AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1373700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373700 MtrunA17_Chr4g0037921 78.378 37 7 1 91 127 230 265 2.90e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 413 sgRNAs with CRISPR-Local

Find 507 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGATTATCAGTATTT+TGG 0.097766 tig0019461:+123226 Msa1373700:five_prime_UTR
CGAAGTTCTAGGTTCAATTT+TGG 0.166264 tig0019461:+124785 Msa1373700:five_prime_UTR
TCATGCCTATTCTTCAAAAT+TGG 0.171597 tig0019461:-124888 None:intergenic
AAGTCGATCGTTAATGTTAT+TGG 0.197602 tig0019461:+124816 Msa1373700:five_prime_UTR
TGATAGAGTTCTTTATAAAT+TGG 0.206729 tig0019461:+123489 Msa1373700:five_prime_UTR
GGCACTGGGAGTGGCTGGTT+TGG 0.210974 tig0019461:+125409 Msa1373700:five_prime_UTR
TCTTTCCTCTTTGAGTATAT+TGG 0.214805 tig0019461:+125278 Msa1373700:five_prime_UTR
GGATGAAACACCTGCTACTA+TGG 0.221807 tig0019461:+122814 Msa1373700:five_prime_UTR
GGGACTGTCTGCCTTCAAAA+TGG 0.240134 tig0019461:+127160 Msa1373700:CDS
CACATGTCCTCTTTCCAATT+TGG 0.244949 tig0019461:+126923 Msa1373700:CDS
CATGGTTATTGTTATTGTTC+TGG 0.247624 tig0019461:-121925 None:intergenic
GCACTGGGAGTGGCTGGTTT+GGG 0.272651 tig0019461:+125410 Msa1373700:five_prime_UTR
TCACGAAACACTTCATATCT+AGG 0.280495 tig0019461:+121881 Msa1373700:five_prime_UTR
TGCTTTATTGCCCTTCTTGA+AGG 0.285663 tig0019461:+123747 Msa1373700:five_prime_UTR
AGTATAATAGCTGGCATATA+AGG 0.286423 tig0019461:-124097 None:intergenic
ACAAGAAGGGTATAAGGTTT+TGG 0.290686 tig0019461:+123045 Msa1373700:five_prime_UTR
ATTTATAACTCTCTGTATAT+TGG 0.291943 tig0019461:+125626 Msa1373700:five_prime_UTR
TCTTTATAAATTGGATGAAT+TGG 0.295496 tig0019461:+123498 Msa1373700:five_prime_UTR
GCTGTTTATAATGACCAAAT+TGG 0.304430 tig0019461:-126937 None:intergenic
GTTTCCACAAGAAGGGTATA+AGG 0.306484 tig0019461:+123039 Msa1373700:five_prime_UTR
GATGCTAATGTGATGCTTAA+TGG 0.306849 tig0019461:+124540 Msa1373700:five_prime_UTR
TGCTCTCATGGACAGGGATT+TGG 0.309397 tig0019461:+125349 Msa1373700:five_prime_UTR
AAACGCCGGATCCGTCTAAA+AGG 0.311269 tig0019461:+122312 Msa1373700:five_prime_UTR
CTTTGAGTATATTGGTGAAA+TGG 0.316138 tig0019461:+125286 Msa1373700:five_prime_UTR
TCACACCTGGTGGTGCTACT+TGG 0.320633 tig0019461:+122729 Msa1373700:five_prime_UTR
AAACCACCAGGAGCTTCTTT+AGG 0.323685 tig0019461:-123190 None:intergenic
GTTATTTAACCTCCACTTGA+TGG 0.324258 tig0019461:-124628 None:intergenic
CTCCTGGGAGGAGGAATAGA+TGG 0.327493 tig0019461:+122636 Msa1373700:five_prime_UTR
AAGGCTCGCGAGTTTGGTGC+TGG 0.327844 tig0019461:+123385 Msa1373700:five_prime_UTR
TCCTGTTGGTGGTGTTGAAT+TGG 0.331040 tig0019461:+122895 Msa1373700:five_prime_UTR
AGCAGAAGAGGAGGAATAGA+TGG 0.331460 tig0019461:+122480 Msa1373700:five_prime_UTR
GGACCAAGAGAGGCATCTTT+TGG 0.333443 tig0019461:+123456 Msa1373700:five_prime_UTR
AAGATGAGAGTGAACCTTAC+AGG 0.336123 tig0019461:+124394 Msa1373700:five_prime_UTR
CTTCTCACATGCTTCCTGTT+GGG 0.337953 tig0019461:+126823 Msa1373700:CDS
TAATCTTCAGGCTTCATAAA+AGG 0.339010 tig0019461:-123214 None:intergenic
CTTGCTACACCTACGCCGTT+GGG 0.343482 tig0019461:+123115 Msa1373700:five_prime_UTR
TGGCTGAATTTAAGATTTGT+AGG 0.344827 tig0019461:-127568 None:intergenic
GGGAGAGAGAGGAAACAATT+AGG 0.348222 tig0019461:+122372 Msa1373700:five_prime_UTR
GTTGGGAGGTTCCACAAGTT+TGG 0.348559 tig0019461:+126840 Msa1373700:CDS
TGGATTTATCATTCCGTTGA+TGG 0.349225 tig0019461:+124071 Msa1373700:five_prime_UTR
ATTGTTATTGTTCTGGTTCA+AGG 0.350426 tig0019461:-121918 None:intergenic
CCAAAATACTGATAATCTTC+AGG 0.353123 tig0019461:-123226 None:intergenic
TTCTGCAGCAAGCCAGTTAC+CGG 0.355768 tig0019461:-127298 None:intergenic
GACGCCGGAGATAATGAATT+TGG 0.357554 tig0019461:+122188 Msa1373700:five_prime_UTR
TCCACCCTGCCCGGAAAGTT+AGG 0.358731 tig0019461:+125588 Msa1373700:five_prime_UTR
TGCTGACCACGGTTCTCTTC+CGG 0.364876 tig0019461:-123157 None:intergenic
TTTGGTCTACAGCGTGGTTT+AGG 0.365451 tig0019461:+127101 Msa1373700:CDS
AGTACACCTCCCTAACTTTC+CGG 0.366416 tig0019461:-125598 None:intergenic
AAGTCATGCTTATTCTGATT+CGG 0.367469 tig0019461:+124124 Msa1373700:five_prime_UTR
ACTGATAAGGCTCGCGAGTT+TGG 0.367775 tig0019461:+123379 Msa1373700:five_prime_UTR
GTGCTGGGCCTTTGTTTAAC+CGG 0.368322 tig0019461:+123401 Msa1373700:five_prime_UTR
GGAGGAAGGTGGTGTGAAAA+AGG 0.369758 tig0019461:+122520 Msa1373700:five_prime_UTR
CACAGCACAACCAATCAAAA+TGG 0.372170 tig0019461:-123836 None:intergenic
GATTGCAATCATCTATGTAT+TGG 0.372896 tig0019461:+125739 Msa1373700:exon
CTGCTTCATATGTGCCGATT+AGG 0.375326 tig0019461:+123074 Msa1373700:five_prime_UTR
TTGTTCTCAAAGTTTACCTT+TGG 0.375415 tig0019461:+127083 Msa1373700:CDS
ACCTTCGACACAGATCTTTA+CGG 0.376325 tig0019461:+122026 Msa1373700:five_prime_UTR
CTGGGTTAGGAGGATGGCTT+TGG 0.377749 tig0019461:+124275 Msa1373700:five_prime_UTR
GTGGTTTAGGTGATGAGTTT+AGG 0.382460 tig0019461:+127114 Msa1373700:CDS
AGCCACTGTGGAAGGGTATT+AGG 0.382814 tig0019461:+124007 Msa1373700:five_prime_UTR
GAAGAGTATCCCGAAGTTCT+AGG 0.383693 tig0019461:+124774 Msa1373700:five_prime_UTR
AGGTCGAACTGTCCGGTAAC+TGG 0.389226 tig0019461:+127286 Msa1373700:intron
TTTGAGTATATTGGTGAAAT+GGG 0.389391 tig0019461:+125287 Msa1373700:five_prime_UTR
AGTCATGCTTATTCTGATTC+GGG 0.389394 tig0019461:+124125 Msa1373700:five_prime_UTR
CCTTCTCACATGCTTCCTGT+TGG 0.392562 tig0019461:+126822 Msa1373700:CDS
GGAGAAGTTTCAAATATGTT+TGG 0.392943 tig0019461:-125473 None:intergenic
GGACTGTCTGCCTTCAAAAT+GGG 0.396665 tig0019461:+127161 Msa1373700:CDS
TGCCGTGAAGCACATGGCAC+TGG 0.397418 tig0019461:+125394 Msa1373700:five_prime_UTR
CTGTTAATCGGAGCAATTAC+AGG 0.398020 tig0019461:-122158 None:intergenic
CTGCAATACCTGCCCTTACA+AGG 0.399612 tig0019461:+127139 Msa1373700:CDS
GTAGCAAGAAGCTTCCTTGC+AGG 0.400126 tig0019461:-123100 None:intergenic
AGCTTGGATAGTGAATTTAT+AGG 0.405098 tig0019461:+126957 Msa1373700:CDS
AGCAGCAGCTTCAGCAAGTG+CGG 0.405247 tig0019461:-123950 None:intergenic
GTACACCTCCCTAACTTTCC+GGG 0.406012 tig0019461:-125597 None:intergenic
GACTCCGCTTTATCAGATTC+CGG 0.406653 tig0019461:+123138 Msa1373700:five_prime_UTR
AGTAGTCTTCATCAATCAAA+AGG 0.407120 tig0019461:-123561 None:intergenic
TGAGCTTCTTGAGATGCTTA+AGG 0.409469 tig0019461:+125004 Msa1373700:five_prime_UTR
GTTGCTTATGCAGCCTACTT+TGG 0.415175 tig0019461:+123432 Msa1373700:five_prime_UTR
CCAGAACTTAACGTGCAAAA+TGG 0.415455 tig0019461:+125239 Msa1373700:five_prime_UTR
TTCCTTGCAGGTGTCCTAAT+CGG 0.417079 tig0019461:-123088 None:intergenic
TCCATGACCATTCGCCTGTA+AGG 0.417256 tig0019461:-124408 None:intergenic
CCACAAATCTGAGGAAGATA+TGG 0.419038 tig0019461:-124603 None:intergenic
TGAGAAGGTGGTCACTAACT+TGG 0.419649 tig0019461:+124437 Msa1373700:five_prime_UTR
CCATATCTTCCTCAGATTTG+TGG 0.421065 tig0019461:+124603 Msa1373700:five_prime_UTR
TCCCAGTGCCATGTGCTTCA+CGG 0.421966 tig0019461:-125396 None:intergenic
TTCCTCTCTTTCTGCTCATC+CGG 0.422972 tig0019461:-123286 None:intergenic
TGGTAAGGCTGCGCCTGTGC+AGG 0.426212 tig0019461:+122430 Msa1373700:five_prime_UTR
CCTACACCTGGTGCTTTACA+AGG 0.426727 tig0019461:+122923 Msa1373700:five_prime_UTR
ATGCTAATGTGATGCTTAAT+GGG 0.428045 tig0019461:+124541 Msa1373700:five_prime_UTR
TGGGTAGGATTGCTGATCGT+GGG 0.432130 tig0019461:+124940 Msa1373700:five_prime_UTR
TGGACAGGGATTTGGTTCAT+AGG 0.432432 tig0019461:+125357 Msa1373700:five_prime_UTR
CATCATCACTGGTCTGCTCT+TGG 0.435116 tig0019461:-124521 None:intergenic
AAGGCAGACAGTCCCTTGTA+AGG 0.436993 tig0019461:-127152 None:intergenic
ATAACATTGATGAATATGTT+AGG 0.437807 tig0019461:+123674 Msa1373700:five_prime_UTR
AGAGTAATTGATGCTACTCC+TGG 0.438883 tig0019461:+122620 Msa1373700:five_prime_UTR
GTTGTCTTGTATGAATATCT+TGG 0.439580 tig0019461:+124750 Msa1373700:five_prime_UTR
GTTTCTTCTTCTTCAGTAGC+AGG 0.441462 tig0019461:-122083 None:intergenic
AGAGCTACTGTGAACACTTT+CGG 0.442013 tig0019461:+125047 Msa1373700:five_prime_UTR
CAAAATTGAACCTAGAACTT+CGG 0.442182 tig0019461:-124784 None:intergenic
GACTACTATGCCCGTGTTGA+GGG 0.443057 tig0019461:+123577 Msa1373700:five_prime_UTR
CTTGGCAAGCTCGGCACACT+GGG 0.443354 tig0019461:+123791 Msa1373700:five_prime_UTR
CTTCAAAATTGGAGTCAACC+TGG 0.446024 tig0019461:-124877 None:intergenic
CTCTCTGTATATTGGAGCTC+AGG 0.446206 tig0019461:+125634 Msa1373700:five_prime_UTR
TCCATTTGCTGAACTATGTC+TGG 0.446236 tig0019461:+125450 Msa1373700:five_prime_UTR
TCTTCAGTAGCAGGAATTGA+AGG 0.447200 tig0019461:-122074 None:intergenic
GAGAGATGAAGCGTTGAAGA+GGG 0.447466 tig0019461:+122352 Msa1373700:five_prime_UTR
TTTGAGGCAGTTAACTGATA+AGG 0.448032 tig0019461:+123366 Msa1373700:five_prime_UTR
CATCTCGATCTCTGTCTCTT+CGG 0.448967 tig0019461:-122791 None:intergenic
GTTGATTTCGAAGAAGAAGA+AGG 0.451871 tig0019461:+122394 Msa1373700:five_prime_UTR
TCGAGGATGCTCTCATGGAC+AGG 0.452928 tig0019461:+125342 Msa1373700:five_prime_UTR
ATAAATTGGATGAATTGGTT+CGG 0.454142 tig0019461:+123503 Msa1373700:five_prime_UTR
CACATGGCACTGGGAGTGGC+TGG 0.454748 tig0019461:+125404 Msa1373700:five_prime_UTR
ACAAGAATCTTATGCACATA+AGG 0.457643 tig0019461:-123526 None:intergenic
TTTGGTCATTATAAACAGCT+TGG 0.458317 tig0019461:+126941 Msa1373700:CDS
CGTCTTCTCGATTTCATCAT+CGG 0.458922 tig0019461:-121952 None:intergenic
GGTGTCATCGCATTCGAATC+CGG 0.459259 tig0019461:-122566 None:intergenic
AAGAAGGAAGAGGAAGAAGC+TGG 0.460954 tig0019461:+122410 Msa1373700:five_prime_UTR
GGCGCAGTTGTAAACTCGCT+CGG 0.461377 tig0019461:+124567 Msa1373700:five_prime_UTR
ATGGGATCAGAATCAGAATC+TGG 0.462957 tig0019461:+122499 Msa1373700:five_prime_UTR
TGGGATGCTACTCCAACTCC+TGG 0.463464 tig0019461:+122596 Msa1373700:five_prime_UTR
CACACCTGGTGGTGCTACTT+GGG 0.464255 tig0019461:+122730 Msa1373700:five_prime_UTR
GCCAATTCAACACCACCAAC+AGG 0.464397 tig0019461:-122896 None:intergenic
GTGCCATGAGGAACAATTGA+TGG 0.465345 tig0019461:+124716 Msa1373700:five_prime_UTR
AACTTGTGGAACCTCCCAAC+AGG 0.465872 tig0019461:-126837 None:intergenic
ACAGATCCTCATCCATTCTC+TGG 0.468210 tig0019461:-124979 None:intergenic
CTGGGAAGCAAATCCTTGAT+AGG 0.469271 tig0019461:-124858 None:intergenic
CACGAAACACTTCATATCTA+GGG 0.469789 tig0019461:+121882 Msa1373700:five_prime_UTR
GACTTCTGATTGGGATGCAC+CGG 0.469853 tig0019461:+122547 Msa1373700:five_prime_UTR
TGAAGGGATGAGGGTAGCAT+TGG 0.472155 tig0019461:+125526 Msa1373700:five_prime_UTR
TTTGCTCGAGGATGCTCTCA+TGG 0.472635 tig0019461:+125337 Msa1373700:five_prime_UTR
AAAATTGAACCTAGAACTTC+GGG 0.472948 tig0019461:-124783 None:intergenic
AGTGTCGTTGCATCTGCTCT+CGG 0.474620 tig0019461:+123718 Msa1373700:five_prime_UTR
TCATCAATGTTATCTATGTC+AGG 0.476225 tig0019461:-123664 None:intergenic
ACCTCCCTAACTTTCCGGGC+AGG 0.476349 tig0019461:-125593 None:intergenic
CTCAACAAATTATACTGCTC+TGG 0.476465 tig0019461:-122956 None:intergenic
TCTTGCTACACCTACGCCGT+TGG 0.476894 tig0019461:+123114 Msa1373700:five_prime_UTR
GCCAGACATAGTTCAGCAAA+TGG 0.476897 tig0019461:-125451 None:intergenic
AAAGGCTAAGACTTCTGATT+GGG 0.476928 tig0019461:+122538 Msa1373700:five_prime_UTR
TCTAATCTCAGTAAAGCTGC+TGG 0.478206 tig0019461:+123613 Msa1373700:five_prime_UTR
AGTGGCTGGTTTGGGTTGTG+AGG 0.478528 tig0019461:+125418 Msa1373700:five_prime_UTR
AAAAGGCTAAGACTTCTGAT+TGG 0.479035 tig0019461:+122537 Msa1373700:five_prime_UTR
CTCACATGCTTCCTGTTGGG+AGG 0.480426 tig0019461:+126826 Msa1373700:CDS
TGCGATGACACCAGGGAGAT+GGG 0.480542 tig0019461:+122577 Msa1373700:five_prime_UTR
GTAGTCTTCATCAATCAAAA+GGG 0.482357 tig0019461:-123560 None:intergenic
GTTGAATGAAGAGAATGAAG+AGG 0.482375 tig0019461:+123255 Msa1373700:five_prime_UTR
ATGCGATGACACCAGGGAGA+TGG 0.483151 tig0019461:+122576 Msa1373700:five_prime_UTR
GCTTATGCAGCCTACTTTGG+AGG 0.483942 tig0019461:+123435 Msa1373700:five_prime_UTR
TGAGAGATGAAGCGTTGAAG+AGG 0.484924 tig0019461:+122351 Msa1373700:five_prime_UTR
CTATCAAGGATTTGCTTCCC+AGG 0.486209 tig0019461:+124859 Msa1373700:five_prime_UTR
TCTGTCAGAGTAAGAAATCT+TGG 0.487061 tig0019461:+123773 Msa1373700:five_prime_UTR
ATAATTTGTTGAGGTGGGAG+AGG 0.487090 tig0019461:+122966 Msa1373700:five_prime_UTR
CAAGGTCAATACAGTTCTCC+TGG 0.488577 tig0019461:-124917 None:intergenic
GCATAAGCAACGGCAGTATC+CGG 0.489503 tig0019461:-123420 None:intergenic
GTCGGTGTTGCTGATATTGT+TGG 0.492268 tig0019461:+124351 Msa1373700:five_prime_UTR
TGGGATGAGACACCGACGCC+AGG 0.493209 tig0019461:+122656 Msa1373700:five_prime_UTR
GGGCAGGGTGGAACAATCCT+TGG 0.493584 tig0019461:-125577 None:intergenic
AGCGTTGAAGAGGGAGAGAG+AGG 0.494960 tig0019461:+122361 Msa1373700:five_prime_UTR
TTCAAGAAGGGCAATAAAGC+AGG 0.495269 tig0019461:-123745 None:intergenic
TTGTGCTCATCCTCTAGTGA+TGG 0.495697 tig0019461:-125677 None:intergenic
GGAAGAGGAAGAAGCTGGTA+AGG 0.495769 tig0019461:+122415 Msa1373700:five_prime_UTR
GCAGTATAATTTGTTGAGGT+GGG 0.495847 tig0019461:+122961 Msa1373700:five_prime_UTR
GAAGCACATGGCACTGGGAG+TGG 0.497504 tig0019461:+125400 Msa1373700:five_prime_UTR
GGAAAGTTAGGGAGGTGTAC+TGG 0.497515 tig0019461:+125600 Msa1373700:five_prime_UTR
TCTTGGCAAGCTCGGCACAC+TGG 0.499203 tig0019461:+123790 Msa1373700:five_prime_UTR
GATTATTCAATAGAGTTGCC+AGG 0.499509 tig0019461:-125103 None:intergenic
AAACTTCTGGGTTAGGAGGA+TGG 0.499766 tig0019461:+124269 Msa1373700:five_prime_UTR
TGCTACCCTCATCCCTTCAA+TGG 0.500344 tig0019461:-125522 None:intergenic
GTAATCCCGCCACTAAGCTT+AGG 0.501057 tig0019461:-122761 None:intergenic
GCAAGAATTACGTAAGAAGA+TGG 0.502364 tig0019461:+121974 Msa1373700:five_prime_UTR
GTTATCTATGTCAGGCCTCA+TGG 0.502813 tig0019461:-123656 None:intergenic
CCACCCTGCCCGGAAAGTTA+GGG 0.503764 tig0019461:+125589 Msa1373700:five_prime_UTR
AACTTTGCTGCGTCAATCAC+CGG 0.504140 tig0019461:+122134 Msa1373700:five_prime_UTR
GATTCGAATGCGATGACACC+AGG 0.504404 tig0019461:+122569 Msa1373700:five_prime_UTR
GAAGATGACTCCACCTATCA+AGG 0.504608 tig0019461:+124845 Msa1373700:five_prime_UTR
CCACCAGGTGTTACACCACC+CGG 0.505642 tig0019461:-122704 None:intergenic
TGCAAAAGCCATCGGTCCAC+AGG 0.505769 tig0019461:+125076 Msa1373700:five_prime_UTR
TAACCAAAAGATGCCTCTCT+TGG 0.506202 tig0019461:-123459 None:intergenic
TATGAAGTGTTTCGTGAAGA+AGG 0.506262 tig0019461:-121875 None:intergenic
GCGTCGTTAGTACTGTTAAT+CGG 0.507403 tig0019461:-122170 None:intergenic
AAGGATTGTTCCACCCTGCC+CGG 0.508736 tig0019461:+125579 Msa1373700:five_prime_UTR
GATTCAAGCATCACAACTGT+TGG 0.508875 tig0019461:+126865 Msa1373700:CDS
GCAGGTGTAGCACCAGGTAA+TGG 0.509309 tig0019461:-122848 None:intergenic
TGCCTTCAAAATGGGGAAGA+AGG 0.510699 tig0019461:+127169 Msa1373700:CDS
CTTGTGGAAATTATAGAGCA+TGG 0.510872 tig0019461:+123877 Msa1373700:five_prime_UTR
AGCAGTATAATTTGTTGAGG+TGG 0.511121 tig0019461:+122960 Msa1373700:five_prime_UTR
CCTCCCTAACTTTCCGGGCA+GGG 0.511382 tig0019461:-125592 None:intergenic
GTTGATTCTGATGCTACCCC+GGG 0.511419 tig0019461:+122686 Msa1373700:five_prime_UTR
ACCTTACAGGCGAATGGTCA+TGG 0.511454 tig0019461:+124407 Msa1373700:five_prime_UTR
ATAATGACCAAATTGGAAAG+AGG 0.513267 tig0019461:-126930 None:intergenic
GGTTGATTCTGATGCTACCC+CGG 0.514361 tig0019461:+122685 Msa1373700:five_prime_UTR
TCAATTACTCTCCCAGGAGT+TGG 0.514974 tig0019461:-122608 None:intergenic
AATGTGATGCTTAATGGGTT+CGG 0.516022 tig0019461:+124546 Msa1373700:five_prime_UTR
ATTGAATAATCTCAAGGTGC+AGG 0.516114 tig0019461:+125115 Msa1373700:five_prime_UTR
TGATATTGATGCACGGTTGG+AGG 0.516262 tig0019461:+124467 Msa1373700:five_prime_UTR
TCTGATTCAATCTCCGTCTC+CGG 0.517371 tig0019461:-122247 None:intergenic
GTCTCCGGTAATCATCTTCA+CGG 0.517637 tig0019461:-122232 None:intergenic
ATCTGATATTGATGCACGGT+TGG 0.519118 tig0019461:+124464 Msa1373700:five_prime_UTR
ATATGCCAGCTATTATACTA+AGG 0.519308 tig0019461:+124101 Msa1373700:five_prime_UTR
CTATGCCCGTGTTGAGGGGA+GGG 0.519770 tig0019461:+123582 Msa1373700:five_prime_UTR
CCTGGTGTTACTCCTGTTGG+TGG 0.520763 tig0019461:+122884 Msa1373700:five_prime_UTR
GTTCTTAATTACTGTCTCCA+AGG 0.520876 tig0019461:+125560 Msa1373700:five_prime_UTR
AGTTTGTACCTGCCAGAGAA+TGG 0.523117 tig0019461:+124967 Msa1373700:five_prime_UTR
TTGACCGTGAAGATGATTAC+CGG 0.523129 tig0019461:+122228 Msa1373700:five_prime_UTR
ACACCTGGTGTTACTCCTGT+TGG 0.523987 tig0019461:+122881 Msa1373700:five_prime_UTR
CCACCAGGTGTGACACCACC+AGG 0.524920 tig0019461:-122719 None:intergenic
GATGCTTAAGGCACACAAGA+AGG 0.525703 tig0019461:+125016 Msa1373700:five_prime_UTR
GTGTGTGAGCACCGAGGGTG+TGG 0.526071 tig0019461:+124203 Msa1373700:five_prime_UTR
TTCAAAATTGGAGTCAACCT+GGG 0.526301 tig0019461:-124876 None:intergenic
TAATTTGTTGAGGTGGGAGA+GGG 0.527574 tig0019461:+122967 Msa1373700:five_prime_UTR
ATCCTCATCCATTCTCTGGC+AGG 0.527834 tig0019461:-124975 None:intergenic
CGATACTCATTCATCAATGC+TGG 0.529184 tig0019461:-125212 None:intergenic
TCCCATCTATTCCTCCTCCC+AGG 0.529228 tig0019461:-122638 None:intergenic
GATGCTACTCCTAAGCTTAG+TGG 0.529824 tig0019461:+122752 Msa1373700:five_prime_UTR
TGGAAGCCATTGAAGGGATG+AGG 0.531614 tig0019461:+125516 Msa1373700:five_prime_UTR
GCGCAGTTGTAAACTCGCTC+GGG 0.533320 tig0019461:+124568 Msa1373700:five_prime_UTR
TCAGAAACTTCTGGGTTAGG+AGG 0.533859 tig0019461:+124265 Msa1373700:five_prime_UTR
AGCAGAATCAACAGCAGAAG+AGG 0.534224 tig0019461:+122468 Msa1373700:five_prime_UTR
GCATATAAGGCTTCCATCAA+CGG 0.534950 tig0019461:-124084 None:intergenic
CTGACAGACGGCCTTCAAGA+AGG 0.536511 tig0019461:-123758 None:intergenic
TCTCAGTAAAGCTGCTGGGT+TGG 0.536657 tig0019461:+123618 Msa1373700:five_prime_UTR
CATCGGTCCACAGGATGTCC+TGG 0.537451 tig0019461:+125085 Msa1373700:five_prime_UTR
TTCGAAGAAGAAGAAGGAAG+AGG 0.537961 tig0019461:+122400 Msa1373700:five_prime_UTR
GCTTGAATCTGCCAAACTTG+TGG 0.538852 tig0019461:-126851 None:intergenic
AAAACCTTATACCCTTCTTG+TGG 0.539245 tig0019461:-123043 None:intergenic
AAATATGATTTCTTTATCGT+AGG 0.539847 tig0019461:+127511 Msa1373700:three_prime_UTR
GATCTCTGTCTCTTCGGAGT+CGG 0.539893 tig0019461:-122785 None:intergenic
CTCTCTTGGTCCTCCAAAGT+AGG 0.542045 tig0019461:-123445 None:intergenic
GAATGAAGAGGAGTTGTCTC+CGG 0.542145 tig0019461:+123267 Msa1373700:five_prime_UTR
ATCACAGCATTTATCACATG+TGG 0.542295 tig0019461:-125494 None:intergenic
GCTGAAGCTGCTGCTCCCTA+CGG 0.542849 tig0019461:+123958 Msa1373700:five_prime_UTR
CTCCGGATGAGCAGAAAGAG+AGG 0.543658 tig0019461:+123284 Msa1373700:five_prime_UTR
GAAGGGATGAGGGTAGCATT+GGG 0.545211 tig0019461:+125527 Msa1373700:five_prime_UTR
ATCACTGGTCTGCTCTTGGA+AGG 0.546077 tig0019461:-124517 None:intergenic
ATTGAATCAGATTCTTTCGC+CGG 0.546582 tig0019461:+122259 Msa1373700:five_prime_UTR
GGTGTTGAAGCCACTGTGGA+AGG 0.546664 tig0019461:+123999 Msa1373700:five_prime_UTR
GCAAAAGCATCATGTCGATC+CGG 0.547159 tig0019461:-122278 None:intergenic
AACTCTATTGAATAATCTCA+AGG 0.549147 tig0019461:+125109 Msa1373700:five_prime_UTR
GAACAATTGATGGGTCATCT+TGG 0.549166 tig0019461:+124726 Msa1373700:five_prime_UTR
GTGGGTAGGATTGCTGATCG+TGG 0.549308 tig0019461:+124939 Msa1373700:five_prime_UTR
TTCATAAAAGGCAAACCACC+AGG 0.549336 tig0019461:-123202 None:intergenic
TTTCCACAAGAGATCTCAGA+TGG 0.550608 tig0019461:-123864 None:intergenic
GCAACACCGTGGTAAGGTGC+TGG 0.552685 tig0019461:+124029 Msa1373700:five_prime_UTR
GACTTCCTTAGTATAATAGC+TGG 0.552767 tig0019461:-124106 None:intergenic
GTTTAAAATGTTACTTTGAG+AGG 0.554227 tig0019461:+127435 Msa1373700:three_prime_UTR
ATGCTATGTTTCCACAAGAA+GGG 0.554606 tig0019461:+123032 Msa1373700:five_prime_UTR
TTTGGGTTGTGAGGATGCGC+TGG 0.556205 tig0019461:+125427 Msa1373700:five_prime_UTR
GTTACACTTCCCATAGTAGC+AGG 0.556443 tig0019461:-122824 None:intergenic
AGACAGTCCCTTGTAAGGGC+AGG 0.558512 tig0019461:-127147 None:intergenic
GAGAAGGTGGTCACTAACTT+GGG 0.558654 tig0019461:+124438 Msa1373700:five_prime_UTR
TGCTTCTGCCGTGAAGCACA+TGG 0.559329 tig0019461:+125388 Msa1373700:five_prime_UTR
CGTACCAAATTCATTATCTC+CGG 0.559808 tig0019461:-122192 None:intergenic
TACTGAAGAAGAAGAAACTC+AGG 0.561160 tig0019461:+122088 Msa1373700:five_prime_UTR
GGAGTAGCATCCCATCTCCC+TGG 0.561626 tig0019461:-122587 None:intergenic
GATGCTATGTTTCCACAAGA+AGG 0.561803 tig0019461:+123031 Msa1373700:five_prime_UTR
ACACCTGGTGGTGTCACACC+TGG 0.561820 tig0019461:+122716 Msa1373700:five_prime_UTR
CAACGGAATGATAAATCCAA+TGG 0.562037 tig0019461:-124067 None:intergenic
GGGAGAGGGATATTGAAGAG+AGG 0.562525 tig0019461:+122981 Msa1373700:five_prime_UTR
GACACCGACGCCAGGGAGGT+TGG 0.562580 tig0019461:+122664 Msa1373700:five_prime_UTR
CAGGACATCCTGTGGACCGA+TGG 0.563113 tig0019461:-125084 None:intergenic
AGACTACTATGCCCGTGTTG+AGG 0.563257 tig0019461:+123576 Msa1373700:five_prime_UTR
TGACAGACGGCCTTCAAGAA+GGG 0.565592 tig0019461:-123757 None:intergenic
CGAAGAGACAGAGATCGAGA+TGG 0.566307 tig0019461:+122792 Msa1373700:five_prime_UTR
TCAGAATCAACCAACCTCCC+TGG 0.566660 tig0019461:-122674 None:intergenic
ATGCTTAAGGCACACAAGAA+GGG 0.566666 tig0019461:+125017 Msa1373700:five_prime_UTR
TTGCTACACCTACGCCGTTG+GGG 0.568070 tig0019461:+123116 Msa1373700:five_prime_UTR
AGCAAATCACACACTATGCA+AGG 0.568398 tig0019461:-126984 None:intergenic
GATGTTCCTAAAGAAGCTCC+TGG 0.568413 tig0019461:+123184 Msa1373700:five_prime_UTR
CGAGGATGCTCTCATGGACA+GGG 0.568526 tig0019461:+125343 Msa1373700:five_prime_UTR
GCCGTGAAGCACATGGCACT+GGG 0.568760 tig0019461:+125395 Msa1373700:five_prime_UTR
TTTCACCAATATACTCAAAG+AGG 0.569856 tig0019461:-125283 None:intergenic
CTAATCGGCACATATGAAGC+AGG 0.570103 tig0019461:-123073 None:intergenic
GACTGTCTGCCTTCAAAATG+GGG 0.570292 tig0019461:+127162 Msa1373700:CDS
ATGAATTTGGTACGTCTCGA+AGG 0.570897 tig0019461:+122201 Msa1373700:five_prime_UTR
AGGCTCGCGAGTTTGGTGCT+GGG 0.571443 tig0019461:+123386 Msa1373700:five_prime_UTR
GAATAGGCATGAGAAAGTCC+AGG 0.573723 tig0019461:+124899 Msa1373700:five_prime_UTR
CACCAGGTGTTACACCACCC+GGG 0.574963 tig0019461:-122703 None:intergenic
GATTTCATCATCGGAAGCCA+TGG 0.575011 tig0019461:-121943 None:intergenic
TCCTGGGAGGAGGAATAGAT+GGG 0.575435 tig0019461:+122637 Msa1373700:five_prime_UTR
GCCCCATCTGAGATCTCTTG+TGG 0.575595 tig0019461:+123861 Msa1373700:five_prime_UTR
CTAATCTCAGTAAAGCTGCT+GGG 0.576518 tig0019461:+123614 Msa1373700:five_prime_UTR
GTAGCATCAATTACTCTCCC+AGG 0.576538 tig0019461:-122614 None:intergenic
ATTAAGAAGCAACTAGAGAG+AGG 0.576838 tig0019461:-127485 None:intergenic
GATGAAACACCTGCTACTAT+GGG 0.577456 tig0019461:+122815 Msa1373700:five_prime_UTR
GGCTGCGCCTGTGCAGGAGA+AGG 0.577891 tig0019461:+122436 Msa1373700:five_prime_UTR
GGGATGAGACACCGACGCCA+GGG 0.579668 tig0019461:+122657 Msa1373700:five_prime_UTR
CACAGAGGAAAACAGCTTTG+AGG 0.580944 tig0019461:+123350 Msa1373700:five_prime_UTR
CAACAGCAATTCTCGAAATG+AGG 0.581374 tig0019461:-124683 None:intergenic
ACATGTGATAAATGCTGTGA+TGG 0.582632 tig0019461:+125496 Msa1373700:five_prime_UTR
GGAGAACTGTATTGACCTTG+TGG 0.582863 tig0019461:+124920 Msa1373700:five_prime_UTR
TGCTGCTGGTGAGAAAACGC+CGG 0.582900 tig0019461:+122298 Msa1373700:five_prime_UTR
AATCGGAGCAATTACAGGAC+CGG 0.583315 tig0019461:-122153 None:intergenic
GGATATATTGCAAAAGCCAT+CGG 0.583367 tig0019461:+125068 Msa1373700:five_prime_UTR
CATCACATTAGCATCATCAC+TGG 0.583438 tig0019461:-124532 None:intergenic
GTAAGAAATCTTGGCAAGCT+CGG 0.583586 tig0019461:+123782 Msa1373700:five_prime_UTR
AAGCAGTGTGTGAGCACCGA+GGG 0.584845 tig0019461:+124198 Msa1373700:five_prime_UTR
TGCCATGAGGAACAATTGAT+GGG 0.585856 tig0019461:+124717 Msa1373700:five_prime_UTR
CCAGGTGTATACGCAGCAGC+AGG 0.587184 tig0019461:-122866 None:intergenic
GCATCCCAAGTAGCACCACC+AGG 0.587445 tig0019461:-122734 None:intergenic
GAGAACTGTATTGACCTTGT+GGG 0.588815 tig0019461:+124921 Msa1373700:five_prime_UTR
CAATGCTGGCAAAACTGTGA+AGG 0.589074 tig0019461:-125198 None:intergenic
TTGATGCTACTCCTGGGAGG+AGG 0.589392 tig0019461:+122627 Msa1373700:five_prime_UTR
TATTTCCCTCCCCTCAACAC+GGG 0.589548 tig0019461:-123587 None:intergenic
TGTGCTCATCCTCTAGTGAT+GGG 0.590227 tig0019461:-125676 None:intergenic
AGAATCAACAGCAGAAGAGG+AGG 0.592190 tig0019461:+122471 Msa1373700:five_prime_UTR
GAAGAGACAGAGATCGAGAT+GGG 0.592762 tig0019461:+122793 Msa1373700:five_prime_UTR
CAGAGCAGTATAATTTGTTG+AGG 0.592782 tig0019461:+122957 Msa1373700:five_prime_UTR
TACCTGCCAGAGAATGGATG+AGG 0.593216 tig0019461:+124973 Msa1373700:five_prime_UTR
AAGAAACTACAAGCAACTTG+TGG 0.594902 tig0019461:+124302 Msa1373700:five_prime_UTR
ACTGTATTGACCTTGTGGGT+AGG 0.597148 tig0019461:+124925 Msa1373700:five_prime_UTR
ATGAGAGCATCCTCGAGCAA+AGG 0.597266 tig0019461:-125335 None:intergenic
TATTAGGCAACACCGTGGTA+AGG 0.597389 tig0019461:+124023 Msa1373700:five_prime_UTR
ATCCTCTAGTGATGGGTATG+CGG 0.597770 tig0019461:-125669 None:intergenic
TGCTGTGACTCCTTTGCTCG+AGG 0.598099 tig0019461:+125325 Msa1373700:five_prime_UTR
GACCCATCAATTGTTCCTCA+TGG 0.598532 tig0019461:-124719 None:intergenic
CCTGCTGCTGCGTATACACC+TGG 0.598811 tig0019461:+122866 Msa1373700:five_prime_UTR
GCAGAAGAGGAGGAATAGAT+GGG 0.600043 tig0019461:+122481 Msa1373700:five_prime_UTR
CATGGAAACTATTGAGAAGG+TGG 0.601383 tig0019461:+124425 Msa1373700:five_prime_UTR
AGGCAGACAGTCCCTTGTAA+GGG 0.602291 tig0019461:-127151 None:intergenic
ACTATGCCCGTGTTGAGGGG+AGG 0.602376 tig0019461:+123581 Msa1373700:five_prime_UTR
CTACTCCTAAGCTTAGTGGC+GGG 0.602581 tig0019461:+122756 Msa1373700:five_prime_UTR
GTTAAATAACAAGAGTGCAA+AGG 0.602837 tig0019461:+124641 Msa1373700:five_prime_UTR
AGCGGAGTCCCCAACGGCGT+AGG 0.603362 tig0019461:-123124 None:intergenic
GGTCATGGAAACTATTGAGA+AGG 0.604849 tig0019461:+124422 Msa1373700:five_prime_UTR
GGAAGCCATTGAAGGGATGA+GGG 0.604873 tig0019461:+125517 Msa1373700:five_prime_UTR
TCAAGCTCTTCATCAGTCAA+AGG 0.605231 tig0019461:-123010 None:intergenic
ACCCCGGGTGGTGTAACACC+TGG 0.606778 tig0019461:+122701 Msa1373700:five_prime_UTR
CAGAATCAGAATCTGGAGGA+AGG 0.608189 tig0019461:+122506 Msa1373700:five_prime_UTR
AGAAGAAGAAACTCAGGATG+CGG 0.609736 tig0019461:+122094 Msa1373700:five_prime_UTR
GGAAGTGTAACACCATTACC+TGG 0.609752 tig0019461:+122836 Msa1373700:five_prime_UTR
GTATATTGGTGAAATGGGAA+AGG 0.614596 tig0019461:+125292 Msa1373700:five_prime_UTR
GGCAGTATCCGGTTAAACAA+AGG 0.615778 tig0019461:-123409 None:intergenic
GAGTAATTGATGCTACTCCT+GGG 0.615877 tig0019461:+122621 Msa1373700:five_prime_UTR
GATATCAGTTCTAATATACT+CGG 0.616544 tig0019461:-124229 None:intergenic
CCCTGCCCGGAAAGTTAGGG+AGG 0.616795 tig0019461:+125592 Msa1373700:five_prime_UTR
AGATTTGTGGTACCATCAAG+TGG 0.616908 tig0019461:+124616 Msa1373700:five_prime_UTR
TTATTTCCCTCCCCTCAACA+CGG 0.617901 tig0019461:-123588 None:intergenic
CCTTGTAAAGCACCAGGTGT+AGG 0.618017 tig0019461:-122923 None:intergenic
ATACTCGGCTTCCACACCCT+CGG 0.619507 tig0019461:-124214 None:intergenic
AAGGTAAACTTTGAGAACAA+TGG 0.621013 tig0019461:-127080 None:intergenic
GCCGTAAAGATCTGTGTCGA+AGG 0.621514 tig0019461:-122027 None:intergenic
GGGATGCTACTCCAACTCCT+GGG 0.623860 tig0019461:+122597 Msa1373700:five_prime_UTR
GCTGTGATGGAAGCCATTGA+AGG 0.626195 tig0019461:+125509 Msa1373700:five_prime_UTR
AGATTTCTTACTCTGACAGA+CGG 0.626383 tig0019461:-123770 None:intergenic
GTGTTGAAGCCACTGTGGAA+GGG 0.626540 tig0019461:+124000 Msa1373700:five_prime_UTR
TCAACCAACCTCCCTGGCGT+CGG 0.626693 tig0019461:-122668 None:intergenic
CTACTTTGGAGGACCAAGAG+AGG 0.627256 tig0019461:+123446 Msa1373700:five_prime_UTR
CCACCAACAGGAGTAACACC+AGG 0.627500 tig0019461:-122884 None:intergenic
AACGACCCTTGTAAAGCACC+AGG 0.628494 tig0019461:-122929 None:intergenic
CTACTATGATTGCTGCCATG+AGG 0.628805 tig0019461:+123641 Msa1373700:five_prime_UTR
ACTACTATGCCCGTGTTGAG+GGG 0.629824 tig0019461:+123578 Msa1373700:five_prime_UTR
CAGAACAATAACAATAACCA+TGG 0.631355 tig0019461:+121926 Msa1373700:five_prime_UTR
TCAAAACTTTCAATACCGTA+GGG 0.631505 tig0019461:-123973 None:intergenic
TTGTAATCTTTGCATGACAA+TGG 0.633057 tig0019461:+127336 Msa1373700:three_prime_UTR
TGTCTCTGCAACAATAGCAA+TGG 0.633675 tig0019461:-125168 None:intergenic
CTGTGATGGAAGCCATTGAA+GGG 0.634079 tig0019461:+125510 Msa1373700:five_prime_UTR
GGAAGCAAATCCTTGATAGG+TGG 0.634174 tig0019461:-124855 None:intergenic
GAGTGAACCTTACAGGCGAA+TGG 0.634771 tig0019461:+124401 Msa1373700:five_prime_UTR
ATAATCTCAAGGTGCAGGAG+AGG 0.636931 tig0019461:+125120 Msa1373700:five_prime_UTR
AAAGTAGGCTGCATAAGCAA+CGG 0.637377 tig0019461:-123430 None:intergenic
ATCGGCACATATGAAGCAGG+AGG 0.639925 tig0019461:-123070 None:intergenic
CCCTAACTTTCCGGGCAGGG+TGG 0.640804 tig0019461:-125589 None:intergenic
ATAACAAGAGTGCAAAGGTG+AGG 0.641690 tig0019461:+124646 Msa1373700:five_prime_UTR
TTCCACAAGAGATCTCAGAT+GGG 0.642677 tig0019461:-123863 None:intergenic
CCAACAGGAAGCATGTGAGA+AGG 0.643377 tig0019461:-126822 None:intergenic
GTCAAAACTTTCAATACCGT+AGG 0.643954 tig0019461:-123974 None:intergenic
TCTTCCGGAATCTGATAAAG+CGG 0.645527 tig0019461:-123142 None:intergenic
AACGGTTGAGATAGCAAACA+AGG 0.646210 tig0019461:+124329 Msa1373700:five_prime_UTR
CCTGGTGGTGTCACACCTGG+TGG 0.647706 tig0019461:+122719 Msa1373700:five_prime_UTR
GCAGCAGCAGGTGTAGCACC+AGG 0.648033 tig0019461:-122854 None:intergenic
TGCCGCATACCCATCACTAG+AGG 0.648920 tig0019461:+125667 Msa1373700:five_prime_UTR
GAATTGGCTACACCTACACC+TGG 0.650303 tig0019461:+122911 Msa1373700:five_prime_UTR
TGATAAAGCGGAGTCCCCAA+CGG 0.650539 tig0019461:-123130 None:intergenic
TGCAATACCTGCCCTTACAA+GGG 0.651094 tig0019461:+127140 Msa1373700:CDS
AATCAGAATCTGGAGGAAGG+TGG 0.653087 tig0019461:+122509 Msa1373700:five_prime_UTR
TAGTCTTCATCAATCAAAAG+GGG 0.654336 tig0019461:-123559 None:intergenic
AGAGTTGCCAGGACATCCTG+TGG 0.655314 tig0019461:-125092 None:intergenic
AATGCTGGCAAAACTGTGAA+GGG 0.660107 tig0019461:-125197 None:intergenic
CAAGCAACTTGTGGAGACAA+CGG 0.660815 tig0019461:+124311 Msa1373700:five_prime_UTR
ATTCGAATGCGATGACACCA+GGG 0.662104 tig0019461:+122570 Msa1373700:five_prime_UTR
TCCACAAGAGATCTCAGATG+GGG 0.662742 tig0019461:-123862 None:intergenic
GCTACTCCTAAGCTTAGTGG+CGG 0.664573 tig0019461:+122755 Msa1373700:five_prime_UTR
TAAACCACGCTGTAGACCAA+AGG 0.665230 tig0019461:-127099 None:intergenic
GGGTAGGATTGCTGATCGTG+GGG 0.665788 tig0019461:+124941 Msa1373700:five_prime_UTR
ACCAGGTGTTACACCACCCG+GGG 0.667022 tig0019461:-122702 None:intergenic
GGATCAGAATCAGAATCTGG+AGG 0.671293 tig0019461:+122502 Msa1373700:five_prime_UTR
TGCCGATTAGGACACCTGCA+AGG 0.675865 tig0019461:+123086 Msa1373700:five_prime_UTR
CTACACCTGGTGCTTTACAA+GGG 0.676164 tig0019461:+122924 Msa1373700:five_prime_UTR
TGCCTAATACCCTTCCACAG+TGG 0.684739 tig0019461:-124009 None:intergenic
TTTGTGGTACCATCAAGTGG+AGG 0.686360 tig0019461:+124619 Msa1373700:five_prime_UTR
TTTGAATGATGAGAATCAGA+AGG 0.688179 tig0019461:+123900 Msa1373700:five_prime_UTR
GATCATCTGATATTGATGCA+CGG 0.689708 tig0019461:+124460 Msa1373700:five_prime_UTR
TTTACCTTTGGTCTACAGCG+TGG 0.689931 tig0019461:+127095 Msa1373700:CDS
TCGGCACATATGAAGCAGGA+GGG 0.691493 tig0019461:-123069 None:intergenic
GATTCTGATGCTACCCCGGG+TGG 0.691708 tig0019461:+122689 Msa1373700:five_prime_UTR
GAACATCAAACTGCTGACCA+CGG 0.695420 tig0019461:-123168 None:intergenic
GTTCCTAAAGAAGCTCCTGG+TGG 0.695657 tig0019461:+123187 Msa1373700:five_prime_UTR
GTTGAGATAGCAAACAAGGT+CGG 0.698379 tig0019461:+124333 Msa1373700:five_prime_UTR
ATGAGACACCGACGCCAGGG+AGG 0.700898 tig0019461:+122660 Msa1373700:five_prime_UTR
ATTAACAGTACTAACGACGC+CGG 0.702421 tig0019461:+122173 Msa1373700:five_prime_UTR
TTGATGGTACCACAAATCTG+AGG 0.705271 tig0019461:-124612 None:intergenic
CCGGGTGGTGTAACACCTGG+TGG 0.707118 tig0019461:+122704 Msa1373700:five_prime_UTR
TAATTGATGCTACTCCTGGG+AGG 0.712647 tig0019461:+122624 Msa1373700:five_prime_UTR
GATCAGCAATCCTACCCACA+AGG 0.716041 tig0019461:-124935 None:intergenic
ACGCAGCCAGCACCTTACCA+CGG 0.717063 tig0019461:-124035 None:intergenic
GTGAAGATGATTACCGGAGA+CGG 0.717111 tig0019461:+122234 Msa1373700:five_prime_UTR
ACTCGGTGTTGAAGCCACTG+TGG 0.723264 tig0019461:+123995 Msa1373700:five_prime_UTR
GAATCGTGTGTGCACTACTG+TGG 0.732596 tig0019461:+125145 Msa1373700:five_prime_UTR
GAAGCAGTGTGTGAGCACCG+AGG 0.745244 tig0019461:+124197 Msa1373700:five_prime_UTR
CAGATTCCGGAAGAGAACCG+TGG 0.747641 tig0019461:+123151 Msa1373700:five_prime_UTR
GACGCAGCAAAGTTTCTACG+AGG 0.759184 tig0019461:-122125 None:intergenic
TGTCATGAAGCAGTGCCATG+AGG 0.764533 tig0019461:+124704 Msa1373700:five_prime_UTR
AGAATGGTACACCACCACAG+AGG 0.792391 tig0019461:+123335 Msa1373700:five_prime_UTR
AAGGGTATTAGGCAACACCG+TGG 0.809985 tig0019461:+124018 Msa1373700:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGACTTAATAAAAAAT+TGG - tig0019461:126216-126235 None:intergenic 10.0%
!!! ATTTTTTATTAAGTCATTAT+AGG + tig0019461:126216-126235 Msa1373700:intron 10.0%
!!! TAAATTTTTTTTTTTTTTGC+AGG + tig0019461:127266-127285 Msa1373700:intron 10.0%
!!! TCTTCTTAAATATTTTACTA+TGG + tig0019461:126422-126441 Msa1373700:intron 15.0%
!! TGATAGAGTTCTTTATAAAT+TGG + tig0019461:123489-123508 Msa1373700:five_prime_UTR 20.0%
!! TCTTTATAAATTGGATGAAT+TGG + tig0019461:123498-123517 Msa1373700:five_prime_UTR 20.0%
!! ATAACATTGATGAATATGTT+AGG + tig0019461:123674-123693 Msa1373700:five_prime_UTR 20.0%
!! ATTTATAACTCTCTGTATAT+TGG + tig0019461:125626-125645 Msa1373700:five_prime_UTR 20.0%
!! ACATTACAGGAAAAAAATAA+GGG - tig0019461:125926-125945 None:intergenic 20.0%
!! AACATTACAGGAAAAAAATA+AGG - tig0019461:125927-125946 None:intergenic 20.0%
!!! AATCCTTTTATGAAATAGTT+TGG + tig0019461:126028-126047 Msa1373700:intron 20.0%
!! AAACCAAACTATTTCATAAA+AGG - tig0019461:126034-126053 None:intergenic 20.0%
!!! TTTTATGAAATAGTTTGGTT+TGG + tig0019461:126033-126052 Msa1373700:intron 20.0%
!!! TTTATGAAATAGTTTGGTTT+GGG + tig0019461:126034-126053 Msa1373700:intron 20.0%
!! ATGACTTAATAAAAAATTGG+AGG - tig0019461:126213-126232 None:intergenic 20.0%
!!! CATTTTTTTAACAGAGTATA+TGG - tig0019461:126307-126326 None:intergenic 20.0%
!! GTAAAATAGAATGAAATCAT+GGG - tig0019461:126450-126469 None:intergenic 20.0%
!! AGTAAAATAGAATGAAATCA+TGG - tig0019461:126451-126470 None:intergenic 20.0%
!! AGAAAAATGGAATAAAATCA+AGG - tig0019461:126484-126503 None:intergenic 20.0%
!!! TTGATTTTATTCCATTTTTC+TGG + tig0019461:126483-126502 Msa1373700:intron 20.0%
!! AAATATGATTTCTTTATCGT+AGG + tig0019461:127511-127530 Msa1373700:three_prime_UTR 20.0%
!! CTGAAGATTATCAGTATTTT+GGG + tig0019461:123227-123246 Msa1373700:five_prime_UTR 25.0%
!! TGAAGATTATCAGTATTTTG+GGG + tig0019461:123228-123247 Msa1373700:five_prime_UTR 25.0%
! ATAAATTGGATGAATTGGTT+CGG + tig0019461:123503-123522 Msa1373700:five_prime_UTR 25.0%
!! ATTTTCTTCATTTCTTCATC+AGG - tig0019461:124162-124181 None:intergenic 25.0%
!!! GAAGAAAATTGTTTTGAAAG+TGG + tig0019461:124173-124192 Msa1373700:five_prime_UTR 25.0%
!! GATATCAGTTCTAATATACT+CGG - tig0019461:124232-124251 None:intergenic 25.0%
! AACTCTATTGAATAATCTCA+AGG + tig0019461:125109-125128 Msa1373700:five_prime_UTR 25.0%
! TTTGAGTATATTGGTGAAAT+GGG + tig0019461:125287-125306 Msa1373700:five_prime_UTR 25.0%
!! AAACTTTTTGCACAAAAAAG+AGG - tig0019461:125817-125836 None:intergenic 25.0%
! TATTTCATACACAGATTCAA+CGG - tig0019461:125883-125902 None:intergenic 25.0%
!!! TGTATGTCTTTTTTCTTTCT+TGG + tig0019461:125998-126017 Msa1373700:intron 25.0%
! TTGGTTATAAATCAATCTGT+CGG + tig0019461:126174-126193 Msa1373700:intron 25.0%
!! GTATATGGTTAGTACTTTTA+AGG - tig0019461:126292-126311 None:intergenic 25.0%
! GTAAACAATCATGCTATTAA+TGG - tig0019461:126571-126590 None:intergenic 25.0%
! ACACATTTGATAGGTAATTA+TGG - tig0019461:126658-126677 None:intergenic 25.0%
! TTTGAATGTACACATTTGAT+AGG - tig0019461:126667-126686 None:intergenic 25.0%
!! TTTTCGGTTATGTTTTCATT+CGG + tig0019461:127390-127409 Msa1373700:three_prime_UTR 25.0%
!!! GTTTAAAATGTTACTTTGAG+AGG + tig0019461:127435-127454 Msa1373700:three_prime_UTR 25.0%
!! ATTGTTATTGTTCTGGTTCA+AGG - tig0019461:121921-121940 None:intergenic 30.0%
! CATGGTTATTGTTATTGTTC+TGG - tig0019461:121928-121947 None:intergenic 30.0%
CAGAACAATAACAATAACCA+TGG + tig0019461:121926-121945 Msa1373700:five_prime_UTR 30.0%
TAATCTTCAGGCTTCATAAA+AGG - tig0019461:123217-123236 None:intergenic 30.0%
CCAAAATACTGATAATCTTC+AGG - tig0019461:123229-123248 None:intergenic 30.0%
! CCTGAAGATTATCAGTATTT+TGG + tig0019461:123226-123245 Msa1373700:five_prime_UTR 30.0%
! CTTTTGCTTAAAGTGAAGAA+TGG + tig0019461:123319-123338 Msa1373700:five_prime_UTR 30.0%
ACAAGAATCTTATGCACATA+AGG - tig0019461:123529-123548 None:intergenic 30.0%
TAGTCTTCATCAATCAAAAG+GGG - tig0019461:123562-123581 None:intergenic 30.0%
GTAGTCTTCATCAATCAAAA+GGG - tig0019461:123563-123582 None:intergenic 30.0%
AGTAGTCTTCATCAATCAAA+AGG - tig0019461:123564-123583 None:intergenic 30.0%
TCATCAATGTTATCTATGTC+AGG - tig0019461:123667-123686 None:intergenic 30.0%
TTTGAATGATGAGAATCAGA+AGG + tig0019461:123900-123919 Msa1373700:five_prime_UTR 30.0%
TCAAAACTTTCAATACCGTA+GGG - tig0019461:123976-123995 None:intergenic 30.0%
AGTATAATAGCTGGCATATA+AGG - tig0019461:124100-124119 None:intergenic 30.0%
ATATGCCAGCTATTATACTA+AGG + tig0019461:124101-124120 Msa1373700:five_prime_UTR 30.0%
AAGTCATGCTTATTCTGATT+CGG + tig0019461:124124-124143 Msa1373700:five_prime_UTR 30.0%
! AGAAGTTTCTGAAAAACTCA+GGG - tig0019461:124257-124276 None:intergenic 30.0%
!! TGAGTTTTTCAGAAACTTCT+GGG + tig0019461:124257-124276 Msa1373700:five_prime_UTR 30.0%
ATGCTAATGTGATGCTTAAT+GGG + tig0019461:124541-124560 Msa1373700:five_prime_UTR 30.0%
! GTTAAATAACAAGAGTGCAA+AGG + tig0019461:124641-124660 Msa1373700:five_prime_UTR 30.0%
GTTGTCTTGTATGAATATCT+TGG + tig0019461:124750-124769 Msa1373700:five_prime_UTR 30.0%
AAAATTGAACCTAGAACTTC+GGG - tig0019461:124786-124805 None:intergenic 30.0%
CAAAATTGAACCTAGAACTT+CGG - tig0019461:124787-124806 None:intergenic 30.0%
!!! GAAGTTCTAGGTTCAATTTT+GGG + tig0019461:124786-124805 Msa1373700:five_prime_UTR 30.0%
AAGTCGATCGTTAATGTTAT+TGG + tig0019461:124816-124835 Msa1373700:five_prime_UTR 30.0%
!! TGACTCCAATTTTGAAGAAT+AGG + tig0019461:124883-124902 Msa1373700:five_prime_UTR 30.0%
TCATGCCTATTCTTCAAAAT+TGG - tig0019461:124891-124910 None:intergenic 30.0%
TCTTTCCTCTTTGAGTATAT+TGG + tig0019461:125278-125297 Msa1373700:five_prime_UTR 30.0%
TTTCACCAATATACTCAAAG+AGG - tig0019461:125286-125305 None:intergenic 30.0%
CTTTGAGTATATTGGTGAAA+TGG + tig0019461:125286-125305 Msa1373700:five_prime_UTR 30.0%
GGAGAAGTTTCAAATATGTT+TGG - tig0019461:125476-125495 None:intergenic 30.0%
GATTGCAATCATCTATGTAT+TGG + tig0019461:125739-125758 Msa1373700:exon 30.0%
! CTCTCTGAATTGTAGTATTT+TGG + tig0019461:125768-125787 Msa1373700:intron 30.0%
GAGGAACATGCATAAAAATT+AGG - tig0019461:125798-125817 None:intergenic 30.0%
GTTGTTAATCTGCAATTGAA+TGG + tig0019461:125857-125876 Msa1373700:intron 30.0%
TAATGTTGTGAATGCTGATA+AGG + tig0019461:125940-125959 Msa1373700:intron 30.0%
! GTATGTCTTTTTCTTCTTCT+TGG + tig0019461:126155-126174 Msa1373700:intron 30.0%
! GTTGGTCAAAGTTTTTATTG+AGG - tig0019461:126532-126551 None:intergenic 30.0%
!! AATCATGCTATTAATGGACT+TGG - tig0019461:126565-126584 None:intergenic 30.0%
ATAATGACCAAATTGGAAAG+AGG - tig0019461:126933-126952 None:intergenic 30.0%
GCTGTTTATAATGACCAAAT+TGG - tig0019461:126940-126959 None:intergenic 30.0%
TTTGGTCATTATAAACAGCT+TGG + tig0019461:126941-126960 Msa1373700:CDS 30.0%
AGCTTGGATAGTGAATTTAT+AGG + tig0019461:126957-126976 Msa1373700:CDS 30.0%
! AAGGTAAACTTTGAGAACAA+TGG - tig0019461:127083-127102 None:intergenic 30.0%
TTGTTCTCAAAGTTTACCTT+TGG + tig0019461:127083-127102 Msa1373700:CDS 30.0%
TTACTATGTTCTGTAGCAAT+TGG + tig0019461:127235-127254 Msa1373700:intron 30.0%
TTGTAATCTTTGCATGACAA+TGG + tig0019461:127336-127355 Msa1373700:three_prime_UTR 30.0%
! GTTATGTTTTCATTCGGTTA+AGG + tig0019461:127396-127415 Msa1373700:three_prime_UTR 30.0%
! TGGCTGAATTTAAGATTTGT+AGG - tig0019461:127571-127590 None:intergenic 30.0%
! TATGAAGTGTTTCGTGAAGA+AGG - tig0019461:121878-121897 None:intergenic 35.0%
TCACGAAACACTTCATATCT+AGG + tig0019461:121881-121900 Msa1373700:five_prime_UTR 35.0%
CACGAAACACTTCATATCTA+GGG + tig0019461:121882-121901 Msa1373700:five_prime_UTR 35.0%
GCAAGAATTACGTAAGAAGA+TGG + tig0019461:121974-121993 Msa1373700:five_prime_UTR 35.0%
TACTGAAGAAGAAGAAACTC+AGG + tig0019461:122088-122107 Msa1373700:five_prime_UTR 35.0%
CGTACCAAATTCATTATCTC+CGG - tig0019461:122195-122214 None:intergenic 35.0%
ATTGAATCAGATTCTTTCGC+CGG + tig0019461:122259-122278 Msa1373700:five_prime_UTR 35.0%
! TCAGCATAACTCCTTTTAGA+CGG - tig0019461:122326-122345 None:intergenic 35.0%
! GTTGATTTCGAAGAAGAAGA+AGG + tig0019461:122394-122413 Msa1373700:five_prime_UTR 35.0%
AAAAGGCTAAGACTTCTGAT+TGG + tig0019461:122537-122556 Msa1373700:five_prime_UTR 35.0%
AAAGGCTAAGACTTCTGATT+GGG + tig0019461:122538-122557 Msa1373700:five_prime_UTR 35.0%
CTCAACAAATTATACTGCTC+TGG - tig0019461:122959-122978 None:intergenic 35.0%
!! CAGAGCAGTATAATTTGTTG+AGG + tig0019461:122957-122976 Msa1373700:five_prime_UTR 35.0%
!! AGCAGTATAATTTGTTGAGG+TGG + tig0019461:122960-122979 Msa1373700:five_prime_UTR 35.0%
!! GCAGTATAATTTGTTGAGGT+GGG + tig0019461:122961-122980 Msa1373700:five_prime_UTR 35.0%
ATGCTATGTTTCCACAAGAA+GGG + tig0019461:123032-123051 Msa1373700:five_prime_UTR 35.0%
AAAACCTTATACCCTTCTTG+TGG - tig0019461:123046-123065 None:intergenic 35.0%
!! ACAAGAAGGGTATAAGGTTT+TGG + tig0019461:123045-123064 Msa1373700:five_prime_UTR 35.0%
GTTGAATGAAGAGAATGAAG+AGG + tig0019461:123255-123274 Msa1373700:five_prime_UTR 35.0%
! TTTGAGGCAGTTAACTGATA+AGG + tig0019461:123366-123385 Msa1373700:five_prime_UTR 35.0%
AGATTTCTTACTCTGACAGA+CGG - tig0019461:123773-123792 None:intergenic 35.0%
TCTGTCAGAGTAAGAAATCT+TGG + tig0019461:123773-123792 Msa1373700:five_prime_UTR 35.0%
!!! CAGCAAATTGCCATTTTGAT+TGG + tig0019461:123826-123845 Msa1373700:five_prime_UTR 35.0%
CTTGTGGAAATTATAGAGCA+TGG + tig0019461:123877-123896 Msa1373700:five_prime_UTR 35.0%
GTCAAAACTTTCAATACCGT+AGG - tig0019461:123977-123996 None:intergenic 35.0%
!!! CGGTATTGAAAGTTTTGACT+CGG + tig0019461:123978-123997 Msa1373700:five_prime_UTR 35.0%
CAACGGAATGATAAATCCAA+TGG - tig0019461:124070-124089 None:intergenic 35.0%
TGGATTTATCATTCCGTTGA+TGG + tig0019461:124071-124090 Msa1373700:five_prime_UTR 35.0%
GACTTCCTTAGTATAATAGC+TGG - tig0019461:124109-124128 None:intergenic 35.0%
AGTCATGCTTATTCTGATTC+GGG + tig0019461:124125-124144 Msa1373700:five_prime_UTR 35.0%
! CAGAAGTTTCTGAAAAACTC+AGG - tig0019461:124258-124277 None:intergenic 35.0%
!! CTGAGTTTTTCAGAAACTTC+TGG + tig0019461:124256-124275 Msa1373700:five_prime_UTR 35.0%
! TTTTCAGAAACTTCTGGGTT+AGG + tig0019461:124262-124281 Msa1373700:five_prime_UTR 35.0%
AAGAAACTACAAGCAACTTG+TGG + tig0019461:124302-124321 Msa1373700:five_prime_UTR 35.0%
GATCATCTGATATTGATGCA+CGG + tig0019461:124460-124479 Msa1373700:five_prime_UTR 35.0%
GATGCTAATGTGATGCTTAA+TGG + tig0019461:124540-124559 Msa1373700:five_prime_UTR 35.0%
!! AATGTGATGCTTAATGGGTT+CGG + tig0019461:124546-124565 Msa1373700:five_prime_UTR 35.0%
GTTATTTAACCTCCACTTGA+TGG - tig0019461:124631-124650 None:intergenic 35.0%
!!! CGAAGTTCTAGGTTCAATTT+TGG + tig0019461:124785-124804 Msa1373700:five_prime_UTR 35.0%
TTCAAAATTGGAGTCAACCT+GGG - tig0019461:124879-124898 None:intergenic 35.0%
GGATATATTGCAAAAGCCAT+CGG + tig0019461:125068-125087 Msa1373700:five_prime_UTR 35.0%
GATTATTCAATAGAGTTGCC+AGG - tig0019461:125106-125125 None:intergenic 35.0%
ATTGAATAATCTCAAGGTGC+AGG + tig0019461:125115-125134 Msa1373700:five_prime_UTR 35.0%
GTATATTGGTGAAATGGGAA+AGG + tig0019461:125292-125311 Msa1373700:five_prime_UTR 35.0%
ATCACAGCATTTATCACATG+TGG - tig0019461:125497-125516 None:intergenic 35.0%
ACATGTGATAAATGCTGTGA+TGG + tig0019461:125496-125515 Msa1373700:five_prime_UTR 35.0%
GTTCTTAATTACTGTCTCCA+AGG + tig0019461:125560-125579 Msa1373700:five_prime_UTR 35.0%
ATCAGCATTCACAACATTAC+AGG - tig0019461:125939-125958 None:intergenic 35.0%
CACATAACTGGCAAAAAGAA+GGG - tig0019461:126084-126103 None:intergenic 35.0%
ACACATAACTGGCAAAAAGA+AGG - tig0019461:126085-126104 None:intergenic 35.0%
TACGGCAGATTAATAATCCT+CGG + tig0019461:126117-126136 Msa1373700:intron 35.0%
AAAATTGGAGGATACAGTAC+AGG - tig0019461:126201-126220 None:intergenic 35.0%
GATTGACAACATAGATGTCA+TGG + tig0019461:126386-126405 Msa1373700:intron 35.0%
TGAAGTCAGAACCAGAAAAA+TGG - tig0019461:126497-126516 None:intergenic 35.0%
! GGACTTGGTTCAATATTTGT+TGG - tig0019461:126550-126569 None:intergenic 35.0%
! ATTATGGCATTGAGTTACAG+TGG - tig0019461:126642-126661 None:intergenic 35.0%
AACAAATGAAAGTTCAGCAG+AGG - tig0019461:126699-126718 None:intergenic 35.0%
TGTTCCTTTGTCAAAACTCA+TGG + tig0019461:126715-126734 Msa1373700:intron 35.0%
! AGATAGTACGAGACTGTTTT+CGG + tig0019461:127374-127393 Msa1373700:three_prime_UTR 35.0%
ATTAAGAAGCAACTAGAGAG+AGG - tig0019461:127488-127507 None:intergenic 35.0%
CGTCTTCTCGATTTCATCAT+CGG - tig0019461:121955-121974 None:intergenic 40.0%
ACCTTCGACACAGATCTTTA+CGG + tig0019461:122026-122045 Msa1373700:five_prime_UTR 40.0%
TCTTCAGTAGCAGGAATTGA+AGG - tig0019461:122077-122096 None:intergenic 40.0%
GTTTCTTCTTCTTCAGTAGC+AGG - tig0019461:122086-122105 None:intergenic 40.0%
AGAAGAAGAAACTCAGGATG+CGG + tig0019461:122094-122113 Msa1373700:five_prime_UTR 40.0%
CTGTTAATCGGAGCAATTAC+AGG - tig0019461:122161-122180 None:intergenic 40.0%
GCGTCGTTAGTACTGTTAAT+CGG - tig0019461:122173-122192 None:intergenic 40.0%
ATTAACAGTACTAACGACGC+CGG + tig0019461:122173-122192 Msa1373700:five_prime_UTR 40.0%
ATGAATTTGGTACGTCTCGA+AGG + tig0019461:122201-122220 Msa1373700:five_prime_UTR 40.0%
TTGACCGTGAAGATGATTAC+CGG + tig0019461:122228-122247 Msa1373700:five_prime_UTR 40.0%
! TAACTCCTTTTAGACGGATC+CGG - tig0019461:122320-122339 None:intergenic 40.0%
TTCGAAGAAGAAGAAGGAAG+AGG + tig0019461:122400-122419 Msa1373700:five_prime_UTR 40.0%
ATGGGATCAGAATCAGAATC+TGG + tig0019461:122499-122518 Msa1373700:five_prime_UTR 40.0%
AGAGTAATTGATGCTACTCC+TGG + tig0019461:122620-122639 Msa1373700:five_prime_UTR 40.0%
GAGTAATTGATGCTACTCCT+GGG + tig0019461:122621-122640 Msa1373700:five_prime_UTR 40.0%
GATGAAACACCTGCTACTAT+GGG + tig0019461:122815-122834 Msa1373700:five_prime_UTR 40.0%
!! ATAATTTGTTGAGGTGGGAG+AGG + tig0019461:122966-122985 Msa1373700:five_prime_UTR 40.0%
!! TAATTTGTTGAGGTGGGAGA+GGG + tig0019461:122967-122986 Msa1373700:five_prime_UTR 40.0%
TCAAGCTCTTCATCAGTCAA+AGG - tig0019461:123013-123032 None:intergenic 40.0%
GATGCTATGTTTCCACAAGA+AGG + tig0019461:123031-123050 Msa1373700:five_prime_UTR 40.0%
! GTTTCCACAAGAAGGGTATA+AGG + tig0019461:123039-123058 Msa1373700:five_prime_UTR 40.0%
TCTTCCGGAATCTGATAAAG+CGG - tig0019461:123145-123164 None:intergenic 40.0%
TTCATAAAAGGCAAACCACC+AGG - tig0019461:123205-123224 None:intergenic 40.0%
AAAGTAGGCTGCATAAGCAA+CGG - tig0019461:123433-123452 None:intergenic 40.0%
TAACCAAAAGATGCCTCTCT+TGG - tig0019461:123462-123481 None:intergenic 40.0%
!!! AGAGAGGCATCTTTTGGTTA+AGG + tig0019461:123462-123481 Msa1373700:five_prime_UTR 40.0%
TCTAATCTCAGTAAAGCTGC+TGG + tig0019461:123613-123632 Msa1373700:five_prime_UTR 40.0%
CTAATCTCAGTAAAGCTGCT+GGG + tig0019461:123614-123633 Msa1373700:five_prime_UTR 40.0%
TTCAAGAAGGGCAATAAAGC+AGG - tig0019461:123748-123767 None:intergenic 40.0%
! TGCTTTATTGCCCTTCTTGA+AGG + tig0019461:123747-123766 Msa1373700:five_prime_UTR 40.0%
GTAAGAAATCTTGGCAAGCT+CGG + tig0019461:123782-123801 Msa1373700:five_prime_UTR 40.0%
CACAGCACAACCAATCAAAA+TGG - tig0019461:123839-123858 None:intergenic 40.0%
TTCCACAAGAGATCTCAGAT+GGG - tig0019461:123866-123885 None:intergenic 40.0%
TTTCCACAAGAGATCTCAGA+TGG - tig0019461:123867-123886 None:intergenic 40.0%
GCATATAAGGCTTCCATCAA+CGG - tig0019461:124087-124106 None:intergenic 40.0%
! AGTTTCTGAAAAACTCAGGG+AGG - tig0019461:124254-124273 None:intergenic 40.0%
AACGGTTGAGATAGCAAACA+AGG + tig0019461:124329-124348 Msa1373700:five_prime_UTR 40.0%
GTTGAGATAGCAAACAAGGT+CGG + tig0019461:124333-124352 Msa1373700:five_prime_UTR 40.0%
AAGATGAGAGTGAACCTTAC+AGG + tig0019461:124394-124413 Msa1373700:five_prime_UTR 40.0%
GGTCATGGAAACTATTGAGA+AGG + tig0019461:124422-124441 Msa1373700:five_prime_UTR 40.0%
CATGGAAACTATTGAGAAGG+TGG + tig0019461:124425-124444 Msa1373700:five_prime_UTR 40.0%
ATCTGATATTGATGCACGGT+TGG + tig0019461:124464-124483 Msa1373700:five_prime_UTR 40.0%
!! TTGGAGGAGCTTTTGATTGA+TGG + tig0019461:124483-124502 Msa1373700:five_prime_UTR 40.0%
CATCACATTAGCATCATCAC+TGG - tig0019461:124535-124554 None:intergenic 40.0%
CCACAAATCTGAGGAAGATA+TGG - tig0019461:124606-124625 None:intergenic 40.0%
CCATATCTTCCTCAGATTTG+TGG + tig0019461:124603-124622 Msa1373700:five_prime_UTR 40.0%
! TTGATGGTACCACAAATCTG+AGG - tig0019461:124615-124634 None:intergenic 40.0%
AGATTTGTGGTACCATCAAG+TGG + tig0019461:124616-124635 Msa1373700:five_prime_UTR 40.0%
! ATAACAAGAGTGCAAAGGTG+AGG + tig0019461:124646-124665 Msa1373700:five_prime_UTR 40.0%
CAACAGCAATTCTCGAAATG+AGG - tig0019461:124686-124705 None:intergenic 40.0%
TGCCATGAGGAACAATTGAT+GGG + tig0019461:124717-124736 Msa1373700:five_prime_UTR 40.0%
! GAACAATTGATGGGTCATCT+TGG + tig0019461:124726-124745 Msa1373700:five_prime_UTR 40.0%
CTTCAAAATTGGAGTCAACC+TGG - tig0019461:124880-124899 None:intergenic 40.0%
! GAGAACTGTATTGACCTTGT+GGG + tig0019461:124921-124940 Msa1373700:five_prime_UTR 40.0%
TGAGCTTCTTGAGATGCTTA+AGG + tig0019461:125004-125023 Msa1373700:five_prime_UTR 40.0%
ATGCTTAAGGCACACAAGAA+GGG + tig0019461:125017-125036 Msa1373700:five_prime_UTR 40.0%
AGAGCTACTGTGAACACTTT+CGG + tig0019461:125047-125066 Msa1373700:five_prime_UTR 40.0%
TGTCTCTGCAACAATAGCAA+TGG - tig0019461:125171-125190 None:intergenic 40.0%
AATGCTGGCAAAACTGTGAA+GGG - tig0019461:125200-125219 None:intergenic 40.0%
CGATACTCATTCATCAATGC+TGG - tig0019461:125215-125234 None:intergenic 40.0%
! CCATTTTGCACGTTAAGTTC+TGG - tig0019461:125242-125261 None:intergenic 40.0%
CCAGAACTTAACGTGCAAAA+TGG + tig0019461:125239-125258 Msa1373700:five_prime_UTR 40.0%
! TCCATTTGCTGAACTATGTC+TGG + tig0019461:125450-125469 Msa1373700:five_prime_UTR 40.0%
AATTCTCAATCAGCACTGTG+TGG + tig0019461:125972-125991 Msa1373700:intron 40.0%
! TTTTTGCCAGTTATGTGTCG+TGG + tig0019461:126087-126106 Msa1373700:intron 40.0%
!! ACGTCCATGAGTTTTGACAA+AGG - tig0019461:126722-126741 None:intergenic 40.0%
AAAACTCATGGACGTTCACA+TGG + tig0019461:126727-126746 Msa1373700:intron 40.0%
GATTCAAGCATCACAACTGT+TGG + tig0019461:126865-126884 Msa1373700:CDS 40.0%
CACATGTCCTCTTTCCAATT+TGG + tig0019461:126923-126942 Msa1373700:CDS 40.0%
AGCAAATCACACACTATGCA+AGG - tig0019461:126987-127006 None:intergenic 40.0%
GTGGTTTAGGTGATGAGTTT+AGG + tig0019461:127114-127133 Msa1373700:CDS 40.0%
! TACCTTCTTCCCCATTTTGA+AGG - tig0019461:127174-127193 None:intergenic 40.0%
AAATGACACCAAACAACTCG+AGG - tig0019461:127213-127232 None:intergenic 40.0%
GATTTCATCATCGGAAGCCA+TGG - tig0019461:121946-121965 None:intergenic 45.0%
AACTTTGCTGCGTCAATCAC+CGG + tig0019461:122134-122153 Msa1373700:five_prime_UTR 45.0%
AATCGGAGCAATTACAGGAC+CGG - tig0019461:122156-122175 None:intergenic 45.0%
GACGCCGGAGATAATGAATT+TGG + tig0019461:122188-122207 Msa1373700:five_prime_UTR 45.0%
GTCTCCGGTAATCATCTTCA+CGG - tig0019461:122235-122254 None:intergenic 45.0%
GTGAAGATGATTACCGGAGA+CGG + tig0019461:122234-122253 Msa1373700:five_prime_UTR 45.0%
TCTGATTCAATCTCCGTCTC+CGG - tig0019461:122250-122269 None:intergenic 45.0%
!! GCAAAAGCATCATGTCGATC+CGG - tig0019461:122281-122300 None:intergenic 45.0%
!! TGAGAGATGAAGCGTTGAAG+AGG + tig0019461:122351-122370 Msa1373700:five_prime_UTR 45.0%
!! GAGAGATGAAGCGTTGAAGA+GGG + tig0019461:122352-122371 Msa1373700:five_prime_UTR 45.0%
GGGAGAGAGAGGAAACAATT+AGG + tig0019461:122372-122391 Msa1373700:five_prime_UTR 45.0%
AAGAAGGAAGAGGAAGAAGC+TGG + tig0019461:122410-122429 Msa1373700:five_prime_UTR 45.0%
! GATTTTTCCTTCTCCTGCAC+AGG - tig0019461:122446-122465 None:intergenic 45.0%
AGCAGAATCAACAGCAGAAG+AGG + tig0019461:122468-122487 Msa1373700:five_prime_UTR 45.0%
AGAATCAACAGCAGAAGAGG+AGG + tig0019461:122471-122490 Msa1373700:five_prime_UTR 45.0%
AGCAGAAGAGGAGGAATAGA+TGG + tig0019461:122480-122499 Msa1373700:five_prime_UTR 45.0%
GCAGAAGAGGAGGAATAGAT+GGG + tig0019461:122481-122500 Msa1373700:five_prime_UTR 45.0%
GGATCAGAATCAGAATCTGG+AGG + tig0019461:122502-122521 Msa1373700:five_prime_UTR 45.0%
CAGAATCAGAATCTGGAGGA+AGG + tig0019461:122506-122525 Msa1373700:five_prime_UTR 45.0%
AATCAGAATCTGGAGGAAGG+TGG + tig0019461:122509-122528 Msa1373700:five_prime_UTR 45.0%
ATTCGAATGCGATGACACCA+GGG + tig0019461:122570-122589 Msa1373700:five_prime_UTR 45.0%
TCAATTACTCTCCCAGGAGT+TGG - tig0019461:122611-122630 None:intergenic 45.0%
GTAGCATCAATTACTCTCCC+AGG - tig0019461:122617-122636 None:intergenic 45.0%
TAATTGATGCTACTCCTGGG+AGG + tig0019461:122624-122643 Msa1373700:five_prime_UTR 45.0%
GATGCTACTCCTAAGCTTAG+TGG + tig0019461:122752-122771 Msa1373700:five_prime_UTR 45.0%
CATCTCGATCTCTGTCTCTT+CGG - tig0019461:122794-122813 None:intergenic 45.0%
GAAGAGACAGAGATCGAGAT+GGG + tig0019461:122793-122812 Msa1373700:five_prime_UTR 45.0%
GGATGAAACACCTGCTACTA+TGG + tig0019461:122814-122833 Msa1373700:five_prime_UTR 45.0%
GTTACACTTCCCATAGTAGC+AGG - tig0019461:122827-122846 None:intergenic 45.0%
! GGAAGTGTAACACCATTACC+TGG + tig0019461:122836-122855 Msa1373700:five_prime_UTR 45.0%
!! TCCTGTTGGTGGTGTTGAAT+TGG + tig0019461:122895-122914 Msa1373700:five_prime_UTR 45.0%
CTACACCTGGTGCTTTACAA+GGG + tig0019461:122924-122943 Msa1373700:five_prime_UTR 45.0%
CTAATCGGCACATATGAAGC+AGG - tig0019461:123076-123095 None:intergenic 45.0%
!! CTGCTTCATATGTGCCGATT+AGG + tig0019461:123074-123093 Msa1373700:five_prime_UTR 45.0%
TTCCTTGCAGGTGTCCTAAT+CGG - tig0019461:123091-123110 None:intergenic 45.0%
GACTCCGCTTTATCAGATTC+CGG + tig0019461:123138-123157 Msa1373700:five_prime_UTR 45.0%
GAACATCAAACTGCTGACCA+CGG - tig0019461:123171-123190 None:intergenic 45.0%
GATGTTCCTAAAGAAGCTCC+TGG + tig0019461:123184-123203 Msa1373700:five_prime_UTR 45.0%
AAACCACCAGGAGCTTCTTT+AGG - tig0019461:123193-123212 None:intergenic 45.0%
GAATGAAGAGGAGTTGTCTC+CGG + tig0019461:123267-123286 Msa1373700:five_prime_UTR 45.0%
TTCCTCTCTTTCTGCTCATC+CGG - tig0019461:123289-123308 None:intergenic 45.0%
!! AAAGCTGTTTTCCTCTGTGG+TGG - tig0019461:123349-123368 None:intergenic 45.0%
!! CTCAAAGCTGTTTTCCTCTG+TGG - tig0019461:123352-123371 None:intergenic 45.0%
CACAGAGGAAAACAGCTTTG+AGG + tig0019461:123350-123369 Msa1373700:five_prime_UTR 45.0%
GGCAGTATCCGGTTAAACAA+AGG - tig0019461:123412-123431 None:intergenic 45.0%
GTTGCTTATGCAGCCTACTT+TGG + tig0019461:123432-123451 Msa1373700:five_prime_UTR 45.0%
TTATTTCCCTCCCCTCAACA+CGG - tig0019461:123591-123610 None:intergenic 45.0%
CTACTATGATTGCTGCCATG+AGG + tig0019461:123641-123660 Msa1373700:five_prime_UTR 45.0%
GTTATCTATGTCAGGCCTCA+TGG - tig0019461:123659-123678 None:intergenic 45.0%
TCCACAAGAGATCTCAGATG+GGG - tig0019461:123865-123884 None:intergenic 45.0%
TATTAGGCAACACCGTGGTA+AGG + tig0019461:124023-124042 Msa1373700:five_prime_UTR 45.0%
!! GCTGCGTTTTTGAAAGCCAT+TGG + tig0019461:124051-124070 Msa1373700:five_prime_UTR 45.0%
! TCAGAAACTTCTGGGTTAGG+AGG + tig0019461:124265-124284 Msa1373700:five_prime_UTR 45.0%
! AAACTTCTGGGTTAGGAGGA+TGG + tig0019461:124269-124288 Msa1373700:five_prime_UTR 45.0%
CAAGCAACTTGTGGAGACAA+CGG + tig0019461:124311-124330 Msa1373700:five_prime_UTR 45.0%
!! GTCGGTGTTGCTGATATTGT+TGG + tig0019461:124351-124370 Msa1373700:five_prime_UTR 45.0%
TGAGAAGGTGGTCACTAACT+TGG + tig0019461:124437-124456 Msa1373700:five_prime_UTR 45.0%
GAGAAGGTGGTCACTAACTT+GGG + tig0019461:124438-124457 Msa1373700:five_prime_UTR 45.0%
TGATATTGATGCACGGTTGG+AGG + tig0019461:124467-124486 Msa1373700:five_prime_UTR 45.0%
TTTGTGGTACCATCAAGTGG+AGG + tig0019461:124619-124638 Msa1373700:five_prime_UTR 45.0%
GTGCCATGAGGAACAATTGA+TGG + tig0019461:124716-124735 Msa1373700:five_prime_UTR 45.0%
GACCCATCAATTGTTCCTCA+TGG - tig0019461:124722-124741 None:intergenic 45.0%
!! GAAGAGTATCCCGAAGTTCT+AGG + tig0019461:124774-124793 Msa1373700:five_prime_UTR 45.0%
GAAGATGACTCCACCTATCA+AGG + tig0019461:124845-124864 Msa1373700:five_prime_UTR 45.0%
GGAAGCAAATCCTTGATAGG+TGG - tig0019461:124858-124877 None:intergenic 45.0%
CTGGGAAGCAAATCCTTGAT+AGG - tig0019461:124861-124880 None:intergenic 45.0%
! CTATCAAGGATTTGCTTCCC+AGG + tig0019461:124859-124878 Msa1373700:five_prime_UTR 45.0%
GAATAGGCATGAGAAAGTCC+AGG + tig0019461:124899-124918 Msa1373700:five_prime_UTR 45.0%
CAAGGTCAATACAGTTCTCC+TGG - tig0019461:124920-124939 None:intergenic 45.0%
! GGAGAACTGTATTGACCTTG+TGG + tig0019461:124920-124939 Msa1373700:five_prime_UTR 45.0%
! ACTGTATTGACCTTGTGGGT+AGG + tig0019461:124925-124944 Msa1373700:five_prime_UTR 45.0%
AGTTTGTACCTGCCAGAGAA+TGG + tig0019461:124967-124986 Msa1373700:five_prime_UTR 45.0%
ACAGATCCTCATCCATTCTC+TGG - tig0019461:124982-125001 None:intergenic 45.0%
GATGCTTAAGGCACACAAGA+AGG + tig0019461:125016-125035 Msa1373700:five_prime_UTR 45.0%
ATAATCTCAAGGTGCAGGAG+AGG + tig0019461:125120-125139 Msa1373700:five_prime_UTR 45.0%
CAATGCTGGCAAAACTGTGA+AGG - tig0019461:125201-125220 None:intergenic 45.0%
! TGGACAGGGATTTGGTTCAT+AGG + tig0019461:125357-125376 Msa1373700:five_prime_UTR 45.0%
GCCAGACATAGTTCAGCAAA+TGG - tig0019461:125454-125473 None:intergenic 45.0%
! CTGTGATGGAAGCCATTGAA+GGG + tig0019461:125510-125529 Msa1373700:five_prime_UTR 45.0%
AGTACACCTCCCTAACTTTC+CGG - tig0019461:125601-125620 None:intergenic 45.0%
CTCTCTGTATATTGGAGCTC+AGG + tig0019461:125634-125653 Msa1373700:five_prime_UTR 45.0%
!! ATCCTCTAGTGATGGGTATG+CGG - tig0019461:125672-125691 None:intergenic 45.0%
TGTGCTCATCCTCTAGTGAT+GGG - tig0019461:125679-125698 None:intergenic 45.0%
TTGTGCTCATCCTCTAGTGA+TGG - tig0019461:125680-125699 None:intergenic 45.0%
ATGTGTCGTGGATGCTGATA+CGG + tig0019461:126099-126118 Msa1373700:intron 45.0%
TAGCATCCTGGTGTGAAACT+GGG - tig0019461:126361-126380 None:intergenic 45.0%
ATAGCATCCTGGTGTGAAAC+TGG - tig0019461:126362-126381 None:intergenic 45.0%
CAGCTACAGTGACAAAAGCA+AGG - tig0019461:126774-126793 None:intergenic 45.0%
!! CTTGCTTTTGTCACTGTAGC+TGG + tig0019461:126772-126791 Msa1373700:intron 45.0%
CTTCTCACATGCTTCCTGTT+GGG + tig0019461:126823-126842 Msa1373700:CDS 45.0%
GCTTGAATCTGCCAAACTTG+TGG - tig0019461:126854-126873 None:intergenic 45.0%
TTTACCTTTGGTCTACAGCG+TGG + tig0019461:127095-127114 Msa1373700:CDS 45.0%
TAAACCACGCTGTAGACCAA+AGG - tig0019461:127102-127121 None:intergenic 45.0%
TTTGGTCTACAGCGTGGTTT+AGG + tig0019461:127101-127120 Msa1373700:CDS 45.0%
TGCAATACCTGCCCTTACAA+GGG + tig0019461:127140-127159 Msa1373700:CDS 45.0%
GGACTGTCTGCCTTCAAAAT+GGG + tig0019461:127161-127180 Msa1373700:CDS 45.0%
GACTGTCTGCCTTCAAAATG+GGG + tig0019461:127162-127181 Msa1373700:CDS 45.0%
TGCCTTCAAAATGGGGAAGA+AGG + tig0019461:127169-127188 Msa1373700:CDS 45.0%
! TTTTTGCAGGTCGAACTGTC+CGG + tig0019461:127279-127298 Msa1373700:intron 45.0%
GCCGTAAAGATCTGTGTCGA+AGG - tig0019461:122030-122049 None:intergenic 50.0%
GACGCAGCAAAGTTTCTACG+AGG - tig0019461:122128-122147 None:intergenic 50.0%
! CGACATGATGCTTTTGCTGC+TGG + tig0019461:122284-122303 Msa1373700:five_prime_UTR 50.0%
AAACGCCGGATCCGTCTAAA+AGG + tig0019461:122312-122331 Msa1373700:five_prime_UTR 50.0%
GGAAGAGGAAGAAGCTGGTA+AGG + tig0019461:122415-122434 Msa1373700:five_prime_UTR 50.0%
GGAGGAAGGTGGTGTGAAAA+AGG + tig0019461:122520-122539 Msa1373700:five_prime_UTR 50.0%
GACTTCTGATTGGGATGCAC+CGG + tig0019461:122547-122566 Msa1373700:five_prime_UTR 50.0%
! GGTGTCATCGCATTCGAATC+CGG - tig0019461:122569-122588 None:intergenic 50.0%
GATTCGAATGCGATGACACC+AGG + tig0019461:122569-122588 Msa1373700:five_prime_UTR 50.0%
TCCTGGGAGGAGGAATAGAT+GGG + tig0019461:122637-122656 Msa1373700:five_prime_UTR 50.0%
TCAGAATCAACCAACCTCCC+TGG - tig0019461:122677-122696 None:intergenic 50.0%
! GGTTGATTCTGATGCTACCC+CGG + tig0019461:122685-122704 Msa1373700:five_prime_UTR 50.0%
! GTTGATTCTGATGCTACCCC+GGG + tig0019461:122686-122705 Msa1373700:five_prime_UTR 50.0%
GCTACTCCTAAGCTTAGTGG+CGG + tig0019461:122755-122774 Msa1373700:five_prime_UTR 50.0%
CTACTCCTAAGCTTAGTGGC+GGG + tig0019461:122756-122775 Msa1373700:five_prime_UTR 50.0%
GTAATCCCGCCACTAAGCTT+AGG - tig0019461:122764-122783 None:intergenic 50.0%
GATCTCTGTCTCTTCGGAGT+CGG - tig0019461:122788-122807 None:intergenic 50.0%
CGAAGAGACAGAGATCGAGA+TGG + tig0019461:122792-122811 Msa1373700:five_prime_UTR 50.0%
!! ACACCTGGTGTTACTCCTGT+TGG + tig0019461:122881-122900 Msa1373700:five_prime_UTR 50.0%
GCCAATTCAACACCACCAAC+AGG - tig0019461:122899-122918 None:intergenic 50.0%
GAATTGGCTACACCTACACC+TGG + tig0019461:122911-122930 Msa1373700:five_prime_UTR 50.0%
! CCTTGTAAAGCACCAGGTGT+AGG - tig0019461:122926-122945 None:intergenic 50.0%
CCTACACCTGGTGCTTTACA+AGG + tig0019461:122923-122942 Msa1373700:five_prime_UTR 50.0%
! AACGACCCTTGTAAAGCACC+AGG - tig0019461:122932-122951 None:intergenic 50.0%
GGGAGAGGGATATTGAAGAG+AGG + tig0019461:122981-123000 Msa1373700:five_prime_UTR 50.0%
TCGGCACATATGAAGCAGGA+GGG - tig0019461:123072-123091 None:intergenic 50.0%
ATCGGCACATATGAAGCAGG+AGG - tig0019461:123073-123092 None:intergenic 50.0%
GTAGCAAGAAGCTTCCTTGC+AGG - tig0019461:123103-123122 None:intergenic 50.0%
TGATAAAGCGGAGTCCCCAA+CGG - tig0019461:123133-123152 None:intergenic 50.0%
GTTCCTAAAGAAGCTCCTGG+TGG + tig0019461:123187-123206 Msa1373700:five_prime_UTR 50.0%
AGAATGGTACACCACCACAG+AGG + tig0019461:123335-123354 Msa1373700:five_prime_UTR 50.0%
ACTGATAAGGCTCGCGAGTT+TGG + tig0019461:123379-123398 Msa1373700:five_prime_UTR 50.0%
! GTGCTGGGCCTTTGTTTAAC+CGG + tig0019461:123401-123420 Msa1373700:five_prime_UTR 50.0%
GCATAAGCAACGGCAGTATC+CGG - tig0019461:123423-123442 None:intergenic 50.0%
GCTTATGCAGCCTACTTTGG+AGG + tig0019461:123435-123454 Msa1373700:five_prime_UTR 50.0%
CTCTCTTGGTCCTCCAAAGT+AGG - tig0019461:123448-123467 None:intergenic 50.0%
! CTACTTTGGAGGACCAAGAG+AGG + tig0019461:123446-123465 Msa1373700:five_prime_UTR 50.0%
!!! GGACCAAGAGAGGCATCTTT+TGG + tig0019461:123456-123475 Msa1373700:five_prime_UTR 50.0%
AGACTACTATGCCCGTGTTG+AGG + tig0019461:123576-123595 Msa1373700:five_prime_UTR 50.0%
GACTACTATGCCCGTGTTGA+GGG + tig0019461:123577-123596 Msa1373700:five_prime_UTR 50.0%
ACTACTATGCCCGTGTTGAG+GGG + tig0019461:123578-123597 Msa1373700:five_prime_UTR 50.0%
TATTTCCCTCCCCTCAACAC+GGG - tig0019461:123590-123609 None:intergenic 50.0%
TCTCAGTAAAGCTGCTGGGT+TGG + tig0019461:123618-123637 Msa1373700:five_prime_UTR 50.0%
! AGTGTCGTTGCATCTGCTCT+CGG + tig0019461:123718-123737 Msa1373700:five_prime_UTR 50.0%
TGACAGACGGCCTTCAAGAA+GGG - tig0019461:123760-123779 None:intergenic 50.0%
GTGTTGAAGCCACTGTGGAA+GGG + tig0019461:124000-124019 Msa1373700:five_prime_UTR 50.0%
!! AGCCACTGTGGAAGGGTATT+AGG + tig0019461:124007-124026 Msa1373700:five_prime_UTR 50.0%
TGCCTAATACCCTTCCACAG+TGG - tig0019461:124012-124031 None:intergenic 50.0%
!! AAGGGTATTAGGCAACACCG+TGG + tig0019461:124018-124037 Msa1373700:five_prime_UTR 50.0%
GAGTGAACCTTACAGGCGAA+TGG + tig0019461:124401-124420 Msa1373700:five_prime_UTR 50.0%
ACCTTACAGGCGAATGGTCA+TGG + tig0019461:124407-124426 Msa1373700:five_prime_UTR 50.0%
TCCATGACCATTCGCCTGTA+AGG - tig0019461:124411-124430 None:intergenic 50.0%
! ATCACTGGTCTGCTCTTGGA+AGG - tig0019461:124520-124539 None:intergenic 50.0%
! CATCATCACTGGTCTGCTCT+TGG - tig0019461:124524-124543 None:intergenic 50.0%
TGTCATGAAGCAGTGCCATG+AGG + tig0019461:124704-124723 Msa1373700:five_prime_UTR 50.0%
GATCAGCAATCCTACCCACA+AGG - tig0019461:124938-124957 None:intergenic 50.0%
TGGGTAGGATTGCTGATCGT+GGG + tig0019461:124940-124959 Msa1373700:five_prime_UTR 50.0%
TACCTGCCAGAGAATGGATG+AGG + tig0019461:124973-124992 Msa1373700:five_prime_UTR 50.0%
ATCCTCATCCATTCTCTGGC+AGG - tig0019461:124978-124997 None:intergenic 50.0%
GAATCGTGTGTGCACTACTG+TGG + tig0019461:125145-125164 Msa1373700:five_prime_UTR 50.0%
!! ATGAGAGCATCCTCGAGCAA+AGG - tig0019461:125338-125357 None:intergenic 50.0%
TTTGCTCGAGGATGCTCTCA+TGG + tig0019461:125337-125356 Msa1373700:five_prime_UTR 50.0%
TGCTCTCATGGACAGGGATT+TGG + tig0019461:125349-125368 Msa1373700:five_prime_UTR 50.0%
! GCTGTGATGGAAGCCATTGA+AGG + tig0019461:125509-125528 Msa1373700:five_prime_UTR 50.0%
TGGAAGCCATTGAAGGGATG+AGG + tig0019461:125516-125535 Msa1373700:five_prime_UTR 50.0%
GGAAGCCATTGAAGGGATGA+GGG + tig0019461:125517-125536 Msa1373700:five_prime_UTR 50.0%
TGCTACCCTCATCCCTTCAA+TGG - tig0019461:125525-125544 None:intergenic 50.0%
TGAAGGGATGAGGGTAGCAT+TGG + tig0019461:125526-125545 Msa1373700:five_prime_UTR 50.0%
GAAGGGATGAGGGTAGCATT+GGG + tig0019461:125527-125546 Msa1373700:five_prime_UTR 50.0%
GTACACCTCCCTAACTTTCC+GGG - tig0019461:125600-125619 None:intergenic 50.0%
! GGAAAGTTAGGGAGGTGTAC+TGG + tig0019461:125600-125619 Msa1373700:five_prime_UTR 50.0%
CAGCATCCACGACACATAAC+TGG - tig0019461:126096-126115 None:intergenic 50.0%
TGTGAAACTGGGATACCAGG+AGG - tig0019461:126350-126369 None:intergenic 50.0%
TGGTGTGAAACTGGGATACC+AGG - tig0019461:126353-126372 None:intergenic 50.0%
TGGTATCCCAGTTTCACACC+AGG + tig0019461:126352-126371 Msa1373700:intron 50.0%
GTCAATCGCGAATAGCATCC+TGG - tig0019461:126373-126392 None:intergenic 50.0%
! GCTTTTGTCACTGTAGCTGG+AGG + tig0019461:126775-126794 Msa1373700:intron 50.0%
! CCAACAGGAAGCATGTGAGA+AGG - tig0019461:126825-126844 None:intergenic 50.0%
CCTTCTCACATGCTTCCTGT+TGG + tig0019461:126822-126841 Msa1373700:CDS 50.0%
CTGCAATACCTGCCCTTACA+AGG + tig0019461:127139-127158 Msa1373700:CDS 50.0%
AGGCAGACAGTCCCTTGTAA+GGG - tig0019461:127154-127173 None:intergenic 50.0%
AAGGCAGACAGTCCCTTGTA+AGG - tig0019461:127155-127174 None:intergenic 50.0%
GGGACTGTCTGCCTTCAAAA+TGG + tig0019461:127160-127179 Msa1373700:CDS 50.0%
GACACCAAACAACTCGAGGA+GGG - tig0019461:127209-127228 None:intergenic 50.0%
TGACACCAAACAACTCGAGG+AGG - tig0019461:127210-127229 None:intergenic 50.0%
TTCTGCAGCAAGCCAGTTAC+CGG - tig0019461:127301-127320 None:intergenic 50.0%
TGCTGCTGGTGAGAAAACGC+CGG + tig0019461:122298-122317 Msa1373700:five_prime_UTR 55.0%
! AGCGTTGAAGAGGGAGAGAG+AGG + tig0019461:122361-122380 Msa1373700:five_prime_UTR 55.0%
ATGCGATGACACCAGGGAGA+TGG + tig0019461:122576-122595 Msa1373700:five_prime_UTR 55.0%
TGCGATGACACCAGGGAGAT+GGG + tig0019461:122577-122596 Msa1373700:five_prime_UTR 55.0%
TGGGATGCTACTCCAACTCC+TGG + tig0019461:122596-122615 Msa1373700:five_prime_UTR 55.0%
GGGATGCTACTCCAACTCCT+GGG + tig0019461:122597-122616 Msa1373700:five_prime_UTR 55.0%
TTGATGCTACTCCTGGGAGG+AGG + tig0019461:122627-122646 Msa1373700:five_prime_UTR 55.0%
CTCCTGGGAGGAGGAATAGA+TGG + tig0019461:122636-122655 Msa1373700:five_prime_UTR 55.0%
TCCCATCTATTCCTCCTCCC+AGG - tig0019461:122641-122660 None:intergenic 55.0%
!! TCACACCTGGTGGTGCTACT+TGG + tig0019461:122729-122748 Msa1373700:five_prime_UTR 55.0%
!! CACACCTGGTGGTGCTACTT+GGG + tig0019461:122730-122749 Msa1373700:five_prime_UTR 55.0%
GCAGGTGTAGCACCAGGTAA+TGG - tig0019461:122851-122870 None:intergenic 55.0%
CCACCAACAGGAGTAACACC+AGG - tig0019461:122887-122906 None:intergenic 55.0%
!! CCTGGTGTTACTCCTGTTGG+TGG + tig0019461:122884-122903 Msa1373700:five_prime_UTR 55.0%
! TGCCGATTAGGACACCTGCA+AGG + tig0019461:123086-123105 Msa1373700:five_prime_UTR 55.0%
TCTTGCTACACCTACGCCGT+TGG + tig0019461:123114-123133 Msa1373700:five_prime_UTR 55.0%
CTTGCTACACCTACGCCGTT+GGG + tig0019461:123115-123134 Msa1373700:five_prime_UTR 55.0%
TTGCTACACCTACGCCGTTG+GGG + tig0019461:123116-123135 Msa1373700:five_prime_UTR 55.0%
CAGATTCCGGAAGAGAACCG+TGG + tig0019461:123151-123170 Msa1373700:five_prime_UTR 55.0%
TGCTGACCACGGTTCTCTTC+CGG - tig0019461:123160-123179 None:intergenic 55.0%
CTCCGGATGAGCAGAAAGAG+AGG + tig0019461:123284-123303 Msa1373700:five_prime_UTR 55.0%
CTGACAGACGGCCTTCAAGA+AGG - tig0019461:123761-123780 None:intergenic 55.0%
! GCCCCATCTGAGATCTCTTG+TGG + tig0019461:123861-123880 Msa1373700:five_prime_UTR 55.0%
AGCAGCAGCTTCAGCAAGTG+CGG - tig0019461:123953-123972 None:intergenic 55.0%
!! ACTCGGTGTTGAAGCCACTG+TGG + tig0019461:123995-124014 Msa1373700:five_prime_UTR 55.0%
! GGTGTTGAAGCCACTGTGGA+AGG + tig0019461:123999-124018 Msa1373700:five_prime_UTR 55.0%
!! AAGCAGTGTGTGAGCACCGA+GGG + tig0019461:124198-124217 Msa1373700:five_prime_UTR 55.0%
ATACTCGGCTTCCACACCCT+CGG - tig0019461:124217-124236 None:intergenic 55.0%
! CTGGGTTAGGAGGATGGCTT+TGG + tig0019461:124275-124294 Msa1373700:five_prime_UTR 55.0%
GGCGCAGTTGTAAACTCGCT+CGG + tig0019461:124567-124586 Msa1373700:five_prime_UTR 55.0%
GCGCAGTTGTAAACTCGCTC+GGG + tig0019461:124568-124587 Msa1373700:five_prime_UTR 55.0%
GTGGGTAGGATTGCTGATCG+TGG + tig0019461:124939-124958 Msa1373700:five_prime_UTR 55.0%
GGGTAGGATTGCTGATCGTG+GGG + tig0019461:124941-124960 Msa1373700:five_prime_UTR 55.0%
TGCAAAAGCCATCGGTCCAC+AGG + tig0019461:125076-125095 Msa1373700:five_prime_UTR 55.0%
AGAGTTGCCAGGACATCCTG+TGG - tig0019461:125095-125114 None:intergenic 55.0%
TGCTGTGACTCCTTTGCTCG+AGG + tig0019461:125325-125344 Msa1373700:five_prime_UTR 55.0%
TCGAGGATGCTCTCATGGAC+AGG + tig0019461:125342-125361 Msa1373700:five_prime_UTR 55.0%
CGAGGATGCTCTCATGGACA+GGG + tig0019461:125343-125362 Msa1373700:five_prime_UTR 55.0%
TGCTTCTGCCGTGAAGCACA+TGG + tig0019461:125388-125407 Msa1373700:five_prime_UTR 55.0%
TCCCAGTGCCATGTGCTTCA+CGG - tig0019461:125399-125418 None:intergenic 55.0%
!! AGTGGCTGGTTTGGGTTGTG+AGG + tig0019461:125418-125437 Msa1373700:five_prime_UTR 55.0%
!! TTTGGGTTGTGAGGATGCGC+TGG + tig0019461:125427-125446 Msa1373700:five_prime_UTR 55.0%
AAGGATTGTTCCACCCTGCC+CGG + tig0019461:125579-125598 Msa1373700:five_prime_UTR 55.0%
TGCCGCATACCCATCACTAG+AGG + tig0019461:125667-125686 Msa1373700:five_prime_UTR 55.0%
ACACTGCTACAAGCTGACCG+AGG - tig0019461:126137-126156 None:intergenic 55.0%
AAACTGGGATACCAGGAGGC+AGG - tig0019461:126346-126365 None:intergenic 55.0%
AGACAGTCCCTTGTAAGGGC+AGG - tig0019461:127150-127169 None:intergenic 55.0%
! CTCTCCCTCCTCGAGTTGTT+TGG + tig0019461:127202-127221 Msa1373700:intron 55.0%
AGGTCGAACTGTCCGGTAAC+TGG + tig0019461:127286-127305 Msa1373700:intron 55.0%
GGAGTAGCATCCCATCTCCC+TGG - tig0019461:122590-122609 None:intergenic 60.0%
TCAACCAACCTCCCTGGCGT+CGG - tig0019461:122671-122690 None:intergenic 60.0%
GATTCTGATGCTACCCCGGG+TGG + tig0019461:122689-122708 Msa1373700:five_prime_UTR 60.0%
! ACCAGGTGTTACACCACCCG+GGG - tig0019461:122705-122724 None:intergenic 60.0%
! CACCAGGTGTTACACCACCC+GGG - tig0019461:122706-122725 None:intergenic 60.0%
! CCACCAGGTGTTACACCACC+CGG - tig0019461:122707-122726 None:intergenic 60.0%
!! ACACCTGGTGGTGTCACACC+TGG + tig0019461:122716-122735 Msa1373700:five_prime_UTR 60.0%
GCATCCCAAGTAGCACCACC+AGG - tig0019461:122737-122756 None:intergenic 60.0%
CCAGGTGTATACGCAGCAGC+AGG - tig0019461:122869-122888 None:intergenic 60.0%
CCTGCTGCTGCGTATACACC+TGG + tig0019461:122866-122885 Msa1373700:five_prime_UTR 60.0%
!! AAGGCTCGCGAGTTTGGTGC+TGG + tig0019461:123385-123404 Msa1373700:five_prime_UTR 60.0%
!! AGGCTCGCGAGTTTGGTGCT+GGG + tig0019461:123386-123405 Msa1373700:five_prime_UTR 60.0%
ACTATGCCCGTGTTGAGGGG+AGG + tig0019461:123581-123600 Msa1373700:five_prime_UTR 60.0%
CTATGCCCGTGTTGAGGGGA+GGG + tig0019461:123582-123601 Msa1373700:five_prime_UTR 60.0%
TCTTGGCAAGCTCGGCACAC+TGG + tig0019461:123790-123809 Msa1373700:five_prime_UTR 60.0%
CTTGGCAAGCTCGGCACACT+GGG + tig0019461:123791-123810 Msa1373700:five_prime_UTR 60.0%
GCTGAAGCTGCTGCTCCCTA+CGG + tig0019461:123958-123977 Msa1373700:five_prime_UTR 60.0%
GCAACACCGTGGTAAGGTGC+TGG + tig0019461:124029-124048 Msa1373700:five_prime_UTR 60.0%
ACGCAGCCAGCACCTTACCA+CGG - tig0019461:124038-124057 None:intergenic 60.0%
! GAAGCAGTGTGTGAGCACCG+AGG + tig0019461:124197-124216 Msa1373700:five_prime_UTR 60.0%
CAGGACATCCTGTGGACCGA+TGG - tig0019461:125087-125106 None:intergenic 60.0%
CATCGGTCCACAGGATGTCC+TGG + tig0019461:125085-125104 Msa1373700:five_prime_UTR 60.0%
TGCCGTGAAGCACATGGCAC+TGG + tig0019461:125394-125413 Msa1373700:five_prime_UTR 60.0%
GCCGTGAAGCACATGGCACT+GGG + tig0019461:125395-125414 Msa1373700:five_prime_UTR 60.0%
! GAAGCACATGGCACTGGGAG+TGG + tig0019461:125400-125419 Msa1373700:five_prime_UTR 60.0%
!! GCACTGGGAGTGGCTGGTTT+GGG + tig0019461:125410-125429 Msa1373700:five_prime_UTR 60.0%
GGGCAGGGTGGAACAATCCT+TGG - tig0019461:125580-125599 None:intergenic 60.0%
TCCACCCTGCCCGGAAAGTT+AGG + tig0019461:125588-125607 Msa1373700:five_prime_UTR 60.0%
CCACCCTGCCCGGAAAGTTA+GGG + tig0019461:125589-125608 Msa1373700:five_prime_UTR 60.0%
CCTCCCTAACTTTCCGGGCA+GGG - tig0019461:125595-125614 None:intergenic 60.0%
ACCTCCCTAACTTTCCGGGC+AGG - tig0019461:125596-125615 None:intergenic 60.0%
ATAGCCACCTTCCTGCCTCC+TGG + tig0019461:126332-126351 Msa1373700:intron 60.0%
GATACCAGGAGGCAGGAAGG+TGG - tig0019461:126339-126358 None:intergenic 60.0%
TGGGATACCAGGAGGCAGGA+AGG - tig0019461:126342-126361 None:intergenic 60.0%
TGGTAAGGCTGCGCCTGTGC+AGG + tig0019461:122430-122449 Msa1373700:five_prime_UTR 65.0%
TGGGATGAGACACCGACGCC+AGG + tig0019461:122656-122675 Msa1373700:five_prime_UTR 65.0%
GGGATGAGACACCGACGCCA+GGG + tig0019461:122657-122676 Msa1373700:five_prime_UTR 65.0%
ATGAGACACCGACGCCAGGG+AGG + tig0019461:122660-122679 Msa1373700:five_prime_UTR 65.0%
ACCCCGGGTGGTGTAACACC+TGG + tig0019461:122701-122720 Msa1373700:five_prime_UTR 65.0%
CCGGGTGGTGTAACACCTGG+TGG + tig0019461:122704-122723 Msa1373700:five_prime_UTR 65.0%
CCACCAGGTGTGACACCACC+AGG - tig0019461:122722-122741 None:intergenic 65.0%
!! CCTGGTGGTGTCACACCTGG+TGG + tig0019461:122719-122738 Msa1373700:five_prime_UTR 65.0%
GCAGCAGCAGGTGTAGCACC+AGG - tig0019461:122857-122876 None:intergenic 65.0%
!! GTGTGTGAGCACCGAGGGTG+TGG + tig0019461:124203-124222 Msa1373700:five_prime_UTR 65.0%
! CACATGGCACTGGGAGTGGC+TGG + tig0019461:125404-125423 Msa1373700:five_prime_UTR 65.0%
! GGCACTGGGAGTGGCTGGTT+TGG + tig0019461:125409-125428 Msa1373700:five_prime_UTR 65.0%
CCCTAACTTTCCGGGCAGGG+TGG - tig0019461:125592-125611 None:intergenic 65.0%
CCCTGCCCGGAAAGTTAGGG+AGG + tig0019461:125592-125611 Msa1373700:five_prime_UTR 65.0%
GGCTGCGCCTGTGCAGGAGA+AGG + tig0019461:122436-122455 Msa1373700:five_prime_UTR 70.0%
GACACCGACGCCAGGGAGGT+TGG + tig0019461:122664-122683 Msa1373700:five_prime_UTR 70.0%
AGCGGAGTCCCCAACGGCGT+AGG - tig0019461:123127-123146 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0019461 gene 121848 127593 121848 ID=Msa1373700;Name=Msa1373700
tig0019461 mRNA 121848 127593 121848 ID=Msa1373700-mRNA-1;Parent=Msa1373700;Name=Msa1373700-mRNA-1;_AED=0.09;_eAED=0.09;_QI=3905|0.25|0.4|1|0.75|0.8|5|267|127
tig0019461 exon 121848 125760 121848 ID=Msa1373700-mRNA-1:exon:3415;Parent=Msa1373700-mRNA-1
tig0019461 exon 126238 126243 126238 ID=Msa1373700-mRNA-1:exon:3416;Parent=Msa1373700-mRNA-1
tig0019461 exon 126791 127010 126791 ID=Msa1373700-mRNA-1:exon:3417;Parent=Msa1373700-mRNA-1
tig0019461 exon 127080 127190 127080 ID=Msa1373700-mRNA-1:exon:3418;Parent=Msa1373700-mRNA-1
tig0019461 exon 127288 127593 127288 ID=Msa1373700-mRNA-1:exon:3419;Parent=Msa1373700-mRNA-1
tig0019461 five_prime_UTR 121848 125752 121848 ID=Msa1373700-mRNA-1:five_prime_utr;Parent=Msa1373700-mRNA-1
tig0019461 CDS 125753 125760 125753 ID=Msa1373700-mRNA-1:cds;Parent=Msa1373700-mRNA-1
tig0019461 CDS 126238 126243 126238 ID=Msa1373700-mRNA-1:cds;Parent=Msa1373700-mRNA-1
tig0019461 CDS 126791 127010 126791 ID=Msa1373700-mRNA-1:cds;Parent=Msa1373700-mRNA-1
tig0019461 CDS 127080 127190 127080 ID=Msa1373700-mRNA-1:cds;Parent=Msa1373700-mRNA-1
tig0019461 CDS 127288 127326 127288 ID=Msa1373700-mRNA-1:cds;Parent=Msa1373700-mRNA-1
tig0019461 three_prime_UTR 127327 127593 127327 ID=Msa1373700-mRNA-1:three_prime_utr;Parent=Msa1373700-mRNA-1
Gene Sequence

>Msa1373700

ATGTATTGGCTACACTGGAGGAGCATGAAGCGTGTTCAATCTTTTCCTTCTCACATGCTTCCTGTTGGGAGGTTCCACAAGTTTGGCAGATTCAAGCATCACAACTGTTGGAGCAGTGCAATTTTTGTTCAAAATCTTTCTTCTCACACATGTCCTCTTTCCAATTTGGTCATTATAAACAGCTTGGATAGTGAATTTATAGGATTTCCTTGCATAGTGTGTGATTTGCTCTACCCATTGTTCTCAAAGTTTACCTTTGGTCTACAGCGTGGTTTAGGTGATGAGTTTAGGTGCTGCAATACCTGCCCTTACAAGGGACTGTCTGCCTTCAAAATGGGGAAGAAGGTCGAACTGTCCGGTAACTGGCTTGCTGCAGAAATATGA
Protein sequence

>Msa1373700

MYWLHWRSMKRVQSFPSHMLPVGRFHKFGRFKHHNCWSSAIFVQNLSSHTCPLSNLVIINSLDSEFIGFPCIVCDLLYPLFSKFTFGLQRGLGDEFRCCNTCPYKGLSAFKMGKKVELSGNWLAAEI*