | - | tig0018513:52025-52044 | None:intergenic | 50.0% | |
| CCAACCATACCACTCTCTTG+TGG | + | tig0018513:52022-52041 | Msa1367360:three_prime_UTR | 50.0% | |
| TTGGCCACAAGAGAGTGGTA+TGG | - | tig0018513:52029-52048 | None:intergenic | 50.0% | |
| ATTAATGCTGGCACTGCTGG+TGG | + | tig0018513:48628-48647 | Msa1367360:CDS | 50.0% | |
| TCCTTCAGATTGGGAAGTGG+GGG | + | tig0018513:48780-48799 | Msa1367360:intron | 50.0% | |
| !! | ACTGTTTCTGGTGGCTGTTG+TGG | - | tig0018513:48936-48955 | None:intergenic | 50.0% |
| CAACAACCCTCGACTGTTTC+TGG | - | tig0018513:48948-48967 | None:intergenic | 50.0% | |
| CAGTCGAGGGTTGTTGTATC+GGG | + | tig0018513:48952-48971 | Msa1367360:intron | 50.0% | |
| GGTTGTTGTATCGGGTGAGA+AGG | + | tig0018513:48960-48979 | Msa1367360:intron | 50.0% | |
| GGCGTATCACTTCATTGGGA+AGG | + | tig0018513:49050-49069 | Msa1367360:intron | 50.0% | |
| AGAAGACCATCGGAATCGAC+AGG | + | tig0018513:49236-49255 | Msa1367360:intron | 50.0% | |
| !! | TGCATTCCTGTCGATTCCGA+TGG | - | tig0018513:49245-49264 | None:intergenic | 50.0% |
| GCGAAAACACATGAAAGCGG+TGG | - | tig0018513:49273-49292 | None:intergenic | 50.0% | |
| GATCTACTCAAGCACGCAGA+TGG | + | tig0018513:49329-49348 | Msa1367360:intron | 50.0% | |
| !!! | GGAGAGTCTGTAGTTTTGGC+AGG | - | tig0018513:49769-49788 | None:intergenic | 50.0% |
| CGTGCATGCCAAAATCTGCT+CGG | + | tig0018513:49892-49911 | Msa1367360:intron | 50.0% | |
| !!! | TGCAAGCACCGAGCAGATTT+TGG | - | tig0018513:49903-49922 | None:intergenic | 50.0% |
| ! | TCGGTGCTTGCAATGTTGTG+CGG | + | tig0018513:49911-49930 | Msa1367360:intron | 50.0% |
| GTGTGTGTCTAACGGTAAGC+TGG | + | tig0018513:50188-50207 | Msa1367360:intron | 50.0% | |
| GTATAGCTCCTGGGATAGCA+TGG | + | tig0018513:50215-50234 | Msa1367360:intron | 50.0% | |
| TCCTGGGATAGCATGGTCTA+GGG | + | tig0018513:50222-50241 | Msa1367360:intron | 50.0% | |
| GGATAGCATGGTCTAGGGAA+GGG | + | tig0018513:50227-50246 | Msa1367360:intron | 50.0% | |
| ATAACAGCCAAAACCCCTGG+TGG | - | tig0018513:50908-50927 | None:intergenic | 50.0% | |
| ACTTGATCTGGCTGTCGAAC+AGG | + | tig0018513:51830-51849 | Msa1367360:CDS | 50.0% | |
| CCACAAGAGAGTGGTATGGT+TGG | - | tig0018513:52025-52044 | None:intergenic | 50.0% | |
| CCAACCATACCACTCTCTTG+TGG | + | tig0018513:52022-52041 | Msa1367360:three_prime_UTR | 50.0% | |
| TTGGCCACAAGAGAGTGGTA+TGG | - | tig0018513:52029-52048 | None:intergenic | 50.0% | |
| CGTACCCAAGGAACACCTTC+TGG | - | tig0018513:48466-48485 | None:intergenic | 55.0% | |
| TCCCCCACTTCCCAATCTGA+AGG | - | tig0018513:48784-48803 | None:intergenic | 55.0% | |
| GGAAGTGGGGGATCCTAACA+CGG | + | tig0018513:48792-48811 | Msa1367360:intron | 55.0% | |
| !! | GTTTCTGGTGGCTGTTGTGG+AGG | - | tig0018513:48933-48952 | None:intergenic | 55.0% |
| ACAGCCACCAGAAACAGTCG+AGG | + | tig0018513:48938-48957 | Msa1367360:intron | 55.0% | |
| CAGCCACCAGAAACAGTCGA+GGG | + | tig0018513:48939-48958 | Msa1367360:intron | 55.0% | |
| !! | CAACCCTCGACTGTTTCTGG+TGG | - | tig0018513:48945-48964 | None:intergenic | 55.0% |
| !! | CAGAAATTGGTGGGAGCGTC+CGG | - | tig0018513:49303-49322 | None:intergenic | 55.0% |
| CTCCTGGGATAGCATGGTCT+AGG | + | tig0018513:50221-50240 | Msa1367360:intron | 55.0% | |
| TCCCTAGACCATGCTATCCC+AGG | - | tig0018513:50226-50245 | None:intergenic | 55.0% | |
| GGGATAGCATGGTCTAGGGA+AGG | + | tig0018513:50226-50245 | Msa1367360:intron | 55.0% | |
| !!! | TATGGTGCCACCAGGGGTTT+TGG | + | tig0018513:50898-50917 | Msa1367360:intron | 55.0% |
| TAAGCAACAGCTGCTCCCTG+TGG | - | tig0018513:51693-51712 | None:intergenic | 55.0% | |
| CGTACCCAAGGAACACCTTC+TGG | - | tig0018513:48466-48485 | None:intergenic | 55.0% | |
| TCCCCCACTTCCCAATCTGA+AGG | - | tig0018513:48784-48803 | None:intergenic | 55.0% | |
| GGAAGTGGGGGATCCTAACA+CGG | + | tig0018513:48792-48811 | Msa1367360:intron | 55.0% | |
| !! | GTTTCTGGTGGCTGTTGTGG+AGG | - | tig0018513:48933-48952 | None:intergenic | 55.0% |
| ACAGCCACCAGAAACAGTCG+AGG | + | tig0018513:48938-48957 | Msa1367360:intron | 55.0% | |
| CAGCCACCAGAAACAGTCGA+GGG | + | tig0018513:48939-48958 | Msa1367360:intron | 55.0% | |
| !! | CAACCCTCGACTGTTTCTGG+TGG | - | tig0018513:48945-48964 | None:intergenic | 55.0% |
| !! | CAGAAATTGGTGGGAGCGTC+CGG | - | tig0018513:49303-49322 | None:intergenic | 55.0% |
| CTCCTGGGATAGCATGGTCT+AGG | + | tig0018513:50221-50240 | Msa1367360:intron | 55.0% | |
| TCCCTAGACCATGCTATCCC+AGG | - | tig0018513:50226-50245 | None:intergenic | 55.0% | |
| GGGATAGCATGGTCTAGGGA+AGG | + | tig0018513:50226-50245 | Msa1367360:intron | 55.0% | |
| !!! | TATGGTGCCACCAGGGGTTT+TGG | + | tig0018513:50898-50917 | Msa1367360:intron | 55.0% |
| TAAGCAACAGCTGCTCCCTG+TGG | - | tig0018513:51693-51712 | None:intergenic | 55.0% | |
| TGGCACTGCTGGTGGCTTCA+AGG | + | tig0018513:48636-48655 | Msa1367360:CDS | 60.0% | |
| TGCTGGTGGCTTCAAGGCCA+GGG | + | tig0018513:48642-48661 | Msa1367360:CDS | 60.0% | |
| AAGGCCAGGGGAGCTACTGT+TGG | + | tig0018513:48655-48674 | Msa1367360:CDS | 60.0% | |
| GTCACCAACAGTAGCTCCCC+TGG | - | tig0018513:48662-48681 | None:intergenic | 60.0% | |
| !! | TGTGGGTTGGGTTCGCAACC+CGG | - | tig0018513:49202-49221 | None:intergenic | 60.0% |
| TGGCACTGCTGGTGGCTTCA+AGG | + | tig0018513:48636-48655 | Msa1367360:CDS | 60.0% | |
| TGCTGGTGGCTTCAAGGCCA+GGG | + | tig0018513:48642-48661 | Msa1367360:CDS | 60.0% | |
| AAGGCCAGGGGAGCTACTGT+TGG | + | tig0018513:48655-48674 | Msa1367360:CDS | 60.0% | |
| GTCACCAACAGTAGCTCCCC+TGG | - | tig0018513:48662-48681 | None:intergenic | 60.0% | |
| !! | TGTGGGTTGGGTTCGCAACC+CGG | - | tig0018513:49202-49221 | None:intergenic | 60.0% |
| CTGCTGGTGGCTTCAAGGCC+AGG | + | tig0018513:48641-48660 | Msa1367360:CDS | 65.0% | |
| GCTGGTGGCTTCAAGGCCAG+GGG | + | tig0018513:48643-48662 | Msa1367360:CDS | 65.0% | |
| CTGCTGGTGGCTTCAAGGCC+AGG | + | tig0018513:48641-48660 | Msa1367360:CDS | 65.0% | |
| GCTGGTGGCTTCAAGGCCAG+GGG | + | tig0018513:48643-48662 | Msa1367360:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018513 | gene | 48035 | 52126 | 48035 | ID=Msa1367360;Name=Msa1367360 |
| tig0018513 | mRNA | 48035 | 52126 | 48035 | ID=Msa1367360-mRNA-1;Parent=Msa1367360;Name=Msa1367360-mRNA-1;_AED=0.08;_eAED=0.08;_QI=16|1|1|1|1|1|6|233|294 |
| tig0018513 | exon | 48035 | 48231 | 48035 | ID=Msa1367360-mRNA-1:exon:15494;Parent=Msa1367360-mRNA-1 |
| tig0018513 | exon | 48310 | 48373 | 48310 | ID=Msa1367360-mRNA-1:exon:15495;Parent=Msa1367360-mRNA-1 |
| tig0018513 | exon | 48459 | 48732 | 48459 | ID=Msa1367360-mRNA-1:exon:15496;Parent=Msa1367360-mRNA-1 |
| tig0018513 | exon | 49979 | 50053 | 49979 | ID=Msa1367360-mRNA-1:exon:15497;Parent=Msa1367360-mRNA-1 |
| tig0018513 | exon | 51410 | 51502 | 51410 | ID=Msa1367360-mRNA-1:exon:15498;Parent=Msa1367360-mRNA-1 |
| tig0018513 | exon | 51696 | 52126 | 51696 | ID=Msa1367360-mRNA-1:exon:15499;Parent=Msa1367360-mRNA-1 |
| tig0018513 | five_prime_UTR | 48035 | 48050 | 48035 | ID=Msa1367360-mRNA-1:five_prime_utr;Parent=Msa1367360-mRNA-1 |
| tig0018513 | CDS | 48051 | 48231 | 48051 | ID=Msa1367360-mRNA-1:cds;Parent=Msa1367360-mRNA-1 |
| tig0018513 | CDS | 48310 | 48373 | 48310 | ID=Msa1367360-mRNA-1:cds;Parent=Msa1367360-mRNA-1 |
| tig0018513 | CDS | 48459 | 48732 | 48459 | ID=Msa1367360-mRNA-1:cds;Parent=Msa1367360-mRNA-1 |
| tig0018513 | CDS | 49979 | 50053 | 49979 | ID=Msa1367360-mRNA-1:cds;Parent=Msa1367360-mRNA-1 |
| tig0018513 | CDS | 51410 | 51502 | 51410 | ID=Msa1367360-mRNA-1:cds;Parent=Msa1367360-mRNA-1 |
| tig0018513 | CDS | 51696 | 51893 | 51696 | ID=Msa1367360-mRNA-1:cds;Parent=Msa1367360-mRNA-1 |
| tig0018513 | three_prime_UTR | 51894 | 52126 | 51894 | ID=Msa1367360-mRNA-1:three_prime_utr;Parent=Msa1367360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
