Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443100 | sp|Q7XA67|MTN2_ARATH | 63.008 | 246 | 91 | 0 | 15 | 260 | 9 | 254 | 4.78e-123 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443100 | G7J8G7 | 95.785 | 261 | 10 | 1 | 1 | 260 | 1 | 261 | 1.18e-178 | 501 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1365070 | Msa1443100 | 0.891027 | 5.777489e-74 | -8.615850e-47 |
| Msa1367360 | Msa1443100 | 0.991374 | 2.601290e-187 | -8.615850e-47 |
| Msa1435750 | Msa1443100 | 0.813816 | 2.113697e-51 | -8.615850e-47 |
| Msa0199690 | Msa1443100 | 0.804431 | 2.167932e-49 | -8.615850e-47 |
| Msa0471590 | Msa1443100 | 0.804157 | 2.471826e-49 | -8.615850e-47 |
| Msa0524180 | Msa1443100 | 0.991737 | 2.912985e-189 | -8.615850e-47 |
| Msa0878980 | Msa1443100 | -0.809691 | 1.669609e-50 | -8.615850e-47 |
| Msa0933290 | Msa1443100 | 0.809309 | 2.016796e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443100 | MtrunA17_Chr3g0145451 | 95.785 | 261 | 10 | 1 | 1 | 260 | 1 | 261 | 0.0 | 501 |
| Msa1443100 | MtrunA17_Chr4g0018461 | 84.946 | 93 | 14 | 0 | 168 | 260 | 1 | 93 | 8.58e-50 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1443100 | AT4G34840.1 | 63.008 | 246 | 91 | 0 | 15 | 260 | 9 | 254 | 4.86e-124 | 353 |
| Msa1443100 | AT4G38800.1 | 61.538 | 260 | 100 | 0 | 1 | 260 | 8 | 267 | 4.90e-122 | 348 |
| Msa1443100 | AT4G34840.2 | 63.948 | 233 | 84 | 0 | 28 | 260 | 1 | 233 | 1.64e-118 | 338 |
| Msa1443100 | AT4G34840.4 | 66.502 | 203 | 68 | 0 | 58 | 260 | 2 | 204 | 5.89e-104 | 300 |
| Msa1443100 | AT4G34840.5 | 61.878 | 181 | 69 | 0 | 15 | 195 | 9 | 189 | 1.82e-88 | 261 |
| Msa1443100 | AT4G34840.3 | 61.878 | 181 | 69 | 0 | 15 | 195 | 9 | 189 | 1.82e-88 | 261 |
Find 63 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAATTCCTACAAAATT+TGG | 0.166272 | tig0030289:+36332 | Msa1443100:CDS |
| CCTGGTAAAGATCCTTCTTT+TGG | 0.203643 | tig0030289:+32859 | Msa1443100:CDS |
| GTCTCAATTTGAACTTGATT+TGG | 0.264829 | tig0030289:+32836 | Msa1443100:CDS |
| ACATGAAACAATATTCGATT+TGG | 0.276638 | tig0030289:+32372 | Msa1443100:five_prime_UTR |
| CTGCTGGTGGCTTCAAGGCC+AGG | 0.284627 | tig0030289:+32971 | Msa1443100:CDS |
| AAAATTGGAAAGATGAAATT+AGG | 0.292361 | tig0030289:-36438 | None:intergenic |
| CGTACCCAAGGAACACCTTC+TGG | 0.300889 | tig0030289:-32793 | None:intergenic |
| TGGCACTGCTGGTGGCTTCA+AGG | 0.343540 | tig0030289:+32966 | Msa1443100:CDS |
| ATGAATGACACATACAATAT+TGG | 0.356948 | tig0030289:-36586 | None:intergenic |
| ATCATTAATGCTGGCACTGC+TGG | 0.358624 | tig0030289:+32955 | Msa1443100:CDS |
| GTTGTACACTACCAATTGAT+TGG | 0.362358 | tig0030289:+36482 | Msa1443100:three_prime_UTR |
| CTCACATATTTCCAATCAAT+TGG | 0.370222 | tig0030289:-36493 | None:intergenic |
| TGTAACAAGAGCAGAGGATA+TGG | 0.391669 | tig0030289:-32899 | None:intergenic |
| TTAAGTTCCTTTACAAGGTT+GGG | 0.394633 | tig0030289:-34589 | None:intergenic |
| TGCTGGTGGCTTCAAGGCCA+GGG | 0.397697 | tig0030289:+32972 | Msa1443100:CDS |
| CATGAAACAATATTCGATTT+GGG | 0.398491 | tig0030289:+32373 | Msa1443100:five_prime_UTR |
| AGCTCAAATTTATTGACAAC+AGG | 0.399480 | tig0030289:-32660 | None:intergenic |
| TGTAACTTCTGCACTTGATC+TGG | 0.402973 | tig0030289:+36359 | Msa1443100:CDS |
| ACTTGATCTGGCTGTCGAAC+AGG | 0.406655 | tig0030289:+36371 | Msa1443100:CDS |
| CCAGCATTAATGATCAAATC+AGG | 0.413935 | tig0030289:-32946 | None:intergenic |
| GACTATGACGATGTTGGAAA+TGG | 0.417905 | tig0030289:-32531 | None:intergenic |
| TCCAACATCGTCATAGTCAT+TGG | 0.422187 | tig0030289:+32536 | Msa1443100:CDS |
| TGATGCAACTGTCAAAGATA+TGG | 0.423834 | tig0030289:+36019 | Msa1443100:CDS |
| GTTCCTTGGGTACGTTATCA+TGG | 0.425081 | tig0030289:+32802 | Msa1443100:CDS |
| ATTAAGTTCCTTTACAAGGT+TGG | 0.433930 | tig0030289:-34590 | None:intergenic |
| GGATTTAGACTTACAGGAAT+GGG | 0.445539 | tig0030289:-33054 | None:intergenic |
| AAACAGAGTTGGACTGCAAA+TGG | 0.458970 | tig0030289:+32460 | Msa1443100:exon |
| TACAAGGTTGGGTGTTTCAA+AGG | 0.482086 | tig0030289:-34578 | None:intergenic |
| CTAACGGAGAGTTAGGATCT+TGG | 0.490412 | tig0030289:-32686 | None:intergenic |
| TGTAAAGGAACTTAATCTAA+AGG | 0.497465 | tig0030289:+34597 | Msa1443100:CDS |
| GAATGGCGATATAAATTAAG+AGG | 0.498221 | tig0030289:-36630 | None:intergenic |
| TGTAGGAATTCTTCAGCAGT+TGG | 0.499721 | tig0030289:-36324 | None:intergenic |
| AATTTGAACTTGATTTGGCC+TGG | 0.507460 | tig0030289:+32841 | Msa1443100:CDS |
| TGAAACACCCAACCTTGTAA+AGG | 0.516673 | tig0030289:+34582 | Msa1443100:CDS |
| TTAGATTAAGTTCCTTTACA+AGG | 0.520921 | tig0030289:-34594 | None:intergenic |
| GTCACCAACAGTAGCTCCCC+TGG | 0.526826 | tig0030289:-32989 | None:intergenic |
| CCTGATTTGATCATTAATGC+TGG | 0.529062 | tig0030289:+32946 | Msa1443100:CDS |
| GAAAAGAAACGAAACAGAGT+TGG | 0.532121 | tig0030289:+32449 | Msa1443100:five_prime_UTR |
| ATTAATGCTGGCACTGCTGG+TGG | 0.533938 | tig0030289:+32958 | Msa1443100:CDS |
| CAGGTGGCTAAATTGTCTAC+TGG | 0.538602 | tig0030289:+35948 | Msa1443100:intron |
| GCTGGTGGCTTCAAGGCCAG+GGG | 0.541743 | tig0030289:+32973 | Msa1443100:CDS |
| AGGATTTAGACTTACAGGAA+TGG | 0.544029 | tig0030289:-33055 | None:intergenic |
| CGTTATCATGGAAAATTCAA+AGG | 0.546606 | tig0030289:+32814 | Msa1443100:CDS |
| ACTATGACGATGTTGGAAAT+GGG | 0.546835 | tig0030289:-32530 | None:intergenic |
| AAATTGCAGGAACTTTAAGA+AGG | 0.556348 | tig0030289:-36263 | None:intergenic |
| CCAAAAGAAGGATCTTTACC+AGG | 0.561581 | tig0030289:-32859 | None:intergenic |
| ACCAATGACTATGACGATGT+TGG | 0.562519 | tig0030289:-32537 | None:intergenic |
| ACACTGTCAACCCCAAAAGA+AGG | 0.562843 | tig0030289:-32871 | None:intergenic |
| TTTGCAGGAGTAGACGTGAA+TGG | 0.572420 | tig0030289:-36647 | None:intergenic |
| CCACAAGAGAGTGGTATGGT+TGG | 0.578175 | tig0030289:-36563 | None:intergenic |
| TCCAATATCAGCTATGCAGA+CGG | 0.581725 | tig0030289:+32629 | Msa1443100:intron |
| CTCTTTAGATATGACACCGC+AGG | 0.586462 | tig0030289:+35974 | Msa1443100:CDS |
| GCTGTGACTGATATTATTGA+CGG | 0.587769 | tig0030289:+36294 | Msa1443100:CDS |
| AAGGCCAGGGGAGCTACTGT+TGG | 0.594473 | tig0030289:+32985 | Msa1443100:CDS |
| AGCATATGTAACAAGAGCAG+AGG | 0.596717 | tig0030289:-32905 | None:intergenic |
| TTTCCATGATAACGTACCCA+AGG | 0.610898 | tig0030289:-32805 | None:intergenic |
| TTGGCCACAAGAGAGTGGTA+TGG | 0.634094 | tig0030289:-36567 | None:intergenic |
| GCAGGATGAATCATCAATCA+CGG | 0.637150 | tig0030289:+35992 | Msa1443100:CDS |
| CAATATTGGCCACAAGAGAG+TGG | 0.638924 | tig0030289:-36572 | None:intergenic |
| TGCAACTGTCAAAGATATGG+AGG | 0.640472 | tig0030289:+36022 | Msa1443100:CDS |
| CCAACCATACCACTCTCTTG+TGG | 0.644862 | tig0030289:+36563 | Msa1443100:three_prime_UTR |
| GTGATTGATGATTCATCCTG+CGG | 0.661402 | tig0030289:-35990 | None:intergenic |
| AATATCAGCTATGCAGACGG+AGG | 0.702961 | tig0030289:+32632 | Msa1443100:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATTAATAATTATAT+TGG | - | tig0030289:33409-33428 | None:intergenic | 0.0% |
| !! | ATTATTAATTAATAATTATT+TGG | + | tig0030289:33414-33433 | Msa1443100:intron | 0.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | + | tig0030289:33423-33442 | Msa1443100:intron | 10.0% |
| !!! | TTTAATAATTATTTCTTACA+AGG | - | tig0030289:33741-33760 | None:intergenic | 10.0% |
| !! | TTTAATACATATACAAATAA+AGG | + | tig0030289:34013-34032 | Msa1443100:intron | 10.0% |
| !! | TAATAAAGTAAAAAGACTAA+CGG | - | tig0030289:32705-32724 | None:intergenic | 15.0% |
| !!! | TCTTTTTACTTTATTAGATT+AGG | + | tig0030289:32709-32728 | Msa1443100:intron | 15.0% |
| !!! | CTTTTTACTTTATTAGATTA+GGG | + | tig0030289:32710-32729 | Msa1443100:intron | 15.0% |
| !! | AGTATTTAAATTAATGAATC+TGG | + | tig0030289:33358-33377 | Msa1443100:intron | 15.0% |
| !! | GTATTTAAATTAATGAATCT+GGG | + | tig0030289:33359-33378 | Msa1443100:intron | 15.0% |
| !! | TAAAGTCAAATTAGATATAA+CGG | - | tig0030289:33886-33905 | None:intergenic | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+GGG | - | tig0030289:33971-33990 | None:intergenic | 15.0% |
| !! | ATAAGTTAGTAGTATTAATT+AGG | - | tig0030289:33972-33991 | None:intergenic | 15.0% |
| !! | TATAAAGAAAACTCTATTAT+AGG | + | tig0030289:34914-34933 | Msa1443100:intron | 15.0% |
| !!! | TGATTTTATCAAATTATTAC+CGG | + | tig0030289:35745-35764 | Msa1443100:intron | 15.0% |
| !! | TGAATAAAGTAATTAAGAAA+AGG | - | tig0030289:35891-35910 | None:intergenic | 15.0% |
| !!! | TTTATTAGATTAGGGTTTTT+AGG | + | tig0030289:32718-32737 | Msa1443100:intron | 20.0% |
| !!! | TTATTAGATTAGGGTTTTTA+GGG | + | tig0030289:32719-32738 | Msa1443100:intron | 20.0% |
| !! | CAATTGAATTGAATTGAATT+AGG | - | tig0030289:32762-32781 | None:intergenic | 20.0% |
| !! | ATCCTACAAAATTCATATAT+AGG | + | tig0030289:33153-33172 | Msa1443100:intron | 20.0% |
| !!! | AACCTATATATGAATTTTGT+AGG | - | tig0030289:33158-33177 | None:intergenic | 20.0% |
| !!! | TTATTACATTTTTACGAAAC+CGG | + | tig0030289:33512-33531 | Msa1443100:intron | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | - | tig0030289:33970-33989 | None:intergenic | 20.0% |
| !!! | GTATTTCTAAACATTACATT+AGG | - | tig0030289:34355-34374 | None:intergenic | 20.0% |
| !!! | GAGCAAGAAATAATATATTT+TGG | - | tig0030289:34669-34688 | None:intergenic | 20.0% |
| !!! | ACTCTATTTTATTAACATGT+AGG | + | tig0030289:35410-35429 | Msa1443100:intron | 20.0% |
| !! | TTAACATGTAGGAAAATTTA+TGG | + | tig0030289:35421-35440 | Msa1443100:intron | 20.0% |
| !! | CAAAATAATAAGTAATCTCA+AGG | - | tig0030289:35502-35521 | None:intergenic | 20.0% |
| !!! | TTTGATTTGTGTTCTTTTTA+AGG | + | tig0030289:35553-35572 | Msa1443100:intron | 20.0% |
| !!! | AAACAAATCAAGATGTATTT+TGG | + | tig0030289:35845-35864 | Msa1443100:intron | 20.0% |
| !! | AAAGTAATTAAGAAAAGGAT+TGG | - | tig0030289:35886-35905 | None:intergenic | 20.0% |
| !! | AAAATTGGAAAGATGAAATT+AGG | - | tig0030289:36441-36460 | None:intergenic | 20.0% |
| !! | GTGTTGCATATAAAAAAAAT+TGG | - | tig0030289:36456-36475 | None:intergenic | 20.0% |
| ! | ACATGAAACAATATTCGATT+TGG | + | tig0030289:32372-32391 | Msa1443100:five_prime_UTR | 25.0% |
| ! | CATGAAACAATATTCGATTT+GGG | + | tig0030289:32373-32392 | Msa1443100:five_prime_UTR | 25.0% |
| ! | TATACTTTATCCTTCAGATT+GGG | + | tig0030289:33101-33120 | Msa1443100:intron | 25.0% |
| !!! | ACAGCAAAAAAAGTGTTTTT+TGG | + | tig0030289:33469-33488 | Msa1443100:intron | 25.0% |
| !! | TATTACATTTTTACGAAACC+GGG | + | tig0030289:33513-33532 | Msa1443100:intron | 25.0% |
| ! | TAAGAAAAGTAAGACTAAAG+TGG | + | tig0030289:33824-33843 | Msa1443100:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | tig0030289:33960-33979 | None:intergenic | 25.0% |
| ! | TATACAAATAAAGGACAATG+TGG | + | tig0030289:34022-34041 | Msa1443100:intron | 25.0% |
| ! | TAAAAGGAAACAAAAGAAGA+TGG | - | tig0030289:34149-34168 | None:intergenic | 25.0% |
| ! | AATACAGATGCAAGTTTAAA+AGG | - | tig0030289:34165-34184 | None:intergenic | 25.0% |
| ! | TTAAACTTGCATCTGTATTA+TGG | + | tig0030289:34166-34185 | Msa1443100:intron | 25.0% |
| ! | TGTAATGTTTAGAAATACGA+AGG | + | tig0030289:34357-34376 | Msa1443100:intron | 25.0% |
| !!! | ATTTCTTTTGTTTTCTGGTT+GGG | + | tig0030289:34423-34442 | Msa1443100:intron | 25.0% |
| !! | ATATAATTGTTGTCTTTTGC+AGG | + | tig0030289:34522-34541 | Msa1443100:intron | 25.0% |
| ! | TTAGATTAAGTTCCTTTACA+AGG | - | tig0030289:34597-34616 | None:intergenic | 25.0% |
| ! | TGTAAAGGAACTTAATCTAA+AGG | + | tig0030289:34597-34616 | Msa1443100:CDS | 25.0% |
| ! | CAAGACAATCATAAACAATA+GGG | - | tig0030289:35093-35112 | None:intergenic | 25.0% |
| ! | TTATATATGCATAGTGAACT+AGG | + | tig0030289:35167-35186 | Msa1443100:intron | 25.0% |
| ! | TATATATGCATAGTGAACTA+GGG | + | tig0030289:35168-35187 | Msa1443100:intron | 25.0% |
| ! | AACAAATTCAGCTATTAGAA+TGG | + | tig0030289:35271-35290 | Msa1443100:intron | 25.0% |
| ! | TCATTCTGAATTGAAACATA+TGG | + | tig0030289:35820-35839 | Msa1443100:intron | 25.0% |
| !! | GAACATTTGGTTGATTTATT+GGG | + | tig0030289:36084-36103 | Msa1443100:intron | 25.0% |
| !! | AACATTTGGTTGATTTATTG+GGG | + | tig0030289:36085-36104 | Msa1443100:intron | 25.0% |
| ! | TTAGAAGGTGATTTATTTGA+TGG | - | tig0030289:36152-36171 | None:intergenic | 25.0% |
| ! | TTAGGTCTCTATAATTTAGA+AGG | - | tig0030289:36167-36186 | None:intergenic | 25.0% |
| ! | TGAAGAATTCCTACAAAATT+TGG | + | tig0030289:36332-36351 | Msa1443100:CDS | 25.0% |
| !! | AGGTCATTAATTTTATCGAT+GGG | + | tig0030289:36391-36410 | Msa1443100:CDS | 25.0% |
| ! | ATGAATGACACATACAATAT+TGG | - | tig0030289:36589-36608 | None:intergenic | 25.0% |
| !! | TCGATTTGGGTACTAAAAAA+AGG | + | tig0030289:32386-32405 | Msa1443100:five_prime_UTR | 30.0% |
| TGGGTACTAAAAAAAGGAAA+AGG | + | tig0030289:32392-32411 | Msa1443100:five_prime_UTR | 30.0% | |
| AGCTCAAATTTATTGACAAC+AGG | - | tig0030289:32663-32682 | None:intergenic | 30.0% | |
| CGTTATCATGGAAAATTCAA+AGG | + | tig0030289:32814-32833 | Msa1443100:CDS | 30.0% | |
| GTCTCAATTTGAACTTGATT+TGG | + | tig0030289:32836-32855 | Msa1443100:CDS | 30.0% | |
| GATAAAGGATTTAGACTTAC+AGG | - | tig0030289:33063-33082 | None:intergenic | 30.0% | |
| GTAAGTCTAAATCCTTTATC+TGG | + | tig0030289:33063-33082 | Msa1443100:intron | 30.0% | |
| TAGAAAGCAAAACCAGATAA+AGG | - | tig0030289:33078-33097 | None:intergenic | 30.0% | |
| CTATACTTTATCCTTCAGAT+TGG | + | tig0030289:33100-33119 | Msa1443100:intron | 30.0% | |
| !! | GTTGTTTTCTATGCATATGT+AGG | - | tig0030289:33181-33200 | None:intergenic | 30.0% |
| TCTTAAAATTCTGGGTTTGT+GGG | - | tig0030289:33551-33570 | None:intergenic | 30.0% | |
| TTCTTAAAATTCTGGGTTTG+TGG | - | tig0030289:33552-33571 | None:intergenic | 30.0% | |
| GATGGTCTTCTTAAAATTCT+GGG | - | tig0030289:33559-33578 | None:intergenic | 30.0% | |
| !! | CAGAATTTTAAGAAGACCAT+CGG | + | tig0030289:33558-33577 | Msa1443100:intron | 30.0% |
| AAAGTAACGCATGACATAAA+AGG | - | tig0030289:33854-33873 | None:intergenic | 30.0% | |
| ! | GTCAAATTAGATATAACGGA+GGG | - | tig0030289:33882-33901 | None:intergenic | 30.0% |
| AGTCAAATTAGATATAACGG+AGG | - | tig0030289:33883-33902 | None:intergenic | 30.0% | |
| !!! | ATAGCTCTAACTGTTTTTAC+TGG | + | tig0030289:34249-34268 | Msa1443100:intron | 30.0% |
| ATGTTTAGAAATACGAAGGT+TGG | + | tig0030289:34361-34380 | Msa1443100:intron | 30.0% | |
| TAGGCACTAAGAAACATTTA+GGG | - | tig0030289:34388-34407 | None:intergenic | 30.0% | |
| ATAGGCACTAAGAAACATTT+AGG | - | tig0030289:34389-34408 | None:intergenic | 30.0% | |
| AAAAGAAATGTAGCTGTGAT+AGG | - | tig0030289:34412-34431 | None:intergenic | 30.0% | |
| !!! | GCTACATTTCTTTTGTTTTC+TGG | + | tig0030289:34418-34437 | Msa1443100:intron | 30.0% |
| !!! | CATTTCTTTTGTTTTCTGGT+TGG | + | tig0030289:34422-34441 | Msa1443100:intron | 30.0% |
| !!! | TTTCTTTTGTTTTCTGGTTG+GGG | + | tig0030289:34424-34443 | Msa1443100:intron | 30.0% |
| TTAAGTTCCTTTACAAGGTT+GGG | - | tig0030289:34592-34611 | None:intergenic | 30.0% | |
| ATTAAGTTCCTTTACAAGGT+TGG | - | tig0030289:34593-34612 | None:intergenic | 30.0% | |
| TGTCTACAATAAACCTACAA+TGG | - | tig0030289:34800-34819 | None:intergenic | 30.0% | |
| CTTACATTTGCATTTGTGAA+AGG | + | tig0030289:34822-34841 | Msa1443100:intron | 30.0% | |
| ATATATGTGTGTTCATGTGA+AGG | - | tig0030289:34897-34916 | None:intergenic | 30.0% | |
| ! | ACATGTTTTGTCATCCAAAT+TGG | + | tig0030289:34982-35001 | Msa1443100:intron | 30.0% |
| GTAAACAATGGTATCCAATT+TGG | - | tig0030289:34999-35018 | None:intergenic | 30.0% | |
| GATATAATTCACGTTCTCAA+AGG | - | tig0030289:35071-35090 | None:intergenic | 30.0% | |
| CCAAGACAATCATAAACAAT+AGG | - | tig0030289:35094-35113 | None:intergenic | 30.0% | |
| CCTATTGTTTATGATTGTCT+TGG | + | tig0030289:35091-35110 | Msa1443100:intron | 30.0% | |
| ATATATGCATAGTGAACTAG+GGG | + | tig0030289:35169-35188 | Msa1443100:intron | 30.0% | |
| GAAGCAAGCATATAATAATG+TGG | + | tig0030289:35201-35220 | Msa1443100:intron | 30.0% | |
| ! | TTGCTAACTTATAGTGGAAT+GGG | - | tig0030289:35317-35336 | None:intergenic | 30.0% |
| ! | ATTGCTAACTTATAGTGGAA+TGG | - | tig0030289:35318-35337 | None:intergenic | 30.0% |
| TATGCATTGCTAACTTATAG+TGG | - | tig0030289:35323-35342 | None:intergenic | 30.0% | |
| CGATGTATATCATAATTGAG+TGG | + | tig0030289:35377-35396 | Msa1443100:intron | 30.0% | |
| !!! | TTTTGGCTGTTATTTTTGAC+AGG | + | tig0030289:35456-35475 | Msa1443100:intron | 30.0% |
| TAATAAGTAATCTCAAGGAG+AGG | - | tig0030289:35497-35516 | None:intergenic | 30.0% | |
| TTGAAAGTAACTACATATGC+CGG | - | tig0030289:35719-35738 | None:intergenic | 30.0% | |
| TATCAAATTATTACCGGTGT+CGG | + | tig0030289:35751-35770 | Msa1443100:intron | 30.0% | |
| GAATGAAACATTGACACAAA+CGG | - | tig0030289:35806-35825 | None:intergenic | 30.0% | |
| ! | GGAACATTTGGTTGATTTAT+TGG | + | tig0030289:36083-36102 | Msa1443100:intron | 30.0% |
| TCCTTTGTTAAATATTCCAC+AGG | + | tig0030289:36215-36234 | Msa1443100:intron | 30.0% | |
| CCTTTGTTAAATATTCCACA+GGG | + | tig0030289:36216-36235 | Msa1443100:intron | 30.0% | |
| ! | AAATTGCAGGAACTTTAAGA+AGG | - | tig0030289:36266-36285 | None:intergenic | 30.0% |
| ! | ACAGCTTTTACAAAAATTGC+AGG | - | tig0030289:36279-36298 | None:intergenic | 30.0% |
| ! | CAGGTCATTAATTTTATCGA+TGG | + | tig0030289:36390-36409 | Msa1443100:CDS | 30.0% |
| CTCACATATTTCCAATCAAT+TGG | - | tig0030289:36496-36515 | None:intergenic | 30.0% | |
| GAATGGCGATATAAATTAAG+AGG | - | tig0030289:36633-36652 | None:intergenic | 30.0% | |
| GAAAAGAAACGAAACAGAGT+TGG | + | tig0030289:32449-32468 | Msa1443100:five_prime_UTR | 35.0% | |
| !! | GTTGGAAATGGGTTTTTCAT+CGG | - | tig0030289:32522-32541 | None:intergenic | 35.0% |
| ACTATGACGATGTTGGAAAT+GGG | - | tig0030289:32533-32552 | None:intergenic | 35.0% | |
| AAAAAGACTAACGGAGAGTT+AGG | - | tig0030289:32696-32715 | None:intergenic | 35.0% | |
| !! | ATTGATTCCAGTTTTCCAGA+AGG | + | tig0030289:32778-32797 | Msa1443100:intron | 35.0% |
| !! | AATTTGAACTTGATTTGGCC+TGG | + | tig0030289:32841-32860 | Msa1443100:CDS | 35.0% |
| ! | CTGGTAAAGATCCTTCTTTT+GGG | + | tig0030289:32860-32879 | Msa1443100:CDS | 35.0% |
| ! | TGGTAAAGATCCTTCTTTTG+GGG | + | tig0030289:32861-32880 | Msa1443100:CDS | 35.0% |
| CCAGCATTAATGATCAAATC+AGG | - | tig0030289:32949-32968 | None:intergenic | 35.0% | |
| ! | CCTGATTTGATCATTAATGC+TGG | + | tig0030289:32946-32965 | Msa1443100:CDS | 35.0% |
| GGATTTAGACTTACAGGAAT+GGG | - | tig0030289:33057-33076 | None:intergenic | 35.0% | |
| AGGATTTAGACTTACAGGAA+TGG | - | tig0030289:33058-33077 | None:intergenic | 35.0% | |
| CGATGGTCTTCTTAAAATTC+TGG | - | tig0030289:33560-33579 | None:intergenic | 35.0% | |
| ATCCAGAATCAGAAATTGGT+GGG | - | tig0030289:33644-33663 | None:intergenic | 35.0% | |
| GTAGATCCAGAATCAGAAAT+TGG | - | tig0030289:33648-33667 | None:intergenic | 35.0% | |
| TAGTAGAAACACATGAGACT+AGG | - | tig0030289:33697-33716 | None:intergenic | 35.0% | |
| !! | TATGTCAAGTTGCGTTTTGA+AGG | + | tig0030289:34114-34133 | Msa1443100:intron | 35.0% |
| ! | ATTAGGAGAGTCTGTAGTTT+TGG | - | tig0030289:34338-34357 | None:intergenic | 35.0% |
| AGGCACTAAGAAACATTTAG+GGG | - | tig0030289:34387-34406 | None:intergenic | 35.0% | |
| AAATGTAGCTGTGATAGGAT+AGG | - | tig0030289:34407-34426 | None:intergenic | 35.0% | |
| !!! | TTCTTTTGTTTTCTGGTTGG+GGG | + | tig0030289:34425-34444 | Msa1443100:intron | 35.0% |
| ! | TTGCAGGTTTTTGATCTGTA+TGG | + | tig0030289:34538-34557 | Msa1443100:intron | 35.0% |
| ! | GTTTTTGATCTGTATGGAGT+TGG | + | tig0030289:34544-34563 | Msa1443100:CDS | 35.0% |
| ACATGTGATGTCAAGGAATT+TGG | - | tig0030289:34968-34987 | None:intergenic | 35.0% | |
| TGACAAAACATGTGATGTCA+AGG | - | tig0030289:34975-34994 | None:intergenic | 35.0% | |
| !! | TGATTGTCTTGGCTTTGATT+AGG | + | tig0030289:35102-35121 | Msa1443100:intron | 35.0% |
| ! | TAGCTGAATTTGTTCATGTC+AGG | - | tig0030289:35265-35284 | None:intergenic | 35.0% |
| CAGTTTAAACTATCCCAAGA+AGG | - | tig0030289:35589-35608 | None:intergenic | 35.0% | |
| TCTAACACACTGACACATAT+CGG | - | tig0030289:35683-35702 | None:intergenic | 35.0% | |
| TAATATATTGACACCGACAC+CGG | - | tig0030289:35767-35786 | None:intergenic | 35.0% | |
| ATACGTGCAAATATGGTTGA+AGG | - | tig0030289:35926-35945 | None:intergenic | 35.0% | |
| TGATGCAACTGTCAAAGATA+TGG | + | tig0030289:36019-36038 | Msa1443100:CDS | 35.0% | |
| CCCTGTGGAATATTTAACAA+AGG | - | tig0030289:36219-36238 | None:intergenic | 35.0% | |
| GCTGTGACTGATATTATTGA+CGG | + | tig0030289:36294-36313 | Msa1443100:CDS | 35.0% | |
| ! | TTACAGCAGCCAAATTTTGT+AGG | - | tig0030289:36344-36363 | None:intergenic | 35.0% |
| GTTGTACACTACCAATTGAT+TGG | + | tig0030289:36482-36501 | Msa1443100:three_prime_UTR | 35.0% | |
| AAACAGAGTTGGACTGCAAA+TGG | + | tig0030289:32460-32479 | Msa1443100:exon | 40.0% | |
| GACTATGACGATGTTGGAAA+TGG | - | tig0030289:32534-32553 | None:intergenic | 40.0% | |
| TCCAACATCGTCATAGTCAT+TGG | + | tig0030289:32536-32555 | Msa1443100:CDS | 40.0% | |
| ACCAATGACTATGACGATGT+TGG | - | tig0030289:32540-32559 | None:intergenic | 40.0% | |
| TCTGCATAGCTGATATTGGA+GGG | - | tig0030289:32629-32648 | None:intergenic | 40.0% | |
| TCCAATATCAGCTATGCAGA+CGG | + | tig0030289:32629-32648 | Msa1443100:intron | 40.0% | |
| !!! | TTTTCCAGAAGGTGTTCCTT+GGG | + | tig0030289:32789-32808 | Msa1443100:CDS | 40.0% |
| ! | TTTCCATGATAACGTACCCA+AGG | - | tig0030289:32808-32827 | None:intergenic | 40.0% |
| CCAAAAGAAGGATCTTTACC+AGG | - | tig0030289:32862-32881 | None:intergenic | 40.0% | |
| ! | CCTGGTAAAGATCCTTCTTT+TGG | + | tig0030289:32859-32878 | Msa1443100:CDS | 40.0% |
| TGTAACAAGAGCAGAGGATA+TGG | - | tig0030289:32902-32921 | None:intergenic | 40.0% | |
| AGCATATGTAACAAGAGCAG+AGG | - | tig0030289:32908-32927 | None:intergenic | 40.0% | |
| TTATCCTTCAGATTGGGAAG+TGG | + | tig0030289:33107-33126 | Msa1443100:intron | 40.0% | |
| TATCCTTCAGATTGGGAAGT+GGG | + | tig0030289:33108-33127 | Msa1443100:intron | 40.0% | |
| AGGATGTAACAATCCGTGTT+AGG | - | tig0030289:33138-33157 | None:intergenic | 40.0% | |
| AAATTCTGGGTTTGTGGGTT+GGG | - | tig0030289:33546-33565 | None:intergenic | 40.0% | |
| AAAATTCTGGGTTTGTGGGT+TGG | - | tig0030289:33547-33566 | None:intergenic | 40.0% | |
| GATCCAGAATCAGAAATTGG+TGG | - | tig0030289:33645-33664 | None:intergenic | 40.0% | |
| TACAAGGTTGGGTGTTTCAA+AGG | - | tig0030289:34581-34600 | None:intergenic | 40.0% | |
| TGAAACACCCAACCTTGTAA+AGG | + | tig0030289:34582-34601 | Msa1443100:CDS | 40.0% | |
| AGGTTACATCACATGTTTGC+GGG | - | tig0030289:34854-34873 | None:intergenic | 40.0% | |
| GAGGTTACATCACATGTTTG+CGG | - | tig0030289:34855-34874 | None:intergenic | 40.0% | |
| GTAACCTCCAATTGTTACAC+AGG | + | tig0030289:34867-34886 | Msa1443100:intron | 40.0% | |
| TAAGCCTGTGTAACAATTGG+AGG | - | tig0030289:34874-34893 | None:intergenic | 40.0% | |
| AGGTAAGCCTGTGTAACAAT+TGG | - | tig0030289:34877-34896 | None:intergenic | 40.0% | |
| CAGTTCTTCTGGGTAAACAA+TGG | - | tig0030289:35011-35030 | None:intergenic | 40.0% | |
| CATTGTTTACCCAGAAGAAC+TGG | + | tig0030289:35009-35028 | Msa1443100:intron | 40.0% | |
| TCCTTCAATCCAGTTCTTCT+GGG | - | tig0030289:35021-35040 | None:intergenic | 40.0% | |
| !! | GAAAATTTATGGTGCCACCA+GGG | + | tig0030289:35432-35451 | Msa1443100:intron | 40.0% |
| !! | AAAATTTATGGTGCCACCAG+GGG | + | tig0030289:35433-35452 | Msa1443100:intron | 40.0% |
| AAAATAACAGCCAAAACCCC+TGG | - | tig0030289:35452-35471 | None:intergenic | 40.0% | |
| ! | AAACTATCCCAAGAAGGTAC+TGG | - | tig0030289:35583-35602 | None:intergenic | 40.0% |
| CCATATCCTGCACGTAAATT+GGG | - | tig0030289:35615-35634 | None:intergenic | 40.0% | |
| TCCATATCCTGCACGTAAAT+TGG | - | tig0030289:35616-35635 | None:intergenic | 40.0% | |
| GCACAGACGCATTAGATTAA+AGG | + | tig0030289:35647-35666 | Msa1443100:intron | 40.0% | |
| !! | CGCATTAGATTAAAGGTGTC+TGG | + | tig0030289:35654-35673 | Msa1443100:intron | 40.0% |
| ACCATATTTGCACGTATTCC+AGG | + | tig0030289:35929-35948 | Msa1443100:intron | 40.0% | |
| ACCTGGAATACGTGCAAATA+TGG | - | tig0030289:35933-35952 | None:intergenic | 40.0% | |
| ATATTTGCACGTATTCCAGG+TGG | + | tig0030289:35932-35951 | Msa1443100:intron | 40.0% | |
| ! | GTGATTGATGATTCATCCTG+CGG | - | tig0030289:35993-36012 | None:intergenic | 40.0% |
| GCAGGATGAATCATCAATCA+CGG | + | tig0030289:35992-36011 | Msa1443100:CDS | 40.0% | |
| TGCAACTGTCAAAGATATGG+AGG | + | tig0030289:36022-36041 | Msa1443100:CDS | 40.0% | |
| ! | ATATGGAGGTATGCAGTACA+TGG | + | tig0030289:36036-36055 | Msa1443100:intron | 40.0% |
| !!! | GTTTTCTAGAGCTTCGAAGT+TGG | + | tig0030289:36062-36081 | Msa1443100:intron | 40.0% |
| AGCTTCGAAGTTGGAACATT+TGG | + | tig0030289:36071-36090 | Msa1443100:intron | 40.0% | |
| CGAACAACTGTCAGTTACTT+AGG | - | tig0030289:36185-36204 | None:intergenic | 40.0% | |
| TGTAGGAATTCTTCAGCAGT+TGG | - | tig0030289:36327-36346 | None:intergenic | 40.0% | |
| TGTAACTTCTGCACTTGATC+TGG | + | tig0030289:36359-36378 | Msa1443100:CDS | 40.0% | |
| !! | GGAAATGGGTTTTTCATCGG+CGG | - | tig0030289:32519-32538 | None:intergenic | 45.0% |
| GTCTGCATAGCTGATATTGG+AGG | - | tig0030289:32630-32649 | None:intergenic | 45.0% | |
| TCCGTCTGCATAGCTGATAT+TGG | - | tig0030289:32633-32652 | None:intergenic | 45.0% | |
| AATATCAGCTATGCAGACGG+AGG | + | tig0030289:32632-32651 | Msa1443100:intron | 45.0% | |
| CTAACGGAGAGTTAGGATCT+TGG | - | tig0030289:32689-32708 | None:intergenic | 45.0% | |
| ! | AGGAACACCTTCTGGAAAAC+TGG | - | tig0030289:32788-32807 | None:intergenic | 45.0% |
| !!! | GTTTTCCAGAAGGTGTTCCT+TGG | + | tig0030289:32788-32807 | Msa1443100:intron | 45.0% |
| GTTCCTTGGGTACGTTATCA+TGG | + | tig0030289:32802-32821 | Msa1443100:CDS | 45.0% | |
| ACACTGTCAACCCCAAAAGA+AGG | - | tig0030289:32874-32893 | None:intergenic | 45.0% | |
| !!! | TCTTTTGGGGTTGACAGTGT+TGG | + | tig0030289:32874-32893 | Msa1443100:CDS | 45.0% |
| ATCATTAATGCTGGCACTGC+TGG | + | tig0030289:32955-32974 | Msa1443100:CDS | 45.0% | |
| ATCCTTCAGATTGGGAAGTG+GGG | + | tig0030289:33109-33128 | Msa1443100:intron | 45.0% | |
| ACAGTCGAGGGTTGTTGTAT+CGG | + | tig0030289:33281-33300 | Msa1443100:intron | 45.0% | |
| TGTATCGGGTGAGAAGGAAA+AGG | + | tig0030289:33296-33315 | Msa1443100:intron | 45.0% | |
| ATCTGGGCGTATCACTTCAT+TGG | + | tig0030289:33375-33394 | Msa1443100:intron | 45.0% | |
| TCTGGGCGTATCACTTCATT+GGG | + | tig0030289:33376-33395 | Msa1443100:intron | 45.0% | |
| GCAGCGAAAACACATGAAAG+CGG | - | tig0030289:33608-33627 | None:intergenic | 45.0% | |
| ! | ATGTGTTTTCGCTGCGATAC+CGG | + | tig0030289:33613-33632 | Msa1443100:intron | 45.0% |
| CTCCCACCAATTTCTGATTC+TGG | + | tig0030289:33639-33658 | Msa1443100:intron | 45.0% | |
| !!! | TTTGTTTTCTGGTTGGGGGA+AGG | + | tig0030289:34429-34448 | Msa1443100:intron | 45.0% |
| CACACACACTACTCAAGCAA+TGG | - | tig0030289:34700-34719 | None:intergenic | 45.0% | |
| GTGTGTGTGTGTGTGTCTAA+CGG | + | tig0030289:34721-34740 | Msa1443100:intron | 45.0% | |
| ! | AGCTGGTAATGTATAGCTCC+TGG | + | tig0030289:34746-34765 | Msa1443100:intron | 45.0% |
| ! | GCTGGTAATGTATAGCTCCT+GGG | + | tig0030289:34747-34766 | Msa1443100:intron | 45.0% |
| GGAAGGGTTAGATCCATTGT+AGG | + | tig0030289:34784-34803 | Msa1443100:intron | 45.0% | |
| ACCCAGAAGAACTGGATTGA+AGG | + | tig0030289:35017-35036 | Msa1443100:intron | 45.0% | |
| GTCCTTCAATCCAGTTCTTC+TGG | - | tig0030289:35022-35041 | None:intergenic | 45.0% | |
| !! | GGAAAATTTATGGTGCCACC+AGG | + | tig0030289:35431-35450 | Msa1443100:intron | 45.0% |
| AAGGTAGACCAGTACCTTCT+TGG | + | tig0030289:35572-35591 | Msa1443100:intron | 45.0% | |
| AGGTAGACCAGTACCTTCTT+GGG | + | tig0030289:35573-35592 | Msa1443100:intron | 45.0% | |
| CTGAAACCCAATTTACGTGC+AGG | + | tig0030289:35606-35625 | Msa1443100:intron | 45.0% | |
| CCCAATTTACGTGCAGGATA+TGG | + | tig0030289:35612-35631 | Msa1443100:intron | 45.0% | |
| GTTAGACACCAACACAACAC+CGG | + | tig0030289:35697-35716 | Msa1443100:intron | 45.0% | |
| !! | TACATATGCCGGTGTTGTGT+TGG | - | tig0030289:35708-35727 | None:intergenic | 45.0% |
| CAGTAGACAATTTAGCCACC+TGG | - | tig0030289:35950-35969 | None:intergenic | 45.0% | |
| CAGGTGGCTAAATTGTCTAC+TGG | + | tig0030289:35948-35967 | Msa1443100:intron | 45.0% | |
| CTCTTTAGATATGACACCGC+AGG | + | tig0030289:35974-35993 | Msa1443100:CDS | 45.0% | |
| CAATATTGGCCACAAGAGAG+TGG | - | tig0030289:36575-36594 | None:intergenic | 45.0% | |
| ATTAATGCTGGCACTGCTGG+TGG | + | tig0030289:32958-32977 | Msa1443100:CDS | 50.0% | |
| TCCTTCAGATTGGGAAGTGG+GGG | + | tig0030289:33110-33129 | Msa1443100:intron | 50.0% | |
| !! | ACTGTTTCTGGTGGCTGTTG+TGG | - | tig0030289:33266-33285 | None:intergenic | 50.0% |
| CAACAACCCTCGACTGTTTC+TGG | - | tig0030289:33278-33297 | None:intergenic | 50.0% | |
| CAGTCGAGGGTTGTTGTATC+GGG | + | tig0030289:33282-33301 | Msa1443100:intron | 50.0% | |
| GGTTGTTGTATCGGGTGAGA+AGG | + | tig0030289:33290-33309 | Msa1443100:intron | 50.0% | |
| GGCGTATCACTTCATTGGGA+AGG | + | tig0030289:33380-33399 | Msa1443100:intron | 50.0% | |
| AGAAGACCATCGGAATCGAC+AGG | + | tig0030289:33568-33587 | Msa1443100:intron | 50.0% | |
| !! | TGCATTCCTGTCGATTCCGA+TGG | - | tig0030289:33577-33596 | None:intergenic | 50.0% |
| GCGAAAACACATGAAAGCGG+TGG | - | tig0030289:33605-33624 | None:intergenic | 50.0% | |
| GATCTACTCAAGCACGCAGA+TGG | + | tig0030289:33661-33680 | Msa1443100:intron | 50.0% | |
| !!! | GGAGAGTCTGTAGTTTTGGC+AGG | - | tig0030289:34334-34353 | None:intergenic | 50.0% |
| CGTGCATGCCAAAATCTGCT+CGG | + | tig0030289:34457-34476 | Msa1443100:intron | 50.0% | |
| !!! | TGCAAGCACCGAGCAGATTT+TGG | - | tig0030289:34468-34487 | None:intergenic | 50.0% |
| ! | TCGGTGCTTGCAATGTTGTG+CGG | + | tig0030289:34476-34495 | Msa1443100:intron | 50.0% |
| GTGTGTGTCTAACGGTAAGC+TGG | + | tig0030289:34729-34748 | Msa1443100:intron | 50.0% | |
| GTATAGCTCCTGGGATAGCA+TGG | + | tig0030289:34756-34775 | Msa1443100:intron | 50.0% | |
| TCCTGGGATAGCATGGTCTA+GGG | + | tig0030289:34763-34782 | Msa1443100:intron | 50.0% | |
| GGATAGCATGGTCTAGGGAA+GGG | + | tig0030289:34768-34787 | Msa1443100:intron | 50.0% | |
| ATAACAGCCAAAACCCCTGG+TGG | - | tig0030289:35449-35468 | None:intergenic | 50.0% | |
| ACTTGATCTGGCTGTCGAAC+AGG | + | tig0030289:36371-36390 | Msa1443100:CDS | 50.0% | |
| CCACAAGAGAGTGGTATGGT+TGG | - | tig0030289:36566-36585 | None:intergenic | 50.0% | |
| CCAACCATACCACTCTCTTG+TGG | + | tig0030289:36563-36582 | Msa1443100:three_prime_UTR | 50.0% | |
| TTGGCCACAAGAGAGTGGTA+TGG | - | tig0030289:36570-36589 | None:intergenic | 50.0% | |
| CGTACCCAAGGAACACCTTC+TGG | - | tig0030289:32796-32815 | None:intergenic | 55.0% | |
| TCCCCCACTTCCCAATCTGA+AGG | - | tig0030289:33114-33133 | None:intergenic | 55.0% | |
| GGAAGTGGGGGATCCTAACA+CGG | + | tig0030289:33122-33141 | Msa1443100:intron | 55.0% | |
| !! | GTTTCTGGTGGCTGTTGTGG+AGG | - | tig0030289:33263-33282 | None:intergenic | 55.0% |
| ACAGCCACCAGAAACAGTCG+AGG | + | tig0030289:33268-33287 | Msa1443100:intron | 55.0% | |
| CAGCCACCAGAAACAGTCGA+GGG | + | tig0030289:33269-33288 | Msa1443100:intron | 55.0% | |
| !! | CAACCCTCGACTGTTTCTGG+TGG | - | tig0030289:33275-33294 | None:intergenic | 55.0% |
| !! | CAGAAATTGGTGGGAGCGTC+CGG | - | tig0030289:33635-33654 | None:intergenic | 55.0% |
| CTCCTGGGATAGCATGGTCT+AGG | + | tig0030289:34762-34781 | Msa1443100:intron | 55.0% | |
| TCCCTAGACCATGCTATCCC+AGG | - | tig0030289:34767-34786 | None:intergenic | 55.0% | |
| GGGATAGCATGGTCTAGGGA+AGG | + | tig0030289:34767-34786 | Msa1443100:intron | 55.0% | |
| !!! | TATGGTGCCACCAGGGGTTT+TGG | + | tig0030289:35439-35458 | Msa1443100:intron | 55.0% |
| TAAGCAACAGCTGCTCCCTG+TGG | - | tig0030289:36234-36253 | None:intergenic | 55.0% | |
| TGGCACTGCTGGTGGCTTCA+AGG | + | tig0030289:32966-32985 | Msa1443100:CDS | 60.0% | |
| TGCTGGTGGCTTCAAGGCCA+GGG | + | tig0030289:32972-32991 | Msa1443100:CDS | 60.0% | |
| AAGGCCAGGGGAGCTACTGT+TGG | + | tig0030289:32985-33004 | Msa1443100:CDS | 60.0% | |
| GTCACCAACAGTAGCTCCCC+TGG | - | tig0030289:32992-33011 | None:intergenic | 60.0% | |
| !! | TGTGGGTTGGGTTCGCAACC+CGG | - | tig0030289:33534-33553 | None:intergenic | 60.0% |
| CTGCTGGTGGCTTCAAGGCC+AGG | + | tig0030289:32971-32990 | Msa1443100:CDS | 65.0% | |
| GCTGGTGGCTTCAAGGCCAG+GGG | + | tig0030289:32973-32992 | Msa1443100:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0030289 | gene | 32358 | 36667 | 32358 | ID=Msa1443100;Name=Msa1443100 |
| tig0030289 | mRNA | 32358 | 36667 | 32358 | ID=Msa1443100-mRNA-1;Parent=Msa1443100;Name=Msa1443100-mRNA-1;_AED=0.04;_eAED=0.04;_QI=121|1|1|1|1|1|6|233|260 |
| tig0030289 | exon | 32358 | 32557 | 32358 | ID=Msa1443100-mRNA-1:exon:13716;Parent=Msa1443100-mRNA-1 |
| tig0030289 | exon | 32640 | 32703 | 32640 | ID=Msa1443100-mRNA-1:exon:13717;Parent=Msa1443100-mRNA-1 |
| tig0030289 | exon | 32789 | 33062 | 32789 | ID=Msa1443100-mRNA-1:exon:13718;Parent=Msa1443100-mRNA-1 |
| tig0030289 | exon | 34544 | 34618 | 34544 | ID=Msa1443100-mRNA-1:exon:13719;Parent=Msa1443100-mRNA-1 |
| tig0030289 | exon | 35951 | 36043 | 35951 | ID=Msa1443100-mRNA-1:exon:13720;Parent=Msa1443100-mRNA-1 |
| tig0030289 | exon | 36237 | 36667 | 36237 | ID=Msa1443100-mRNA-1:exon:13721;Parent=Msa1443100-mRNA-1 |
| tig0030289 | five_prime_UTR | 32358 | 32478 | 32358 | ID=Msa1443100-mRNA-1:five_prime_utr;Parent=Msa1443100-mRNA-1 |
| tig0030289 | CDS | 32479 | 32557 | 32479 | ID=Msa1443100-mRNA-1:cds;Parent=Msa1443100-mRNA-1 |
| tig0030289 | CDS | 32640 | 32703 | 32640 | ID=Msa1443100-mRNA-1:cds;Parent=Msa1443100-mRNA-1 |
| tig0030289 | CDS | 32789 | 33062 | 32789 | ID=Msa1443100-mRNA-1:cds;Parent=Msa1443100-mRNA-1 |
| tig0030289 | CDS | 34544 | 34618 | 34544 | ID=Msa1443100-mRNA-1:cds;Parent=Msa1443100-mRNA-1 |
| tig0030289 | CDS | 35951 | 36043 | 35951 | ID=Msa1443100-mRNA-1:cds;Parent=Msa1443100-mRNA-1 |
| tig0030289 | CDS | 36237 | 36434 | 36237 | ID=Msa1443100-mRNA-1:cds;Parent=Msa1443100-mRNA-1 |
| tig0030289 | three_prime_UTR | 36435 | 36667 | 36435 | ID=Msa1443100-mRNA-1:three_prime_utr;Parent=Msa1443100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
