Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933290 | XP_003618221.1 | 79.630 | 216 | 3 | 1 | 1 | 216 | 1 | 175 | 4.17e-117 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933290 | sp|Q8LGG8|USPAL_ARATH | 58.796 | 216 | 48 | 1 | 1 | 216 | 1 | 175 | 7.97e-85 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933290 | G7KHM7 | 79.630 | 216 | 3 | 1 | 1 | 216 | 1 | 175 | 1.99e-117 | 340 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0933290 | -0.815907 | 7.266713e-52 | -8.615850e-47 |
| Msa0006880 | Msa0933290 | 0.839615 | 1.425154e-57 | -8.615850e-47 |
| Msa0008410 | Msa0933290 | 0.806102 | 9.683713e-50 | -8.615850e-47 |
| Msa0010760 | Msa0933290 | 0.806105 | 9.669754e-50 | -8.615850e-47 |
| Msa0010820 | Msa0933290 | 0.851002 | 1.178049e-60 | -8.615850e-47 |
| Msa0011960 | Msa0933290 | 0.811310 | 7.463040e-51 | -8.615850e-47 |
| Msa0012040 | Msa0933290 | 0.811835 | 5.737826e-51 | -8.615850e-47 |
| Msa0027580 | Msa0933290 | 0.820086 | 8.261128e-53 | -8.615850e-47 |
| Msa0029260 | Msa0933290 | 0.803742 | 3.014852e-49 | -8.615850e-47 |
| Msa0030380 | Msa0933290 | 0.812075 | 5.088588e-51 | -8.615850e-47 |
| Msa0032610 | Msa0933290 | 0.800193 | 1.616308e-48 | -8.615850e-47 |
| Msa0036370 | Msa0933290 | 0.804696 | 1.908340e-49 | -8.615850e-47 |
| Msa0037840 | Msa0933290 | 0.808503 | 2.999274e-50 | -8.615850e-47 |
| Msa0043730 | Msa0933290 | 0.810557 | 1.086413e-50 | -8.615850e-47 |
| Msa0047980 | Msa0933290 | 0.805629 | 1.217046e-49 | -8.615850e-47 |
| Msa0055100 | Msa0933290 | 0.806177 | 9.335426e-50 | -8.615850e-47 |
| Msa0055150 | Msa0933290 | 0.823142 | 1.624423e-53 | -8.615850e-47 |
| Msa0056030 | Msa0933290 | 0.808439 | 3.095229e-50 | -8.615850e-47 |
| Msa0057140 | Msa0933290 | 0.878557 | 2.550208e-69 | -8.615850e-47 |
| Msa0061970 | Msa0933290 | 0.835708 | 1.433762e-56 | -8.615850e-47 |
| Msa0065950 | Msa0933290 | 0.813447 | 2.547299e-51 | -8.615850e-47 |
| Msa0068020 | Msa0933290 | 0.820227 | 7.666344e-53 | -8.615850e-47 |
| Msa0071240 | Msa0933290 | 0.806300 | 8.797380e-50 | -8.615850e-47 |
| Msa0073460 | Msa0933290 | 0.814009 | 1.916349e-51 | -8.615850e-47 |
| Msa0073480 | Msa0933290 | 0.822887 | 1.862387e-53 | -8.615850e-47 |
| Msa0075340 | Msa0933290 | 0.821185 | 4.618141e-53 | -8.615850e-47 |
| Msa0076000 | Msa0933290 | 0.832919 | 7.180463e-56 | -8.615850e-47 |
| Msa0076780 | Msa0933290 | 0.800088 | 1.698137e-48 | -8.615850e-47 |
| Msa0077010 | Msa0933290 | 0.816774 | 4.650397e-52 | -8.615850e-47 |
| Msa0084940 | Msa0933290 | 0.817874 | 2.630046e-52 | -8.615850e-47 |
| Msa0087290 | Msa0933290 | 0.808162 | 3.547181e-50 | -8.615850e-47 |
| Msa0091570 | Msa0933290 | 0.804034 | 2.622314e-49 | -8.615850e-47 |
| Msa0094920 | Msa0933290 | 0.830707 | 2.524111e-55 | -8.615850e-47 |
| Msa0095010 | Msa0933290 | 0.816443 | 5.515125e-52 | -8.615850e-47 |
| Msa0099510 | Msa0933290 | 0.807634 | 4.592824e-50 | -8.615850e-47 |
| Msa0100800 | Msa0933290 | 0.813228 | 2.845792e-51 | -8.615850e-47 |
| Msa0113240 | Msa0933290 | 0.811780 | 5.899428e-51 | -8.615850e-47 |
| Msa0115390 | Msa0933290 | 0.826263 | 2.986638e-54 | -8.615850e-47 |
| Msa0120540 | Msa0933290 | 0.807106 | 5.943291e-50 | -8.615850e-47 |
| Msa0603570 | Msa0933290 | 0.804896 | 1.733117e-49 | -8.615850e-47 |
| Msa0603670 | Msa0933290 | 0.803906 | 2.787367e-49 | -8.615850e-47 |
| Msa0607510 | Msa0933290 | 0.855579 | 5.740202e-62 | -8.615850e-47 |
| Msa0608710 | Msa0933290 | 0.813439 | 2.557876e-51 | -8.615850e-47 |
| Msa0609000 | Msa0933290 | 0.828836 | 7.202591e-55 | -8.615850e-47 |
| Msa0610390 | Msa0933290 | 0.834212 | 3.414260e-56 | -8.615850e-47 |
| Msa0614990 | Msa0933290 | 0.808015 | 3.811054e-50 | -8.615850e-47 |
| Msa0616240 | Msa0933290 | 0.801188 | 1.012806e-48 | -8.615850e-47 |
| Msa0618010 | Msa0933290 | 0.821546 | 3.811408e-53 | -8.615850e-47 |
| Msa0618930 | Msa0933290 | 0.814371 | 1.594119e-51 | -8.615850e-47 |
| Msa0619070 | Msa0933290 | 0.812649 | 3.811386e-51 | -8.615850e-47 |
| Msa0619920 | Msa0933290 | 0.812803 | 3.528226e-51 | -8.615850e-47 |
| Msa0623700 | Msa0933290 | 0.824614 | 7.337270e-54 | -8.615850e-47 |
| Msa0626940 | Msa0933290 | 0.823542 | 1.309552e-53 | -8.615850e-47 |
| Msa0628290 | Msa0933290 | 0.831267 | 1.839293e-55 | -8.615850e-47 |
| Msa0628740 | Msa0933290 | 0.803166 | 3.969366e-49 | -8.615850e-47 |
| Msa0630950 | Msa0933290 | 0.832751 | 7.904386e-56 | -8.615850e-47 |
| Msa0631350 | Msa0933290 | 0.841823 | 3.762300e-58 | -8.615850e-47 |
| Msa0632870 | Msa0933290 | 0.827019 | 1.971614e-54 | -8.615850e-47 |
| Msa0643320 | Msa0933290 | 0.807778 | 4.280549e-50 | -8.615850e-47 |
| Msa0647490 | Msa0933290 | 0.802050 | 6.742901e-49 | -8.615850e-47 |
| Msa0650190 | Msa0933290 | 0.812648 | 3.814717e-51 | -8.615850e-47 |
| Msa0650920 | Msa0933290 | 0.836884 | 7.200717e-57 | -8.615850e-47 |
| Msa0665080 | Msa0933290 | 0.800761 | 1.238506e-48 | -8.615850e-47 |
| Msa0666140 | Msa0933290 | 0.802655 | 5.061118e-49 | -8.615850e-47 |
| Msa0669190 | Msa0933290 | 0.828711 | 7.723425e-55 | -8.615850e-47 |
| Msa0669720 | Msa0933290 | 0.817289 | 3.562696e-52 | -8.615850e-47 |
| Msa0669760 | Msa0933290 | 0.848176 | 7.240081e-60 | -8.615850e-47 |
| Msa0671740 | Msa0933290 | 0.836250 | 1.044619e-56 | -8.615850e-47 |
| Msa0673470 | Msa0933290 | 0.854084 | 1.558059e-61 | -8.615850e-47 |
| Msa0677770 | Msa0933290 | 0.805036 | 1.620286e-49 | -8.615850e-47 |
| Msa0679550 | Msa0933290 | 0.804982 | 1.662991e-49 | -8.615850e-47 |
| Msa0683140 | Msa0933290 | 0.821378 | 4.167523e-53 | -8.615850e-47 |
| Msa0683600 | Msa0933290 | 0.807529 | 4.834239e-50 | -8.615850e-47 |
| Msa0687630 | Msa0933290 | 0.804243 | 2.372364e-49 | -8.615850e-47 |
| Msa0690550 | Msa0933290 | 0.800917 | 1.150693e-48 | -8.615850e-47 |
| Msa0692940 | Msa0933290 | 0.840199 | 1.004203e-57 | -8.615850e-47 |
| Msa0693790 | Msa0933290 | 0.811114 | 8.229728e-51 | -8.615850e-47 |
| Msa0694840 | Msa0933290 | 0.823749 | 1.171179e-53 | -8.615850e-47 |
| Msa0705600 | Msa0933290 | 0.822111 | 2.821786e-53 | -8.615850e-47 |
| Msa0711490 | Msa0933290 | 0.805632 | 1.215195e-49 | -8.615850e-47 |
| Msa0715650 | Msa0933290 | 0.802263 | 6.094133e-49 | -8.615850e-47 |
| Msa0719420 | Msa0933290 | 0.812353 | 4.424353e-51 | -8.615850e-47 |
| Msa0722020 | Msa0933290 | 0.814478 | 1.509554e-51 | -8.615850e-47 |
| Msa0724830 | Msa0933290 | 0.803464 | 3.443756e-49 | -8.615850e-47 |
| Msa0726830 | Msa0933290 | 0.828490 | 8.734245e-55 | -8.615850e-47 |
| Msa0726860 | Msa0933290 | 0.808633 | 2.814084e-50 | -8.615850e-47 |
| Msa0733890 | Msa0933290 | 0.800946 | 1.135305e-48 | -8.615850e-47 |
| Msa0735310 | Msa0933290 | 0.819322 | 1.234356e-52 | -8.615850e-47 |
| Msa0747700 | Msa0933290 | 0.802782 | 4.763595e-49 | -8.615850e-47 |
| Msa0750430 | Msa0933290 | 0.815834 | 7.545119e-52 | -8.615850e-47 |
| Msa0763020 | Msa0933290 | 0.807883 | 4.065247e-50 | -8.615850e-47 |
| Msa0763070 | Msa0933290 | 0.820273 | 7.481599e-53 | -8.615850e-47 |
| Msa0772480 | Msa0933290 | 0.823616 | 1.258251e-53 | -8.615850e-47 |
| Msa0774750 | Msa0933290 | 0.835310 | 1.807309e-56 | -8.615850e-47 |
| Msa0780880 | Msa0933290 | 0.806793 | 6.923467e-50 | -8.615850e-47 |
| Msa0781270 | Msa0933290 | 0.803315 | 3.696196e-49 | -8.615850e-47 |
| Msa0784860 | Msa0933290 | 0.854721 | 1.019492e-61 | -8.615850e-47 |
| Msa0787750 | Msa0933290 | 0.812053 | 5.145696e-51 | -8.615850e-47 |
| Msa0789680 | Msa0933290 | 0.813379 | 2.637140e-51 | -8.615850e-47 |
| Msa0790850 | Msa0933290 | 0.804791 | 1.823043e-49 | -8.615850e-47 |
| Msa0791820 | Msa0933290 | 0.810314 | 1.225935e-50 | -8.615850e-47 |
| Msa0792090 | Msa0933290 | 0.802564 | 5.283402e-49 | -8.615850e-47 |
| Msa0793390 | Msa0933290 | 0.860252 | 2.351775e-63 | -8.615850e-47 |
| Msa0798440 | Msa0933290 | 0.839126 | 1.908700e-57 | -8.615850e-47 |
| Msa0802410 | Msa0933290 | 0.805017 | 1.635314e-49 | -8.615850e-47 |
| Msa0805500 | Msa0933290 | 0.872021 | 4.377406e-67 | -8.615850e-47 |
| Msa0806920 | Msa0933290 | 0.810832 | 9.476020e-51 | -8.615850e-47 |
| Msa0809770 | Msa0933290 | 0.816043 | 6.778581e-52 | -8.615850e-47 |
| Msa0812290 | Msa0933290 | 0.809797 | 1.583946e-50 | -8.615850e-47 |
| Msa0814250 | Msa0933290 | 0.813295 | 2.751828e-51 | -8.615850e-47 |
| Msa0814320 | Msa0933290 | 0.817908 | 2.582944e-52 | -8.615850e-47 |
| Msa0821680 | Msa0933290 | 0.831248 | 1.859054e-55 | -8.615850e-47 |
| Msa0822770 | Msa0933290 | 0.804348 | 2.255644e-49 | -8.615850e-47 |
| Msa0823090 | Msa0933290 | 0.832342 | 9.984459e-56 | -8.615850e-47 |
| Msa0830540 | Msa0933290 | 0.810700 | 1.011805e-50 | -8.615850e-47 |
| Msa0839200 | Msa0933290 | 0.840713 | 7.366371e-58 | -8.615850e-47 |
| Msa0121590 | Msa0933290 | 0.805238 | 1.469773e-49 | -8.615850e-47 |
| Msa0121820 | Msa0933290 | 0.809451 | 1.879867e-50 | -8.615850e-47 |
| Msa0126840 | Msa0933290 | 0.807690 | 4.469226e-50 | -8.615850e-47 |
| Msa0127040 | Msa0933290 | 0.810070 | 1.384044e-50 | -8.615850e-47 |
| Msa0136390 | Msa0933290 | 0.829072 | 6.316103e-55 | -8.615850e-47 |
| Msa0137040 | Msa0933290 | 0.810001 | 1.431948e-50 | -8.615850e-47 |
| Msa0137820 | Msa0933290 | 0.826321 | 2.892280e-54 | -8.615850e-47 |
| Msa0138160 | Msa0933290 | 0.837972 | 3.791255e-57 | -8.615850e-47 |
| Msa0148120 | Msa0933290 | 0.805663 | 1.197424e-49 | -8.615850e-47 |
| Msa0152170 | Msa0933290 | 0.802983 | 4.329701e-49 | -8.615850e-47 |
| Msa0155430 | Msa0933290 | 0.805597 | 1.236082e-49 | -8.615850e-47 |
| Msa0159420 | Msa0933290 | 0.801564 | 8.485135e-49 | -8.615850e-47 |
| Msa0165950 | Msa0933290 | 0.839164 | 1.866088e-57 | -8.615850e-47 |
| Msa0166750 | Msa0933290 | 0.827615 | 1.418961e-54 | -8.615850e-47 |
| Msa0167480 | Msa0933290 | 0.819732 | 9.950075e-53 | -8.615850e-47 |
| Msa0169300 | Msa0933290 | 0.800904 | 1.157666e-48 | -8.615850e-47 |
| Msa0173740 | Msa0933290 | 0.815813 | 7.627548e-52 | -8.615850e-47 |
| Msa0173820 | Msa0933290 | 0.811394 | 7.155618e-51 | -8.615850e-47 |
| Msa0174770 | Msa0933290 | 0.802276 | 6.058107e-49 | -8.615850e-47 |
| Msa0175200 | Msa0933290 | 0.827355 | 1.638183e-54 | -8.615850e-47 |
| Msa0177230 | Msa0933290 | 0.831506 | 1.605812e-55 | -8.615850e-47 |
| Msa0177270 | Msa0933290 | 0.814841 | 1.254427e-51 | -8.615850e-47 |
| Msa0178990 | Msa0933290 | 0.831324 | 1.780832e-55 | -8.615850e-47 |
| Msa0182280 | Msa0933290 | 0.827171 | 1.812799e-54 | -8.615850e-47 |
| Msa0183460 | Msa0933290 | 0.818891 | 1.547059e-52 | -8.615850e-47 |
| Msa0186770 | Msa0933290 | 0.821558 | 3.788226e-53 | -8.615850e-47 |
| Msa0188730 | Msa0933290 | -0.803025 | 4.243613e-49 | -8.615850e-47 |
| Msa0189520 | Msa0933290 | 0.811793 | 5.861026e-51 | -8.615850e-47 |
| Msa0191050 | Msa0933290 | 0.803312 | 3.702094e-49 | -8.615850e-47 |
| Msa0194480 | Msa0933290 | 0.804690 | 1.913546e-49 | -8.615850e-47 |
| Msa0199690 | Msa0933290 | 0.860461 | 2.032246e-63 | -8.615850e-47 |
| Msa0214710 | Msa0933290 | 0.802034 | 6.793013e-49 | -8.615850e-47 |
| Msa0226330 | Msa0933290 | 0.810482 | 1.127843e-50 | -8.615850e-47 |
| Msa0231660 | Msa0933290 | 0.814937 | 1.194386e-51 | -8.615850e-47 |
| Msa0232550 | Msa0933290 | 0.800908 | 1.155611e-48 | -8.615850e-47 |
| Msa0233350 | Msa0933290 | 0.816254 | 6.079072e-52 | -8.615850e-47 |
| Msa0236270 | Msa0933290 | 0.833831 | 4.254782e-56 | -8.615850e-47 |
| Msa0369220 | Msa0933290 | 0.809141 | 2.190627e-50 | -8.615850e-47 |
| Msa0371250 | Msa0933290 | 0.831790 | 1.367372e-55 | -8.615850e-47 |
| Msa0372340 | Msa0933290 | 0.826859 | 2.152500e-54 | -8.615850e-47 |
| Msa0372660 | Msa0933290 | 0.807535 | 4.820197e-50 | -8.615850e-47 |
| Msa0372670 | Msa0933290 | 0.826512 | 2.604296e-54 | -8.615850e-47 |
| Msa0376690 | Msa0933290 | 0.853788 | 1.895086e-61 | -8.615850e-47 |
| Msa0377530 | Msa0933290 | 0.804020 | 2.638971e-49 | -8.615850e-47 |
| Msa0379410 | Msa0933290 | 0.842199 | 2.991478e-58 | -8.615850e-47 |
| Msa0380040 | Msa0933290 | 0.838251 | 3.213512e-57 | -8.615850e-47 |
| Msa0381700 | Msa0933290 | 0.813078 | 3.070770e-51 | -8.615850e-47 |
| Msa0384880 | Msa0933290 | 0.822577 | 2.199257e-53 | -8.615850e-47 |
| Msa0385490 | Msa0933290 | 0.813667 | 2.278958e-51 | -8.615850e-47 |
| Msa0386040 | Msa0933290 | 0.810129 | 1.343988e-50 | -8.615850e-47 |
| Msa0387910 | Msa0933290 | 0.837915 | 3.920612e-57 | -8.615850e-47 |
| Msa0388050 | Msa0933290 | 0.805730 | 1.159284e-49 | -8.615850e-47 |
| Msa0392940 | Msa0933290 | 0.842131 | 3.118925e-58 | -8.615850e-47 |
| Msa0394400 | Msa0933290 | 0.814851 | 1.247798e-51 | -8.615850e-47 |
| Msa0402330 | Msa0933290 | 0.837408 | 5.291687e-57 | -8.615850e-47 |
| Msa0403190 | Msa0933290 | 0.848640 | 5.387527e-60 | -8.615850e-47 |
| Msa0416400 | Msa0933290 | 0.817060 | 4.010186e-52 | -8.615850e-47 |
| Msa0419520 | Msa0933290 | 0.830824 | 2.362676e-55 | -8.615850e-47 |
| Msa0421260 | Msa0933290 | 0.815152 | 1.070430e-51 | -8.615850e-47 |
| Msa0425220 | Msa0933290 | 0.811441 | 6.992068e-51 | -8.615850e-47 |
| Msa0426810 | Msa0933290 | 0.808675 | 2.755954e-50 | -8.615850e-47 |
| Msa0429290 | Msa0933290 | 0.860583 | 1.866595e-63 | -8.615850e-47 |
| Msa0429950 | Msa0933290 | 0.835825 | 1.339073e-56 | -8.615850e-47 |
| Msa0442200 | Msa0933290 | 0.822022 | 2.958367e-53 | -8.615850e-47 |
| Msa0451570 | Msa0933290 | 0.817666 | 2.930263e-52 | -8.615850e-47 |
| Msa0458060 | Msa0933290 | 0.819781 | 9.696266e-53 | -8.615850e-47 |
| Msa0465550 | Msa0933290 | 0.846979 | 1.545243e-59 | -8.615850e-47 |
| Msa0467220 | Msa0933290 | 0.821522 | 3.861251e-53 | -8.615850e-47 |
| Msa0468130 | Msa0933290 | 0.815463 | 9.126335e-52 | -8.615850e-47 |
| Msa0471590 | Msa0933290 | 0.860909 | 1.486145e-63 | -8.615850e-47 |
| Msa0473830 | Msa0933290 | -0.808963 | 2.391832e-50 | -8.615850e-47 |
| Msa0475580 | Msa0933290 | 0.845823 | 3.193621e-59 | -8.615850e-47 |
| Msa0479330 | Msa0933290 | 0.813082 | 3.063941e-51 | -8.615850e-47 |
| Msa0481480 | Msa0933290 | 0.811504 | 6.773121e-51 | -8.615850e-47 |
| Msa0481810 | Msa0933290 | 0.847131 | 1.404163e-59 | -8.615850e-47 |
| Msa0239490 | Msa0933290 | 0.807976 | 3.885832e-50 | -8.615850e-47 |
| Msa0239940 | Msa0933290 | 0.807413 | 5.115766e-50 | -8.615850e-47 |
| Msa0242230 | Msa0933290 | 0.806486 | 8.035689e-50 | -8.615850e-47 |
| Msa0242680 | Msa0933290 | 0.811238 | 7.737846e-51 | -8.615850e-47 |
| Msa0244270 | Msa0933290 | 0.806241 | 9.050072e-50 | -8.615850e-47 |
| Msa0251770 | Msa0933290 | 0.809688 | 1.672323e-50 | -8.615850e-47 |
| Msa0260210 | Msa0933290 | 0.825203 | 5.326535e-54 | -8.615850e-47 |
| Msa0266210 | Msa0933290 | 0.816767 | 4.666570e-52 | -8.615850e-47 |
| Msa0271360 | Msa0933290 | 0.854454 | 1.217968e-61 | -8.615850e-47 |
| Msa0280430 | Msa0933290 | 0.856139 | 3.936473e-62 | -8.615850e-47 |
| Msa0287670 | Msa0933290 | 0.807113 | 5.923240e-50 | -8.615850e-47 |
| Msa0291520 | Msa0933290 | 0.841993 | 3.390887e-58 | -8.615850e-47 |
| Msa0296920 | Msa0933290 | 0.829152 | 6.038201e-55 | -8.615850e-47 |
| Msa0304290 | Msa0933290 | 0.827102 | 1.882963e-54 | -8.615850e-47 |
| Msa0304330 | Msa0933290 | 0.831765 | 1.386396e-55 | -8.615850e-47 |
| Msa0304590 | Msa0933290 | 0.805109 | 1.564286e-49 | -8.615850e-47 |
| Msa0304660 | Msa0933290 | 0.815098 | 1.100132e-51 | -8.615850e-47 |
| Msa0305890 | Msa0933290 | 0.819768 | 9.767198e-53 | -8.615850e-47 |
| Msa0308200 | Msa0933290 | 0.808037 | 3.769770e-50 | -8.615850e-47 |
| Msa0308220 | Msa0933290 | 0.817319 | 3.507215e-52 | -8.615850e-47 |
| Msa0309880 | Msa0933290 | 0.802741 | 4.858028e-49 | -8.615850e-47 |
| Msa0323560 | Msa0933290 | 0.822483 | 2.312528e-53 | -8.615850e-47 |
| Msa0327410 | Msa0933290 | 0.806260 | 8.966594e-50 | -8.615850e-47 |
| Msa0331700 | Msa0933290 | 0.813922 | 2.003060e-51 | -8.615850e-47 |
| Msa0340810 | Msa0933290 | 0.816582 | 5.133401e-52 | -8.615850e-47 |
| Msa0355270 | Msa0933290 | 0.833909 | 4.067662e-56 | -8.615850e-47 |
| Msa0359560 | Msa0933290 | 0.809599 | 1.747225e-50 | -8.615850e-47 |
| Msa0485120 | Msa0933290 | 0.801019 | 1.096929e-48 | -8.615850e-47 |
| Msa0485850 | Msa0933290 | 0.811011 | 8.664947e-51 | -8.615850e-47 |
| Msa0489610 | Msa0933290 | 0.832099 | 1.146743e-55 | -8.615850e-47 |
| Msa0493920 | Msa0933290 | 0.841659 | 4.155856e-58 | -8.615850e-47 |
| Msa0505060 | Msa0933290 | 0.803495 | 3.391919e-49 | -8.615850e-47 |
| Msa0508590 | Msa0933290 | 0.802098 | 6.589860e-49 | -8.615850e-47 |
| Msa0508870 | Msa0933290 | 0.809806 | 1.577423e-50 | -8.615850e-47 |
| Msa0509390 | Msa0933290 | 0.804954 | 1.685978e-49 | -8.615850e-47 |
| Msa0511490 | Msa0933290 | 0.854489 | 1.189803e-61 | -8.615850e-47 |
| Msa0513440 | Msa0933290 | 0.826037 | 3.379125e-54 | -8.615850e-47 |
| Msa0517490 | Msa0933290 | 0.801786 | 7.639529e-49 | -8.615850e-47 |
| Msa0518070 | Msa0933290 | -0.806492 | 8.012652e-50 | -8.615850e-47 |
| Msa0519220 | Msa0933290 | 0.863002 | 3.396200e-64 | -8.615850e-47 |
| Msa0523680 | Msa0933290 | 0.837539 | 4.896417e-57 | -8.615850e-47 |
| Msa0524180 | Msa0933290 | 0.814268 | 1.679811e-51 | -8.615850e-47 |
| Msa0527910 | Msa0933290 | 0.801870 | 7.340519e-49 | -8.615850e-47 |
| Msa0534410 | Msa0933290 | 0.824762 | 6.771960e-54 | -8.615850e-47 |
| Msa0534900 | Msa0933290 | 0.823156 | 1.612101e-53 | -8.615850e-47 |
| Msa0536650 | Msa0933290 | 0.816672 | 4.900716e-52 | -8.615850e-47 |
| Msa0545080 | Msa0933290 | 0.823657 | 1.231236e-53 | -8.615850e-47 |
| Msa0550570 | Msa0933290 | 0.805140 | 1.541010e-49 | -8.615850e-47 |
| Msa0555200 | Msa0933290 | 0.818747 | 1.667706e-52 | -8.615850e-47 |
| Msa0556790 | Msa0933290 | 0.817130 | 3.868979e-52 | -8.615850e-47 |
| Msa0577220 | Msa0933290 | 0.803766 | 2.979986e-49 | -8.615850e-47 |
| Msa0580950 | Msa0933290 | 0.824196 | 9.199024e-54 | -8.615850e-47 |
| Msa0581130 | Msa0933290 | 0.810141 | 1.335674e-50 | -8.615850e-47 |
| Msa0588240 | Msa0933290 | 0.821099 | 4.832767e-53 | -8.615850e-47 |
| Msa0589190 | Msa0933290 | 0.835368 | 1.748085e-56 | -8.615850e-47 |
| Msa0590650 | Msa0933290 | 0.851814 | 6.943873e-61 | -8.615850e-47 |
| Msa0590680 | Msa0933290 | 0.805695 | 1.178832e-49 | -8.615850e-47 |
| Msa0592720 | Msa0933290 | 0.831701 | 1.438018e-55 | -8.615850e-47 |
| Msa0594910 | Msa0933290 | 0.860718 | 1.698602e-63 | -8.615850e-47 |
| Msa0600610 | Msa0933290 | 0.808241 | 3.411327e-50 | -8.615850e-47 |
| Msa0602370 | Msa0933290 | 0.816663 | 4.924269e-52 | -8.615850e-47 |
| Msa0842830 | Msa0933290 | 0.800888 | 1.166596e-48 | -8.615850e-47 |
| Msa0847080 | Msa0933290 | 0.850732 | 1.403598e-60 | -8.615850e-47 |
| Msa0852860 | Msa0933290 | 0.800953 | 1.131420e-48 | -8.615850e-47 |
| Msa0863450 | Msa0933290 | 0.817001 | 4.135192e-52 | -8.615850e-47 |
| Msa0863870 | Msa0933290 | 0.801935 | 7.118346e-49 | -8.615850e-47 |
| Msa0869120 | Msa0933290 | 0.929493 | 6.418223e-93 | -8.615850e-47 |
| Msa0871780 | Msa0933290 | 0.807105 | 5.947645e-50 | -8.615850e-47 |
| Msa0872440 | Msa0933290 | 0.801301 | 9.605627e-49 | -8.615850e-47 |
| Msa0874500 | Msa0933290 | 0.839883 | 1.213580e-57 | -8.615850e-47 |
| Msa0874570 | Msa0933290 | 0.812037 | 5.186406e-51 | -8.615850e-47 |
| Msa0895310 | Msa0933290 | 0.801324 | 9.499205e-49 | -8.615850e-47 |
| Msa0900630 | Msa0933290 | 0.833388 | 5.488456e-56 | -8.615850e-47 |
| Msa0901320 | Msa0933290 | 0.825436 | 4.691576e-54 | -8.615850e-47 |
| Msa0901450 | Msa0933290 | 0.806733 | 7.128701e-50 | -8.615850e-47 |
| Msa0905380 | Msa0933290 | 0.827182 | 1.801661e-54 | -8.615850e-47 |
| Msa0913240 | Msa0933290 | 0.807684 | 4.483013e-50 | -8.615850e-47 |
| Msa0921870 | Msa0933290 | 0.810761 | 9.814541e-51 | -8.615850e-47 |
| Msa0924150 | Msa0933290 | -0.808886 | 2.484104e-50 | -8.615850e-47 |
| Msa0926460 | Msa0933290 | 0.837226 | 5.889887e-57 | -8.615850e-47 |
| Msa0930140 | Msa0933290 | 0.817796 | 2.737655e-52 | -8.615850e-47 |
| Msa0933290 | Msa0937330 | 0.838767 | 2.364858e-57 | -8.615850e-47 |
| Msa0933290 | Msa0942070 | 0.815160 | 1.065906e-51 | -8.615850e-47 |
| Msa0933290 | Msa0947760 | 0.805409 | 1.353580e-49 | -8.615850e-47 |
| Msa0933290 | Msa0965860 | 0.827941 | 1.184176e-54 | -8.615850e-47 |
| Msa0933290 | Msa0967370 | 0.815851 | 7.478955e-52 | -8.615850e-47 |
| Msa0933290 | Msa0970030 | 0.806654 | 7.405387e-50 | -8.615850e-47 |
| Msa0933290 | Msa0976330 | 0.812472 | 4.167691e-51 | -8.615850e-47 |
| Msa0933290 | Msa0980020 | 0.808833 | 2.549672e-50 | -8.615850e-47 |
| Msa0933290 | Msa0982270 | 0.804414 | 2.185230e-49 | -8.615850e-47 |
| Msa0933290 | Msa0993240 | 0.837980 | 3.773677e-57 | -8.615850e-47 |
| Msa0933290 | Msa1000690 | 0.814053 | 1.873747e-51 | -8.615850e-47 |
| Msa0933290 | Msa1012830 | 0.807966 | 3.904004e-50 | -8.615850e-47 |
| Msa0933290 | Msa1021540 | 0.815094 | 1.102560e-51 | -8.615850e-47 |
| Msa0933290 | Msa1023180 | 0.801529 | 8.625001e-49 | -8.615850e-47 |
| Msa0933290 | Msa1024750 | 0.803868 | 2.838903e-49 | -8.615850e-47 |
| Msa0933290 | Msa1025940 | 0.829298 | 5.565537e-55 | -8.615850e-47 |
| Msa0933290 | Msa1029970 | 0.815725 | 7.978510e-52 | -8.615850e-47 |
| Msa0933290 | Msa1040890 | 0.816983 | 4.172759e-52 | -8.615850e-47 |
| Msa0933290 | Msa1043050 | 0.803256 | 3.801210e-49 | -8.615850e-47 |
| Msa0933290 | Msa1046020 | 0.803921 | 2.767694e-49 | -8.615850e-47 |
| Msa0933290 | Msa1047400 | 0.829532 | 4.884275e-55 | -8.615850e-47 |
| Msa0933290 | Msa1050200 | 0.864796 | 9.394523e-65 | -8.615850e-47 |
| Msa0933290 | Msa1072460 | -0.800746 | 1.246964e-48 | -8.615850e-47 |
| Msa0933290 | Msa1073400 | 0.825658 | 4.157176e-54 | -8.615850e-47 |
| Msa0933290 | Msa1083210 | 0.809083 | 2.254130e-50 | -8.615850e-47 |
| Msa0933290 | Msa1083880 | 0.827488 | 1.521550e-54 | -8.615850e-47 |
| Msa0933290 | Msa1084470 | 0.813413 | 2.592008e-51 | -8.615850e-47 |
| Msa0933290 | Msa1088290 | 0.820572 | 6.391119e-53 | -8.615850e-47 |
| Msa0933290 | Msa1089840 | 0.849421 | 3.268789e-60 | -8.615850e-47 |
| Msa0933290 | Msa1091100 | 0.807954 | 3.926490e-50 | -8.615850e-47 |
| Msa0933290 | Msa1094430 | 0.825017 | 5.896227e-54 | -8.615850e-47 |
| Msa0933290 | Msa1100720 | 0.836922 | 7.043137e-57 | -8.615850e-47 |
| Msa0933290 | Msa1108820 | 0.830355 | 3.076826e-55 | -8.615850e-47 |
| Msa0933290 | Msa1120810 | 0.804243 | 2.372364e-49 | -8.615850e-47 |
| Msa0933290 | Msa1122820 | 0.828283 | 9.796090e-55 | -8.615850e-47 |
| Msa0933290 | Msa1126120 | -0.800698 | 1.275698e-48 | -8.615850e-47 |
| Msa0933290 | Msa1126850 | 0.825472 | 4.602211e-54 | -8.615850e-47 |
| Msa0933290 | Msa1133250 | 0.805501 | 1.294971e-49 | -8.615850e-47 |
| Msa0933290 | Msa1134090 | 0.815876 | 7.382818e-52 | -8.615850e-47 |
| Msa0933290 | Msa1138520 | 0.815787 | 7.730231e-52 | -8.615850e-47 |
| Msa0933290 | Msa1138870 | 0.849854 | 2.474692e-60 | -8.615850e-47 |
| Msa0933290 | Msa1143840 | 0.835602 | 1.525443e-56 | -8.615850e-47 |
| Msa0933290 | Msa1150710 | 0.800959 | 1.128213e-48 | -8.615850e-47 |
| Msa0933290 | Msa1152520 | 0.840045 | 1.101126e-57 | -8.615850e-47 |
| Msa0933290 | Msa1156870 | 0.804099 | 2.541340e-49 | -8.615850e-47 |
| Msa0933290 | Msa1160360 | 0.807400 | 5.150492e-50 | -8.615850e-47 |
| Msa0933290 | Msa1165960 | 0.811044 | 8.521572e-51 | -8.615850e-47 |
| Msa0933290 | Msa1166010 | 0.806898 | 6.576492e-50 | -8.615850e-47 |
| Msa0933290 | Msa1166870 | 0.825228 | 5.256421e-54 | -8.615850e-47 |
| Msa0933290 | Msa1171870 | 0.814745 | 1.317634e-51 | -8.615850e-47 |
| Msa0933290 | Msa1176360 | 0.827481 | 1.527383e-54 | -8.615850e-47 |
| Msa0933290 | Msa1176980 | 0.802221 | 6.217469e-49 | -8.615850e-47 |
| Msa0933290 | Msa1179950 | 0.809908 | 1.499490e-50 | -8.615850e-47 |
| Msa0933290 | Msa1179980 | 0.817593 | 3.043301e-52 | -8.615850e-47 |
| Msa0933290 | Msa1201560 | 0.815515 | 8.884887e-52 | -8.615850e-47 |
| Msa0933290 | Msa1211000 | 0.803749 | 3.004885e-49 | -8.615850e-47 |
| Msa0933290 | Msa1217830 | 0.807046 | 6.119131e-50 | -8.615850e-47 |
| Msa0933290 | Msa1224810 | 0.815128 | 1.083260e-51 | -8.615850e-47 |
| Msa0933290 | Msa1227690 | 0.812087 | 5.056704e-51 | -8.615850e-47 |
| Msa0933290 | Msa1237940 | 0.818255 | 2.156463e-52 | -8.615850e-47 |
| Msa0933290 | Msa1253810 | 0.824637 | 7.247683e-54 | -8.615850e-47 |
| Msa0933290 | Msa1255040 | -0.816560 | 5.193785e-52 | -8.615850e-47 |
| Msa0933290 | Msa1259400 | 0.831294 | 1.810932e-55 | -8.615850e-47 |
| Msa0933290 | Msa1259530 | 0.801603 | 8.327677e-49 | -8.615850e-47 |
| Msa0933290 | Msa1260130 | 0.838247 | 3.220723e-57 | -8.615850e-47 |
| Msa0933290 | Msa1267260 | 0.819228 | 1.296358e-52 | -8.615850e-47 |
| Msa0933290 | Msa1269300 | 0.851523 | 8.395788e-61 | -8.615850e-47 |
| Msa0933290 | Msa1270620 | 0.814516 | 1.480972e-51 | -8.615850e-47 |
| Msa0933290 | Msa1270690 | 0.813304 | 2.739227e-51 | -8.615850e-47 |
| Msa0933290 | Msa1276190 | 0.804773 | 1.838982e-49 | -8.615850e-47 |
| Msa0933290 | Msa1294070 | 0.834823 | 2.398975e-56 | -8.615850e-47 |
| Msa0933290 | Msa1295490 | -0.811908 | 5.531472e-51 | -8.615850e-47 |
| Msa0933290 | Msa1296830 | 0.807467 | 4.983755e-50 | -8.615850e-47 |
| Msa0933290 | Msa1299010 | 0.805683 | 1.185601e-49 | -8.615850e-47 |
| Msa0933290 | Msa1300050 | 0.835889 | 1.290273e-56 | -8.615850e-47 |
| Msa0933290 | Msa1302190 | -0.816832 | 4.513284e-52 | -8.615850e-47 |
| Msa0933290 | Msa1303160 | 0.829115 | 6.164328e-55 | -8.615850e-47 |
| Msa0933290 | Msa1304820 | 0.824333 | 8.543329e-54 | -8.615850e-47 |
| Msa0933290 | Msa1306430 | 0.816536 | 5.258677e-52 | -8.615850e-47 |
| Msa0933290 | Msa1306990 | 0.816681 | 4.879656e-52 | -8.615850e-47 |
| Msa0933290 | Msa1307740 | 0.808360 | 3.218391e-50 | -8.615850e-47 |
| Msa0933290 | Msa1316830 | 0.802418 | 5.663411e-49 | -8.615850e-47 |
| Msa0933290 | Msa1317270 | 0.808193 | 3.492205e-50 | -8.615850e-47 |
| Msa0933290 | Msa1328700 | 0.809855 | 1.539506e-50 | -8.615850e-47 |
| Msa0933290 | Msa1331710 | 0.810032 | 1.409999e-50 | -8.615850e-47 |
| Msa0933290 | Msa1340020 | 0.808621 | 2.831234e-50 | -8.615850e-47 |
| Msa0933290 | Msa1342640 | -0.811903 | 5.545465e-51 | -8.615850e-47 |
| Msa0933290 | Msa1348850 | 0.819311 | 1.241414e-52 | -8.615850e-47 |
| Msa0933290 | Msa1350690 | 0.807346 | 5.286745e-50 | -8.615850e-47 |
| Msa0933290 | Msa1356440 | 0.810645 | 1.039642e-50 | -8.615850e-47 |
| Msa0933290 | Msa1358430 | 0.815495 | 8.976642e-52 | -8.615850e-47 |
| Msa0933290 | Msa1359390 | 0.805700 | 1.176064e-49 | -8.615850e-47 |
| Msa0933290 | Msa1362090 | 0.803750 | 3.003981e-49 | -8.615850e-47 |
| Msa0933290 | Msa1365860 | 0.818147 | 2.281730e-52 | -8.615850e-47 |
| Msa0933290 | Msa1366650 | 0.823147 | 1.620031e-53 | -8.615850e-47 |
| Msa0933290 | Msa1367360 | 0.816804 | 4.578354e-52 | -8.615850e-47 |
| Msa0933290 | Msa1371090 | 0.807263 | 5.505748e-50 | -8.615850e-47 |
| Msa0933290 | Msa1371240 | 0.806909 | 6.542302e-50 | -8.615850e-47 |
| Msa0933290 | Msa1375990 | 0.806932 | 6.467720e-50 | -8.615850e-47 |
| Msa0933290 | Msa1383350 | 0.800899 | 1.160756e-48 | -8.615850e-47 |
| Msa0933290 | Msa1388860 | 0.802172 | 6.363862e-49 | -8.615850e-47 |
| Msa0933290 | Msa1397050 | 0.804401 | 2.198560e-49 | -8.615850e-47 |
| Msa0933290 | Msa1397810 | 0.825689 | 4.087723e-54 | -8.615850e-47 |
| Msa0933290 | Msa1397940 | 0.825586 | 4.324639e-54 | -8.615850e-47 |
| Msa0933290 | Msa1404010 | 0.802953 | 4.393322e-49 | -8.615850e-47 |
| Msa0933290 | Msa1408150 | 0.828020 | 1.133633e-54 | -8.615850e-47 |
| Msa0933290 | Msa1423910 | 0.812517 | 4.074799e-51 | -8.615850e-47 |
| Msa0933290 | Msa1426920 | 0.810761 | 9.814901e-51 | -8.615850e-47 |
| Msa0933290 | Msa1431040 | 0.805053 | 1.607096e-49 | -8.615850e-47 |
| Msa0933290 | Msa1435750 | 0.836020 | 1.194806e-56 | -8.615850e-47 |
| Msa0933290 | Msa1436520 | 0.816646 | 4.967671e-52 | -8.615850e-47 |
| Msa0933290 | Msa1438640 | 0.807836 | 4.161375e-50 | -8.615850e-47 |
| Msa0933290 | Msa1440000 | 0.800253 | 1.571897e-48 | -8.615850e-47 |
| Msa0933290 | Msa1442850 | 0.801402 | 9.157420e-49 | -8.615850e-47 |
| Msa0933290 | Msa1443100 | 0.809309 | 2.016796e-50 | -8.615850e-47 |
| Msa0933290 | Msa1444310 | 0.802626 | 5.130422e-49 | -8.615850e-47 |
| Msa0933290 | Msa1448630 | 0.814781 | 1.293317e-51 | -8.615850e-47 |
| Msa0933290 | Msa1450280 | 0.803452 | 3.462196e-49 | -8.615850e-47 |
| Msa0933290 | Msa1452470 | 0.852749 | 3.764299e-61 | -8.615850e-47 |
| Msa0933290 | Msa1453620 | 0.812007 | 5.263818e-51 | -8.615850e-47 |
| Msa0933290 | Msa1454950 | 0.812331 | 4.473592e-51 | -8.615850e-47 |
| Msa0933290 | Msa1461280 | 0.830185 | 3.385899e-55 | -8.615850e-47 |
| Msa0933290 | Msa1465960 | 0.847968 | 8.263679e-60 | -8.615850e-47 |
| Msa0933290 | Msa1466300 | 0.806974 | 6.339665e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933290 | MtrunA17_Chr6g0450171 | 79.630 | 216 | 3 | 1 | 1 | 216 | 1 | 175 | 3.84e-121 | 340 |
| Msa0933290 | MtrunA17_Chr1g0176311 | 31.959 | 97 | 66 | 0 | 107 | 203 | 85 | 181 | 4.71e-16 | 73.2 |
| Msa0933290 | MtrunA17_Chr1g0176321 | 34.653 | 101 | 63 | 2 | 107 | 207 | 75 | 172 | 6.70e-15 | 70.1 |
| Msa0933290 | MtrunA17_Chr4g0001641 | 50.943 | 53 | 26 | 0 | 151 | 203 | 13 | 65 | 7.94e-14 | 64.3 |
| Msa0933290 | MtrunA17_Chr5g0427291 | 50.943 | 53 | 26 | 0 | 151 | 203 | 118 | 170 | 7.01e-13 | 64.7 |
| Msa0933290 | MtrunA17_Chr1g0194801 | 23.810 | 210 | 101 | 5 | 1 | 204 | 1 | 157 | 9.90e-13 | 63.5 |
| Msa0933290 | MtrunA17_Chr1g0192651 | 22.857 | 210 | 111 | 5 | 3 | 212 | 6 | 164 | 1.54e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0933290 | AT5G14680.1 | 57.407 | 216 | 51 | 1 | 1 | 216 | 1 | 175 | 2.02e-86 | 253 |
| Msa0933290 | AT3G01520.1 | 58.796 | 216 | 48 | 1 | 1 | 216 | 1 | 175 | 8.10e-86 | 251 |
| Msa0933290 | AT3G11930.2 | 32.203 | 118 | 73 | 1 | 93 | 203 | 76 | 193 | 5.89e-19 | 81.6 |
| Msa0933290 | AT3G11930.4 | 35.052 | 97 | 63 | 0 | 107 | 203 | 98 | 194 | 6.20e-19 | 81.6 |
| Msa0933290 | AT3G11930.1 | 35.052 | 97 | 63 | 0 | 107 | 203 | 96 | 192 | 6.34e-19 | 81.6 |
| Msa0933290 | AT1G68300.1 | 33.333 | 153 | 92 | 3 | 61 | 206 | 11 | 160 | 1.66e-18 | 79.3 |
| Msa0933290 | AT3G58450.1 | 37.113 | 97 | 61 | 0 | 107 | 203 | 92 | 188 | 3.08e-18 | 79.7 |
| Msa0933290 | AT3G58450.2 | 39.535 | 86 | 52 | 0 | 118 | 203 | 96 | 181 | 4.05e-17 | 76.6 |
| Msa0933290 | AT1G09740.2 | 36.957 | 92 | 58 | 0 | 118 | 209 | 79 | 170 | 4.11e-15 | 70.9 |
| Msa0933290 | AT1G09740.1 | 36.957 | 92 | 58 | 0 | 118 | 209 | 79 | 170 | 4.11e-15 | 70.9 |
| Msa0933290 | AT3G62550.1 | 29.323 | 133 | 82 | 3 | 85 | 209 | 34 | 162 | 3.10e-14 | 68.2 |
| Msa0933290 | AT3G11930.3 | 28.455 | 123 | 62 | 1 | 107 | 203 | 97 | 219 | 1.18e-13 | 67.8 |
Find 57 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTGTTACGAATGATTT+TGG | 0.101569 | 6_3:-1785356 | None:intergenic |
| CTTGCACCTACAAAAGATTT+TGG | 0.154179 | 6_3:-1789862 | None:intergenic |
| CTCATTCAATATCACTTCTT+TGG | 0.192686 | 6_3:-1788444 | None:intergenic |
| ATGCATGAACTATATCATTT+TGG | 0.240575 | 6_3:+1789835 | Msa0933290:three_prime_UTR |
| GTCAAGAGGTGTAATGAAAT+TGG | 0.240931 | 6_3:+1788016 | Msa0933290:CDS |
| GAGCTTACGGAAGCAGTTTA+TGG | 0.261152 | 6_3:+1786341 | Msa0933290:CDS |
| AAATGGAGCGCGTACTGATA+TGG | 0.271185 | 6_3:-1787309 | None:intergenic |
| TCATTCAATATCACTTCTTT+GGG | 0.324923 | 6_3:-1788443 | None:intergenic |
| TCGAAATACTAGTCATCAAC+AGG | 0.364069 | 6_3:-1789403 | None:intergenic |
| TCAAGAGGTGTAATGAAATT+GGG | 0.368776 | 6_3:+1788017 | Msa0933290:CDS |
| ATGTTATGTTAGGGCATGTT+TGG | 0.395218 | 6_3:+1786292 | Msa0933290:intron |
| GTTGTTGGAAGCAGAGGTCT+TGG | 0.398274 | 6_3:+1788494 | Msa0933290:CDS |
| CTTCCAACAACTAGTAAATC+TGG | 0.412953 | 6_3:-1788482 | None:intergenic |
| GAGCTGAACTGAAGGGTTGT+GGG | 0.415422 | 6_3:+1787273 | Msa0933290:CDS |
| GGAGCTGAACTGAAGGGTTG+TGG | 0.416252 | 6_3:+1787272 | Msa0933290:CDS |
| AGACTCTTTGTGAGAGCTTA+CGG | 0.423369 | 6_3:+1786328 | Msa0933290:CDS |
| GCACCTTTGCTACTGATTGA+AGG | 0.436887 | 6_3:-1785316 | None:intergenic |
| AGCTCCACCCAACAAAGAAA+TGG | 0.440404 | 6_3:-1787326 | None:intergenic |
| GATATTGAATGAGGTGAAAC+GGG | 0.455961 | 6_3:+1788454 | Msa0933290:CDS |
| TGATATTGAATGAGGTGAAA+CGG | 0.457358 | 6_3:+1788453 | Msa0933290:CDS |
| CGTCCAGATTTACTAGTTGT+TGG | 0.459311 | 6_3:+1788479 | Msa0933290:CDS |
| AATGGAGCGCGTACTGATAT+GGG | 0.469998 | 6_3:-1787308 | None:intergenic |
| AGGAACTGACCGTCTTCATC+AGG | 0.480141 | 6_3:-1785415 | None:intergenic |
| GACTAGAGGGACTCATCTGC+TGG | 0.484498 | 6_3:+1787985 | Msa0933290:CDS |
| GTAGCAAAGGTGCTTTCGAT+TGG | 0.487042 | 6_3:+1785326 | Msa0933290:CDS |
| GAATCAACACGAGTTATGAT+TGG | 0.488228 | 6_3:+1785259 | Msa0933290:CDS |
| CTGCTTTATCCATGCTTCAC+AGG | 0.507992 | 6_3:-1788414 | None:intergenic |
| TAGTCATCAACAGGGTCCCT+TGG | 0.510016 | 6_3:-1789394 | None:intergenic |
| TTACTAGTTGTTGGAAGCAG+AGG | 0.512564 | 6_3:+1788488 | Msa0933290:CDS |
| GTGGATAGTATCTATGCATC+GGG | 0.520318 | 6_3:+1787929 | Msa0933290:CDS |
| ATATAGATTACCTGTGTTTG+TGG | 0.521571 | 6_3:+1789432 | Msa0933290:three_prime_UTR |
| TTGCTACTGATTGAAGGATG+TGG | 0.522286 | 6_3:-1785310 | None:intergenic |
| TTTGTAGGTGCAAGATTGCA+TGG | 0.524589 | 6_3:+1789871 | Msa0933290:three_prime_UTR |
| TTGCGTTTGATAGTCATGAC+AGG | 0.533981 | 6_3:-1789358 | None:intergenic |
| CGTGGATAGTATCTATGCAT+CGG | 0.551182 | 6_3:+1787928 | Msa0933290:CDS |
| TTTGCAGGGAGCTGAACTGA+AGG | 0.558798 | 6_3:+1787265 | Msa0933290:intron |
| CAAAGAAGTGATATTGAATG+AGG | 0.559803 | 6_3:+1788445 | Msa0933290:CDS |
| TACAAAGCTATCTGCTTGTG+TGG | 0.567447 | 6_3:+1789621 | Msa0933290:three_prime_UTR |
| AGCTGAACTGAAGGGTTGTG+GGG | 0.572543 | 6_3:+1787274 | Msa0933290:CDS |
| GTGAACGAGTCAAGCTTGAA+AGG | 0.573861 | 6_3:+1785283 | Msa0933290:CDS |
| CTGTGAAGCATGGATAAAGC+AGG | 0.575624 | 6_3:+1788415 | Msa0933290:CDS |
| TGCTGGAATACTTCGTCAAG+AGG | 0.585393 | 6_3:+1788002 | Msa0933290:CDS |
| CATCCTTCAATCAGTAGCAA+AGG | 0.586643 | 6_3:+1785313 | Msa0933290:CDS |
| GATGACTAGTATTTCGACAA+TGG | 0.586991 | 6_3:+1789409 | Msa0933290:exon |
| CAAGAGGTGTAATGAAATTG+GGG | 0.598611 | 6_3:+1788018 | Msa0933290:CDS |
| TGTATGCAGTTGTTCAGTGT+AGG | 0.606294 | 6_3:+1789499 | Msa0933290:three_prime_UTR |
| AACAGCAAGAAAAGACTAGA+GGG | 0.610121 | 6_3:+1787972 | Msa0933290:CDS |
| TGCGTTTGATAGTCATGACA+GGG | 0.634272 | 6_3:-1789357 | None:intergenic |
| GTTCAAGTTCCTGATGAAGA+CGG | 0.636387 | 6_3:+1785406 | Msa0933290:CDS |
| GCAATGCAGATGAAACTCCA+AGG | 0.637395 | 6_3:+1789377 | Msa0933290:CDS |
| TGTAGGTGACCTGTGAAGCA+TGG | 0.639851 | 6_3:+1788405 | Msa0933290:intron |
| AAACAGCAAGAAAAGACTAG+AGG | 0.657657 | 6_3:+1787971 | Msa0933290:CDS |
| TTGCAGGGAGCTGAACTGAA+GGG | 0.663999 | 6_3:+1787266 | Msa0933290:intron |
| CAATGCAGATGAAACTCCAA+GGG | 0.667475 | 6_3:+1789378 | Msa0933290:CDS |
| TGTGAAGCATGGATAAAGCA+GGG | 0.669399 | 6_3:+1788416 | Msa0933290:CDS |
| TCTTGTAGGTTACGATGACG+TGG | 0.674991 | 6_3:+1787910 | Msa0933290:intron |
| CGAAATACTAGTCATCAACA+GGG | 0.682603 | 6_3:-1789402 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAAAAAAAAAAT+TGG | - | chr6_3:1788565-1788584 | None:intergenic | 0.0% |
| !! | AAAGATAAAATAAATTCAAA+CGG | - | chr6_3:1786632-1786651 | None:intergenic | 10.0% |
| !! | ATTCATATTTAAAAATATCA+TGG | - | chr6_3:1788695-1788714 | None:intergenic | 10.0% |
| !!! | TGTTTTTTTTTTTTTTTTGA+AGG | + | chr6_3:1788908-1788927 | Msa0933290:intron | 10.0% |
| !! | TTGATCCAAAAAAAATAAAA+GGG | + | chr6_3:1785127-1785146 | Msa0933290:five_prime_UTR | 15.0% |
| !!! | GTAAAAATTCTTTTTAATGA+TGG | + | chr6_3:1786137-1786156 | Msa0933290:intron | 15.0% |
| !!! | TATTTTGATATGTTATGTTA+GGG | + | chr6_3:1786283-1786302 | Msa0933290:intron | 15.0% |
| !! | ATAATGAATAAAGATTACAA+AGG | - | chr6_3:1787420-1787439 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTTATCTTTGAT+AGG | - | chr6_3:1787560-1787579 | None:intergenic | 15.0% |
| !! | TGGAAAATATGAAAAAAATA+TGG | - | chr6_3:1787770-1787789 | None:intergenic | 15.0% |
| !! | TATTATACAAAGCAAAATAA+AGG | + | chr6_3:1787852-1787871 | Msa0933290:intron | 15.0% |
| !! | ATTATACAAAGCAAAATAAA+GGG | + | chr6_3:1787853-1787872 | Msa0933290:intron | 15.0% |
| !! | AAATTATTGTTTAAAAACCT+CGG | - | chr6_3:1788144-1788163 | None:intergenic | 15.0% |
| !! | CTAAATATTTATACATTTGT+AGG | + | chr6_3:1788388-1788407 | Msa0933290:intron | 15.0% |
| !!! | CAGTTATGTTAATTAATTTT+AGG | + | chr6_3:1788847-1788866 | Msa0933290:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGAAGGA+TGG | + | chr6_3:1788912-1788931 | Msa0933290:intron | 15.0% |
| !! | CTTGATCCAAAAAAAATAAA+AGG | + | chr6_3:1785126-1785145 | Msa0933290:five_prime_UTR | 20.0% |
| !!! | TTCAATTGTGTTATTTTATC+AGG | + | chr6_3:1785676-1785695 | Msa0933290:intron | 20.0% |
| !!! | AAAATTCTTTTTAATGATGG+TGG | + | chr6_3:1786140-1786159 | Msa0933290:intron | 20.0% |
| !!! | GTATTTTGATATGTTATGTT+AGG | + | chr6_3:1786282-1786301 | Msa0933290:intron | 20.0% |
| !! | GCAAATTGAATTGAATAAAA+GGG | - | chr6_3:1786977-1786996 | None:intergenic | 20.0% |
| !!! | TAGGCAAACTTTTATTAAAT+GGG | - | chr6_3:1787541-1787560 | None:intergenic | 20.0% |
| !!! | ATAGGCAAACTTTTATTAAA+TGG | - | chr6_3:1787542-1787561 | None:intergenic | 20.0% |
| !! | TAGATTAAGTTCAAAGTAAA+GGG | - | chr6_3:1787811-1787830 | None:intergenic | 20.0% |
| !! | TTAGATTAAGTTCAAAGTAA+AGG | - | chr6_3:1787812-1787831 | None:intergenic | 20.0% |
| !!! | ATGTATAAATATTTAGCTTG+TGG | - | chr6_3:1788384-1788403 | None:intergenic | 20.0% |
| !! | TATACTGAAATATGTTACTA+AGG | + | chr6_3:1788622-1788641 | Msa0933290:intron | 20.0% |
| !!! | GAAGTATGTTATGAATTTTT+TGG | + | chr6_3:1788722-1788741 | Msa0933290:intron | 20.0% |
| !!! | ACTTCTTTTTATGGAAATTA+TGG | + | chr6_3:1788773-1788792 | Msa0933290:intron | 20.0% |
| !! | GAATAAATATAGAAGAAAAG+AGG | + | chr6_3:1788869-1788888 | Msa0933290:intron | 20.0% |
| !!! | TTACGCCCTTTTATTTTTTT+TGG | - | chr6_3:1785135-1785154 | None:intergenic | 25.0% |
| ! | TCAGTGAAAAATCAAGAAAT+GGG | + | chr6_3:1785232-1785251 | Msa0933290:exon | 25.0% |
| !! | AACATTGTTACGAATGATTT+TGG | - | chr6_3:1785359-1785378 | None:intergenic | 25.0% |
| ! | TCAAATTACTATTGATGTGT+CGG | + | chr6_3:1785608-1785627 | Msa0933290:intron | 25.0% |
| ! | AGAGAAAATGACGTAATTAA+AGG | - | chr6_3:1785752-1785771 | None:intergenic | 25.0% |
| ! | TGTGATCTTAGTAACTAATT+GGG | + | chr6_3:1786463-1786482 | Msa0933290:intron | 25.0% |
| !!! | CTTATTTCTATAAGCTCTTT+AGG | + | chr6_3:1786583-1786602 | Msa0933290:intron | 25.0% |
| !! | TTTGATTAAGTTGTTTGTCA+AGG | + | chr6_3:1786710-1786729 | Msa0933290:intron | 25.0% |
| ! | TTTAGAGAAATTGAAACATC+TGG | + | chr6_3:1786847-1786866 | Msa0933290:intron | 25.0% |
| !!! | AGCTTGATTTGTAATTGATT+GGG | + | chr6_3:1786910-1786929 | Msa0933290:intron | 25.0% |
| ! | CGCAAATTGAATTGAATAAA+AGG | - | chr6_3:1786978-1786997 | None:intergenic | 25.0% |
| ! | TTTATTCAATTCAATTTGCG+AGG | + | chr6_3:1786978-1786997 | Msa0933290:intron | 25.0% |
| ! | TTATTCAATTCAATTTGCGA+GGG | + | chr6_3:1786979-1786998 | Msa0933290:intron | 25.0% |
| ! | TTCTAATTGTGTTATGTTGT+CGG | + | chr6_3:1787369-1787388 | Msa0933290:intron | 25.0% |
| !! | TTGTGATTTTGGATTTTGTT+TGG | + | chr6_3:1788061-1788080 | Msa0933290:intron | 25.0% |
| ! | TCATTCAATATCACTTCTTT+GGG | - | chr6_3:1788446-1788465 | None:intergenic | 25.0% |
| ! | AAAAATTGGACAACTCATAA+TGG | - | chr6_3:1788551-1788570 | None:intergenic | 25.0% |
| !! | AATTGTCAGACTTCTTTTTA+TGG | + | chr6_3:1788764-1788783 | Msa0933290:intron | 25.0% |
| !! | TCCACAATTAAATTGTGTTT+TGG | + | chr6_3:1789144-1789163 | Msa0933290:intron | 25.0% |
| ! | ACCAAAACACAATTTAATTG+TGG | - | chr6_3:1789148-1789167 | None:intergenic | 25.0% |
| ! | TTCAACGAGTAACTTAATTA+CGG | + | chr6_3:1789253-1789272 | Msa0933290:intron | 25.0% |
| !! | ATGCATGAACTATATCATTT+TGG | - | chr6_3:1789835-1789854 | None:intergenic | 25.0% |
| !! | ATGCATGAACTATATCATTT+TGG | + | chr6_3:1789835-1789854 | Msa0933290:three_prime_UTR | 25.0% |
| CTCAGTGAAAAATCAAGAAA+TGG | + | chr6_3:1785231-1785250 | Msa0933290:exon | 30.0% | |
| !! | GTTACGAATGATTTTGGAAA+CGG | - | chr6_3:1785353-1785372 | None:intergenic | 30.0% |
| TGAGAACATGACATAATTGA+AGG | - | chr6_3:1785591-1785610 | None:intergenic | 30.0% | |
| AATCACATGTGTCGTAAATA+TGG | - | chr6_3:1785653-1785672 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | - | chr6_3:1785661-1785680 | None:intergenic | 30.0% | |
| TACTACTGATATCAATGTGT+CGG | + | chr6_3:1785949-1785968 | Msa0933290:intron | 30.0% | |
| TGTAGATTGAGTTTGAACAT+AGG | + | chr6_3:1786246-1786265 | Msa0933290:intron | 30.0% | |
| CTAAGATCACACATCAAATA+CGG | - | chr6_3:1786454-1786473 | None:intergenic | 30.0% | |
| GTGTGATCTTAGTAACTAAT+TGG | + | chr6_3:1786462-1786481 | Msa0933290:intron | 30.0% | |
| CAAACACTTGTAATGTTGTT+TGG | + | chr6_3:1786514-1786533 | Msa0933290:intron | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | - | chr6_3:1786569-1786588 | None:intergenic | 30.0% | |
| ACATGCATATCTATATGATG+AGG | + | chr6_3:1786670-1786689 | Msa0933290:intron | 30.0% | |
| CATGCATATCTATATGATGA+GGG | + | chr6_3:1786671-1786690 | Msa0933290:intron | 30.0% | |
| ATGCATATCTATATGATGAG+GGG | + | chr6_3:1786672-1786691 | Msa0933290:intron | 30.0% | |
| CTTAATCAAACACAATGCAT+AGG | - | chr6_3:1786700-1786719 | None:intergenic | 30.0% | |
| !! | GAAAGTTTGGTTTGTTACTT+GGG | + | chr6_3:1786732-1786751 | Msa0933290:intron | 30.0% |
| !! | GAGCTTGATTTGTAATTGAT+TGG | + | chr6_3:1786909-1786928 | Msa0933290:intron | 30.0% |
| !! | AAAAAGTATCGCATTTAGTG+TGG | + | chr6_3:1787014-1787033 | Msa0933290:intron | 30.0% |
| TAAACTTTCGATGATCCTAT+TGG | + | chr6_3:1787134-1787153 | Msa0933290:intron | 30.0% | |
| ! | TATTGTTTGTTGGCTGTTAT+TGG | + | chr6_3:1787484-1787503 | Msa0933290:intron | 30.0% |
| TGATCAAATTCATCATCTCA+GGG | - | chr6_3:1787655-1787674 | None:intergenic | 30.0% | |
| TCTCTGTTATATCTTTCTCT+TGG | + | chr6_3:1787713-1787732 | Msa0933290:intron | 30.0% | |
| CTCTGTTATATCTTTCTCTT+GGG | + | chr6_3:1787714-1787733 | Msa0933290:intron | 30.0% | |
| TTATATCTTTCTCTTGGGTT+CGG | + | chr6_3:1787719-1787738 | Msa0933290:intron | 30.0% | |
| ATGGCAAGAATACATAAAAC+AGG | - | chr6_3:1787751-1787770 | None:intergenic | 30.0% | |
| AATATAAATAAATGCCTCGC+TGG | - | chr6_3:1787836-1787855 | None:intergenic | 30.0% | |
| ! | TCAAGAGGTGTAATGAAATT+GGG | + | chr6_3:1788017-1788036 | Msa0933290:CDS | 30.0% |
| ! | TCTTTTATCACTAGTGCTTA+TGG | - | chr6_3:1788097-1788116 | None:intergenic | 30.0% |
| AAACAGCTTATATTCCTTGA+CGG | - | chr6_3:1788323-1788342 | None:intergenic | 30.0% | |
| CTCATTCAATATCACTTCTT+TGG | - | chr6_3:1788447-1788466 | None:intergenic | 30.0% | |
| CAAAGAAGTGATATTGAATG+AGG | + | chr6_3:1788445-1788464 | Msa0933290:CDS | 30.0% | |
| TGATATTGAATGAGGTGAAA+CGG | + | chr6_3:1788453-1788472 | Msa0933290:CDS | 30.0% | |
| ! | AAAGAGATCATGCATACTTT+TGG | - | chr6_3:1788526-1788545 | None:intergenic | 30.0% |
| TATAGAAGAAAAGAGGAAAG+TGG | + | chr6_3:1788876-1788895 | Msa0933290:intron | 30.0% | |
| !! | GTAGATAGTTTGTTATTGAG+TGG | + | chr6_3:1788934-1788953 | Msa0933290:intron | 30.0% |
| !! | AGTTTGTTATTGAGTGGTTA+TGG | + | chr6_3:1788940-1788959 | Msa0933290:intron | 30.0% |
| !! | GTTTGTTATTGAGTGGTTAT+GGG | + | chr6_3:1788941-1788960 | Msa0933290:intron | 30.0% |
| !! | TGGAAACTGACTTTTATTGA+TGG | - | chr6_3:1789128-1789147 | None:intergenic | 30.0% |
| TGTAAATTTCTGTCAGAAAC+TGG | - | chr6_3:1789172-1789191 | None:intergenic | 30.0% | |
| TCTCTTGAAGTTTCATATAC+TGG | + | chr6_3:1789201-1789220 | Msa0933290:intron | 30.0% | |
| ACTTAATTACGGTCAATAAC+CGG | + | chr6_3:1789264-1789283 | Msa0933290:intron | 30.0% | |
| ATATAGATTACCTGTGTTTG+TGG | + | chr6_3:1789432-1789451 | Msa0933290:three_prime_UTR | 30.0% | |
| !! | ATGAACTATATCATTTTGGC+AGG | - | chr6_3:1789839-1789858 | None:intergenic | 30.0% |
| !! | ATGAACTATATCATTTTGGC+AGG | + | chr6_3:1789839-1789858 | Msa0933290:three_prime_UTR | 30.0% |
| GAATCAACACGAGTTATGAT+TGG | + | chr6_3:1785259-1785278 | Msa0933290:CDS | 35.0% | |
| ! | ATGGATTAAGAGAGAAAGAG+AGG | - | chr6_3:1785438-1785457 | None:intergenic | 35.0% |
| !! | TATGTGTGTGACTTTAGAAC+TGG | + | chr6_3:1786059-1786078 | Msa0933290:intron | 35.0% |
| ! | GAATGTGTCTGATGATGTAA+TGG | + | chr6_3:1786096-1786115 | Msa0933290:intron | 35.0% |
| GAACATAGGTAAGATTGTAG+TGG | + | chr6_3:1786260-1786279 | Msa0933290:intron | 35.0% | |
| ATGTTATGTTAGGGCATGTT+TGG | + | chr6_3:1786292-1786311 | Msa0933290:intron | 35.0% | |
| ! | GCTACTTTCATAAGCTATGA+TGG | - | chr6_3:1786407-1786426 | None:intergenic | 35.0% |
| GTAGCTTATAATTGTGATGC+TGG | + | chr6_3:1786422-1786441 | Msa0933290:intron | 35.0% | |
| GTTGTTTGTCAAGGAAAGTT+TGG | + | chr6_3:1786719-1786738 | Msa0933290:intron | 35.0% | |
| !! | GGAAAGTTTGGTTTGTTACT+TGG | + | chr6_3:1786731-1786750 | Msa0933290:intron | 35.0% |
| GTTCACAAAAATGTTGTGTG+TGG | + | chr6_3:1786821-1786840 | Msa0933290:intron | 35.0% | |
| TTGAGCAAGATGCAAACAAA+TGG | - | chr6_3:1786873-1786892 | None:intergenic | 35.0% | |
| GATTTGTAATTGATTGGGAG+TGG | + | chr6_3:1786915-1786934 | Msa0933290:intron | 35.0% | |
| GCATTTAGTGTGGTTAACAA+GGG | + | chr6_3:1787024-1787043 | Msa0933290:intron | 35.0% | |
| GAAGGTTGTGAATTGTTTAG+AGG | + | chr6_3:1787051-1787070 | Msa0933290:intron | 35.0% | |
| ATCCTATCAAACACCTATCT+TGG | + | chr6_3:1787080-1787099 | Msa0933290:intron | 35.0% | |
| ACATAAACCAAGACCAAGAT+AGG | - | chr6_3:1787096-1787115 | None:intergenic | 35.0% | |
| !! | TTGGTCTTGGTTTATGTGTA+GGG | + | chr6_3:1787099-1787118 | Msa0933290:intron | 35.0% |
| ATACTTCGGATACAAACAAG+TGG | - | chr6_3:1787169-1787188 | None:intergenic | 35.0% | |
| TATCTGTCAATCCTCTATTG+TGG | + | chr6_3:1787441-1787460 | Msa0933290:intron | 35.0% | |
| TCTTCACAATTCCACAATAG+AGG | - | chr6_3:1787455-1787474 | None:intergenic | 35.0% | |
| ACGAGCTGTATATTGTTTGT+TGG | + | chr6_3:1787474-1787493 | Msa0933290:intron | 35.0% | |
| TTTGAACACCAAATGCTACA+AGG | - | chr6_3:1787613-1787632 | None:intergenic | 35.0% | |
| ATCTCAGGGAATGTTGATAT+CGG | - | chr6_3:1787641-1787660 | None:intergenic | 35.0% | |
| GTGATCAAATTCATCATCTC+AGG | - | chr6_3:1787656-1787675 | None:intergenic | 35.0% | |
| TAAAGGGAACTGCAATGTAA+TGG | + | chr6_3:1787869-1787888 | Msa0933290:intron | 35.0% | |
| ACTTGTGTTTCGTTTCTTGT+AGG | + | chr6_3:1787896-1787915 | Msa0933290:intron | 35.0% | |
| AAACAGCAAGAAAAGACTAG+AGG | + | chr6_3:1787971-1787990 | Msa0933290:CDS | 35.0% | |
| AACAGCAAGAAAAGACTAGA+GGG | + | chr6_3:1787972-1787991 | Msa0933290:CDS | 35.0% | |
| ! | GTCAAGAGGTGTAATGAAAT+TGG | + | chr6_3:1788016-1788035 | Msa0933290:CDS | 35.0% |
| ! | CAAGAGGTGTAATGAAATTG+GGG | + | chr6_3:1788018-1788037 | Msa0933290:CDS | 35.0% |
| ! | TTCTGCTCTACTTGTGATTT+TGG | + | chr6_3:1788050-1788069 | Msa0933290:intron | 35.0% |
| ! | GATAGAAAAGCTAGTTTCAC+AGG | - | chr6_3:1788176-1788195 | None:intergenic | 35.0% |
| TCAAGAAAAACATGCAGTCA+AGG | + | chr6_3:1788254-1788273 | Msa0933290:intron | 35.0% | |
| !! | ATATTTAGCTTGTGGTCAAG+TGG | - | chr6_3:1788376-1788395 | None:intergenic | 35.0% |
| GATATTGAATGAGGTGAAAC+GGG | + | chr6_3:1788454-1788473 | Msa0933290:CDS | 35.0% | |
| CTTCCAACAACTAGTAAATC+TGG | - | chr6_3:1788485-1788504 | None:intergenic | 35.0% | |
| !! | GATCATGCATACTTTTGGAA+AGG | - | chr6_3:1788521-1788540 | None:intergenic | 35.0% |
| AGAGACCAAACTCTAATTCT+TGG | + | chr6_3:1788968-1788987 | Msa0933290:intron | 35.0% | |
| GAGACCAAACTCTAATTCTT+GGG | + | chr6_3:1788969-1788988 | Msa0933290:intron | 35.0% | |
| ! | GCACTGTTAGTGAATTTTGT+TGG | + | chr6_3:1789320-1789339 | Msa0933290:CDS | 35.0% |
| CGAAATACTAGTCATCAACA+GGG | - | chr6_3:1789405-1789424 | None:intergenic | 35.0% | |
| TCGAAATACTAGTCATCAAC+AGG | - | chr6_3:1789406-1789425 | None:intergenic | 35.0% | |
| GATGACTAGTATTTCGACAA+TGG | + | chr6_3:1789409-1789428 | Msa0933290:exon | 35.0% | |
| ! | CTTGCACCTACAAAAGATTT+TGG | + | chr6_3:1789704-1789723 | Msa0933290:intron | 35.0% |
| ! | CTTGCACCTACAAAAGATTT+TGG | - | chr6_3:1789704-1789723 | None:intergenic | 35.0% |
| ! | TTGCTACTGATTGAAGGATG+TGG | - | chr6_3:1785313-1785332 | None:intergenic | 40.0% |
| CATCCTTCAATCAGTAGCAA+AGG | + | chr6_3:1785313-1785332 | Msa0933290:CDS | 40.0% | |
| ! | GTTCAAGTTCCTGATGAAGA+CGG | + | chr6_3:1785406-1785425 | Msa0933290:CDS | 40.0% |
| GCGTCTTTGATCAGAAATGT+CGG | - | chr6_3:1785506-1785525 | None:intergenic | 40.0% | |
| ATGTGTCAGACACTTCTGAT+CGG | + | chr6_3:1785535-1785554 | Msa0933290:intron | 40.0% | |
| !! | TGTGACTTTAGAACTGGTTG+TGG | + | chr6_3:1786065-1786084 | Msa0933290:intron | 40.0% |
| AGACTCTTTGTGAGAGCTTA+CGG | + | chr6_3:1786328-1786347 | Msa0933290:CDS | 40.0% | |
| GATGGAGAGCTTATGGAAAT+TGG | - | chr6_3:1786389-1786408 | None:intergenic | 40.0% | |
| ! | AAGCTATGATGGAGAGCTTA+TGG | - | chr6_3:1786396-1786415 | None:intergenic | 40.0% |
| !! | TGTTACTTGGGAAGTGTTTG+TGG | + | chr6_3:1786744-1786763 | Msa0933290:intron | 40.0% |
| TTGTAATTGATTGGGAGTGG+AGG | + | chr6_3:1786918-1786937 | Msa0933290:intron | 40.0% | |
| CGCATTTAGTGTGGTTAACA+AGG | + | chr6_3:1787023-1787042 | Msa0933290:intron | 40.0% | |
| GGTTGTGAATTGTTTAGAGG+TGG | + | chr6_3:1787054-1787073 | Msa0933290:intron | 40.0% | |
| GACCAAGATAGGTGTTTGAT+AGG | - | chr6_3:1787085-1787104 | None:intergenic | 40.0% | |
| TCAAACACCTATCTTGGTCT+TGG | + | chr6_3:1787086-1787105 | Msa0933290:intron | 40.0% | |
| !! | CTTGGTCTTGGTTTATGTGT+AGG | + | chr6_3:1787098-1787117 | Msa0933290:intron | 40.0% |
| TCTTGGTTTATGTGTAGGGA+GGG | + | chr6_3:1787103-1787122 | Msa0933290:intron | 40.0% | |
| ACTTTCGATGATCCTATTGG+TGG | + | chr6_3:1787137-1787156 | Msa0933290:intron | 40.0% | |
| ! | AAGTGGATTCAACCACCAAT+AGG | - | chr6_3:1787152-1787171 | None:intergenic | 40.0% |
| TACTCGTATCAGTTTGTGTG+CGG | + | chr6_3:1787234-1787253 | Msa0933290:intron | 40.0% | |
| AATGCTACAAGGATGCATTC+TGG | - | chr6_3:1787602-1787621 | None:intergenic | 40.0% | |
| GAATGCATCCTTGTAGCATT+TGG | + | chr6_3:1787602-1787621 | Msa0933290:intron | 40.0% | |
| GATAGGCTATCAAAAACGAG+AGG | - | chr6_3:1787678-1787697 | None:intergenic | 40.0% | |
| !! | TCGTTTTTGATAGCCTATCG+AGG | + | chr6_3:1787679-1787698 | Msa0933290:intron | 40.0% |
| !! | CGTTTTTGATAGCCTATCGA+GGG | + | chr6_3:1787680-1787699 | Msa0933290:intron | 40.0% |
| GAAAGATACTTTCCCTCGAT+AGG | - | chr6_3:1787695-1787714 | None:intergenic | 40.0% | |
| GGACAATAGATCACAGTGAA+TGG | - | chr6_3:1787790-1787809 | None:intergenic | 40.0% | |
| GAACTTAATCTAATCCAGCG+AGG | + | chr6_3:1787819-1787838 | Msa0933290:intron | 40.0% | |
| CGTGGATAGTATCTATGCAT+CGG | + | chr6_3:1787928-1787947 | Msa0933290:CDS | 40.0% | |
| GTGGATAGTATCTATGCATC+GGG | + | chr6_3:1787929-1787948 | Msa0933290:CDS | 40.0% | |
| GAAGAATCTTGTAATGACCG+AGG | + | chr6_3:1788124-1788143 | Msa0933290:intron | 40.0% | |
| CTCTACCGTTAGATGAAGAT+TGG | + | chr6_3:1788280-1788299 | Msa0933290:intron | 40.0% | |
| GCTGTCCAATCTTCATCTAA+CGG | - | chr6_3:1788288-1788307 | None:intergenic | 40.0% | |
| CTGTTTGATCTGCATCTGAT+TGG | + | chr6_3:1788337-1788356 | Msa0933290:intron | 40.0% | |
| TGTGAAGCATGGATAAAGCA+GGG | + | chr6_3:1788416-1788435 | Msa0933290:CDS | 40.0% | |
| CGTCCAGATTTACTAGTTGT+TGG | + | chr6_3:1788479-1788498 | Msa0933290:CDS | 40.0% | |
| TTACTAGTTGTTGGAAGCAG+AGG | + | chr6_3:1788488-1788507 | Msa0933290:CDS | 40.0% | |
| GTTATTGAGTGGTTATGGGA+AGG | + | chr6_3:1788945-1788964 | Msa0933290:intron | 40.0% | |
| CTCTCCCAAGAATTAGAGTT+TGG | - | chr6_3:1788976-1788995 | None:intergenic | 40.0% | |
| ACCAAGACTCTCGAATTTCT+TGG | + | chr6_3:1788996-1789015 | Msa0933290:intron | 40.0% | |
| CCAAGACTCTCGAATTTCTT+GGG | + | chr6_3:1788997-1789016 | Msa0933290:intron | 40.0% | |
| CAGAACATGACAACTCAAAC+CGG | - | chr6_3:1789286-1789305 | None:intergenic | 40.0% | |
| !! | TTTGAGTTGTCATGTTCTGC+AGG | + | chr6_3:1789287-1789306 | Msa0933290:intron | 40.0% |
| ! | TTGAGTTGTCATGTTCTGCA+GGG | + | chr6_3:1789288-1789307 | Msa0933290:intron | 40.0% |
| ! | ATGTTCTGCAGGGTTTTTGT+TGG | + | chr6_3:1789298-1789317 | Msa0933290:intron | 40.0% |
| ! | TGCGTTTGATAGTCATGACA+GGG | - | chr6_3:1789360-1789379 | None:intergenic | 40.0% |
| ! | TTGCGTTTGATAGTCATGAC+AGG | - | chr6_3:1789361-1789380 | None:intergenic | 40.0% |
| CAATGCAGATGAAACTCCAA+GGG | + | chr6_3:1789378-1789397 | Msa0933290:CDS | 40.0% | |
| !! | TTTTTCAGCTCCACAAACAC+AGG | - | chr6_3:1789445-1789464 | None:intergenic | 40.0% |
| TGTATGCAGTTGTTCAGTGT+AGG | + | chr6_3:1789499-1789518 | Msa0933290:three_prime_UTR | 40.0% | |
| TACAAAGCTATCTGCTTGTG+TGG | + | chr6_3:1789621-1789640 | Msa0933290:three_prime_UTR | 40.0% | |
| TTTGTAGGTGCAAGATTGCA+TGG | + | chr6_3:1789871-1789890 | Msa0933290:three_prime_UTR | 40.0% | |
| GTGAACGAGTCAAGCTTGAA+AGG | + | chr6_3:1785283-1785302 | Msa0933290:CDS | 45.0% | |
| ! | GCACCTTTGCTACTGATTGA+AGG | - | chr6_3:1785319-1785338 | None:intergenic | 45.0% |
| !! | GTAGCAAAGGTGCTTTCGAT+TGG | + | chr6_3:1785326-1785345 | Msa0933290:CDS | 45.0% |
| GAGCTTACGGAAGCAGTTTA+TGG | + | chr6_3:1786341-1786360 | Msa0933290:CDS | 45.0% | |
| GCTCAAAGACGTCTGATGTA+TGG | + | chr6_3:1786887-1786906 | Msa0933290:intron | 45.0% | |
| TAGTGTGGTTAACAAGGGCT+TGG | + | chr6_3:1787029-1787048 | Msa0933290:intron | 45.0% | |
| GTCTTGGTTTATGTGTAGGG+AGG | + | chr6_3:1787102-1787121 | Msa0933290:intron | 45.0% | |
| AGGGCGACGTTCAAATACTT+CGG | - | chr6_3:1787183-1787202 | None:intergenic | 45.0% | |
| ACTCGTATCAGTTTGTGTGC+GGG | + | chr6_3:1787235-1787254 | Msa0933290:intron | 45.0% | |
| ! | AATGGAGCGCGTACTGATAT+GGG | - | chr6_3:1787311-1787330 | None:intergenic | 45.0% |
| ! | AAATGGAGCGCGTACTGATA+TGG | - | chr6_3:1787312-1787331 | None:intergenic | 45.0% |
| TACGCGCTCCATTTCTTTGT+TGG | + | chr6_3:1787318-1787337 | Msa0933290:intron | 45.0% | |
| ACGCGCTCCATTTCTTTGTT+GGG | + | chr6_3:1787319-1787338 | Msa0933290:intron | 45.0% | |
| AGCTCCACCCAACAAAGAAA+TGG | - | chr6_3:1787329-1787348 | None:intergenic | 45.0% | |
| TTGTGTTATGTTGTCGGCGA+TGG | + | chr6_3:1787375-1787394 | Msa0933290:intron | 45.0% | |
| !! | GATGGTCTTGTGCTGACAAT+TGG | + | chr6_3:1787393-1787412 | Msa0933290:intron | 45.0% |
| TCTTGTAGGTTACGATGACG+TGG | + | chr6_3:1787910-1787929 | Msa0933290:intron | 45.0% | |
| TGCTGGAATACTTCGTCAAG+AGG | + | chr6_3:1788002-1788021 | Msa0933290:CDS | 45.0% | |
| ! | GCTCATATTTTCGACCGTCA+AGG | + | chr6_3:1788306-1788325 | Msa0933290:intron | 45.0% |
| CTGCTTTATCCATGCTTCAC+AGG | - | chr6_3:1788417-1788436 | None:intergenic | 45.0% | |
| CTGTGAAGCATGGATAAAGC+AGG | + | chr6_3:1788415-1788434 | Msa0933290:CDS | 45.0% | |
| CCCAAGAAATTCGAGAGTCT+TGG | - | chr6_3:1789000-1789019 | None:intergenic | 45.0% | |
| GACTCTCGAATTTCTTGGGT+AGG | + | chr6_3:1789001-1789020 | Msa0933290:intron | 45.0% | |
| GCAATGCAGATGAAACTCCA+AGG | + | chr6_3:1789377-1789396 | Msa0933290:CDS | 45.0% | |
| TGTAGGTGCAAGATTGCACA+TGG | - | chr6_3:1789696-1789715 | None:intergenic | 45.0% | |
| ! | GGCAGGCCAAAATCTTTTGT+AGG | - | chr6_3:1789856-1789875 | None:intergenic | 45.0% |
| ! | GGCAGGCCAAAATCTTTTGT+AGG | + | chr6_3:1789856-1789875 | Msa0933290:three_prime_UTR | 45.0% |
| !! | ATCAAAATTAAAAAATAAAA+TGG | - | chr6_3:1785457-1785476 | None:intergenic | 5.0% |
| AGGAACTGACCGTCTTCATC+AGG | - | chr6_3:1785418-1785437 | None:intergenic | 50.0% | |
| TGTCAGACACTTCTGATCGG+CGG | + | chr6_3:1785538-1785557 | Msa0933290:intron | 50.0% | |
| ! | CGGTGTTAGTGTGTCTGTGT+CGG | + | chr6_3:1785969-1785988 | Msa0933290:intron | 50.0% |
| ! | TGTGTCGGTGCTTGGTTTAG+AGG | + | chr6_3:1785984-1786003 | Msa0933290:intron | 50.0% |
| GTGGTTAACAAGGGCTTGGA+AGG | + | chr6_3:1787033-1787052 | Msa0933290:intron | 50.0% | |
| CCACTACCAACAGTGCAAGA+GGG | - | chr6_3:1787202-1787221 | None:intergenic | 50.0% | |
| TATCAGTTTGTGTGCGGGTC+TGG | + | chr6_3:1787240-1787259 | Msa0933290:intron | 50.0% | |
| TTTGCAGGGAGCTGAACTGA+AGG | + | chr6_3:1787265-1787284 | Msa0933290:intron | 50.0% | |
| TTGCAGGGAGCTGAACTGAA+GGG | + | chr6_3:1787266-1787285 | Msa0933290:intron | 50.0% | |
| GAGCTGAACTGAAGGGTTGT+GGG | + | chr6_3:1787273-1787292 | Msa0933290:CDS | 50.0% | |
| AGCTGAACTGAAGGGTTGTG+GGG | + | chr6_3:1787274-1787293 | Msa0933290:CDS | 50.0% | |
| CGCTCCATTTCTTTGTTGGG+TGG | + | chr6_3:1787322-1787341 | Msa0933290:intron | 50.0% | |
| TCTTTGTTGGGTGGAGCTGT+AGG | + | chr6_3:1787331-1787350 | Msa0933290:intron | 50.0% | |
| TGTAGGTGACCTGTGAAGCA+TGG | + | chr6_3:1788405-1788424 | Msa0933290:intron | 50.0% | |
| GTTGTTGGAAGCAGAGGTCT+TGG | + | chr6_3:1788494-1788513 | Msa0933290:CDS | 50.0% | |
| TAGTCATCAACAGGGTCCCT+TGG | - | chr6_3:1789397-1789416 | None:intergenic | 50.0% | |
| ! | AGTGTGTCTGTGTCGGTGCT+TGG | + | chr6_3:1785976-1785995 | Msa0933290:intron | 55.0% |
| TGATTGGGAGTGGAGGCTGA+AGG | + | chr6_3:1786925-1786944 | Msa0933290:intron | 55.0% | |
| ! | CCCTCTTGCACTGTTGGTAG+TGG | + | chr6_3:1787199-1787218 | Msa0933290:intron | 55.0% |
| GCCACTACCAACAGTGCAAG+AGG | - | chr6_3:1787203-1787222 | None:intergenic | 55.0% | |
| !! | CTTGCACTGTTGGTAGTGGC+TGG | + | chr6_3:1787203-1787222 | Msa0933290:intron | 55.0% |
| GGAGCTGAACTGAAGGGTTG+TGG | + | chr6_3:1787272-1787291 | Msa0933290:CDS | 55.0% | |
| GACTAGAGGGACTCATCTGC+TGG | + | chr6_3:1787985-1788004 | Msa0933290:CDS | 55.0% | |
| TGGGAGTGGAGGCTGAAGGT+TGG | + | chr6_3:1786929-1786948 | Msa0933290:intron | 60.0% | |
| GGGAGTGGAGGCTGAAGGTT+GGG | + | chr6_3:1786930-1786949 | Msa0933290:intron | 60.0% | |
| GTGGAGGCTGAAGGTTGGGA+TGG | + | chr6_3:1786934-1786953 | Msa0933290:intron | 60.0% | |
| ACGTCGCCCTCTTGCACTGT+TGG | + | chr6_3:1787193-1787212 | Msa0933290:intron | 60.0% | |
| TGTGCGGGTCTGGTGTTTGC+AGG | + | chr6_3:1787250-1787269 | Msa0933290:intron | 60.0% | |
| GTGCGGGTCTGGTGTTTGCA+GGG | + | chr6_3:1787251-1787270 | Msa0933290:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 1785118 | 1789920 | 1785118 | ID=Msa0933290;Name=Msa0933290 |
| chr6_3 | mRNA | 1785118 | 1789920 | 1785118 | ID=Msa0933290-mRNA-1;Parent=Msa0933290;Name=Msa0933290-mRNA-1;_AED=0.10;_eAED=0.10;_QI=132|0.5|0.71|0.71|0.83|0.71|7|377|216 |
| chr6_3 | exon | 1785118 | 1785427 | 1785118 | ID=Msa0933290-mRNA-1:exon:696;Parent=Msa0933290-mRNA-1 |
| chr6_3 | exon | 1786304 | 1786362 | 1786304 | ID=Msa0933290-mRNA-1:exon:697;Parent=Msa0933290-mRNA-1 |
| chr6_3 | exon | 1787272 | 1787335 | 1787272 | ID=Msa0933290-mRNA-1:exon:698;Parent=Msa0933290-mRNA-1 |
| chr6_3 | exon | 1787918 | 1788039 | 1787918 | ID=Msa0933290-mRNA-1:exon:699;Parent=Msa0933290-mRNA-1 |
| chr6_3 | exon | 1788410 | 1788528 | 1788410 | ID=Msa0933290-mRNA-1:exon:700;Parent=Msa0933290-mRNA-1 |
| chr6_3 | exon | 1789309 | 1789676 | 1789309 | ID=Msa0933290-mRNA-1:exon:701;Parent=Msa0933290-mRNA-1 |
| chr6_3 | exon | 1789803 | 1789920 | 1789803 | ID=Msa0933290-mRNA-1:exon:702;Parent=Msa0933290-mRNA-1 |
| chr6_3 | five_prime_UTR | 1785118 | 1785249 | 1785118 | ID=Msa0933290-mRNA-1:five_prime_utr;Parent=Msa0933290-mRNA-1 |
| chr6_3 | CDS | 1785250 | 1785427 | 1785250 | ID=Msa0933290-mRNA-1:cds;Parent=Msa0933290-mRNA-1 |
| chr6_3 | CDS | 1786304 | 1786362 | 1786304 | ID=Msa0933290-mRNA-1:cds;Parent=Msa0933290-mRNA-1 |
| chr6_3 | CDS | 1787272 | 1787335 | 1787272 | ID=Msa0933290-mRNA-1:cds;Parent=Msa0933290-mRNA-1 |
| chr6_3 | CDS | 1787918 | 1788039 | 1787918 | ID=Msa0933290-mRNA-1:cds;Parent=Msa0933290-mRNA-1 |
| chr6_3 | CDS | 1788410 | 1788528 | 1788410 | ID=Msa0933290-mRNA-1:cds;Parent=Msa0933290-mRNA-1 |
| chr6_3 | CDS | 1789309 | 1789417 | 1789309 | ID=Msa0933290-mRNA-1:cds;Parent=Msa0933290-mRNA-1 |
| chr6_3 | three_prime_UTR | 1789418 | 1789676 | 1789418 | ID=Msa0933290-mRNA-1:three_prime_utr;Parent=Msa0933290-mRNA-1 |
| chr6_3 | three_prime_UTR | 1789803 | 1789920 | 1789803 | ID=Msa0933290-mRNA-1:three_prime_utr;Parent=Msa0933290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
