Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524180 | XP_003604024.1 | 95.785 | 261 | 10 | 1 | 1 | 260 | 1 | 261 | 2.47e-178 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524180 | sp|Q7XA67|MTN2_ARATH | 63.008 | 246 | 91 | 0 | 15 | 260 | 9 | 254 | 4.78e-123 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524180 | G7J8G7 | 95.785 | 261 | 10 | 1 | 1 | 260 | 1 | 261 | 1.18e-178 | 501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041970 | Msa0524180 | 0.805178 | 1.512969e-49 | -8.615850e-47 |
| Msa0051270 | Msa0524180 | 0.801299 | 9.614770e-49 | -8.615850e-47 |
| Msa0136390 | Msa0524180 | 0.801622 | 8.256240e-49 | -8.615850e-47 |
| Msa0178990 | Msa0524180 | 0.800054 | 1.725587e-48 | -8.615850e-47 |
| Msa0199690 | Msa0524180 | 0.820090 | 8.241794e-53 | -8.615850e-47 |
| Msa0471590 | Msa0524180 | 0.813262 | 2.798502e-51 | -8.615850e-47 |
| Msa0355270 | Msa0524180 | 0.803493 | 3.395293e-49 | -8.615850e-47 |
| Msa0524180 | Msa0797120 | 0.814316 | 1.639521e-51 | -8.615850e-47 |
| Msa0524180 | Msa0869120 | 0.800148 | 1.650930e-48 | -8.615850e-47 |
| Msa0524180 | Msa0878980 | -0.823194 | 1.579647e-53 | -8.615850e-47 |
| Msa0524180 | Msa0933290 | 0.814268 | 1.679811e-51 | -8.615850e-47 |
| Msa0524180 | Msa0939790 | 0.803888 | 2.811185e-49 | -8.615850e-47 |
| Msa0524180 | Msa1267260 | 0.801991 | 6.934568e-49 | -8.615850e-47 |
| Msa0524180 | Msa1316830 | 0.803817 | 2.909144e-49 | -8.615850e-47 |
| Msa0524180 | Msa1364910 | 0.803637 | 3.170301e-49 | -8.615850e-47 |
| Msa0524180 | Msa1365070 | 0.893876 | 4.178399e-75 | -8.615850e-47 |
| Msa0524180 | Msa1367360 | 0.985544 | 6.747259e-164 | -8.615850e-47 |
| Msa0524180 | Msa1404730 | 0.810829 | 9.488405e-51 | -8.615850e-47 |
| Msa0524180 | Msa1435750 | 0.835342 | 1.774002e-56 | -8.615850e-47 |
| Msa0524180 | Msa1443100 | 0.991737 | 2.912985e-189 | -8.615850e-47 |
| Msa0524180 | Msa1453620 | 0.807586 | 4.700911e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524180 | MtrunA17_Chr3g0145451 | 95.785 | 261 | 10 | 1 | 1 | 260 | 1 | 261 | 0.0 | 501 |
| Msa0524180 | MtrunA17_Chr4g0018461 | 84.946 | 93 | 14 | 0 | 168 | 260 | 1 | 93 | 8.58e-50 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0524180 | AT4G34840.1 | 63.008 | 246 | 91 | 0 | 15 | 260 | 9 | 254 | 4.86e-124 | 353 |
| Msa0524180 | AT4G38800.1 | 61.538 | 260 | 100 | 0 | 1 | 260 | 8 | 267 | 4.90e-122 | 348 |
| Msa0524180 | AT4G34840.2 | 63.948 | 233 | 84 | 0 | 28 | 260 | 1 | 233 | 1.64e-118 | 338 |
| Msa0524180 | AT4G34840.4 | 66.502 | 203 | 68 | 0 | 58 | 260 | 2 | 204 | 5.89e-104 | 300 |
| Msa0524180 | AT4G34840.5 | 61.878 | 181 | 69 | 0 | 15 | 195 | 9 | 189 | 1.82e-88 | 261 |
| Msa0524180 | AT4G34840.3 | 61.878 | 181 | 69 | 0 | 15 | 195 | 9 | 189 | 1.82e-88 | 261 |
Find 63 sgRNAs with CRISPR-Local
Find 544 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAATTCCTACAAAATT+TGG | 0.166272 | 3_4:+77685921 | Msa0524180:CDS |
| CCTGGTAAAGATCCTTCTTT+TGG | 0.203643 | 3_4:+77682648 | Msa0524180:CDS |
| GTCTCAATTTGAACTTGATT+TGG | 0.264829 | 3_4:+77682625 | Msa0524180:CDS |
| ACATGAAACAATATTCGATT+TGG | 0.276638 | 3_4:+77682154 | Msa0524180:five_prime_UTR |
| CTGCTGGTGGCTTCAAGGCC+AGG | 0.284627 | 3_4:+77682760 | Msa0524180:CDS |
| AAAATTGGAAAGATGAAATT+AGG | 0.292361 | 3_4:-77686027 | None:intergenic |
| CGTACCCAAGGAACACCTTC+TGG | 0.300889 | 3_4:-77682582 | None:intergenic |
| TGGCACTGCTGGTGGCTTCA+AGG | 0.343540 | 3_4:+77682755 | Msa0524180:CDS |
| ATGAATGACACATACAATAT+TGG | 0.356948 | 3_4:-77686175 | None:intergenic |
| ATCATTAATGCTGGCACTGC+TGG | 0.358624 | 3_4:+77682744 | Msa0524180:CDS |
| GTTGTACACTACCAATTGAT+TGG | 0.362358 | 3_4:+77686071 | Msa0524180:three_prime_UTR |
| CTCACATATTTCCAATCAAT+TGG | 0.370222 | 3_4:-77686082 | None:intergenic |
| TGTAACAAGAGCAGAGGATA+TGG | 0.391669 | 3_4:-77682688 | None:intergenic |
| TTAAGTTCCTTTACAAGGTT+GGG | 0.394633 | 3_4:-77684154 | None:intergenic |
| TGCTGGTGGCTTCAAGGCCA+GGG | 0.397697 | 3_4:+77682761 | Msa0524180:CDS |
| CATGAAACAATATTCGATTT+GGG | 0.398491 | 3_4:+77682155 | Msa0524180:five_prime_UTR |
| AGCTCAAATTTATTGACAAC+AGG | 0.399480 | 3_4:-77682449 | None:intergenic |
| TGTAACTTCTGCACTTGATC+TGG | 0.402973 | 3_4:+77685948 | Msa0524180:CDS |
| ACTTGATCTGGCTGTCGAAC+AGG | 0.406655 | 3_4:+77685960 | Msa0524180:CDS |
| CCAGCATTAATGATCAAATC+AGG | 0.413935 | 3_4:-77682735 | None:intergenic |
| GACTATGACGATGTTGGAAA+TGG | 0.417905 | 3_4:-77682312 | None:intergenic |
| TCCAACATCGTCATAGTCAT+TGG | 0.422187 | 3_4:+77682317 | Msa0524180:CDS |
| TGATGCAACTGTCAAAGATA+TGG | 0.423834 | 3_4:+77685608 | Msa0524180:CDS |
| GTTCCTTGGGTACGTTATCA+TGG | 0.425081 | 3_4:+77682591 | Msa0524180:CDS |
| ATTAAGTTCCTTTACAAGGT+TGG | 0.433930 | 3_4:-77684155 | None:intergenic |
| GGATTTAGACTTACAGGAAT+GGG | 0.445539 | 3_4:-77682843 | None:intergenic |
| AAACAGAGTTGGACTGCAAA+TGG | 0.458970 | 3_4:+77682241 | Msa0524180:exon |
| TACAAGGTTGGGTGTTTCAA+AGG | 0.482086 | 3_4:-77684143 | None:intergenic |
| CTAACGGAGAGTTAGGATCT+TGG | 0.490412 | 3_4:-77682475 | None:intergenic |
| TGTAAAGGAACTTAATCTAA+AGG | 0.497465 | 3_4:+77684162 | Msa0524180:CDS |
| GAATGGCGATATAAATTAAG+AGG | 0.498221 | 3_4:-77686219 | None:intergenic |
| TGTAGGAATTCTTCAGCAGT+TGG | 0.499721 | 3_4:-77685913 | None:intergenic |
| AATTTGAACTTGATTTGGCC+TGG | 0.507460 | 3_4:+77682630 | Msa0524180:CDS |
| TGAAACACCCAACCTTGTAA+AGG | 0.516673 | 3_4:+77684147 | Msa0524180:CDS |
| TTAGATTAAGTTCCTTTACA+AGG | 0.520921 | 3_4:-77684159 | None:intergenic |
| GTCACCAACAGTAGCTCCCC+TGG | 0.526826 | 3_4:-77682778 | None:intergenic |
| CCTGATTTGATCATTAATGC+TGG | 0.529062 | 3_4:+77682735 | Msa0524180:CDS |
| GAAAAGAAACGAAACAGAGT+TGG | 0.532121 | 3_4:+77682230 | Msa0524180:five_prime_UTR |
| ATTAATGCTGGCACTGCTGG+TGG | 0.533938 | 3_4:+77682747 | Msa0524180:CDS |
| CAGGTGGCTAAATTGTCTAC+TGG | 0.538602 | 3_4:+77685537 | Msa0524180:intron |
| GCTGGTGGCTTCAAGGCCAG+GGG | 0.541743 | 3_4:+77682762 | Msa0524180:CDS |
| AGGATTTAGACTTACAGGAA+TGG | 0.544029 | 3_4:-77682844 | None:intergenic |
| CGTTATCATGGAAAATTCAA+AGG | 0.546606 | 3_4:+77682603 | Msa0524180:CDS |
| ACTATGACGATGTTGGAAAT+GGG | 0.546835 | 3_4:-77682311 | None:intergenic |
| AAATTGCAGGAACTTTAAGA+AGG | 0.556348 | 3_4:-77685852 | None:intergenic |
| CCAAAAGAAGGATCTTTACC+AGG | 0.561581 | 3_4:-77682648 | None:intergenic |
| ACCAATGACTATGACGATGT+TGG | 0.562519 | 3_4:-77682318 | None:intergenic |
| ACACTGTCAACCCCAAAAGA+AGG | 0.562843 | 3_4:-77682660 | None:intergenic |
| TTTGCAGGAGTAGACGTGAA+TGG | 0.572420 | 3_4:-77686236 | None:intergenic |
| CCACAAGAGAGTGGTATGGT+TGG | 0.578175 | 3_4:-77686152 | None:intergenic |
| TCCAATATCAGCTATGCAGA+CGG | 0.581725 | 3_4:+77682418 | Msa0524180:intron |
| CTCTTTAGATATGACACCGC+AGG | 0.586462 | 3_4:+77685563 | Msa0524180:CDS |
| GCTGTGACTGATATTATTGA+CGG | 0.587769 | 3_4:+77685883 | Msa0524180:CDS |
| AAGGCCAGGGGAGCTACTGT+TGG | 0.594473 | 3_4:+77682774 | Msa0524180:CDS |
| AGCATATGTAACAAGAGCAG+AGG | 0.596717 | 3_4:-77682694 | None:intergenic |
| TTTCCATGATAACGTACCCA+AGG | 0.610898 | 3_4:-77682594 | None:intergenic |
| TTGGCCACAAGAGAGTGGTA+TGG | 0.634094 | 3_4:-77686156 | None:intergenic |
| GCAGGATGAATCATCAATCA+CGG | 0.637150 | 3_4:+77685581 | Msa0524180:CDS |
| CAATATTGGCCACAAGAGAG+TGG | 0.638924 | 3_4:-77686161 | None:intergenic |
| TGCAACTGTCAAAGATATGG+AGG | 0.640472 | 3_4:+77685611 | Msa0524180:CDS |
| CCAACCATACCACTCTCTTG+TGG | 0.644862 | 3_4:+77686152 | Msa0524180:three_prime_UTR |
| GTGATTGATGATTCATCCTG+CGG | 0.661402 | 3_4:-77685579 | None:intergenic |
| AATATCAGCTATGCAGACGG+AGG | 0.702961 | 3_4:+77682421 | Msa0524180:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATTAATAATTATAT+TGG | - | chr3_4:77683208-77683227 | None:intergenic | 0.0% |
| !! | ATTATTAATTAATAATTATT+TGG | + | chr3_4:77683213-77683232 | Msa0524180:intron | 0.0% |
| !! | TTATTAATTAATAATTATAT+TGG | - | chr3_4:77683208-77683227 | None:intergenic | 0.0% |
| !! | ATTATTAATTAATAATTATT+TGG | + | chr3_4:77683213-77683232 | Msa0524180:intron | 0.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | + | chr3_4:77683222-77683241 | Msa0524180:intron | 10.0% |
| !!! | TTTAATAATTATTTCTTACA+AGG | - | chr3_4:77683539-77683558 | None:intergenic | 10.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | + | chr3_4:77683222-77683241 | Msa0524180:intron | 10.0% |
| !!! | TTTAATAATTATTTCTTACA+AGG | - | chr3_4:77683539-77683558 | None:intergenic | 10.0% |
| !! | TAATAAAGTAAAAAGACTAA+CGG | - | chr3_4:77682494-77682513 | None:intergenic | 15.0% |
| !!! | TCTTTTTACTTTATTAGATT+AGG | + | chr3_4:77682498-77682517 | Msa0524180:intron | 15.0% |
| !!! | CTTTTTACTTTATTAGATTA+GGG | + | chr3_4:77682499-77682518 | Msa0524180:intron | 15.0% |
| !! | AGTATTTAAATTAATGAATC+TGG | + | chr3_4:77683157-77683176 | Msa0524180:intron | 15.0% |
| !! | GTATTTAAATTAATGAATCT+GGG | + | chr3_4:77683158-77683177 | Msa0524180:intron | 15.0% |
| !! | TATAAAGAAAACTCTATTAT+AGG | + | chr3_4:77684503-77684522 | Msa0524180:intron | 15.0% |
| !!! | TGATTTTATCAAATTATTAC+CGG | + | chr3_4:77685334-77685353 | Msa0524180:intron | 15.0% |
| !! | TGAATAAAGTAATTAAGAAA+AGG | - | chr3_4:77685480-77685499 | None:intergenic | 15.0% |
| !! | TAATAAAGTAAAAAGACTAA+CGG | - | chr3_4:77682494-77682513 | None:intergenic | 15.0% |
| !!! | TCTTTTTACTTTATTAGATT+AGG | + | chr3_4:77682498-77682517 | Msa0524180:intron | 15.0% |
| !!! | CTTTTTACTTTATTAGATTA+GGG | + | chr3_4:77682499-77682518 | Msa0524180:intron | 15.0% |
| !! | AGTATTTAAATTAATGAATC+TGG | + | chr3_4:77683157-77683176 | Msa0524180:intron | 15.0% |
| !! | GTATTTAAATTAATGAATCT+GGG | + | chr3_4:77683158-77683177 | Msa0524180:intron | 15.0% |
| !! | TATAAAGAAAACTCTATTAT+AGG | + | chr3_4:77684503-77684522 | Msa0524180:intron | 15.0% |
| !!! | TGATTTTATCAAATTATTAC+CGG | + | chr3_4:77685334-77685353 | Msa0524180:intron | 15.0% |
| !! | TGAATAAAGTAATTAAGAAA+AGG | - | chr3_4:77685480-77685499 | None:intergenic | 15.0% |
| !!! | TTTATTAGATTAGGGTTTTT+AGG | + | chr3_4:77682507-77682526 | Msa0524180:intron | 20.0% |
| !!! | TTATTAGATTAGGGTTTTTA+GGG | + | chr3_4:77682508-77682527 | Msa0524180:intron | 20.0% |
| !! | CAATTGAATTGAATTGAATT+AGG | - | chr3_4:77682551-77682570 | None:intergenic | 20.0% |
| !! | ATCCTACAAAATTCATATAT+AGG | + | chr3_4:77682951-77682970 | Msa0524180:intron | 20.0% |
| !!! | AACCTATATATGAATTTTGT+AGG | - | chr3_4:77682956-77682975 | None:intergenic | 20.0% |
| !!! | TTATTACATTTTTACGAAAC+CGG | + | chr3_4:77683310-77683329 | Msa0524180:intron | 20.0% |
| !!! | GTATTTCTAAACATTACATT+AGG | - | chr3_4:77683920-77683939 | None:intergenic | 20.0% |
| !!! | GAGCAAGAAATAATATATTT+TGG | - | chr3_4:77684234-77684253 | None:intergenic | 20.0% |
| !!! | ACTCTATTTTATTAACATGT+AGG | + | chr3_4:77684999-77685018 | Msa0524180:intron | 20.0% |
| !! | TTAACATGTAGGAAAATTTA+TGG | + | chr3_4:77685010-77685029 | Msa0524180:intron | 20.0% |
| !! | CAAAATAATAAGTAATCTCA+AGG | - | chr3_4:77685091-77685110 | None:intergenic | 20.0% |
| !!! | TTTGATTTGTGTTCTTTTTA+AGG | + | chr3_4:77685142-77685161 | Msa0524180:intron | 20.0% |
| !!! | AAACAAATCAAGATGTATTT+TGG | + | chr3_4:77685434-77685453 | Msa0524180:intron | 20.0% |
| !! | AAAGTAATTAAGAAAAGGAT+TGG | - | chr3_4:77685475-77685494 | None:intergenic | 20.0% |
| !! | AAAATTGGAAAGATGAAATT+AGG | - | chr3_4:77686030-77686049 | None:intergenic | 20.0% |
| !! | GTGTTGCATATAAAAAAAAT+TGG | - | chr3_4:77686045-77686064 | None:intergenic | 20.0% |
| !!! | TTTATTAGATTAGGGTTTTT+AGG | + | chr3_4:77682507-77682526 | Msa0524180:intron | 20.0% |
| !!! | TTATTAGATTAGGGTTTTTA+GGG | + | chr3_4:77682508-77682527 | Msa0524180:intron | 20.0% |
| !! | CAATTGAATTGAATTGAATT+AGG | - | chr3_4:77682551-77682570 | None:intergenic | 20.0% |
| !! | ATCCTACAAAATTCATATAT+AGG | + | chr3_4:77682951-77682970 | Msa0524180:intron | 20.0% |
| !!! | AACCTATATATGAATTTTGT+AGG | - | chr3_4:77682956-77682975 | None:intergenic | 20.0% |
| !!! | TTATTACATTTTTACGAAAC+CGG | + | chr3_4:77683310-77683329 | Msa0524180:intron | 20.0% |
| !!! | GTATTTCTAAACATTACATT+AGG | - | chr3_4:77683920-77683939 | None:intergenic | 20.0% |
| !!! | GAGCAAGAAATAATATATTT+TGG | - | chr3_4:77684234-77684253 | None:intergenic | 20.0% |
| !!! | ACTCTATTTTATTAACATGT+AGG | + | chr3_4:77684999-77685018 | Msa0524180:intron | 20.0% |
| !! | TTAACATGTAGGAAAATTTA+TGG | + | chr3_4:77685010-77685029 | Msa0524180:intron | 20.0% |
| !! | CAAAATAATAAGTAATCTCA+AGG | - | chr3_4:77685091-77685110 | None:intergenic | 20.0% |
| !!! | TTTGATTTGTGTTCTTTTTA+AGG | + | chr3_4:77685142-77685161 | Msa0524180:intron | 20.0% |
| !!! | AAACAAATCAAGATGTATTT+TGG | + | chr3_4:77685434-77685453 | Msa0524180:intron | 20.0% |
| !! | AAAGTAATTAAGAAAAGGAT+TGG | - | chr3_4:77685475-77685494 | None:intergenic | 20.0% |
| !! | AAAATTGGAAAGATGAAATT+AGG | - | chr3_4:77686030-77686049 | None:intergenic | 20.0% |
| !! | GTGTTGCATATAAAAAAAAT+TGG | - | chr3_4:77686045-77686064 | None:intergenic | 20.0% |
| ! | ACATGAAACAATATTCGATT+TGG | + | chr3_4:77682154-77682173 | Msa0524180:five_prime_UTR | 25.0% |
| ! | CATGAAACAATATTCGATTT+GGG | + | chr3_4:77682155-77682174 | Msa0524180:five_prime_UTR | 25.0% |
| ! | TATACTTTATCCTTCAGATT+GGG | + | chr3_4:77682899-77682918 | Msa0524180:intron | 25.0% |
| !!! | ACAGCAAAAAAAGTGTTTTT+TGG | + | chr3_4:77683268-77683287 | Msa0524180:intron | 25.0% |
| !! | TATTACATTTTTACGAAACC+GGG | + | chr3_4:77683311-77683330 | Msa0524180:intron | 25.0% |
| ! | TAAGAAAAGTAAGACTAAAG+TGG | + | chr3_4:77683618-77683637 | Msa0524180:intron | 25.0% |
| ! | AAAAGGAAACAAAAAGAAGA+TGG | - | chr3_4:77683713-77683732 | None:intergenic | 25.0% |
| ! | AATACAGATGCAAGTTTAAA+AGG | - | chr3_4:77683730-77683749 | None:intergenic | 25.0% |
| ! | TTAAACTTGCATCTGTATTA+TGG | + | chr3_4:77683731-77683750 | Msa0524180:intron | 25.0% |
| ! | TGTAATGTTTAGAAATACGA+AGG | + | chr3_4:77683922-77683941 | Msa0524180:intron | 25.0% |
| !!! | ATTTCTTTTGTTTTCTGGTT+GGG | + | chr3_4:77683988-77684007 | Msa0524180:intron | 25.0% |
| !! | ATATAATTGTTGTCTTTTGC+AGG | + | chr3_4:77684087-77684106 | Msa0524180:intron | 25.0% |
| ! | TTAGATTAAGTTCCTTTACA+AGG | - | chr3_4:77684162-77684181 | None:intergenic | 25.0% |
| ! | TGTAAAGGAACTTAATCTAA+AGG | + | chr3_4:77684162-77684181 | Msa0524180:CDS | 25.0% |
| ! | CAAGACAATCATAAACAATA+GGG | - | chr3_4:77684682-77684701 | None:intergenic | 25.0% |
| ! | TTATATATGCATAGTGAACT+AGG | + | chr3_4:77684756-77684775 | Msa0524180:intron | 25.0% |
| ! | TATATATGCATAGTGAACTA+GGG | + | chr3_4:77684757-77684776 | Msa0524180:intron | 25.0% |
| ! | AACAAATTCAGCTATTAGAA+TGG | + | chr3_4:77684860-77684879 | Msa0524180:intron | 25.0% |
| ! | TCATTCTGAATTGAAACATA+TGG | + | chr3_4:77685409-77685428 | Msa0524180:intron | 25.0% |
| !! | GAACATTTGGTTGATTTATT+GGG | + | chr3_4:77685673-77685692 | Msa0524180:intron | 25.0% |
| !! | AACATTTGGTTGATTTATTG+GGG | + | chr3_4:77685674-77685693 | Msa0524180:intron | 25.0% |
| ! | TTAGAAGGTGATTTATTTGA+TGG | - | chr3_4:77685741-77685760 | None:intergenic | 25.0% |
| ! | TTAGGTCTCTATAATTTAGA+AGG | - | chr3_4:77685756-77685775 | None:intergenic | 25.0% |
| ! | TGAAGAATTCCTACAAAATT+TGG | + | chr3_4:77685921-77685940 | Msa0524180:CDS | 25.0% |
| !! | AGGTCATTAATTTTATCGAT+GGG | + | chr3_4:77685980-77685999 | Msa0524180:CDS | 25.0% |
| ! | ATGAATGACACATACAATAT+TGG | - | chr3_4:77686178-77686197 | None:intergenic | 25.0% |
| ! | ACATGAAACAATATTCGATT+TGG | + | chr3_4:77682154-77682173 | Msa0524180:five_prime_UTR | 25.0% |
| ! | CATGAAACAATATTCGATTT+GGG | + | chr3_4:77682155-77682174 | Msa0524180:five_prime_UTR | 25.0% |
| ! | TATACTTTATCCTTCAGATT+GGG | + | chr3_4:77682899-77682918 | Msa0524180:intron | 25.0% |
| !!! | ACAGCAAAAAAAGTGTTTTT+TGG | + | chr3_4:77683268-77683287 | Msa0524180:intron | 25.0% |
| !! | TATTACATTTTTACGAAACC+GGG | + | chr3_4:77683311-77683330 | Msa0524180:intron | 25.0% |
| ! | TAAGAAAAGTAAGACTAAAG+TGG | + | chr3_4:77683618-77683637 | Msa0524180:intron | 25.0% |
| ! | AAAAGGAAACAAAAAGAAGA+TGG | - | chr3_4:77683713-77683732 | None:intergenic | 25.0% |
| ! | AATACAGATGCAAGTTTAAA+AGG | - | chr3_4:77683730-77683749 | None:intergenic | 25.0% |
| ! | TTAAACTTGCATCTGTATTA+TGG | + | chr3_4:77683731-77683750 | Msa0524180:intron | 25.0% |
| ! | TGTAATGTTTAGAAATACGA+AGG | + | chr3_4:77683922-77683941 | Msa0524180:intron | 25.0% |
| !!! | ATTTCTTTTGTTTTCTGGTT+GGG | + | chr3_4:77683988-77684007 | Msa0524180:intron | 25.0% |
| !! | ATATAATTGTTGTCTTTTGC+AGG | + | chr3_4:77684087-77684106 | Msa0524180:intron | 25.0% |
| ! | TTAGATTAAGTTCCTTTACA+AGG | - | chr3_4:77684162-77684181 | None:intergenic | 25.0% |
| ! | TGTAAAGGAACTTAATCTAA+AGG | + | chr3_4:77684162-77684181 | Msa0524180:CDS | 25.0% |
| ! | CAAGACAATCATAAACAATA+GGG | - | chr3_4:77684682-77684701 | None:intergenic | 25.0% |
| ! | TTATATATGCATAGTGAACT+AGG | + | chr3_4:77684756-77684775 | Msa0524180:intron | 25.0% |
| ! | TATATATGCATAGTGAACTA+GGG | + | chr3_4:77684757-77684776 | Msa0524180:intron | 25.0% |
| ! | AACAAATTCAGCTATTAGAA+TGG | + | chr3_4:77684860-77684879 | Msa0524180:intron | 25.0% |
| ! | TCATTCTGAATTGAAACATA+TGG | + | chr3_4:77685409-77685428 | Msa0524180:intron | 25.0% |
| !! | GAACATTTGGTTGATTTATT+GGG | + | chr3_4:77685673-77685692 | Msa0524180:intron | 25.0% |
| !! | AACATTTGGTTGATTTATTG+GGG | + | chr3_4:77685674-77685693 | Msa0524180:intron | 25.0% |
| ! | TTAGAAGGTGATTTATTTGA+TGG | - | chr3_4:77685741-77685760 | None:intergenic | 25.0% |
| ! | TTAGGTCTCTATAATTTAGA+AGG | - | chr3_4:77685756-77685775 | None:intergenic | 25.0% |
| ! | TGAAGAATTCCTACAAAATT+TGG | + | chr3_4:77685921-77685940 | Msa0524180:CDS | 25.0% |
| !! | AGGTCATTAATTTTATCGAT+GGG | + | chr3_4:77685980-77685999 | Msa0524180:CDS | 25.0% |
| ! | ATGAATGACACATACAATAT+TGG | - | chr3_4:77686178-77686197 | None:intergenic | 25.0% |
| ! | CGATTTGGGTACTAAAAAAA+AGG | + | chr3_4:77682169-77682188 | Msa0524180:five_prime_UTR | 30.0% |
| GGGTACTAAAAAAAAGGAAA+AGG | + | chr3_4:77682175-77682194 | Msa0524180:five_prime_UTR | 30.0% | |
| AGCTCAAATTTATTGACAAC+AGG | - | chr3_4:77682452-77682471 | None:intergenic | 30.0% | |
| CGTTATCATGGAAAATTCAA+AGG | + | chr3_4:77682603-77682622 | Msa0524180:CDS | 30.0% | |
| GTCTCAATTTGAACTTGATT+TGG | + | chr3_4:77682625-77682644 | Msa0524180:CDS | 30.0% | |
| GATAAAGGATTTAGACTTAC+AGG | - | chr3_4:77682852-77682871 | None:intergenic | 30.0% | |
| GTAAGTCTAAATCCTTTATC+TGG | + | chr3_4:77682852-77682871 | Msa0524180:intron | 30.0% | |
| CAAAAAGCAAAACCAGATAA+AGG | - | chr3_4:77682867-77682886 | None:intergenic | 30.0% | |
| CTATACTTTATCCTTCAGAT+TGG | + | chr3_4:77682898-77682917 | Msa0524180:intron | 30.0% | |
| !! | GTTGTTTTCTATGCATATGT+AGG | - | chr3_4:77682979-77682998 | None:intergenic | 30.0% |
| TCTTAAAATTCTGGGTTTGT+GGG | - | chr3_4:77683349-77683368 | None:intergenic | 30.0% | |
| TTCTTAAAATTCTGGGTTTG+TGG | - | chr3_4:77683350-77683369 | None:intergenic | 30.0% | |
| GATGGTCTTCTTAAAATTCT+GGG | - | chr3_4:77683357-77683376 | None:intergenic | 30.0% | |
| !! | CAGAATTTTAAGAAGACCAT+CGG | + | chr3_4:77683356-77683375 | Msa0524180:intron | 30.0% |
| AAAGTAACGCATGACATAAA+AGG | - | chr3_4:77683648-77683667 | None:intergenic | 30.0% | |
| !!! | ATAGCTCTAACTGTTTTTAC+TGG | + | chr3_4:77683814-77683833 | Msa0524180:intron | 30.0% |
| ATGTTTAGAAATACGAAGGT+TGG | + | chr3_4:77683926-77683945 | Msa0524180:intron | 30.0% | |
| TAGGCACTAAGAAACATTTA+GGG | - | chr3_4:77683953-77683972 | None:intergenic | 30.0% | |
| ATAGGCACTAAGAAACATTT+AGG | - | chr3_4:77683954-77683973 | None:intergenic | 30.0% | |
| AAAAGAAATGTAGCTGTGAT+AGG | - | chr3_4:77683977-77683996 | None:intergenic | 30.0% | |
| !!! | GCTACATTTCTTTTGTTTTC+TGG | + | chr3_4:77683983-77684002 | Msa0524180:intron | 30.0% |
| !!! | CATTTCTTTTGTTTTCTGGT+TGG | + | chr3_4:77683987-77684006 | Msa0524180:intron | 30.0% |
| !!! | TTTCTTTTGTTTTCTGGTTG+GGG | + | chr3_4:77683989-77684008 | Msa0524180:intron | 30.0% |
| TTAAGTTCCTTTACAAGGTT+GGG | - | chr3_4:77684157-77684176 | None:intergenic | 30.0% | |
| ATTAAGTTCCTTTACAAGGT+TGG | - | chr3_4:77684158-77684177 | None:intergenic | 30.0% | |
| TGTCTACAATAAACCTACAA+TGG | - | chr3_4:77684389-77684408 | None:intergenic | 30.0% | |
| CTTACATTTGCATTTGTGAA+AGG | + | chr3_4:77684411-77684430 | Msa0524180:intron | 30.0% | |
| ATATATGTGTGTTCATGTGA+AGG | - | chr3_4:77684486-77684505 | None:intergenic | 30.0% | |
| ! | ACATGTTTTGTCATCCAAAT+TGG | + | chr3_4:77684571-77684590 | Msa0524180:intron | 30.0% |
| GTAAACAATGGTATCCAATT+TGG | - | chr3_4:77684588-77684607 | None:intergenic | 30.0% | |
| GATATAATTCACGTTCTCAA+AGG | - | chr3_4:77684660-77684679 | None:intergenic | 30.0% | |
| CCAAGACAATCATAAACAAT+AGG | - | chr3_4:77684683-77684702 | None:intergenic | 30.0% | |
| CCTATTGTTTATGATTGTCT+TGG | + | chr3_4:77684680-77684699 | Msa0524180:intron | 30.0% | |
| ATATATGCATAGTGAACTAG+GGG | + | chr3_4:77684758-77684777 | Msa0524180:intron | 30.0% | |
| GAAGCAAGCATATAATAATG+TGG | + | chr3_4:77684790-77684809 | Msa0524180:intron | 30.0% | |
| ! | TTGCTAACTTATAGTGGAAT+GGG | - | chr3_4:77684906-77684925 | None:intergenic | 30.0% |
| ! | ATTGCTAACTTATAGTGGAA+TGG | - | chr3_4:77684907-77684926 | None:intergenic | 30.0% |
| TATGCATTGCTAACTTATAG+TGG | - | chr3_4:77684912-77684931 | None:intergenic | 30.0% | |
| CGATGTATATCATAATTGAG+TGG | + | chr3_4:77684966-77684985 | Msa0524180:intron | 30.0% | |
| !!! | TTTTGGCTGTTATTTTTGAC+AGG | + | chr3_4:77685045-77685064 | Msa0524180:intron | 30.0% |
| TAATAAGTAATCTCAAGGAG+AGG | - | chr3_4:77685086-77685105 | None:intergenic | 30.0% | |
| TTGAAAGTAACTACATATGC+CGG | - | chr3_4:77685308-77685327 | None:intergenic | 30.0% | |
| TATCAAATTATTACCGGTGT+CGG | + | chr3_4:77685340-77685359 | Msa0524180:intron | 30.0% | |
| GAATGAAACATTGACACAAA+CGG | - | chr3_4:77685395-77685414 | None:intergenic | 30.0% | |
| ! | GGAACATTTGGTTGATTTAT+TGG | + | chr3_4:77685672-77685691 | Msa0524180:intron | 30.0% |
| TCCTTTGTTAAATATTCCAC+AGG | + | chr3_4:77685804-77685823 | Msa0524180:intron | 30.0% | |
| CCTTTGTTAAATATTCCACA+GGG | + | chr3_4:77685805-77685824 | Msa0524180:intron | 30.0% | |
| ! | AAATTGCAGGAACTTTAAGA+AGG | - | chr3_4:77685855-77685874 | None:intergenic | 30.0% |
| ! | ACAGCTTTTACAAAAATTGC+AGG | - | chr3_4:77685868-77685887 | None:intergenic | 30.0% |
| ! | CAGGTCATTAATTTTATCGA+TGG | + | chr3_4:77685979-77685998 | Msa0524180:CDS | 30.0% |
| CTCACATATTTCCAATCAAT+TGG | - | chr3_4:77686085-77686104 | None:intergenic | 30.0% | |
| GAATGGCGATATAAATTAAG+AGG | - | chr3_4:77686222-77686241 | None:intergenic | 30.0% | |
| ! | CGATTTGGGTACTAAAAAAA+AGG | + | chr3_4:77682169-77682188 | Msa0524180:five_prime_UTR | 30.0% |
| GGGTACTAAAAAAAAGGAAA+AGG | + | chr3_4:77682175-77682194 | Msa0524180:five_prime_UTR | 30.0% | |
| AGCTCAAATTTATTGACAAC+AGG | - | chr3_4:77682452-77682471 | None:intergenic | 30.0% | |
| CGTTATCATGGAAAATTCAA+AGG | + | chr3_4:77682603-77682622 | Msa0524180:CDS | 30.0% | |
| GTCTCAATTTGAACTTGATT+TGG | + | chr3_4:77682625-77682644 | Msa0524180:CDS | 30.0% | |
| GATAAAGGATTTAGACTTAC+AGG | - | chr3_4:77682852-77682871 | None:intergenic | 30.0% | |
| GTAAGTCTAAATCCTTTATC+TGG | + | chr3_4:77682852-77682871 | Msa0524180:intron | 30.0% | |
| CAAAAAGCAAAACCAGATAA+AGG | - | chr3_4:77682867-77682886 | None:intergenic | 30.0% | |
| CTATACTTTATCCTTCAGAT+TGG | + | chr3_4:77682898-77682917 | Msa0524180:intron | 30.0% | |
| !! | GTTGTTTTCTATGCATATGT+AGG | - | chr3_4:77682979-77682998 | None:intergenic | 30.0% |
| TCTTAAAATTCTGGGTTTGT+GGG | - | chr3_4:77683349-77683368 | None:intergenic | 30.0% | |
| TTCTTAAAATTCTGGGTTTG+TGG | - | chr3_4:77683350-77683369 | None:intergenic | 30.0% | |
| GATGGTCTTCTTAAAATTCT+GGG | - | chr3_4:77683357-77683376 | None:intergenic | 30.0% | |
| !! | CAGAATTTTAAGAAGACCAT+CGG | + | chr3_4:77683356-77683375 | Msa0524180:intron | 30.0% |
| AAAGTAACGCATGACATAAA+AGG | - | chr3_4:77683648-77683667 | None:intergenic | 30.0% | |
| !!! | ATAGCTCTAACTGTTTTTAC+TGG | + | chr3_4:77683814-77683833 | Msa0524180:intron | 30.0% |
| ATGTTTAGAAATACGAAGGT+TGG | + | chr3_4:77683926-77683945 | Msa0524180:intron | 30.0% | |
| TAGGCACTAAGAAACATTTA+GGG | - | chr3_4:77683953-77683972 | None:intergenic | 30.0% | |
| ATAGGCACTAAGAAACATTT+AGG | - | chr3_4:77683954-77683973 | None:intergenic | 30.0% | |
| AAAAGAAATGTAGCTGTGAT+AGG | - | chr3_4:77683977-77683996 | None:intergenic | 30.0% | |
| !!! | GCTACATTTCTTTTGTTTTC+TGG | + | chr3_4:77683983-77684002 | Msa0524180:intron | 30.0% |
| !!! | CATTTCTTTTGTTTTCTGGT+TGG | + | chr3_4:77683987-77684006 | Msa0524180:intron | 30.0% |
| !!! | TTTCTTTTGTTTTCTGGTTG+GGG | + | chr3_4:77683989-77684008 | Msa0524180:intron | 30.0% |
| TTAAGTTCCTTTACAAGGTT+GGG | - | chr3_4:77684157-77684176 | None:intergenic | 30.0% | |
| ATTAAGTTCCTTTACAAGGT+TGG | - | chr3_4:77684158-77684177 | None:intergenic | 30.0% | |
| TGTCTACAATAAACCTACAA+TGG | - | chr3_4:77684389-77684408 | None:intergenic | 30.0% | |
| CTTACATTTGCATTTGTGAA+AGG | + | chr3_4:77684411-77684430 | Msa0524180:intron | 30.0% | |
| ATATATGTGTGTTCATGTGA+AGG | - | chr3_4:77684486-77684505 | None:intergenic | 30.0% | |
| ! | ACATGTTTTGTCATCCAAAT+TGG | + | chr3_4:77684571-77684590 | Msa0524180:intron | 30.0% |
| GTAAACAATGGTATCCAATT+TGG | - | chr3_4:77684588-77684607 | None:intergenic | 30.0% | |
| GATATAATTCACGTTCTCAA+AGG | - | chr3_4:77684660-77684679 | None:intergenic | 30.0% | |
| CCAAGACAATCATAAACAAT+AGG | - | chr3_4:77684683-77684702 | None:intergenic | 30.0% | |
| CCTATTGTTTATGATTGTCT+TGG | + | chr3_4:77684680-77684699 | Msa0524180:intron | 30.0% | |
| ATATATGCATAGTGAACTAG+GGG | + | chr3_4:77684758-77684777 | Msa0524180:intron | 30.0% | |
| GAAGCAAGCATATAATAATG+TGG | + | chr3_4:77684790-77684809 | Msa0524180:intron | 30.0% | |
| ! | TTGCTAACTTATAGTGGAAT+GGG | - | chr3_4:77684906-77684925 | None:intergenic | 30.0% |
| ! | ATTGCTAACTTATAGTGGAA+TGG | - | chr3_4:77684907-77684926 | None:intergenic | 30.0% |
| TATGCATTGCTAACTTATAG+TGG | - | chr3_4:77684912-77684931 | None:intergenic | 30.0% | |
| CGATGTATATCATAATTGAG+TGG | + | chr3_4:77684966-77684985 | Msa0524180:intron | 30.0% | |
| !!! | TTTTGGCTGTTATTTTTGAC+AGG | + | chr3_4:77685045-77685064 | Msa0524180:intron | 30.0% |
| TAATAAGTAATCTCAAGGAG+AGG | - | chr3_4:77685086-77685105 | None:intergenic | 30.0% | |
| TTGAAAGTAACTACATATGC+CGG | - | chr3_4:77685308-77685327 | None:intergenic | 30.0% | |
| TATCAAATTATTACCGGTGT+CGG | + | chr3_4:77685340-77685359 | Msa0524180:intron | 30.0% | |
| GAATGAAACATTGACACAAA+CGG | - | chr3_4:77685395-77685414 | None:intergenic | 30.0% | |
| ! | GGAACATTTGGTTGATTTAT+TGG | + | chr3_4:77685672-77685691 | Msa0524180:intron | 30.0% |
| TCCTTTGTTAAATATTCCAC+AGG | + | chr3_4:77685804-77685823 | Msa0524180:intron | 30.0% | |
| CCTTTGTTAAATATTCCACA+GGG | + | chr3_4:77685805-77685824 | Msa0524180:intron | 30.0% | |
| ! | AAATTGCAGGAACTTTAAGA+AGG | - | chr3_4:77685855-77685874 | None:intergenic | 30.0% |
| ! | ACAGCTTTTACAAAAATTGC+AGG | - | chr3_4:77685868-77685887 | None:intergenic | 30.0% |
| ! | CAGGTCATTAATTTTATCGA+TGG | + | chr3_4:77685979-77685998 | Msa0524180:CDS | 30.0% |
| CTCACATATTTCCAATCAAT+TGG | - | chr3_4:77686085-77686104 | None:intergenic | 30.0% | |
| GAATGGCGATATAAATTAAG+AGG | - | chr3_4:77686222-77686241 | None:intergenic | 30.0% | |
| GAAAAGAAACGAAACAGAGT+TGG | + | chr3_4:77682230-77682249 | Msa0524180:five_prime_UTR | 35.0% | |
| !! | GTTGGAAATGGGTTTTTCAT+CGG | - | chr3_4:77682303-77682322 | None:intergenic | 35.0% |
| ACTATGACGATGTTGGAAAT+GGG | - | chr3_4:77682314-77682333 | None:intergenic | 35.0% | |
| AAAAAGACTAACGGAGAGTT+AGG | - | chr3_4:77682485-77682504 | None:intergenic | 35.0% | |
| !! | ATTGATTCCAGTTTTCCAGA+AGG | + | chr3_4:77682567-77682586 | Msa0524180:intron | 35.0% |
| !! | AATTTGAACTTGATTTGGCC+TGG | + | chr3_4:77682630-77682649 | Msa0524180:CDS | 35.0% |
| ! | CTGGTAAAGATCCTTCTTTT+GGG | + | chr3_4:77682649-77682668 | Msa0524180:CDS | 35.0% |
| ! | TGGTAAAGATCCTTCTTTTG+GGG | + | chr3_4:77682650-77682669 | Msa0524180:CDS | 35.0% |
| CCAGCATTAATGATCAAATC+AGG | - | chr3_4:77682738-77682757 | None:intergenic | 35.0% | |
| ! | CCTGATTTGATCATTAATGC+TGG | + | chr3_4:77682735-77682754 | Msa0524180:CDS | 35.0% |
| GGATTTAGACTTACAGGAAT+GGG | - | chr3_4:77682846-77682865 | None:intergenic | 35.0% | |
| AGGATTTAGACTTACAGGAA+TGG | - | chr3_4:77682847-77682866 | None:intergenic | 35.0% | |
| CGATGGTCTTCTTAAAATTC+TGG | - | chr3_4:77683358-77683377 | None:intergenic | 35.0% | |
| ATCCAGAATCAGAAATTGGT+GGG | - | chr3_4:77683442-77683461 | None:intergenic | 35.0% | |
| GTAGATCCAGAATCAGAAAT+TGG | - | chr3_4:77683446-77683465 | None:intergenic | 35.0% | |
| TAGTAGAAACACATGAGACT+AGG | - | chr3_4:77683495-77683514 | None:intergenic | 35.0% | |
| !! | TATGTCAAGTTGCGTTTTGA+AGG | + | chr3_4:77683678-77683697 | Msa0524180:intron | 35.0% |
| ! | ATTAGGAGAGTCTGTAGTTT+TGG | - | chr3_4:77683903-77683922 | None:intergenic | 35.0% |
| AGGCACTAAGAAACATTTAG+GGG | - | chr3_4:77683952-77683971 | None:intergenic | 35.0% | |
| AAATGTAGCTGTGATAGGAT+AGG | - | chr3_4:77683972-77683991 | None:intergenic | 35.0% | |
| !!! | TTCTTTTGTTTTCTGGTTGG+GGG | + | chr3_4:77683990-77684009 | Msa0524180:intron | 35.0% |
| ! | TTGCAGGTTTTTGATCTGTA+TGG | + | chr3_4:77684103-77684122 | Msa0524180:intron | 35.0% |
| ! | GTTTTTGATCTGTATGGAGT+TGG | + | chr3_4:77684109-77684128 | Msa0524180:CDS | 35.0% |
| ACATGTGATGTCAAGGAATT+TGG | - | chr3_4:77684557-77684576 | None:intergenic | 35.0% | |
| TGACAAAACATGTGATGTCA+AGG | - | chr3_4:77684564-77684583 | None:intergenic | 35.0% | |
| !! | TGATTGTCTTGGCTTTGATT+AGG | + | chr3_4:77684691-77684710 | Msa0524180:intron | 35.0% |
| ! | TAGCTGAATTTGTTCATGTC+AGG | - | chr3_4:77684854-77684873 | None:intergenic | 35.0% |
| CAGTTTAAACTATCCCAAGA+AGG | - | chr3_4:77685178-77685197 | None:intergenic | 35.0% | |
| TCTAACACACTGACACATAT+CGG | - | chr3_4:77685272-77685291 | None:intergenic | 35.0% | |
| TAATATATTGACACCGACAC+CGG | - | chr3_4:77685356-77685375 | None:intergenic | 35.0% | |
| ATACGTGCAAATATGGTTGA+AGG | - | chr3_4:77685515-77685534 | None:intergenic | 35.0% | |
| TGATGCAACTGTCAAAGATA+TGG | + | chr3_4:77685608-77685627 | Msa0524180:CDS | 35.0% | |
| CCCTGTGGAATATTTAACAA+AGG | - | chr3_4:77685808-77685827 | None:intergenic | 35.0% | |
| GCTGTGACTGATATTATTGA+CGG | + | chr3_4:77685883-77685902 | Msa0524180:CDS | 35.0% | |
| ! | TTACAGCAGCCAAATTTTGT+AGG | - | chr3_4:77685933-77685952 | None:intergenic | 35.0% |
| GTTGTACACTACCAATTGAT+TGG | + | chr3_4:77686071-77686090 | Msa0524180:three_prime_UTR | 35.0% | |
| GAAAAGAAACGAAACAGAGT+TGG | + | chr3_4:77682230-77682249 | Msa0524180:five_prime_UTR | 35.0% | |
| !! | GTTGGAAATGGGTTTTTCAT+CGG | - | chr3_4:77682303-77682322 | None:intergenic | 35.0% |
| ACTATGACGATGTTGGAAAT+GGG | - | chr3_4:77682314-77682333 | None:intergenic | 35.0% | |
| AAAAAGACTAACGGAGAGTT+AGG | - | chr3_4:77682485-77682504 | None:intergenic | 35.0% | |
| !! | ATTGATTCCAGTTTTCCAGA+AGG | + | chr3_4:77682567-77682586 | Msa0524180:intron | 35.0% |
| !! | AATTTGAACTTGATTTGGCC+TGG | + | chr3_4:77682630-77682649 | Msa0524180:CDS | 35.0% |
| ! | CTGGTAAAGATCCTTCTTTT+GGG | + | chr3_4:77682649-77682668 | Msa0524180:CDS | 35.0% |
| ! | TGGTAAAGATCCTTCTTTTG+GGG | + | chr3_4:77682650-77682669 | Msa0524180:CDS | 35.0% |
| CCAGCATTAATGATCAAATC+AGG | - | chr3_4:77682738-77682757 | None:intergenic | 35.0% | |
| ! | CCTGATTTGATCATTAATGC+TGG | + | chr3_4:77682735-77682754 | Msa0524180:CDS | 35.0% |
| GGATTTAGACTTACAGGAAT+GGG | - | chr3_4:77682846-77682865 | None:intergenic | 35.0% | |
| AGGATTTAGACTTACAGGAA+TGG | - | chr3_4:77682847-77682866 | None:intergenic | 35.0% | |
| CGATGGTCTTCTTAAAATTC+TGG | - | chr3_4:77683358-77683377 | None:intergenic | 35.0% | |
| ATCCAGAATCAGAAATTGGT+GGG | - | chr3_4:77683442-77683461 | None:intergenic | 35.0% | |
| GTAGATCCAGAATCAGAAAT+TGG | - | chr3_4:77683446-77683465 | None:intergenic | 35.0% | |
| TAGTAGAAACACATGAGACT+AGG | - | chr3_4:77683495-77683514 | None:intergenic | 35.0% | |
| !! | TATGTCAAGTTGCGTTTTGA+AGG | + | chr3_4:77683678-77683697 | Msa0524180:intron | 35.0% |
| ! | ATTAGGAGAGTCTGTAGTTT+TGG | - | chr3_4:77683903-77683922 | None:intergenic | 35.0% |
| AGGCACTAAGAAACATTTAG+GGG | - | chr3_4:77683952-77683971 | None:intergenic | 35.0% | |
| AAATGTAGCTGTGATAGGAT+AGG | - | chr3_4:77683972-77683991 | None:intergenic | 35.0% | |
| !!! | TTCTTTTGTTTTCTGGTTGG+GGG | + | chr3_4:77683990-77684009 | Msa0524180:intron | 35.0% |
| ! | TTGCAGGTTTTTGATCTGTA+TGG | + | chr3_4:77684103-77684122 | Msa0524180:intron | 35.0% |
| ! | GTTTTTGATCTGTATGGAGT+TGG | + | chr3_4:77684109-77684128 | Msa0524180:CDS | 35.0% |
| ACATGTGATGTCAAGGAATT+TGG | - | chr3_4:77684557-77684576 | None:intergenic | 35.0% | |
| TGACAAAACATGTGATGTCA+AGG | - | chr3_4:77684564-77684583 | None:intergenic | 35.0% | |
| !! | TGATTGTCTTGGCTTTGATT+AGG | + | chr3_4:77684691-77684710 | Msa0524180:intron | 35.0% |
| ! | TAGCTGAATTTGTTCATGTC+AGG | - | chr3_4:77684854-77684873 | None:intergenic | 35.0% |
| CAGTTTAAACTATCCCAAGA+AGG | - | chr3_4:77685178-77685197 | None:intergenic | 35.0% | |
| TCTAACACACTGACACATAT+CGG | - | chr3_4:77685272-77685291 | None:intergenic | 35.0% | |
| TAATATATTGACACCGACAC+CGG | - | chr3_4:77685356-77685375 | None:intergenic | 35.0% | |
| ATACGTGCAAATATGGTTGA+AGG | - | chr3_4:77685515-77685534 | None:intergenic | 35.0% | |
| TGATGCAACTGTCAAAGATA+TGG | + | chr3_4:77685608-77685627 | Msa0524180:CDS | 35.0% | |
| CCCTGTGGAATATTTAACAA+AGG | - | chr3_4:77685808-77685827 | None:intergenic | 35.0% | |
| GCTGTGACTGATATTATTGA+CGG | + | chr3_4:77685883-77685902 | Msa0524180:CDS | 35.0% | |
| ! | TTACAGCAGCCAAATTTTGT+AGG | - | chr3_4:77685933-77685952 | None:intergenic | 35.0% |
| GTTGTACACTACCAATTGAT+TGG | + | chr3_4:77686071-77686090 | Msa0524180:three_prime_UTR | 35.0% | |
| AAACAGAGTTGGACTGCAAA+TGG | + | chr3_4:77682241-77682260 | Msa0524180:exon | 40.0% | |
| GACTATGACGATGTTGGAAA+TGG | - | chr3_4:77682315-77682334 | None:intergenic | 40.0% | |
| TCCAACATCGTCATAGTCAT+TGG | + | chr3_4:77682317-77682336 | Msa0524180:CDS | 40.0% | |
| ACCAATGACTATGACGATGT+TGG | - | chr3_4:77682321-77682340 | None:intergenic | 40.0% | |
| TCTGCATAGCTGATATTGGA+GGG | - | chr3_4:77682418-77682437 | None:intergenic | 40.0% | |
| TCCAATATCAGCTATGCAGA+CGG | + | chr3_4:77682418-77682437 | Msa0524180:intron | 40.0% | |
| !!! | TTTTCCAGAAGGTGTTCCTT+GGG | + | chr3_4:77682578-77682597 | Msa0524180:CDS | 40.0% |
| ! | TTTCCATGATAACGTACCCA+AGG | - | chr3_4:77682597-77682616 | None:intergenic | 40.0% |
| CCAAAAGAAGGATCTTTACC+AGG | - | chr3_4:77682651-77682670 | None:intergenic | 40.0% | |
| ! | CCTGGTAAAGATCCTTCTTT+TGG | + | chr3_4:77682648-77682667 | Msa0524180:CDS | 40.0% |
| TGTAACAAGAGCAGAGGATA+TGG | - | chr3_4:77682691-77682710 | None:intergenic | 40.0% | |
| AGCATATGTAACAAGAGCAG+AGG | - | chr3_4:77682697-77682716 | None:intergenic | 40.0% | |
| TTATCCTTCAGATTGGGAAG+TGG | + | chr3_4:77682905-77682924 | Msa0524180:intron | 40.0% | |
| TATCCTTCAGATTGGGAAGT+GGG | + | chr3_4:77682906-77682925 | Msa0524180:intron | 40.0% | |
| AGGATGTAACAATCCGTGTT+AGG | - | chr3_4:77682936-77682955 | None:intergenic | 40.0% | |
| AAATTCTGGGTTTGTGGGTT+GGG | - | chr3_4:77683344-77683363 | None:intergenic | 40.0% | |
| AAAATTCTGGGTTTGTGGGT+TGG | - | chr3_4:77683345-77683364 | None:intergenic | 40.0% | |
| GATCCAGAATCAGAAATTGG+TGG | - | chr3_4:77683443-77683462 | None:intergenic | 40.0% | |
| TACAAGGTTGGGTGTTTCAA+AGG | - | chr3_4:77684146-77684165 | None:intergenic | 40.0% | |
| TGAAACACCCAACCTTGTAA+AGG | + | chr3_4:77684147-77684166 | Msa0524180:CDS | 40.0% | |
| AGGTTACATCACATGTTTGC+GGG | - | chr3_4:77684443-77684462 | None:intergenic | 40.0% | |
| GAGGTTACATCACATGTTTG+CGG | - | chr3_4:77684444-77684463 | None:intergenic | 40.0% | |
| GTAACCTCCAATTGTTACAC+AGG | + | chr3_4:77684456-77684475 | Msa0524180:intron | 40.0% | |
| TAAGCCTGTGTAACAATTGG+AGG | - | chr3_4:77684463-77684482 | None:intergenic | 40.0% | |
| AGGTAAGCCTGTGTAACAAT+TGG | - | chr3_4:77684466-77684485 | None:intergenic | 40.0% | |
| CAGTTCTTCTGGGTAAACAA+TGG | - | chr3_4:77684600-77684619 | None:intergenic | 40.0% | |
| CATTGTTTACCCAGAAGAAC+TGG | + | chr3_4:77684598-77684617 | Msa0524180:intron | 40.0% | |
| TCCTTCAATCCAGTTCTTCT+GGG | - | chr3_4:77684610-77684629 | None:intergenic | 40.0% | |
| !! | GAAAATTTATGGTGCCACCA+GGG | + | chr3_4:77685021-77685040 | Msa0524180:intron | 40.0% |
| !! | AAAATTTATGGTGCCACCAG+GGG | + | chr3_4:77685022-77685041 | Msa0524180:intron | 40.0% |
| AAAATAACAGCCAAAACCCC+TGG | - | chr3_4:77685041-77685060 | None:intergenic | 40.0% | |
| ! | AAACTATCCCAAGAAGGTAC+TGG | - | chr3_4:77685172-77685191 | None:intergenic | 40.0% |
| CCATATCCTGCACGTAAATT+GGG | - | chr3_4:77685204-77685223 | None:intergenic | 40.0% | |
| TCCATATCCTGCACGTAAAT+TGG | - | chr3_4:77685205-77685224 | None:intergenic | 40.0% | |
| GCACAGACGCATTAGATTAA+AGG | + | chr3_4:77685236-77685255 | Msa0524180:intron | 40.0% | |
| !! | CGCATTAGATTAAAGGTGTC+TGG | + | chr3_4:77685243-77685262 | Msa0524180:intron | 40.0% |
| ACCATATTTGCACGTATTCC+AGG | + | chr3_4:77685518-77685537 | Msa0524180:intron | 40.0% | |
| ACCTGGAATACGTGCAAATA+TGG | - | chr3_4:77685522-77685541 | None:intergenic | 40.0% | |
| ATATTTGCACGTATTCCAGG+TGG | + | chr3_4:77685521-77685540 | Msa0524180:intron | 40.0% | |
| ! | GTGATTGATGATTCATCCTG+CGG | - | chr3_4:77685582-77685601 | None:intergenic | 40.0% |
| GCAGGATGAATCATCAATCA+CGG | + | chr3_4:77685581-77685600 | Msa0524180:CDS | 40.0% | |
| TGCAACTGTCAAAGATATGG+AGG | + | chr3_4:77685611-77685630 | Msa0524180:CDS | 40.0% | |
| ! | ATATGGAGGTATGCAGTACA+TGG | + | chr3_4:77685625-77685644 | Msa0524180:intron | 40.0% |
| !!! | GTTTTCTAGAGCTTCGAAGT+TGG | + | chr3_4:77685651-77685670 | Msa0524180:intron | 40.0% |
| AGCTTCGAAGTTGGAACATT+TGG | + | chr3_4:77685660-77685679 | Msa0524180:intron | 40.0% | |
| CGAACAACTGTCAGTTACTT+AGG | - | chr3_4:77685774-77685793 | None:intergenic | 40.0% | |
| TGTAGGAATTCTTCAGCAGT+TGG | - | chr3_4:77685916-77685935 | None:intergenic | 40.0% | |
| TGTAACTTCTGCACTTGATC+TGG | + | chr3_4:77685948-77685967 | Msa0524180:CDS | 40.0% | |
| AAACAGAGTTGGACTGCAAA+TGG | + | chr3_4:77682241-77682260 | Msa0524180:exon | 40.0% | |
| GACTATGACGATGTTGGAAA+TGG | - | chr3_4:77682315-77682334 | None:intergenic | 40.0% | |
| TCCAACATCGTCATAGTCAT+TGG | + | chr3_4:77682317-77682336 | Msa0524180:CDS | 40.0% | |
| ACCAATGACTATGACGATGT+TGG | - | chr3_4:77682321-77682340 | None:intergenic | 40.0% | |
| TCTGCATAGCTGATATTGGA+GGG | - | chr3_4:77682418-77682437 | None:intergenic | 40.0% | |
| TCCAATATCAGCTATGCAGA+CGG | + | chr3_4:77682418-77682437 | Msa0524180:intron | 40.0% | |
| !!! | TTTTCCAGAAGGTGTTCCTT+GGG | + | chr3_4:77682578-77682597 | Msa0524180:CDS | 40.0% |
| ! | TTTCCATGATAACGTACCCA+AGG | - | chr3_4:77682597-77682616 | None:intergenic | 40.0% |
| CCAAAAGAAGGATCTTTACC+AGG | - | chr3_4:77682651-77682670 | None:intergenic | 40.0% | |
| ! | CCTGGTAAAGATCCTTCTTT+TGG | + | chr3_4:77682648-77682667 | Msa0524180:CDS | 40.0% |
| TGTAACAAGAGCAGAGGATA+TGG | - | chr3_4:77682691-77682710 | None:intergenic | 40.0% | |
| AGCATATGTAACAAGAGCAG+AGG | - | chr3_4:77682697-77682716 | None:intergenic | 40.0% | |
| TTATCCTTCAGATTGGGAAG+TGG | + | chr3_4:77682905-77682924 | Msa0524180:intron | 40.0% | |
| TATCCTTCAGATTGGGAAGT+GGG | + | chr3_4:77682906-77682925 | Msa0524180:intron | 40.0% | |
| AGGATGTAACAATCCGTGTT+AGG | - | chr3_4:77682936-77682955 | None:intergenic | 40.0% | |
| AAATTCTGGGTTTGTGGGTT+GGG | - | chr3_4:77683344-77683363 | None:intergenic | 40.0% | |
| AAAATTCTGGGTTTGTGGGT+TGG | - | chr3_4:77683345-77683364 | None:intergenic | 40.0% | |
| GATCCAGAATCAGAAATTGG+TGG | - | chr3_4:77683443-77683462 | None:intergenic | 40.0% | |
| TACAAGGTTGGGTGTTTCAA+AGG | - | chr3_4:77684146-77684165 | None:intergenic | 40.0% | |
| TGAAACACCCAACCTTGTAA+AGG | + | chr3_4:77684147-77684166 | Msa0524180:CDS | 40.0% | |
| AGGTTACATCACATGTTTGC+GGG | - | chr3_4:77684443-77684462 | None:intergenic | 40.0% | |
| GAGGTTACATCACATGTTTG+CGG | - | chr3_4:77684444-77684463 | None:intergenic | 40.0% | |
| GTAACCTCCAATTGTTACAC+AGG | + | chr3_4:77684456-77684475 | Msa0524180:intron | 40.0% | |
| TAAGCCTGTGTAACAATTGG+AGG | - | chr3_4:77684463-77684482 | None:intergenic | 40.0% | |
| AGGTAAGCCTGTGTAACAAT+TGG | - | chr3_4:77684466-77684485 | None:intergenic | 40.0% | |
| CAGTTCTTCTGGGTAAACAA+TGG | - | chr3_4:77684600-77684619 | None:intergenic | 40.0% | |
| CATTGTTTACCCAGAAGAAC+TGG | + | chr3_4:77684598-77684617 | Msa0524180:intron | 40.0% | |
| TCCTTCAATCCAGTTCTTCT+GGG | - | chr3_4:77684610-77684629 | None:intergenic | 40.0% | |
| !! | GAAAATTTATGGTGCCACCA+GGG | + | chr3_4:77685021-77685040 | Msa0524180:intron | 40.0% |
| !! | AAAATTTATGGTGCCACCAG+GGG | + | chr3_4:77685022-77685041 | Msa0524180:intron | 40.0% |
| AAAATAACAGCCAAAACCCC+TGG | - | chr3_4:77685041-77685060 | None:intergenic | 40.0% | |
| ! | AAACTATCCCAAGAAGGTAC+TGG | - | chr3_4:77685172-77685191 | None:intergenic | 40.0% |
| CCATATCCTGCACGTAAATT+GGG | - | chr3_4:77685204-77685223 | None:intergenic | 40.0% | |
| TCCATATCCTGCACGTAAAT+TGG | - | chr3_4:77685205-77685224 | None:intergenic | 40.0% | |
| GCACAGACGCATTAGATTAA+AGG | + | chr3_4:77685236-77685255 | Msa0524180:intron | 40.0% | |
| !! | CGCATTAGATTAAAGGTGTC+TGG | + | chr3_4:77685243-77685262 | Msa0524180:intron | 40.0% |
| ACCATATTTGCACGTATTCC+AGG | + | chr3_4:77685518-77685537 | Msa0524180:intron | 40.0% | |
| ACCTGGAATACGTGCAAATA+TGG | - | chr3_4:77685522-77685541 | None:intergenic | 40.0% | |
| ATATTTGCACGTATTCCAGG+TGG | + | chr3_4:77685521-77685540 | Msa0524180:intron | 40.0% | |
| ! | GTGATTGATGATTCATCCTG+CGG | - | chr3_4:77685582-77685601 | None:intergenic | 40.0% |
| GCAGGATGAATCATCAATCA+CGG | + | chr3_4:77685581-77685600 | Msa0524180:CDS | 40.0% | |
| TGCAACTGTCAAAGATATGG+AGG | + | chr3_4:77685611-77685630 | Msa0524180:CDS | 40.0% | |
| ! | ATATGGAGGTATGCAGTACA+TGG | + | chr3_4:77685625-77685644 | Msa0524180:intron | 40.0% |
| !!! | GTTTTCTAGAGCTTCGAAGT+TGG | + | chr3_4:77685651-77685670 | Msa0524180:intron | 40.0% |
| AGCTTCGAAGTTGGAACATT+TGG | + | chr3_4:77685660-77685679 | Msa0524180:intron | 40.0% | |
| CGAACAACTGTCAGTTACTT+AGG | - | chr3_4:77685774-77685793 | None:intergenic | 40.0% | |
| TGTAGGAATTCTTCAGCAGT+TGG | - | chr3_4:77685916-77685935 | None:intergenic | 40.0% | |
| TGTAACTTCTGCACTTGATC+TGG | + | chr3_4:77685948-77685967 | Msa0524180:CDS | 40.0% | |
| !! | GGAAATGGGTTTTTCATCGG+CGG | - | chr3_4:77682300-77682319 | None:intergenic | 45.0% |
| GTCTGCATAGCTGATATTGG+AGG | - | chr3_4:77682419-77682438 | None:intergenic | 45.0% | |
| TCCGTCTGCATAGCTGATAT+TGG | - | chr3_4:77682422-77682441 | None:intergenic | 45.0% | |
| AATATCAGCTATGCAGACGG+AGG | + | chr3_4:77682421-77682440 | Msa0524180:intron | 45.0% | |
| CTAACGGAGAGTTAGGATCT+TGG | - | chr3_4:77682478-77682497 | None:intergenic | 45.0% | |
| ! | AGGAACACCTTCTGGAAAAC+TGG | - | chr3_4:77682577-77682596 | None:intergenic | 45.0% |
| !!! | GTTTTCCAGAAGGTGTTCCT+TGG | + | chr3_4:77682577-77682596 | Msa0524180:intron | 45.0% |
| GTTCCTTGGGTACGTTATCA+TGG | + | chr3_4:77682591-77682610 | Msa0524180:CDS | 45.0% | |
| ACACTGTCAACCCCAAAAGA+AGG | - | chr3_4:77682663-77682682 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGGGTTGACAGTGT+TGG | + | chr3_4:77682663-77682682 | Msa0524180:CDS | 45.0% |
| ATCATTAATGCTGGCACTGC+TGG | + | chr3_4:77682744-77682763 | Msa0524180:CDS | 45.0% | |
| ATCCTTCAGATTGGGAAGTG+GGG | + | chr3_4:77682907-77682926 | Msa0524180:intron | 45.0% | |
| ACAGTCGAGGGTTGTTGTAT+CGG | + | chr3_4:77683080-77683099 | Msa0524180:intron | 45.0% | |
| TGTATCGGGTGAGAAGGAAA+AGG | + | chr3_4:77683095-77683114 | Msa0524180:intron | 45.0% | |
| ATCTGGGCGTATCACTTCAT+TGG | + | chr3_4:77683174-77683193 | Msa0524180:intron | 45.0% | |
| TCTGGGCGTATCACTTCATT+GGG | + | chr3_4:77683175-77683194 | Msa0524180:intron | 45.0% | |
| GCAGCGAAAACACATGAAAG+CGG | - | chr3_4:77683406-77683425 | None:intergenic | 45.0% | |
| ! | ATGTGTTTTCGCTGCGATAC+CGG | + | chr3_4:77683411-77683430 | Msa0524180:intron | 45.0% |
| CTCCCACCAATTTCTGATTC+TGG | + | chr3_4:77683437-77683456 | Msa0524180:intron | 45.0% | |
| !!! | TTTGTTTTCTGGTTGGGGGA+AGG | + | chr3_4:77683994-77684013 | Msa0524180:intron | 45.0% |
| CACACACACTACTCAAGCAA+TGG | - | chr3_4:77684265-77684284 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTCTAA+CGG | + | chr3_4:77684310-77684329 | Msa0524180:intron | 45.0% | |
| ! | AGCTGGTAATGTATAGCTCC+TGG | + | chr3_4:77684335-77684354 | Msa0524180:intron | 45.0% |
| ! | GCTGGTAATGTATAGCTCCT+GGG | + | chr3_4:77684336-77684355 | Msa0524180:intron | 45.0% |
| GGAAGGGTTAGATCCATTGT+AGG | + | chr3_4:77684373-77684392 | Msa0524180:intron | 45.0% | |
| ACCCAGAAGAACTGGATTGA+AGG | + | chr3_4:77684606-77684625 | Msa0524180:intron | 45.0% | |
| GTCCTTCAATCCAGTTCTTC+TGG | - | chr3_4:77684611-77684630 | None:intergenic | 45.0% | |
| !! | GGAAAATTTATGGTGCCACC+AGG | + | chr3_4:77685020-77685039 | Msa0524180:intron | 45.0% |
| AAGGTAGACCAGTACCTTCT+TGG | + | chr3_4:77685161-77685180 | Msa0524180:intron | 45.0% | |
| AGGTAGACCAGTACCTTCTT+GGG | + | chr3_4:77685162-77685181 | Msa0524180:intron | 45.0% | |
| CTGAAACCCAATTTACGTGC+AGG | + | chr3_4:77685195-77685214 | Msa0524180:intron | 45.0% | |
| CCCAATTTACGTGCAGGATA+TGG | + | chr3_4:77685201-77685220 | Msa0524180:intron | 45.0% | |
| GTTAGACACCAACACAACAC+CGG | + | chr3_4:77685286-77685305 | Msa0524180:intron | 45.0% | |
| !! | TACATATGCCGGTGTTGTGT+TGG | - | chr3_4:77685297-77685316 | None:intergenic | 45.0% |
| CAGTAGACAATTTAGCCACC+TGG | - | chr3_4:77685539-77685558 | None:intergenic | 45.0% | |
| CAGGTGGCTAAATTGTCTAC+TGG | + | chr3_4:77685537-77685556 | Msa0524180:intron | 45.0% | |
| CTCTTTAGATATGACACCGC+AGG | + | chr3_4:77685563-77685582 | Msa0524180:CDS | 45.0% | |
| CAATATTGGCCACAAGAGAG+TGG | - | chr3_4:77686164-77686183 | None:intergenic | 45.0% | |
| !! | GGAAATGGGTTTTTCATCGG+CGG | - | chr3_4:77682300-77682319 | None:intergenic | 45.0% |
| GTCTGCATAGCTGATATTGG+AGG | - | chr3_4:77682419-77682438 | None:intergenic | 45.0% | |
| TCCGTCTGCATAGCTGATAT+TGG | - | chr3_4:77682422-77682441 | None:intergenic | 45.0% | |
| AATATCAGCTATGCAGACGG+AGG | + | chr3_4:77682421-77682440 | Msa0524180:intron | 45.0% | |
| CTAACGGAGAGTTAGGATCT+TGG | - | chr3_4:77682478-77682497 | None:intergenic | 45.0% | |
| ! | AGGAACACCTTCTGGAAAAC+TGG | - | chr3_4:77682577-77682596 | None:intergenic | 45.0% |
| !!! | GTTTTCCAGAAGGTGTTCCT+TGG | + | chr3_4:77682577-77682596 | Msa0524180:intron | 45.0% |
| GTTCCTTGGGTACGTTATCA+TGG | + | chr3_4:77682591-77682610 | Msa0524180:CDS | 45.0% | |
| ACACTGTCAACCCCAAAAGA+AGG | - | chr3_4:77682663-77682682 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGGGTTGACAGTGT+TGG | + | chr3_4:77682663-77682682 | Msa0524180:CDS | 45.0% |
| ATCATTAATGCTGGCACTGC+TGG | + | chr3_4:77682744-77682763 | Msa0524180:CDS | 45.0% | |
| ATCCTTCAGATTGGGAAGTG+GGG | + | chr3_4:77682907-77682926 | Msa0524180:intron | 45.0% | |
| ACAGTCGAGGGTTGTTGTAT+CGG | + | chr3_4:77683080-77683099 | Msa0524180:intron | 45.0% | |
| TGTATCGGGTGAGAAGGAAA+AGG | + | chr3_4:77683095-77683114 | Msa0524180:intron | 45.0% | |
| ATCTGGGCGTATCACTTCAT+TGG | + | chr3_4:77683174-77683193 | Msa0524180:intron | 45.0% | |
| TCTGGGCGTATCACTTCATT+GGG | + | chr3_4:77683175-77683194 | Msa0524180:intron | 45.0% | |
| GCAGCGAAAACACATGAAAG+CGG | - | chr3_4:77683406-77683425 | None:intergenic | 45.0% | |
| ! | ATGTGTTTTCGCTGCGATAC+CGG | + | chr3_4:77683411-77683430 | Msa0524180:intron | 45.0% |
| CTCCCACCAATTTCTGATTC+TGG | + | chr3_4:77683437-77683456 | Msa0524180:intron | 45.0% | |
| !!! | TTTGTTTTCTGGTTGGGGGA+AGG | + | chr3_4:77683994-77684013 | Msa0524180:intron | 45.0% |
| CACACACACTACTCAAGCAA+TGG | - | chr3_4:77684265-77684284 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTCTAA+CGG | + | chr3_4:77684310-77684329 | Msa0524180:intron | 45.0% | |
| ! | AGCTGGTAATGTATAGCTCC+TGG | + | chr3_4:77684335-77684354 | Msa0524180:intron | 45.0% |
| ! | GCTGGTAATGTATAGCTCCT+GGG | + | chr3_4:77684336-77684355 | Msa0524180:intron | 45.0% |
| GGAAGGGTTAGATCCATTGT+AGG | + | chr3_4:77684373-77684392 | Msa0524180:intron | 45.0% | |
| ACCCAGAAGAACTGGATTGA+AGG | + | chr3_4:77684606-77684625 | Msa0524180:intron | 45.0% | |
| GTCCTTCAATCCAGTTCTTC+TGG | - | chr3_4:77684611-77684630 | None:intergenic | 45.0% | |
| !! | GGAAAATTTATGGTGCCACC+AGG | + | chr3_4:77685020-77685039 | Msa0524180:intron | 45.0% |
| AAGGTAGACCAGTACCTTCT+TGG | + | chr3_4:77685161-77685180 | Msa0524180:intron | 45.0% | |
| AGGTAGACCAGTACCTTCTT+GGG | + | chr3_4:77685162-77685181 | Msa0524180:intron | 45.0% | |
| CTGAAACCCAATTTACGTGC+AGG | + | chr3_4:77685195-77685214 | Msa0524180:intron | 45.0% | |
| CCCAATTTACGTGCAGGATA+TGG | + | chr3_4:77685201-77685220 | Msa0524180:intron | 45.0% | |
| GTTAGACACCAACACAACAC+CGG | + | chr3_4:77685286-77685305 | Msa0524180:intron | 45.0% | |
| !! | TACATATGCCGGTGTTGTGT+TGG | - | chr3_4:77685297-77685316 | None:intergenic | 45.0% |
| CAGTAGACAATTTAGCCACC+TGG | - | chr3_4:77685539-77685558 | None:intergenic | 45.0% | |
| CAGGTGGCTAAATTGTCTAC+TGG | + | chr3_4:77685537-77685556 | Msa0524180:intron | 45.0% | |
| CTCTTTAGATATGACACCGC+AGG | + | chr3_4:77685563-77685582 | Msa0524180:CDS | 45.0% | |
| CAATATTGGCCACAAGAGAG+TGG | - | chr3_4:77686164-77686183 | None:intergenic | 45.0% | |
| ATTAATGCTGGCACTGCTGG+TGG | + | chr3_4:77682747-77682766 | Msa0524180:CDS | 50.0% | |
| TCCTTCAGATTGGGAAGTGG+GGG | + | chr3_4:77682908-77682927 | Msa0524180:intron | 50.0% | |
| !! | ACTGTTTCTGGTGGCTGTTG+TGG | - | chr3_4:77683065-77683084 | None:intergenic | 50.0% |
| CAACAACCCTCGACTGTTTC+TGG | - | chr3_4:77683077-77683096 | None:intergenic | 50.0% | |
| CAGTCGAGGGTTGTTGTATC+GGG | + | chr3_4:77683081-77683100 | Msa0524180:intron | 50.0% | |
| GGTTGTTGTATCGGGTGAGA+AGG | + | chr3_4:77683089-77683108 | Msa0524180:intron | 50.0% | |
| GGCGTATCACTTCATTGGGA+AGG | + | chr3_4:77683179-77683198 | Msa0524180:intron | 50.0% | |
| AGAAGACCATCGGAATCGAC+AGG | + | chr3_4:77683366-77683385 | Msa0524180:intron | 50.0% | |
| !! | TGCATTCCTGTCGATTCCGA+TGG | - | chr3_4:77683375-77683394 | None:intergenic | 50.0% |
| GCGAAAACACATGAAAGCGG+TGG | - | chr3_4:77683403-77683422 | None:intergenic | 50.0% | |
| GATCTACTCAAGCACGCAGA+TGG | + | chr3_4:77683459-77683478 | Msa0524180:intron | 50.0% | |
| !!! | GGAGAGTCTGTAGTTTTGGC+AGG | - | chr3_4:77683899-77683918 | None:intergenic | 50.0% |
| CGTGCATGCCAAAATCTGCT+CGG | + | chr3_4:77684022-77684041 | Msa0524180:intron | 50.0% | |
| !!! | TGCAAGCACCGAGCAGATTT+TGG | - | chr3_4:77684033-77684052 | None:intergenic | 50.0% |
| ! | TCGGTGCTTGCAATGTTGTG+CGG | + | chr3_4:77684041-77684060 | Msa0524180:intron | 50.0% |
| GTGTGTGTCTAACGGTAAGC+TGG | + | chr3_4:77684318-77684337 | Msa0524180:intron | 50.0% | |
| GTATAGCTCCTGGGATAGCA+TGG | + | chr3_4:77684345-77684364 | Msa0524180:intron | 50.0% | |
| TCCTGGGATAGCATGGTCTA+GGG | + | chr3_4:77684352-77684371 | Msa0524180:intron | 50.0% | |
| GGATAGCATGGTCTAGGGAA+GGG | + | chr3_4:77684357-77684376 | Msa0524180:intron | 50.0% | |
| ATAACAGCCAAAACCCCTGG+TGG | - | chr3_4:77685038-77685057 | None:intergenic | 50.0% | |
| ACTTGATCTGGCTGTCGAAC+AGG | + | chr3_4:77685960-77685979 | Msa0524180:CDS | 50.0% | |
| CCACAAGAGAGTGGTATGGT+TGG | - | chr3_4:77686155-77686174 | None:intergenic | 50.0% | |
| CCAACCATACCACTCTCTTG+TGG | + | chr3_4:77686152-77686171 | Msa0524180:three_prime_UTR | 50.0% | |
| TTGGCCACAAGAGAGTGGTA+TGG | - | chr3_4:77686159-77686178 | None:intergenic | 50.0% | |
| ATTAATGCTGGCACTGCTGG+TGG | + | chr3_4:77682747-77682766 | Msa0524180:CDS | 50.0% | |
| TCCTTCAGATTGGGAAGTGG+GGG | + | chr3_4:77682908-77682927 | Msa0524180:intron | 50.0% | |
| !! | ACTGTTTCTGGTGGCTGTTG+TGG | - | chr3_4:77683065-77683084 | None:intergenic | 50.0% |
| CAACAACCCTCGACTGTTTC+TGG | - | chr3_4:77683077-77683096 | None:intergenic | 50.0% | |
| CAGTCGAGGGTTGTTGTATC+GGG | + | chr3_4:77683081-77683100 | Msa0524180:intron | 50.0% | |
| GGTTGTTGTATCGGGTGAGA+AGG | + | chr3_4:77683089-77683108 | Msa0524180:intron | 50.0% | |
| GGCGTATCACTTCATTGGGA+AGG | + | chr3_4:77683179-77683198 | Msa0524180:intron | 50.0% | |
| AGAAGACCATCGGAATCGAC+AGG | + | chr3_4:77683366-77683385 | Msa0524180:intron | 50.0% | |
| !! | TGCATTCCTGTCGATTCCGA+TGG | - | chr3_4:77683375-77683394 | None:intergenic | 50.0% |
| GCGAAAACACATGAAAGCGG+TGG | - | chr3_4:77683403-77683422 | None:intergenic | 50.0% | |
| GATCTACTCAAGCACGCAGA+TGG | + | chr3_4:77683459-77683478 | Msa0524180:intron | 50.0% | |
| !!! | GGAGAGTCTGTAGTTTTGGC+AGG | - | chr3_4:77683899-77683918 | None:intergenic | 50.0% |
| CGTGCATGCCAAAATCTGCT+CGG | + | chr3_4:77684022-77684041 | Msa0524180:intron | 50.0% | |
| !!! | TGCAAGCACCGAGCAGATTT+TGG | - | chr3_4:77684033-77684052 | None:intergenic | 50.0% |
| ! | TCGGTGCTTGCAATGTTGTG+CGG | + | chr3_4:77684041-77684060 | Msa0524180:intron | 50.0% |
| GTGTGTGTCTAACGGTAAGC+TGG | + | chr3_4:77684318-77684337 | Msa0524180:intron | 50.0% | |
| GTATAGCTCCTGGGATAGCA+TGG | + | chr3_4:77684345-77684364 | Msa0524180:intron | 50.0% | |
| TCCTGGGATAGCATGGTCTA+GGG | + | chr3_4:77684352-77684371 | Msa0524180:intron | 50.0% | |
| GGATAGCATGGTCTAGGGAA+GGG | + | chr3_4:77684357-77684376 | Msa0524180:intron | 50.0% | |
| ATAACAGCCAAAACCCCTGG+TGG | - | chr3_4:77685038-77685057 | None:intergenic | 50.0% | |
| ACTTGATCTGGCTGTCGAAC+AGG | + | chr3_4:77685960-77685979 | Msa0524180:CDS | 50.0% | |
| CCACAAGAGAGTGGTATGGT+TGG | - | chr3_4:77686155-77686174 | None:intergenic | 50.0% | |
| CCAACCATACCACTCTCTTG+TGG | + | chr3_4:77686152-77686171 | Msa0524180:three_prime_UTR | 50.0% | |
| TTGGCCACAAGAGAGTGGTA+TGG | - | chr3_4:77686159-77686178 | None:intergenic | 50.0% | |
| CGTACCCAAGGAACACCTTC+TGG | - | chr3_4:77682585-77682604 | None:intergenic | 55.0% | |
| TCCCCCACTTCCCAATCTGA+AGG | - | chr3_4:77682912-77682931 | None:intergenic | 55.0% | |
| GGAAGTGGGGGATCCTAACA+CGG | + | chr3_4:77682920-77682939 | Msa0524180:intron | 55.0% | |
| !! | GTTTCTGGTGGCTGTTGTGG+AGG | - | chr3_4:77683062-77683081 | None:intergenic | 55.0% |
| ACAGCCACCAGAAACAGTCG+AGG | + | chr3_4:77683067-77683086 | Msa0524180:intron | 55.0% | |
| CAGCCACCAGAAACAGTCGA+GGG | + | chr3_4:77683068-77683087 | Msa0524180:intron | 55.0% | |
| !! | CAACCCTCGACTGTTTCTGG+TGG | - | chr3_4:77683074-77683093 | None:intergenic | 55.0% |
| !! | CAGAAATTGGTGGGAGCGTC+CGG | - | chr3_4:77683433-77683452 | None:intergenic | 55.0% |
| CTCCTGGGATAGCATGGTCT+AGG | + | chr3_4:77684351-77684370 | Msa0524180:intron | 55.0% | |
| TCCCTAGACCATGCTATCCC+AGG | - | chr3_4:77684356-77684375 | None:intergenic | 55.0% | |
| GGGATAGCATGGTCTAGGGA+AGG | + | chr3_4:77684356-77684375 | Msa0524180:intron | 55.0% | |
| !!! | TATGGTGCCACCAGGGGTTT+TGG | + | chr3_4:77685028-77685047 | Msa0524180:intron | 55.0% |
| TAAGCAACAGCTGCTCCCTG+TGG | - | chr3_4:77685823-77685842 | None:intergenic | 55.0% | |
| CGTACCCAAGGAACACCTTC+TGG | - | chr3_4:77682585-77682604 | None:intergenic | 55.0% | |
| TCCCCCACTTCCCAATCTGA+AGG | - | chr3_4:77682912-77682931 | None:intergenic | 55.0% | |
| GGAAGTGGGGGATCCTAACA+CGG | + | chr3_4:77682920-77682939 | Msa0524180:intron | 55.0% | |
| !! | GTTTCTGGTGGCTGTTGTGG+AGG | - | chr3_4:77683062-77683081 | None:intergenic | 55.0% |
| ACAGCCACCAGAAACAGTCG+AGG | + | chr3_4:77683067-77683086 | Msa0524180:intron | 55.0% | |
| CAGCCACCAGAAACAGTCGA+GGG | + | chr3_4:77683068-77683087 | Msa0524180:intron | 55.0% | |
| !! | CAACCCTCGACTGTTTCTGG+TGG | - | chr3_4:77683074-77683093 | None:intergenic | 55.0% |
| !! | CAGAAATTGGTGGGAGCGTC+CGG | - | chr3_4:77683433-77683452 | None:intergenic | 55.0% |
| CTCCTGGGATAGCATGGTCT+AGG | + | chr3_4:77684351-77684370 | Msa0524180:intron | 55.0% | |
| TCCCTAGACCATGCTATCCC+AGG | - | chr3_4:77684356-77684375 | None:intergenic | 55.0% | |
| GGGATAGCATGGTCTAGGGA+AGG | + | chr3_4:77684356-77684375 | Msa0524180:intron | 55.0% | |
| !!! | TATGGTGCCACCAGGGGTTT+TGG | + | chr3_4:77685028-77685047 | Msa0524180:intron | 55.0% |
| TAAGCAACAGCTGCTCCCTG+TGG | - | chr3_4:77685823-77685842 | None:intergenic | 55.0% | |
| TGGCACTGCTGGTGGCTTCA+AGG | + | chr3_4:77682755-77682774 | Msa0524180:CDS | 60.0% | |
| TGCTGGTGGCTTCAAGGCCA+GGG | + | chr3_4:77682761-77682780 | Msa0524180:CDS | 60.0% | |
| AAGGCCAGGGGAGCTACTGT+TGG | + | chr3_4:77682774-77682793 | Msa0524180:CDS | 60.0% | |
| GTCACCAACAGTAGCTCCCC+TGG | - | chr3_4:77682781-77682800 | None:intergenic | 60.0% | |
| !! | TGTGGGTTGGGTTCGCAACC+CGG | - | chr3_4:77683332-77683351 | None:intergenic | 60.0% |
| TGGCACTGCTGGTGGCTTCA+AGG | + | chr3_4:77682755-77682774 | Msa0524180:CDS | 60.0% | |
| TGCTGGTGGCTTCAAGGCCA+GGG | + | chr3_4:77682761-77682780 | Msa0524180:CDS | 60.0% | |
| AAGGCCAGGGGAGCTACTGT+TGG | + | chr3_4:77682774-77682793 | Msa0524180:CDS | 60.0% | |
| GTCACCAACAGTAGCTCCCC+TGG | - | chr3_4:77682781-77682800 | None:intergenic | 60.0% | |
| !! | TGTGGGTTGGGTTCGCAACC+CGG | - | chr3_4:77683332-77683351 | None:intergenic | 60.0% |
| CTGCTGGTGGCTTCAAGGCC+AGG | + | chr3_4:77682760-77682779 | Msa0524180:CDS | 65.0% | |
| GCTGGTGGCTTCAAGGCCAG+GGG | + | chr3_4:77682762-77682781 | Msa0524180:CDS | 65.0% | |
| CTGCTGGTGGCTTCAAGGCC+AGG | + | chr3_4:77682760-77682779 | Msa0524180:CDS | 65.0% | |
| GCTGGTGGCTTCAAGGCCAG+GGG | + | chr3_4:77682762-77682781 | Msa0524180:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 77682140 | 77686256 | 77682140 | ID=Msa0524180;Name=Msa0524180 |
| chr3_4 | mRNA | 77682140 | 77686256 | 77682140 | ID=Msa0524180-mRNA-1;Parent=Msa0524180;Name=Msa0524180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=120|1|1|1|1|1|6|233|260 |
| chr3_4 | exon | 77682140 | 77682338 | 77682140 | ID=Msa0524180-mRNA-1:exon:22763;Parent=Msa0524180-mRNA-1 |
| chr3_4 | exon | 77682429 | 77682492 | 77682429 | ID=Msa0524180-mRNA-1:exon:22764;Parent=Msa0524180-mRNA-1 |
| chr3_4 | exon | 77682578 | 77682851 | 77682578 | ID=Msa0524180-mRNA-1:exon:22765;Parent=Msa0524180-mRNA-1 |
| chr3_4 | exon | 77684109 | 77684183 | 77684109 | ID=Msa0524180-mRNA-1:exon:22766;Parent=Msa0524180-mRNA-1 |
| chr3_4 | exon | 77685540 | 77685632 | 77685540 | ID=Msa0524180-mRNA-1:exon:22767;Parent=Msa0524180-mRNA-1 |
| chr3_4 | exon | 77685826 | 77686256 | 77685826 | ID=Msa0524180-mRNA-1:exon:22768;Parent=Msa0524180-mRNA-1 |
| chr3_4 | five_prime_UTR | 77682140 | 77682259 | 77682140 | ID=Msa0524180-mRNA-1:five_prime_utr;Parent=Msa0524180-mRNA-1 |
| chr3_4 | CDS | 77682260 | 77682338 | 77682260 | ID=Msa0524180-mRNA-1:cds;Parent=Msa0524180-mRNA-1 |
| chr3_4 | CDS | 77682429 | 77682492 | 77682429 | ID=Msa0524180-mRNA-1:cds;Parent=Msa0524180-mRNA-1 |
| chr3_4 | CDS | 77682578 | 77682851 | 77682578 | ID=Msa0524180-mRNA-1:cds;Parent=Msa0524180-mRNA-1 |
| chr3_4 | CDS | 77684109 | 77684183 | 77684109 | ID=Msa0524180-mRNA-1:cds;Parent=Msa0524180-mRNA-1 |
| chr3_4 | CDS | 77685540 | 77685632 | 77685540 | ID=Msa0524180-mRNA-1:cds;Parent=Msa0524180-mRNA-1 |
| chr3_4 | CDS | 77685826 | 77686023 | 77685826 | ID=Msa0524180-mRNA-1:cds;Parent=Msa0524180-mRNA-1 |
| chr3_4 | three_prime_UTR | 77686024 | 77686256 | 77686024 | ID=Msa0524180-mRNA-1:three_prime_utr;Parent=Msa0524180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
