Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435750 | XP_003603529.1 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 2.48e-102 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435750 | sp|Q9FE62|YLS8_ARATH | 97.183 | 142 | 4 | 0 | 1 | 142 | 1 | 142 | 1.90e-103 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435750 | A0A2K3NA50 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 1.19e-102 | 299 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa1435750 | 0.800958 | 1.128888e-48 | -8.615850e-47 |
| Msa0006880 | Msa1435750 | 0.819813 | 9.536745e-53 | -8.615850e-47 |
| Msa0008410 | Msa1435750 | 0.831936 | 1.258500e-55 | -8.615850e-47 |
| Msa0008840 | Msa1435750 | 0.802735 | 4.871475e-49 | -8.615850e-47 |
| Msa0015300 | Msa1435750 | 0.837876 | 4.012961e-57 | -8.615850e-47 |
| Msa0018620 | Msa1435750 | 0.804641 | 1.959729e-49 | -8.615850e-47 |
| Msa0047980 | Msa1435750 | 0.832694 | 8.168574e-56 | -8.615850e-47 |
| Msa0050730 | Msa1435750 | 0.806992 | 6.283719e-50 | -8.615850e-47 |
| Msa0053570 | Msa1435750 | 0.802321 | 5.931120e-49 | -8.615850e-47 |
| Msa0055150 | Msa1435750 | 0.833302 | 5.765832e-56 | -8.615850e-47 |
| Msa0057140 | Msa1435750 | 0.809720 | 1.645841e-50 | -8.615850e-47 |
| Msa0061970 | Msa1435750 | 0.841138 | 5.697277e-58 | -8.615850e-47 |
| Msa0064350 | Msa1435750 | 0.858526 | 7.752621e-63 | -8.615850e-47 |
| Msa0064380 | Msa1435750 | 0.812513 | 4.081546e-51 | -8.615850e-47 |
| Msa0076000 | Msa1435750 | 0.815214 | 1.036787e-51 | -8.615850e-47 |
| Msa0082280 | Msa1435750 | 0.833305 | 5.757504e-56 | -8.615850e-47 |
| Msa0094010 | Msa1435750 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
| Msa0094920 | Msa1435750 | 0.815128 | 1.083353e-51 | -8.615850e-47 |
| Msa0094950 | Msa1435750 | 0.812432 | 4.251299e-51 | -8.615850e-47 |
| Msa0099190 | Msa1435750 | 0.817372 | 3.411592e-52 | -8.615850e-47 |
| Msa0101180 | Msa1435750 | 0.806114 | 9.625101e-50 | -8.615850e-47 |
| Msa0115390 | Msa1435750 | 0.822565 | 2.212939e-53 | -8.615850e-47 |
| Msa0120540 | Msa1435750 | 0.811152 | 8.076454e-51 | -8.615850e-47 |
| Msa1344850 | Msa1435750 | 0.822120 | 2.806885e-53 | -8.615850e-47 |
| Msa1345450 | Msa1435750 | 0.834777 | 2.463527e-56 | -8.615850e-47 |
| Msa1364910 | Msa1435750 | 0.936035 | 3.302005e-97 | -8.615850e-47 |
| Msa1365150 | Msa1435750 | 0.842576 | 2.377084e-58 | -8.615850e-47 |
| Msa1365860 | Msa1435750 | 0.804958 | 1.682438e-49 | -8.615850e-47 |
| Msa1367360 | Msa1435750 | 0.823592 | 1.275098e-53 | -8.615850e-47 |
| Msa1367880 | Msa1435750 | 0.828957 | 6.733409e-55 | -8.615850e-47 |
| Msa1370860 | Msa1435750 | 0.842564 | 2.394120e-58 | -8.615850e-47 |
| Msa1385070 | Msa1435750 | 0.800681 | 1.285780e-48 | -8.615850e-47 |
| Msa1393740 | Msa1435750 | 0.869683 | 2.577113e-66 | -8.615850e-47 |
| Msa1397050 | Msa1435750 | 0.801990 | 6.937873e-49 | -8.615850e-47 |
| Msa1397810 | Msa1435750 | 0.837279 | 5.707305e-57 | -8.615850e-47 |
| Msa1397940 | Msa1435750 | 0.818885 | 1.551585e-52 | -8.615850e-47 |
| Msa1404010 | Msa1435750 | 0.805134 | 1.545859e-49 | -8.615850e-47 |
| Msa1404190 | Msa1435750 | 0.841627 | 4.236745e-58 | -8.615850e-47 |
| Msa1408790 | Msa1435750 | 0.805555 | 1.261574e-49 | -8.615850e-47 |
| Msa1423910 | Msa1435750 | 0.829493 | 4.990299e-55 | -8.615850e-47 |
| Msa1431040 | Msa1435750 | 0.811814 | 5.798286e-51 | -8.615850e-47 |
| Msa1435750 | Msa1438640 | 0.828654 | 7.970327e-55 | -8.615850e-47 |
| Msa1435750 | Msa1442850 | 0.845759 | 3.323662e-59 | -8.615850e-47 |
| Msa1435750 | Msa1443100 | 0.813816 | 2.113697e-51 | -8.615850e-47 |
| Msa1435750 | Msa1452470 | 0.820925 | 5.299992e-53 | -8.615850e-47 |
| Msa1435750 | Msa1465080 | 0.846821 | 1.706956e-59 | -8.615850e-47 |
| Msa0607510 | Msa1435750 | 0.803447 | 3.471654e-49 | -8.615850e-47 |
| Msa0610390 | Msa1435750 | 0.810394 | 1.177872e-50 | -8.615850e-47 |
| Msa0616020 | Msa1435750 | 0.802776 | 4.778477e-49 | -8.615850e-47 |
| Msa0623700 | Msa1435750 | 0.838216 | 3.279807e-57 | -8.615850e-47 |
| Msa0627910 | Msa1435750 | 0.848492 | 5.921761e-60 | -8.615850e-47 |
| Msa0639120 | Msa1435750 | 0.805413 | 1.351319e-49 | -8.615850e-47 |
| Msa0647490 | Msa1435750 | 0.821390 | 4.141628e-53 | -8.615850e-47 |
| Msa0650920 | Msa1435750 | 0.816183 | 6.306278e-52 | -8.615850e-47 |
| Msa0663900 | Msa1435750 | 0.822224 | 2.655591e-53 | -8.615850e-47 |
| Msa0664960 | Msa1435750 | 0.808421 | 3.122300e-50 | -8.615850e-47 |
| Msa0673470 | Msa1435750 | 0.814517 | 1.479998e-51 | -8.615850e-47 |
| Msa0680240 | Msa1435750 | 0.851382 | 9.207060e-61 | -8.615850e-47 |
| Msa0682780 | Msa1435750 | 0.820208 | 7.742989e-53 | -8.615850e-47 |
| Msa0687630 | Msa1435750 | 0.860625 | 1.813273e-63 | -8.615850e-47 |
| Msa0690160 | Msa1435750 | 0.808920 | 2.442955e-50 | -8.615850e-47 |
| Msa0690550 | Msa1435750 | 0.800606 | 1.331834e-48 | -8.615850e-47 |
| Msa0692110 | Msa1435750 | 0.814900 | 1.217187e-51 | -8.615850e-47 |
| Msa0692840 | Msa1435750 | 0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa0692940 | Msa1435750 | 0.820433 | 6.877440e-53 | -8.615850e-47 |
| Msa0705600 | Msa1435750 | 0.805419 | 1.347377e-49 | -8.615850e-47 |
| Msa0706960 | Msa1435750 | 0.819196 | 1.318517e-52 | -8.615850e-47 |
| Msa0707390 | Msa1435750 | 0.824327 | 8.570826e-54 | -8.615850e-47 |
| Msa0713460 | Msa1435750 | 0.811653 | 6.286005e-51 | -8.615850e-47 |
| Msa0713820 | Msa1435750 | 0.845839 | 3.162087e-59 | -8.615850e-47 |
| Msa0718740 | Msa1435750 | 0.814819 | 1.268769e-51 | -8.615850e-47 |
| Msa0734120 | Msa1435750 | 0.851204 | 1.033456e-60 | -8.615850e-47 |
| Msa0743260 | Msa1435750 | 0.833245 | 5.957638e-56 | -8.615850e-47 |
| Msa0747700 | Msa1435750 | 0.801943 | 7.093150e-49 | -8.615850e-47 |
| Msa0755340 | Msa1435750 | 0.819792 | 9.642370e-53 | -8.615850e-47 |
| Msa0756060 | Msa1435750 | 0.822797 | 1.954565e-53 | -8.615850e-47 |
| Msa0792090 | Msa1435750 | 0.833063 | 6.613725e-56 | -8.615850e-47 |
| Msa0793720 | Msa1435750 | 0.807046 | 6.121174e-50 | -8.615850e-47 |
| Msa0797120 | Msa1435750 | 0.813843 | 2.084262e-51 | -8.615850e-47 |
| Msa0797750 | Msa1435750 | 0.869581 | 2.782142e-66 | -8.615850e-47 |
| Msa0798720 | Msa1435750 | 0.802130 | 6.492018e-49 | -8.615850e-47 |
| Msa0806920 | Msa1435750 | 0.825692 | 4.079928e-54 | -8.615850e-47 |
| Msa0814320 | Msa1435750 | 0.805954 | 1.039914e-49 | -8.615850e-47 |
| Msa0831870 | Msa1435750 | 0.802889 | 4.528809e-49 | -8.615850e-47 |
| Msa0835280 | Msa1435750 | 0.821719 | 3.477174e-53 | -8.615850e-47 |
| Msa0837660 | Msa1435750 | 0.853987 | 1.660764e-61 | -8.615850e-47 |
| Msa0121820 | Msa1435750 | 0.844574 | 6.948280e-59 | -8.615850e-47 |
| Msa0137820 | Msa1435750 | 0.845666 | 3.522158e-59 | -8.615850e-47 |
| Msa0140110 | Msa1435750 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
| Msa0143080 | Msa1435750 | 0.818448 | 1.949652e-52 | -8.615850e-47 |
| Msa0145950 | Msa1435750 | 0.811167 | 8.015742e-51 | -8.615850e-47 |
| Msa0149000 | Msa1435750 | 0.801670 | 8.071708e-49 | -8.615850e-47 |
| Msa0155430 | Msa1435750 | 0.868050 | 8.704165e-66 | -8.615850e-47 |
| Msa0166750 | Msa1435750 | 0.831716 | 1.425387e-55 | -8.615850e-47 |
| Msa0174770 | Msa1435750 | 0.849740 | 2.662462e-60 | -8.615850e-47 |
| Msa0184020 | Msa1435750 | 0.805765 | 1.139620e-49 | -8.615850e-47 |
| Msa0191050 | Msa1435750 | 0.807671 | 4.510901e-50 | -8.615850e-47 |
| Msa0194480 | Msa1435750 | 0.862466 | 4.968105e-64 | -8.615850e-47 |
| Msa0199690 | Msa1435750 | 0.874532 | 6.275545e-68 | -8.615850e-47 |
| Msa0231880 | Msa1435750 | 0.808649 | 2.791312e-50 | -8.615850e-47 |
| Msa0233350 | Msa1435750 | 0.815857 | 7.455475e-52 | -8.615850e-47 |
| Msa0236270 | Msa1435750 | 0.844501 | 7.270017e-59 | -8.615850e-47 |
| Msa0236980 | Msa1435750 | 0.831514 | 1.598961e-55 | -8.615850e-47 |
| Msa1227690 | Msa1435750 | 0.844688 | 6.476693e-59 | -8.615850e-47 |
| Msa1234980 | Msa1435750 | 0.822695 | 2.064411e-53 | -8.615850e-47 |
| Msa1235630 | Msa1435750 | 0.801799 | 7.593123e-49 | -8.615850e-47 |
| Msa1236960 | Msa1435750 | 0.810809 | 9.581228e-51 | -8.615850e-47 |
| Msa1254710 | Msa1435750 | 0.803240 | 3.831139e-49 | -8.615850e-47 |
| Msa1267260 | Msa1435750 | 0.824443 | 8.049545e-54 | -8.615850e-47 |
| Msa1267840 | Msa1435750 | 0.832266 | 1.042979e-55 | -8.615850e-47 |
| Msa1269300 | Msa1435750 | 0.839420 | 1.601207e-57 | -8.615850e-47 |
| Msa1272460 | Msa1435750 | 0.816891 | 4.376313e-52 | -8.615850e-47 |
| Msa1280560 | Msa1435750 | 0.816654 | 4.946864e-52 | -8.615850e-47 |
| Msa1283170 | Msa1435750 | 0.814121 | 1.810563e-51 | -8.615850e-47 |
| Msa1294840 | Msa1435750 | 0.807235 | 5.580773e-50 | -8.615850e-47 |
| Msa1299360 | Msa1435750 | 0.800659 | 1.299322e-48 | -8.615850e-47 |
| Msa1303160 | Msa1435750 | 0.809035 | 2.308050e-50 | -8.615850e-47 |
| Msa1304820 | Msa1435750 | 0.853912 | 1.746150e-61 | -8.615850e-47 |
| Msa1307950 | Msa1435750 | 0.836597 | 8.525779e-57 | -8.615850e-47 |
| Msa1310690 | Msa1435750 | 0.854441 | 1.228596e-61 | -8.615850e-47 |
| Msa1316830 | Msa1435750 | 0.824565 | 7.534758e-54 | -8.615850e-47 |
| Msa1335940 | Msa1435750 | 0.831460 | 1.648877e-55 | -8.615850e-47 |
| Msa1340020 | Msa1435750 | 0.819037 | 1.432838e-52 | -8.615850e-47 |
| Msa0376690 | Msa1435750 | 0.830844 | 2.336399e-55 | -8.615850e-47 |
| Msa0380040 | Msa1435750 | 0.852000 | 6.150350e-61 | -8.615850e-47 |
| Msa0384880 | Msa1435750 | 0.807580 | 4.715404e-50 | -8.615850e-47 |
| Msa0392940 | Msa1435750 | 0.830391 | 3.014693e-55 | -8.615850e-47 |
| Msa0393950 | Msa1435750 | 0.802951 | 4.397017e-49 | -8.615850e-47 |
| Msa0394400 | Msa1435750 | 0.838425 | 2.898521e-57 | -8.615850e-47 |
| Msa0402330 | Msa1435750 | 0.848103 | 7.584532e-60 | -8.615850e-47 |
| Msa0403190 | Msa1435750 | 0.832735 | 7.976813e-56 | -8.615850e-47 |
| Msa0415430 | Msa1435750 | 0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0416400 | Msa1435750 | 0.831388 | 1.717537e-55 | -8.615850e-47 |
| Msa0426330 | Msa1435750 | 0.814749 | 1.314517e-51 | -8.615850e-47 |
| Msa0429290 | Msa1435750 | 0.865199 | 7.021215e-65 | -8.615850e-47 |
| Msa0429950 | Msa1435750 | 0.804274 | 2.336872e-49 | -8.615850e-47 |
| Msa0437690 | Msa1435750 | -0.803166 | 3.969149e-49 | -8.615850e-47 |
| Msa0445020 | Msa1435750 | 0.802006 | 6.884241e-49 | -8.615850e-47 |
| Msa0449820 | Msa1435750 | 0.826613 | 2.464169e-54 | -8.615850e-47 |
| Msa0449830 | Msa1435750 | 0.803502 | 3.381643e-49 | -8.615850e-47 |
| Msa0471590 | Msa1435750 | 0.849242 | 3.667305e-60 | -8.615850e-47 |
| Msa0475580 | Msa1435750 | 0.854108 | 1.532657e-61 | -8.615850e-47 |
| Msa0481480 | Msa1435750 | 0.833711 | 4.557450e-56 | -8.615850e-47 |
| Msa0481810 | Msa1435750 | 0.816347 | 5.794725e-52 | -8.615850e-47 |
| Msa0993530 | Msa1435750 | 0.801688 | 7.999993e-49 | -8.615850e-47 |
| Msa1026790 | Msa1435750 | 0.800701 | 1.273817e-48 | -8.615850e-47 |
| Msa1040890 | Msa1435750 | 0.804076 | 2.569141e-49 | -8.615850e-47 |
| Msa1073400 | Msa1435750 | 0.809365 | 1.961835e-50 | -8.615850e-47 |
| Msa1081000 | Msa1435750 | 0.814799 | 1.281427e-51 | -8.615850e-47 |
| Msa1082700 | Msa1435750 | 0.809413 | 1.915992e-50 | -8.615850e-47 |
| Msa1089840 | Msa1435750 | 0.836820 | 7.479985e-57 | -8.615850e-47 |
| Msa1092820 | Msa1435750 | 0.804052 | 2.598754e-49 | -8.615850e-47 |
| Msa0242230 | Msa1435750 | 0.812380 | 4.364812e-51 | -8.615850e-47 |
| Msa0244270 | Msa1435750 | 0.801095 | 1.058202e-48 | -8.615850e-47 |
| Msa0260210 | Msa1435750 | 0.806944 | 6.431155e-50 | -8.615850e-47 |
| Msa0260240 | Msa1435750 | 0.816680 | 4.881706e-52 | -8.615850e-47 |
| Msa0260280 | Msa1435750 | 0.819036 | 1.433784e-52 | -8.615850e-47 |
| Msa0280430 | Msa1435750 | 0.851145 | 1.073992e-60 | -8.615850e-47 |
| Msa0291520 | Msa1435750 | 0.838084 | 3.547272e-57 | -8.615850e-47 |
| Msa0304260 | Msa1435750 | 0.811589 | 6.491432e-51 | -8.615850e-47 |
| Msa0304290 | Msa1435750 | 0.815371 | 9.566467e-52 | -8.615850e-47 |
| Msa0304300 | Msa1435750 | 0.806775 | 6.981772e-50 | -8.615850e-47 |
| Msa0304330 | Msa1435750 | 0.815047 | 1.128925e-51 | -8.615850e-47 |
| Msa0304590 | Msa1435750 | 0.823584 | 1.280301e-53 | -8.615850e-47 |
| Msa0304660 | Msa1435750 | 0.817346 | 3.458684e-52 | -8.615850e-47 |
| Msa0310830 | Msa1435750 | 0.804428 | 2.170497e-49 | -8.615850e-47 |
| Msa0311700 | Msa1435750 | 0.802215 | 6.236122e-49 | -8.615850e-47 |
| Msa0320430 | Msa1435750 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0323560 | Msa1435750 | 0.817048 | 4.036794e-52 | -8.615850e-47 |
| Msa0328210 | Msa1435750 | 0.837368 | 5.417429e-57 | -8.615850e-47 |
| Msa0331700 | Msa1435750 | 0.816769 | 4.661442e-52 | -8.615850e-47 |
| Msa0341890 | Msa1435750 | 0.801986 | 6.950289e-49 | -8.615850e-47 |
| Msa0347680 | Msa1435750 | 0.805475 | 1.311384e-49 | -8.615850e-47 |
| Msa0355270 | Msa1435750 | 0.842927 | 1.917584e-58 | -8.615850e-47 |
| Msa1109570 | Msa1435750 | 0.852632 | 4.063731e-61 | -8.615850e-47 |
| Msa1126510 | Msa1435750 | 0.820193 | 7.805767e-53 | -8.615850e-47 |
| Msa1126770 | Msa1435750 | 0.844448 | 7.513843e-59 | -8.615850e-47 |
| Msa1127830 | Msa1435750 | 0.810495 | 1.120693e-50 | -8.615850e-47 |
| Msa1134110 | Msa1435750 | 0.801261 | 9.785459e-49 | -8.615850e-47 |
| Msa1138870 | Msa1435750 | 0.828354 | 9.420756e-55 | -8.615850e-47 |
| Msa1143840 | Msa1435750 | 0.806344 | 8.611454e-50 | -8.615850e-47 |
| Msa1166010 | Msa1435750 | 0.803588 | 3.245563e-49 | -8.615850e-47 |
| Msa1166860 | Msa1435750 | 0.814015 | 1.909974e-51 | -8.615850e-47 |
| Msa1166870 | Msa1435750 | 0.814007 | 1.918203e-51 | -8.615850e-47 |
| Msa1175330 | Msa1435750 | 0.807998 | 3.843217e-50 | -8.615850e-47 |
| Msa1182610 | Msa1435750 | 0.829433 | 5.161978e-55 | -8.615850e-47 |
| Msa1184370 | Msa1435750 | 0.851206 | 1.032008e-60 | -8.615850e-47 |
| Msa1201830 | Msa1435750 | 0.803608 | 3.214326e-49 | -8.615850e-47 |
| Msa1207730 | Msa1435750 | 0.801656 | 8.123733e-49 | -8.615850e-47 |
| Msa1210810 | Msa1435750 | 0.805159 | 1.526808e-49 | -8.615850e-47 |
| Msa0485850 | Msa1435750 | 0.826860 | 2.151472e-54 | -8.615850e-47 |
| Msa0505150 | Msa1435750 | 0.805068 | 1.595695e-49 | -8.615850e-47 |
| Msa0508590 | Msa1435750 | 0.827318 | 1.671235e-54 | -8.615850e-47 |
| Msa0508630 | Msa1435750 | 0.819943 | 8.905455e-53 | -8.615850e-47 |
| Msa0509950 | Msa1435750 | -0.801279 | 9.704479e-49 | -8.615850e-47 |
| Msa0513440 | Msa1435750 | 0.809294 | 2.031375e-50 | -8.615850e-47 |
| Msa0519220 | Msa1435750 | 0.860776 | 1.631611e-63 | -8.615850e-47 |
| Msa0524180 | Msa1435750 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0552810 | Msa1435750 | 0.836763 | 7.734842e-57 | -8.615850e-47 |
| Msa0581070 | Msa1435750 | 0.832106 | 1.141881e-55 | -8.615850e-47 |
| Msa0585900 | Msa1435750 | 0.811537 | 6.661377e-51 | -8.615850e-47 |
| Msa0585960 | Msa1435750 | 0.802457 | 5.558472e-49 | -8.615850e-47 |
| Msa0590650 | Msa1435750 | 0.807935 | 3.963092e-50 | -8.615850e-47 |
| Msa0591540 | Msa1435750 | 0.804708 | 1.897027e-49 | -8.615850e-47 |
| Msa0591770 | Msa1435750 | 0.804389 | 2.211601e-49 | -8.615850e-47 |
| Msa0594910 | Msa1435750 | 0.835118 | 2.021282e-56 | -8.615850e-47 |
| Msa0844060 | Msa1435750 | 0.803934 | 2.749958e-49 | -8.615850e-47 |
| Msa0847080 | Msa1435750 | 0.810484 | 1.126806e-50 | -8.615850e-47 |
| Msa0863450 | Msa1435750 | 0.810046 | 1.400293e-50 | -8.615850e-47 |
| Msa0869120 | Msa1435750 | 0.814085 | 1.843648e-51 | -8.615850e-47 |
| Msa0874500 | Msa1435750 | 0.808931 | 2.430179e-50 | -8.615850e-47 |
| Msa0900630 | Msa1435750 | 0.821258 | 4.443743e-53 | -8.615850e-47 |
| Msa0926460 | Msa1435750 | 0.805387 | 1.368101e-49 | -8.615850e-47 |
| Msa0931950 | Msa1435750 | 0.800916 | 1.151281e-48 | -8.615850e-47 |
| Msa0933290 | Msa1435750 | 0.836020 | 1.194806e-56 | -8.615850e-47 |
| Msa0939790 | Msa1435750 | 0.831084 | 2.039794e-55 | -8.615850e-47 |
| Msa0943170 | Msa1435750 | 0.800307 | 1.532648e-48 | -8.615850e-47 |
| Msa0947800 | Msa1435750 | 0.815262 | 1.011840e-51 | -8.615850e-47 |
| Msa0965860 | Msa1435750 | 0.801181 | 1.016243e-48 | -8.615850e-47 |
| Msa0966270 | Msa1435750 | 0.815702 | 8.072585e-52 | -8.615850e-47 |
| Msa0967370 | Msa1435750 | 0.818476 | 1.921922e-52 | -8.615850e-47 |
| Msa0974810 | Msa1435750 | 0.824182 | 9.273367e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435750 | MtrunA17_Chr3g0138901 | 100.000 | 142 | 0 | 0 | 1 | 142 | 1 | 142 | 2.28e-106 | 299 |
| Msa1435750 | MtrunA17_Chr1g0168831 | 99.296 | 142 | 1 | 0 | 1 | 142 | 1 | 142 | 6.62e-106 | 298 |
| Msa1435750 | MtrunA17_Chr1g0190691 | 37.956 | 137 | 79 | 3 | 1 | 133 | 1 | 135 | 2.04e-27 | 99.4 |
| Msa1435750 | MtrunA17_Chr7g0245801 | 37.226 | 137 | 80 | 3 | 1 | 133 | 1 | 135 | 2.99e-26 | 96.7 |
| Msa1435750 | MtrunA17_Chr4g0038341 | 60.526 | 76 | 21 | 1 | 1 | 76 | 1 | 67 | 7.72e-25 | 90.5 |
| Msa1435750 | MtrunA17_Chr1g0175531 | 70.732 | 41 | 11 | 1 | 102 | 141 | 2 | 42 | 8.22e-15 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435750 | AT5G08290.1 | 97.183 | 142 | 4 | 0 | 1 | 142 | 1 | 142 | 1.93e-104 | 294 |
| Msa1435750 | AT5G08290.2 | 98.039 | 102 | 2 | 0 | 41 | 142 | 1 | 102 | 1.78e-71 | 209 |
| Msa1435750 | AT3G24730.1 | 36.496 | 137 | 81 | 3 | 1 | 133 | 9 | 143 | 1.96e-24 | 92.4 |
Find 62 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACAGTTATGTTCTTCTTT+AGG | 0.229575 | tig0027766:-52319 | Msa1435750:CDS |
| GTACCAAATGAGGTAGATTT+TGG | 0.235671 | tig0027766:+52061 | None:intergenic |
| CGTCTCGTTGTCATCCGTTT+TGG | 0.320244 | tig0027766:-53210 | Msa1435750:CDS |
| CATAAAACATAAATCTTTGT+TGG | 0.327339 | tig0027766:+51920 | None:intergenic |
| GTACTTGGTGGAGTAATCTT+TGG | 0.329915 | tig0027766:+52157 | None:intergenic |
| GACAGTTACACACTTGATAA+AGG | 0.331693 | tig0027766:+52036 | None:intergenic |
| GAAACAACAACAAGATCAAT+TGG | 0.342414 | tig0027766:-52265 | Msa1435750:CDS |
| TGTCCAAAATCTACCTCATT+TGG | 0.347328 | tig0027766:-52064 | Msa1435750:three_prime_UTR |
| GCCTCACTTGCATTCGGGAT+GGG | 0.362710 | tig0027766:-53265 | Msa1435750:CDS |
| CATGCTGCCTCACTTGCATT+CGG | 0.374586 | tig0027766:-53271 | Msa1435750:CDS |
| TTCGGGATGGGCTGTTGATC+AGG | 0.384531 | tig0027766:-53253 | Msa1435750:CDS |
| GTGTGGAGACAAAGTGAAAA+AGG | 0.390098 | tig0027766:+53391 | None:intergenic |
| TACTTGGTGGAGTAATCTTT+GGG | 0.403435 | tig0027766:+52158 | None:intergenic |
| ACCCTAATTAAGAAAAGAAA+AGG | 0.408185 | tig0027766:-53324 | Msa1435750:five_prime_UTR |
| AAGTGTTTGATTAAAAGAAA+TGG | 0.421926 | tig0027766:-51893 | Msa1435750:three_prime_UTR |
| TGTTATTGTTGTTGAATTGA+AGG | 0.430898 | tig0027766:-53352 | Msa1435750:five_prime_UTR |
| TTGGGCTATGAAGGACAAAC+AGG | 0.451623 | tig0027766:-52246 | Msa1435750:CDS |
| CAAGATCAATTGGGCTATGA+AGG | 0.451707 | tig0027766:-52255 | Msa1435750:CDS |
| AATGGTAGGAAATGTTTGTC+AGG | 0.454698 | tig0027766:-51875 | None:intergenic |
| TACATTCTAGTAACGGTACT+TGG | 0.457670 | tig0027766:+52142 | None:intergenic |
| TGCCTCACTTGCATTCGGGA+TGG | 0.468994 | tig0027766:-53266 | Msa1435750:CDS |
| TGTTGTTGTTTCCAGTTCCA+AGG | 0.469561 | tig0027766:+52276 | None:intergenic |
| ACAGTTACACACTTGATAAA+GGG | 0.481529 | tig0027766:+52037 | None:intergenic |
| GTGTATGCCCAACATGTACT+TGG | 0.485312 | tig0027766:-51952 | Msa1435750:three_prime_UTR |
| ATCATGATAGACCTTGGAAC+TGG | 0.486256 | tig0027766:-52287 | Msa1435750:CDS |
| ATGCTGCCTCACTTGCATTC+GGG | 0.490375 | tig0027766:-53270 | Msa1435750:CDS |
| CCCTAATTAAGAAAAGAAAA+GGG | 0.493267 | tig0027766:-53323 | Msa1435750:five_prime_UTR |
| CACATAATCCAAGTACATGT+TGG | 0.495823 | tig0027766:+51944 | None:intergenic |
| ACTAGAATGTATCAATCTAC+AGG | 0.497165 | tig0027766:-52130 | Msa1435750:exon |
| ACATAATCCAAGTACATGTT+GGG | 0.503365 | tig0027766:+51945 | None:intergenic |
| AAACAACAACAAGATCAATT+GGG | 0.514098 | tig0027766:-52264 | Msa1435750:CDS |
| TCATACATAGTGTTAAAGTC+AGG | 0.525607 | tig0027766:+52356 | None:intergenic |
| AAGAAGAACATAACTGTGGA+AGG | 0.528366 | tig0027766:+52323 | None:intergenic |
| TCTACAGAGGTGCAAGGAAG+GGG | 0.542753 | tig0027766:-52199 | Msa1435750:CDS |
| CATCCCAATCGTGACCAAAA+CGG | 0.547656 | tig0027766:+53196 | None:intergenic |
| TGTCTACAGAGGTGCAAGGA+AGG | 0.552161 | tig0027766:-52201 | Msa1435750:CDS |
| GTCTACAGAGGTGCAAGGAA+GGG | 0.554185 | tig0027766:-52200 | Msa1435750:CDS |
| GATAAAGGGTGTACCAAATG+AGG | 0.558599 | tig0027766:+52051 | None:intergenic |
| TATTGTTGTTGAATTGAAGG+TGG | 0.561696 | tig0027766:-53349 | Msa1435750:five_prime_UTR |
| AAGCACATCATGATAGACCT+TGG | 0.567283 | tig0027766:-52293 | Msa1435750:CDS |
| ATTCTAGTAACGGTACTTGG+TGG | 0.586412 | tig0027766:+52145 | None:intergenic |
| GTTTGATTAAAAGAAATGGT+AGG | 0.587843 | tig0027766:-51889 | Msa1435750:three_prime_UTR |
| TTGGGATGAGACTTGTATGC+AGG | 0.595858 | tig0027766:-53181 | Msa1435750:intron |
| TCAGGCAATCCTCGCTGAGG+AGG | 0.599877 | tig0027766:-53235 | Msa1435750:CDS |
| AGAGGTGCAAGGAAGGGGCG+TGG | 0.611606 | tig0027766:-52194 | Msa1435750:CDS |
| GTTTAAGATGACATACAAGT+AGG | 0.612858 | tig0027766:+51992 | None:intergenic |
| GCCCATCCCGAATGCAAGTG+AGG | 0.615016 | tig0027766:+53264 | None:intergenic |
| CCTAATTAAGAAAAGAAAAG+GGG | 0.617397 | tig0027766:-53322 | Msa1435750:five_prime_UTR |
| GATGGATGAGGTGCTGTCAT+CGG | 0.623483 | tig0027766:-52435 | Msa1435750:CDS |
| GGTGTGTGTCAAGATGGATG+AGG | 0.631234 | tig0027766:-52447 | Msa1435750:intron |
| AGAAGAACATAACTGTGGAA+GGG | 0.633856 | tig0027766:+52324 | None:intergenic |
| GCACCTCTGTGATGTCCACA+AGG | 0.642857 | tig0027766:+52378 | None:intergenic |
| TCACTTTGTCTCCACACTCG+CGG | 0.651115 | tig0027766:-53385 | Msa1435750:five_prime_UTR |
| GAATGTATCAATCTACAGGA+AGG | 0.651779 | tig0027766:-52126 | Msa1435750:three_prime_UTR |
| CTTTGCTGTGATATACCTTG+TGG | 0.662344 | tig0027766:-52393 | Msa1435750:CDS |
| AGATTGATACATTCTAGTAA+CGG | 0.666479 | tig0027766:+52135 | None:intergenic |
| CCTAAAGAAGAACATAACTG+TGG | 0.685302 | tig0027766:+52319 | None:intergenic |
| TGATCAGGCAATCCTCGCTG+AGG | 0.692917 | tig0027766:-53238 | Msa1435750:CDS |
| AGACTGTCTACAGAGGTGCA+AGG | 0.715363 | tig0027766:-52205 | Msa1435750:CDS |
| ATCATTGAGACTGTCTACAG+AGG | 0.717834 | tig0027766:-52212 | Msa1435750:CDS |
| CGAGACGTTCCTCCTCAGCG+AGG | 0.755149 | tig0027766:+53226 | None:intergenic |
| ATACCTTGTGGACATCACAG+AGG | 0.789529 | tig0027766:-52381 | Msa1435750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGCTTTTTTTTTTTTTTTT+TGG | - | tig0027766:52833-52852 | Msa1435750:intron | 10.0% |
| !!! | TTGCTTTTTTTTTTTTTTTT+TGG | - | tig0027766:52833-52852 | Msa1435750:intron | 10.0% |
| !! | TTATGTCCTATATATATTAT+TGG | + | tig0027766:52382-52401 | None:intergenic | 15.0% |
| !! | TTATGTCCTATATATATTAT+TGG | + | tig0027766:52382-52401 | None:intergenic | 15.0% |
| !! | AAACAGCCAATAATATATAT+AGG | - | tig0027766:52373-52392 | Msa1435750:CDS | 20.0% |
| !! | AGAGATAAAGTAATGAATTT+AGG | - | tig0027766:52403-52422 | Msa1435750:CDS | 20.0% |
| !! | GAGATAAAGTAATGAATTTA+GGG | - | tig0027766:52404-52423 | Msa1435750:CDS | 20.0% |
| !! | ATCAACCTAAAATTAAGAAT+TGG | + | tig0027766:52761-52780 | None:intergenic | 20.0% |
| !!! | TTCTTAATTTTAGGTTGATA+AGG | - | tig0027766:52762-52781 | Msa1435750:intron | 20.0% |
| !!! | TCTTAATTTTAGGTTGATAA+GGG | - | tig0027766:52763-52782 | Msa1435750:intron | 20.0% |
| !! | CATAAAACATAAATCTTTGT+TGG | + | tig0027766:53384-53403 | None:intergenic | 20.0% |
| !! | AAGTGTTTGATTAAAAGAAA+TGG | - | tig0027766:53408-53427 | Msa1435750:five_prime_UTR | 20.0% |
| !! | AAACAGCCAATAATATATAT+AGG | - | tig0027766:52373-52392 | Msa1435750:CDS | 20.0% |
| !! | AGAGATAAAGTAATGAATTT+AGG | - | tig0027766:52403-52422 | Msa1435750:CDS | 20.0% |
| !! | GAGATAAAGTAATGAATTTA+GGG | - | tig0027766:52404-52423 | Msa1435750:CDS | 20.0% |
| !! | ATCAACCTAAAATTAAGAAT+TGG | + | tig0027766:52761-52780 | None:intergenic | 20.0% |
| !!! | TTCTTAATTTTAGGTTGATA+AGG | - | tig0027766:52762-52781 | Msa1435750:intron | 20.0% |
| !!! | TCTTAATTTTAGGTTGATAA+GGG | - | tig0027766:52763-52782 | Msa1435750:intron | 20.0% |
| !! | CATAAAACATAAATCTTTGT+TGG | + | tig0027766:53384-53403 | None:intergenic | 20.0% |
| !! | AAGTGTTTGATTAAAAGAAA+TGG | - | tig0027766:53408-53427 | Msa1435750:five_prime_UTR | 20.0% |
| !! | TGTTATTGTTGTTGAATTGA+AGG | - | tig0027766:51949-51968 | Msa1435750:three_prime_UTR | 25.0% |
| ! | ACCCTAATTAAGAAAAGAAA+AGG | - | tig0027766:51977-51996 | Msa1435750:three_prime_UTR | 25.0% |
| !! | CCCTTTTCTTTTCTTAATTA+GGG | + | tig0027766:51981-52000 | None:intergenic | 25.0% |
| ! | CCCTAATTAAGAAAAGAAAA+GGG | - | tig0027766:51978-51997 | Msa1435750:three_prime_UTR | 25.0% |
| ! | CCTAATTAAGAAAAGAAAAG+GGG | - | tig0027766:51979-51998 | Msa1435750:three_prime_UTR | 25.0% |
| ! | AAATATCAAGAACTGCTTAA+TGG | - | tig0027766:52210-52229 | Msa1435750:CDS | 25.0% |
| ! | ATAAAGTAATGAATTTAGGG+AGG | - | tig0027766:52407-52426 | Msa1435750:CDS | 25.0% |
| ! | GCATGAAACAAATTTGAATT+TGG | + | tig0027766:52452-52471 | None:intergenic | 25.0% |
| !! | ATGCACCAATTCTTAATTTT+AGG | - | tig0027766:52753-52772 | Msa1435750:intron | 25.0% |
| ! | AAACAACAACAAGATCAATT+GGG | - | tig0027766:53037-53056 | Msa1435750:intron | 25.0% |
| ! | AGATTGATACATTCTAGTAA+CGG | + | tig0027766:53169-53188 | None:intergenic | 25.0% |
| ! | GTTTGATTAAAAGAAATGGT+AGG | - | tig0027766:53412-53431 | Msa1435750:five_prime_UTR | 25.0% |
| !! | TGTTATTGTTGTTGAATTGA+AGG | - | tig0027766:51949-51968 | Msa1435750:three_prime_UTR | 25.0% |
| ! | ACCCTAATTAAGAAAAGAAA+AGG | - | tig0027766:51977-51996 | Msa1435750:three_prime_UTR | 25.0% |
| !! | CCCTTTTCTTTTCTTAATTA+GGG | + | tig0027766:51981-52000 | None:intergenic | 25.0% |
| ! | CCCTAATTAAGAAAAGAAAA+GGG | - | tig0027766:51978-51997 | Msa1435750:three_prime_UTR | 25.0% |
| ! | CCTAATTAAGAAAAGAAAAG+GGG | - | tig0027766:51979-51998 | Msa1435750:three_prime_UTR | 25.0% |
| ! | AAATATCAAGAACTGCTTAA+TGG | - | tig0027766:52210-52229 | Msa1435750:CDS | 25.0% |
| ! | ATAAAGTAATGAATTTAGGG+AGG | - | tig0027766:52407-52426 | Msa1435750:CDS | 25.0% |
| ! | GCATGAAACAAATTTGAATT+TGG | + | tig0027766:52452-52471 | None:intergenic | 25.0% |
| !! | ATGCACCAATTCTTAATTTT+AGG | - | tig0027766:52753-52772 | Msa1435750:intron | 25.0% |
| ! | AAACAACAACAAGATCAATT+GGG | - | tig0027766:53037-53056 | Msa1435750:intron | 25.0% |
| ! | AGATTGATACATTCTAGTAA+CGG | + | tig0027766:53169-53188 | None:intergenic | 25.0% |
| ! | GTTTGATTAAAAGAAATGGT+AGG | - | tig0027766:53412-53431 | Msa1435750:five_prime_UTR | 25.0% |
| ! | TATTGTTGTTGAATTGAAGG+TGG | - | tig0027766:51952-51971 | Msa1435750:three_prime_UTR | 30.0% |
| ! | CCCCTTTTCTTTTCTTAATT+AGG | + | tig0027766:51982-52001 | None:intergenic | 30.0% |
| GATGACAAAACTGCTTAATT+TGG | - | tig0027766:52239-52258 | Msa1435750:CDS | 30.0% | |
| GAACTATATTTGGGAAATAC+TGG | + | tig0027766:52500-52519 | None:intergenic | 30.0% | |
| TGATGTATTTACAGAGAAAC+AGG | + | tig0027766:52546-52565 | None:intergenic | 30.0% | |
| ! | CCATGAAATTGTTATTGTGA+TGG | + | tig0027766:52656-52675 | None:intergenic | 30.0% |
| CCATCACAATAACAATTTCA+TGG | - | tig0027766:52653-52672 | Msa1435750:intron | 30.0% | |
| TGAGCGAAACTTGATTAATT+AGG | - | tig0027766:52792-52811 | Msa1435750:intron | 30.0% | |
| TCATACATAGTGTTAAAGTC+AGG | + | tig0027766:52948-52967 | None:intergenic | 30.0% | |
| GAAACAACAACAAGATCAAT+TGG | - | tig0027766:53036-53055 | Msa1435750:intron | 30.0% | |
| ACTAGAATGTATCAATCTAC+AGG | - | tig0027766:53171-53190 | Msa1435750:intron | 30.0% | |
| ACAGTTACACACTTGATAAA+GGG | + | tig0027766:53267-53286 | None:intergenic | 30.0% | |
| ! | GTTTAAGATGACATACAAGT+AGG | + | tig0027766:53312-53331 | None:intergenic | 30.0% |
| ACATAATCCAAGTACATGTT+GGG | + | tig0027766:53359-53378 | None:intergenic | 30.0% | |
| ! | TATTGTTGTTGAATTGAAGG+TGG | - | tig0027766:51952-51971 | Msa1435750:three_prime_UTR | 30.0% |
| ! | CCCCTTTTCTTTTCTTAATT+AGG | + | tig0027766:51982-52001 | None:intergenic | 30.0% |
| GATGACAAAACTGCTTAATT+TGG | - | tig0027766:52239-52258 | Msa1435750:CDS | 30.0% | |
| GAACTATATTTGGGAAATAC+TGG | + | tig0027766:52500-52519 | None:intergenic | 30.0% | |
| TGATGTATTTACAGAGAAAC+AGG | + | tig0027766:52546-52565 | None:intergenic | 30.0% | |
| ! | CCATGAAATTGTTATTGTGA+TGG | + | tig0027766:52656-52675 | None:intergenic | 30.0% |
| CCATCACAATAACAATTTCA+TGG | - | tig0027766:52653-52672 | Msa1435750:intron | 30.0% | |
| TGAGCGAAACTTGATTAATT+AGG | - | tig0027766:52792-52811 | Msa1435750:intron | 30.0% | |
| TCATACATAGTGTTAAAGTC+AGG | + | tig0027766:52948-52967 | None:intergenic | 30.0% | |
| GAAACAACAACAAGATCAAT+TGG | - | tig0027766:53036-53055 | Msa1435750:intron | 30.0% | |
| ACTAGAATGTATCAATCTAC+AGG | - | tig0027766:53171-53190 | Msa1435750:intron | 30.0% | |
| ACAGTTACACACTTGATAAA+GGG | + | tig0027766:53267-53286 | None:intergenic | 30.0% | |
| ! | GTTTAAGATGACATACAAGT+AGG | + | tig0027766:53312-53331 | None:intergenic | 30.0% |
| ACATAATCCAAGTACATGTT+GGG | + | tig0027766:53359-53378 | None:intergenic | 30.0% | |
| TATCAAGAACTGCTTAATGG+AGG | - | tig0027766:52213-52232 | Msa1435750:CDS | 35.0% | |
| AAGTAATGAATTTAGGGAGG+TGG | - | tig0027766:52410-52429 | Msa1435750:CDS | 35.0% | |
| GAGAAGCAGGAACTATATTT+GGG | + | tig0027766:52509-52528 | None:intergenic | 35.0% | |
| TGAGAAGCAGGAACTATATT+TGG | + | tig0027766:52510-52529 | None:intergenic | 35.0% | |
| TTCAGAAAAAGTTGAGAAGC+AGG | + | tig0027766:52522-52541 | None:intergenic | 35.0% | |
| TATCATAATACCAATCGCAG+TGG | + | tig0027766:52704-52723 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGTGTGTGTCAAGA+TGG | - | tig0027766:52848-52867 | Msa1435750:intron | 35.0% |
| AGAAGAACATAACTGTGGAA+GGG | + | tig0027766:52980-52999 | None:intergenic | 35.0% | |
| AAGAAGAACATAACTGTGGA+AGG | + | tig0027766:52981-53000 | None:intergenic | 35.0% | |
| CCTAAAGAAGAACATAACTG+TGG | + | tig0027766:52985-53004 | None:intergenic | 35.0% | |
| CCACAGTTATGTTCTTCTTT+AGG | - | tig0027766:52982-53001 | Msa1435750:intron | 35.0% | |
| ! | TACTTGGTGGAGTAATCTTT+GGG | + | tig0027766:53146-53165 | None:intergenic | 35.0% |
| TACATTCTAGTAACGGTACT+TGG | + | tig0027766:53162-53181 | None:intergenic | 35.0% | |
| GAATGTATCAATCTACAGGA+AGG | - | tig0027766:53175-53194 | Msa1435750:intron | 35.0% | |
| TGTCCAAAATCTACCTCATT+TGG | - | tig0027766:53237-53256 | Msa1435750:CDS | 35.0% | |
| ! | GTACCAAATGAGGTAGATTT+TGG | + | tig0027766:53243-53262 | None:intergenic | 35.0% |
| GACAGTTACACACTTGATAA+AGG | + | tig0027766:53268-53287 | None:intergenic | 35.0% | |
| CACATAATCCAAGTACATGT+TGG | + | tig0027766:53360-53379 | None:intergenic | 35.0% | |
| TATCAAGAACTGCTTAATGG+AGG | - | tig0027766:52213-52232 | Msa1435750:CDS | 35.0% | |
| AAGTAATGAATTTAGGGAGG+TGG | - | tig0027766:52410-52429 | Msa1435750:CDS | 35.0% | |
| GAGAAGCAGGAACTATATTT+GGG | + | tig0027766:52509-52528 | None:intergenic | 35.0% | |
| TGAGAAGCAGGAACTATATT+TGG | + | tig0027766:52510-52529 | None:intergenic | 35.0% | |
| TTCAGAAAAAGTTGAGAAGC+AGG | + | tig0027766:52522-52541 | None:intergenic | 35.0% | |
| TATCATAATACCAATCGCAG+TGG | + | tig0027766:52704-52723 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGTGTGTGTCAAGA+TGG | - | tig0027766:52848-52867 | Msa1435750:intron | 35.0% |
| AGAAGAACATAACTGTGGAA+GGG | + | tig0027766:52980-52999 | None:intergenic | 35.0% | |
| AAGAAGAACATAACTGTGGA+AGG | + | tig0027766:52981-53000 | None:intergenic | 35.0% | |
| CCTAAAGAAGAACATAACTG+TGG | + | tig0027766:52985-53004 | None:intergenic | 35.0% | |
| CCACAGTTATGTTCTTCTTT+AGG | - | tig0027766:52982-53001 | Msa1435750:intron | 35.0% | |
| ! | TACTTGGTGGAGTAATCTTT+GGG | + | tig0027766:53146-53165 | None:intergenic | 35.0% |
| TACATTCTAGTAACGGTACT+TGG | + | tig0027766:53162-53181 | None:intergenic | 35.0% | |
| GAATGTATCAATCTACAGGA+AGG | - | tig0027766:53175-53194 | Msa1435750:intron | 35.0% | |
| TGTCCAAAATCTACCTCATT+TGG | - | tig0027766:53237-53256 | Msa1435750:CDS | 35.0% | |
| ! | GTACCAAATGAGGTAGATTT+TGG | + | tig0027766:53243-53262 | None:intergenic | 35.0% |
| GACAGTTACACACTTGATAA+AGG | + | tig0027766:53268-53287 | None:intergenic | 35.0% | |
| CACATAATCCAAGTACATGT+TGG | + | tig0027766:53360-53379 | None:intergenic | 35.0% | |
| GTGTGGAGACAAAGTGAAAA+AGG | + | tig0027766:51913-51932 | None:intergenic | 40.0% | |
| ! | CTTTGCTGTGATATACCTTG+TGG | - | tig0027766:52908-52927 | Msa1435750:intron | 40.0% |
| AAGCACATCATGATAGACCT+TGG | - | tig0027766:53008-53027 | Msa1435750:intron | 40.0% | |
| ATCATGATAGACCTTGGAAC+TGG | - | tig0027766:53014-53033 | Msa1435750:intron | 40.0% | |
| !! | TGTTGTTGTTTCCAGTTCCA+AGG | + | tig0027766:53028-53047 | None:intergenic | 40.0% |
| CAAGATCAATTGGGCTATGA+AGG | - | tig0027766:53046-53065 | Msa1435750:intron | 40.0% | |
| ATCATTGAGACTGTCTACAG+AGG | - | tig0027766:53089-53108 | Msa1435750:intron | 40.0% | |
| ! | GTACTTGGTGGAGTAATCTT+TGG | + | tig0027766:53147-53166 | None:intergenic | 40.0% |
| ATTCTAGTAACGGTACTTGG+TGG | + | tig0027766:53159-53178 | None:intergenic | 40.0% | |
| ! | GATAAAGGGTGTACCAAATG+AGG | + | tig0027766:53253-53272 | None:intergenic | 40.0% |
| GTGTGGAGACAAAGTGAAAA+AGG | + | tig0027766:51913-51932 | None:intergenic | 40.0% | |
| ! | CTTTGCTGTGATATACCTTG+TGG | - | tig0027766:52908-52927 | Msa1435750:intron | 40.0% |
| AAGCACATCATGATAGACCT+TGG | - | tig0027766:53008-53027 | Msa1435750:intron | 40.0% | |
| ATCATGATAGACCTTGGAAC+TGG | - | tig0027766:53014-53033 | Msa1435750:intron | 40.0% | |
| !! | TGTTGTTGTTTCCAGTTCCA+AGG | + | tig0027766:53028-53047 | None:intergenic | 40.0% |
| CAAGATCAATTGGGCTATGA+AGG | - | tig0027766:53046-53065 | Msa1435750:intron | 40.0% | |
| ATCATTGAGACTGTCTACAG+AGG | - | tig0027766:53089-53108 | Msa1435750:intron | 40.0% | |
| ! | GTACTTGGTGGAGTAATCTT+TGG | + | tig0027766:53147-53166 | None:intergenic | 40.0% |
| ATTCTAGTAACGGTACTTGG+TGG | + | tig0027766:53159-53178 | None:intergenic | 40.0% | |
| ! | GATAAAGGGTGTACCAAATG+AGG | + | tig0027766:53253-53272 | None:intergenic | 40.0% |
| !! | TCATCCGTTTTGGTCACGAT+TGG | - | tig0027766:52101-52120 | Msa1435750:three_prime_UTR | 45.0% |
| !! | CATCCGTTTTGGTCACGATT+GGG | - | tig0027766:52102-52121 | Msa1435750:three_prime_UTR | 45.0% |
| CATCCCAATCGTGACCAAAA+CGG | + | tig0027766:52108-52127 | None:intergenic | 45.0% | |
| TTGGGATGAGACTTGTATGC+AGG | - | tig0027766:52120-52139 | Msa1435750:three_prime_UTR | 45.0% | |
| ATACCTTGTGGACATCACAG+AGG | - | tig0027766:52920-52939 | Msa1435750:intron | 45.0% | |
| TTGGGCTATGAAGGACAAAC+AGG | - | tig0027766:53055-53074 | Msa1435750:intron | 45.0% | |
| GTGTATGCCCAACATGTACT+TGG | - | tig0027766:53349-53368 | Msa1435750:five_prime_UTR | 45.0% | |
| !! | TCATCCGTTTTGGTCACGAT+TGG | - | tig0027766:52101-52120 | Msa1435750:three_prime_UTR | 45.0% |
| !! | CATCCGTTTTGGTCACGATT+GGG | - | tig0027766:52102-52121 | Msa1435750:three_prime_UTR | 45.0% |
| CATCCCAATCGTGACCAAAA+CGG | + | tig0027766:52108-52127 | None:intergenic | 45.0% | |
| TTGGGATGAGACTTGTATGC+AGG | - | tig0027766:52120-52139 | Msa1435750:three_prime_UTR | 45.0% | |
| ATACCTTGTGGACATCACAG+AGG | - | tig0027766:52920-52939 | Msa1435750:intron | 45.0% | |
| TTGGGCTATGAAGGACAAAC+AGG | - | tig0027766:53055-53074 | Msa1435750:intron | 45.0% | |
| GTGTATGCCCAACATGTACT+TGG | - | tig0027766:53349-53368 | Msa1435750:five_prime_UTR | 45.0% | |
| TCACTTTGTCTCCACACTCG+CGG | - | tig0027766:51916-51935 | Msa1435750:three_prime_UTR | 50.0% | |
| ATAACATAACGCCGCGAGTG+TGG | + | tig0027766:51930-51949 | None:intergenic | 50.0% | |
| CATGCTGCCTCACTTGCATT+CGG | - | tig0027766:52030-52049 | Msa1435750:three_prime_UTR | 50.0% | |
| ATGCTGCCTCACTTGCATTC+GGG | - | tig0027766:52031-52050 | Msa1435750:three_prime_UTR | 50.0% | |
| ! | CGTCTCGTTGTCATCCGTTT+TGG | - | tig0027766:52091-52110 | Msa1435750:three_prime_UTR | 50.0% |
| GGTGTGTGTCAAGATGGATG+AGG | - | tig0027766:52854-52873 | Msa1435750:intron | 50.0% | |
| !! | GATGGATGAGGTGCTGTCAT+CGG | - | tig0027766:52866-52885 | Msa1435750:intron | 50.0% |
| ! | AGACTGTCTACAGAGGTGCA+AGG | - | tig0027766:53096-53115 | Msa1435750:intron | 50.0% |
| ! | TGTCTACAGAGGTGCAAGGA+AGG | - | tig0027766:53100-53119 | Msa1435750:intron | 50.0% |
| ! | GTCTACAGAGGTGCAAGGAA+GGG | - | tig0027766:53101-53120 | Msa1435750:intron | 50.0% |
| ! | TCTACAGAGGTGCAAGGAAG+GGG | - | tig0027766:53102-53121 | Msa1435750:intron | 50.0% |
| TCACTTTGTCTCCACACTCG+CGG | - | tig0027766:51916-51935 | Msa1435750:three_prime_UTR | 50.0% | |
| ATAACATAACGCCGCGAGTG+TGG | + | tig0027766:51930-51949 | None:intergenic | 50.0% | |
| CATGCTGCCTCACTTGCATT+CGG | - | tig0027766:52030-52049 | Msa1435750:three_prime_UTR | 50.0% | |
| ATGCTGCCTCACTTGCATTC+GGG | - | tig0027766:52031-52050 | Msa1435750:three_prime_UTR | 50.0% | |
| ! | CGTCTCGTTGTCATCCGTTT+TGG | - | tig0027766:52091-52110 | Msa1435750:three_prime_UTR | 50.0% |
| GGTGTGTGTCAAGATGGATG+AGG | - | tig0027766:52854-52873 | Msa1435750:intron | 50.0% | |
| !! | GATGGATGAGGTGCTGTCAT+CGG | - | tig0027766:52866-52885 | Msa1435750:intron | 50.0% |
| ! | AGACTGTCTACAGAGGTGCA+AGG | - | tig0027766:53096-53115 | Msa1435750:intron | 50.0% |
| ! | TGTCTACAGAGGTGCAAGGA+AGG | - | tig0027766:53100-53119 | Msa1435750:intron | 50.0% |
| ! | GTCTACAGAGGTGCAAGGAA+GGG | - | tig0027766:53101-53120 | Msa1435750:intron | 50.0% |
| ! | TCTACAGAGGTGCAAGGAAG+GGG | - | tig0027766:53102-53121 | Msa1435750:intron | 50.0% |
| TGCCTCACTTGCATTCGGGA+TGG | - | tig0027766:52035-52054 | Msa1435750:three_prime_UTR | 55.0% | |
| GCCTCACTTGCATTCGGGAT+GGG | - | tig0027766:52036-52055 | Msa1435750:three_prime_UTR | 55.0% | |
| !! | TTCGGGATGGGCTGTTGATC+AGG | - | tig0027766:52048-52067 | Msa1435750:three_prime_UTR | 55.0% |
| TGATCAGGCAATCCTCGCTG+AGG | - | tig0027766:52063-52082 | Msa1435750:three_prime_UTR | 55.0% | |
| ACCACGAACACCACTGCGAT+TGG | - | tig0027766:52691-52710 | Msa1435750:intron | 55.0% | |
| ACCAATCGCAGTGGTGTTCG+TGG | + | tig0027766:52695-52714 | None:intergenic | 55.0% | |
| GCACCTCTGTGATGTCCACA+AGG | + | tig0027766:52926-52945 | None:intergenic | 55.0% | |
| TGCCTCACTTGCATTCGGGA+TGG | - | tig0027766:52035-52054 | Msa1435750:three_prime_UTR | 55.0% | |
| GCCTCACTTGCATTCGGGAT+GGG | - | tig0027766:52036-52055 | Msa1435750:three_prime_UTR | 55.0% | |
| !! | TTCGGGATGGGCTGTTGATC+AGG | - | tig0027766:52048-52067 | Msa1435750:three_prime_UTR | 55.0% |
| TGATCAGGCAATCCTCGCTG+AGG | - | tig0027766:52063-52082 | Msa1435750:three_prime_UTR | 55.0% | |
| ACCACGAACACCACTGCGAT+TGG | - | tig0027766:52691-52710 | Msa1435750:intron | 55.0% | |
| ACCAATCGCAGTGGTGTTCG+TGG | + | tig0027766:52695-52714 | None:intergenic | 55.0% | |
| GCACCTCTGTGATGTCCACA+AGG | + | tig0027766:52926-52945 | None:intergenic | 55.0% | |
| GCCCATCCCGAATGCAAGTG+AGG | + | tig0027766:52040-52059 | None:intergenic | 60.0% | |
| TCAGGCAATCCTCGCTGAGG+AGG | - | tig0027766:52066-52085 | Msa1435750:three_prime_UTR | 60.0% | |
| GCCCATCCCGAATGCAAGTG+AGG | + | tig0027766:52040-52059 | None:intergenic | 60.0% | |
| TCAGGCAATCCTCGCTGAGG+AGG | - | tig0027766:52066-52085 | Msa1435750:three_prime_UTR | 60.0% | |
| CGAGACGTTCCTCCTCAGCG+AGG | + | tig0027766:52078-52097 | None:intergenic | 65.0% | |
| ! | AGAGGTGCAAGGAAGGGGCG+TGG | - | tig0027766:53107-53126 | Msa1435750:intron | 65.0% |
| CGAGACGTTCCTCCTCAGCG+AGG | + | tig0027766:52078-52097 | None:intergenic | 65.0% | |
| ! | AGAGGTGCAAGGAAGGGGCG+TGG | - | tig0027766:53107-53126 | Msa1435750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027766 | gene | 51878 | 53445 | 51878 | ID=Msa1435750;Name=Msa1435750 |
| tig0027766 | mRNA | 51878 | 53445 | 51878 | ID=Msa1435750-mRNA-1;Parent=Msa1435750;Name=Msa1435750-mRNA-1;_AED=0.02;_eAED=0.02;_QI=144|1|1|1|1|1|2|270|142 |
| tig0027766 | exon | 51878 | 52456 | 51878 | ID=Msa1435750-mRNA-1:exon:9843;Parent=Msa1435750-mRNA-1 |
| tig0027766 | exon | 53182 | 53445 | 53182 | ID=Msa1435750-mRNA-1:exon:9842;Parent=Msa1435750-mRNA-1 |
| tig0027766 | five_prime_UTR | 53302 | 53445 | 53302 | ID=Msa1435750-mRNA-1:five_prime_utr;Parent=Msa1435750-mRNA-1 |
| tig0027766 | CDS | 53182 | 53301 | 53182 | ID=Msa1435750-mRNA-1:cds;Parent=Msa1435750-mRNA-1 |
| tig0027766 | CDS | 52148 | 52456 | 52148 | ID=Msa1435750-mRNA-1:cds;Parent=Msa1435750-mRNA-1 |
| tig0027766 | three_prime_UTR | 51878 | 52147 | 51878 | ID=Msa1435750-mRNA-1:three_prime_utr;Parent=Msa1435750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
